HEADER APOPTOSIS 03-APR-07 2YRU TITLE SOLUTION STRUCTURE OF MOUSE STEROID RECEPTOR RNA ACTIVATOR 1 (SRA1) TITLE 2 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: STEROID RECEPTOR RNA ACTIVATOR 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SRA1 DOMAIN, UNP RESIDUES 90-194; COMPND 5 SYNONYM: STEROID RECEPTOR RNA ACTIVATOR PROTEIN, SRAP; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: SRA1; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P051025-17; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS SRAP, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 2 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI, APOPTOSIS EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR N.NAMEKI,K.SAITO,S.KOSHIBA,T.KIGAWA,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 16-MAR-22 2YRU 1 REMARK SEQADV REVDAT 2 24-FEB-09 2YRU 1 VERSN REVDAT 1 08-APR-08 2YRU 0 JRNL AUTH N.NAMEKI,K.SAITO,S.KOSHIBA,T.KIGAWA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF MOUSE STEROID RECEPTOR RNA ACTIVATOR 1 JRNL TITL 2 (SRA1) PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 1.1 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YRU COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000027054. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.2MM SAMPLE U-15N,13C; 20MM D REMARK 210 -TRIS-HCL; 100MM NACL; 1MM D-DTT; REMARK 210 0.02% NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 1.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 47 H GLN A 51 1.52 REMARK 500 O LEU A 26 H HIS A 30 1.52 REMARK 500 O ALA A 66 H GLN A 70 1.53 REMARK 500 O ARG A 49 H ALA A 53 1.54 REMARK 500 O LEU A 19 H GLU A 23 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 -58.44 -150.87 REMARK 500 1 SER A 3 84.10 48.37 REMARK 500 1 SER A 5 86.97 58.25 REMARK 500 1 THR A 13 156.96 58.19 REMARK 500 1 HIS A 32 -67.05 -168.80 REMARK 500 1 HIS A 75 0.13 84.71 REMARK 500 1 GLN A 76 67.10 -67.66 REMARK 500 1 ASP A 90 -69.29 -95.69 REMARK 500 1 SER A 96 172.62 -51.57 REMARK 500 1 TRP A 98 -43.38 -168.73 REMARK 500 1 SER A 117 136.15 63.25 REMARK 500 2 SER A 2 -59.62 -123.91 REMARK 500 2 SER A 3 168.18 62.71 REMARK 500 2 GLU A 10 -77.39 -161.93 REMARK 500 2 SER A 11 93.20 55.80 REMARK 500 2 GLU A 12 39.84 -174.11 REMARK 500 2 HIS A 32 -86.18 -87.49 REMARK 500 2 THR A 33 140.92 -39.95 REMARK 500 2 LYS A 34 172.85 -47.76 REMARK 500 2 HIS A 75 -1.25 86.95 REMARK 500 2 GLN A 76 70.12 -67.11 REMARK 500 2 ASP A 90 -68.41 -95.53 REMARK 500 2 GLU A 94 -61.61 -90.31 REMARK 500 2 GLN A 97 1.73 85.90 REMARK 500 2 TRP A 98 -43.73 -166.45 REMARK 500 2 SER A 116 -58.42 -126.97 REMARK 500 2 SER A 117 91.36 57.77 REMARK 500 3 SER A 3 169.53 59.90 REMARK 500 3 SER A 6 170.50 56.16 REMARK 500 3 SER A 11 -55.33 -164.12 REMARK 500 3 HIS A 32 -78.34 -153.01 REMARK 500 3 HIS A 75 -0.06 85.08 REMARK 500 3 GLN A 76 66.25 -67.87 REMARK 500 3 ASP A 90 -69.85 -95.57 REMARK 500 3 SER A 96 171.86 -53.54 REMARK 500 3 GLN A 97 -0.23 76.36 REMARK 500 3 TRP A 98 -44.37 -164.00 REMARK 500 3 MET A 99 -35.05 -35.19 REMARK 500 3 SER A 116 125.46 61.59 REMARK 500 4 SER A 2 139.05 179.45 REMARK 500 4 SER A 5 111.59 -178.38 REMARK 500 4 SER A 6 98.83 -169.11 REMARK 500 4 ILE A 9 141.88 62.36 REMARK 500 4 GLU A 27 -33.07 -37.67 REMARK 500 4 HIS A 32 -74.87 -159.15 REMARK 500 4 HIS A 75 -7.33 89.90 REMARK 500 4 GLN A 76 84.22 -64.62 REMARK 500 4 ASP A 90 -69.46 -95.29 REMARK 500 4 GLU A 94 -61.65 -95.63 REMARK 500 4 GLN A 97 4.80 85.64 REMARK 500 REMARK 500 THIS ENTRY HAS 261 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT007014914.1 RELATED DB: TARGETDB DBREF 2YRU A 8 112 UNP Q80VJ2 SRA1_MOUSE 90 194 SEQADV 2YRU GLY A 1 UNP Q80VJ2 EXPRESSION TAG SEQADV 2YRU SER A 2 UNP Q80VJ2 EXPRESSION TAG SEQADV 2YRU SER A 3 UNP Q80VJ2 EXPRESSION TAG SEQADV 2YRU GLY A 4 UNP Q80VJ2 EXPRESSION TAG SEQADV 2YRU SER A 5 UNP Q80VJ2 EXPRESSION TAG SEQADV 2YRU SER A 6 UNP Q80VJ2 EXPRESSION TAG SEQADV 2YRU GLY A 7 UNP Q80VJ2 EXPRESSION TAG SEQADV 2YRU SER A 113 UNP Q80VJ2 EXPRESSION TAG SEQADV 2YRU GLY A 114 UNP Q80VJ2 EXPRESSION TAG SEQADV 2YRU PRO A 115 UNP Q80VJ2 EXPRESSION TAG SEQADV 2YRU SER A 116 UNP Q80VJ2 EXPRESSION TAG SEQADV 2YRU SER A 117 UNP Q80VJ2 EXPRESSION TAG SEQADV 2YRU GLY A 118 UNP Q80VJ2 EXPRESSION TAG SEQRES 1 A 118 GLY SER SER GLY SER SER GLY VAL ILE GLU SER GLU THR SEQRES 2 A 118 LEU ILE GLU ASP VAL LEU ARG PRO LEU GLU GLN ALA LEU SEQRES 3 A 118 GLU ASP CYS HIS GLY HIS THR LYS LYS GLN VAL CYS ASP SEQRES 4 A 118 ASP ILE SER ARG ARG LEU ALA LEU LEU ARG GLU GLN TRP SEQRES 5 A 118 ALA GLY GLY LYS LEU SER ILE PRO VAL LYS LYS ARG MET SEQRES 6 A 118 ALA LEU LEU VAL GLN GLU LEU LEU HIS HIS GLN TRP ASP SEQRES 7 A 118 ALA ALA ASP ASP ILE HIS ARG SER LEU MET VAL ASP HIS SEQRES 8 A 118 VAL THR GLU VAL SER GLN TRP MET VAL GLY VAL LYS ARG SEQRES 9 A 118 LEU ILE ALA GLU LYS LYS SER LEU SER GLY PRO SER SER SEQRES 10 A 118 GLY HELIX 1 1 LEU A 14 GLY A 31 1 18 HELIX 2 2 LYS A 34 GLY A 55 1 22 HELIX 3 3 SER A 58 HIS A 75 1 18 HELIX 4 4 GLN A 76 ASP A 90 1 15 HELIX 5 5 HIS A 91 SER A 96 1 6 HELIX 6 6 TRP A 98 GLY A 114 1 17 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1