data_2YRZ # _entry.id 2YRZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YRZ pdb_00002yrz 10.2210/pdb2yrz/pdb RCSB RCSB027059 ? ? WWPDB D_1000027059 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hso002002365.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 2YRZ _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2007-04-03 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Abe, H.' 1 'Sasagawa, A.' 2 'Tochio, N.' 3 'Koshiba, S.' 4 'Inoue, M.' 5 'Kigawa, T.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the fibronectin type III domain of human Integrin beta-4' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Abe, H.' 1 ? primary 'Sasagawa, A.' 2 ? primary 'Tochio, N.' 3 ? primary 'Koshiba, S.' 4 ? primary 'Inoue, M.' 5 ? primary 'Kigawa, T.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Integrin beta-4' _entity.formula_weight 12786.035 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment fn3 _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'GP150, CD104 antigen' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGSHDSRLTAGVPDTPTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRLNIPNPAQTSVVVEDL LPNHSYVFRVRAQSQEGWGREREGVITIESQVSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGSHDSRLTAGVPDTPTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRLNIPNPAQTSVVVEDL LPNHSYVFRVRAQSQEGWGREREGVITIESQVSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hso002002365.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 SER n 1 9 HIS n 1 10 ASP n 1 11 SER n 1 12 ARG n 1 13 LEU n 1 14 THR n 1 15 ALA n 1 16 GLY n 1 17 VAL n 1 18 PRO n 1 19 ASP n 1 20 THR n 1 21 PRO n 1 22 THR n 1 23 ARG n 1 24 LEU n 1 25 VAL n 1 26 PHE n 1 27 SER n 1 28 ALA n 1 29 LEU n 1 30 GLY n 1 31 PRO n 1 32 THR n 1 33 SER n 1 34 LEU n 1 35 ARG n 1 36 VAL n 1 37 SER n 1 38 TRP n 1 39 GLN n 1 40 GLU n 1 41 PRO n 1 42 ARG n 1 43 CYS n 1 44 GLU n 1 45 ARG n 1 46 PRO n 1 47 LEU n 1 48 GLN n 1 49 GLY n 1 50 TYR n 1 51 SER n 1 52 VAL n 1 53 GLU n 1 54 TYR n 1 55 GLN n 1 56 LEU n 1 57 LEU n 1 58 ASN n 1 59 GLY n 1 60 GLY n 1 61 GLU n 1 62 LEU n 1 63 HIS n 1 64 ARG n 1 65 LEU n 1 66 ASN n 1 67 ILE n 1 68 PRO n 1 69 ASN n 1 70 PRO n 1 71 ALA n 1 72 GLN n 1 73 THR n 1 74 SER n 1 75 VAL n 1 76 VAL n 1 77 VAL n 1 78 GLU n 1 79 ASP n 1 80 LEU n 1 81 LEU n 1 82 PRO n 1 83 ASN n 1 84 HIS n 1 85 SER n 1 86 TYR n 1 87 VAL n 1 88 PHE n 1 89 ARG n 1 90 VAL n 1 91 ARG n 1 92 ALA n 1 93 GLN n 1 94 SER n 1 95 GLN n 1 96 GLU n 1 97 GLY n 1 98 TRP n 1 99 GLY n 1 100 ARG n 1 101 GLU n 1 102 ARG n 1 103 GLU n 1 104 GLY n 1 105 VAL n 1 106 ILE n 1 107 THR n 1 108 ILE n 1 109 GLU n 1 110 SER n 1 111 GLN n 1 112 VAL n 1 113 SER n 1 114 GLY n 1 115 PRO n 1 116 SER n 1 117 SER n 1 118 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ITGB4 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050322-10 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ITB4_HUMAN _struct_ref.pdbx_db_accession P16144 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SHDSRLTAGVPDTPTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRLNIPNPAQTSVVVEDLLPNHSYV FRVRAQSQEGWGREREGVITIESQV ; _struct_ref.pdbx_align_begin 1518 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YRZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 112 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P16144 _struct_ref_seq.db_align_beg 1518 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1622 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 112 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YRZ GLY A 1 ? UNP P16144 ? ? 'expression tag' 1 1 1 2YRZ SER A 2 ? UNP P16144 ? ? 'expression tag' 2 2 1 2YRZ SER A 3 ? UNP P16144 ? ? 'expression tag' 3 3 1 2YRZ GLY A 4 ? UNP P16144 ? ? 'expression tag' 4 4 1 2YRZ SER A 5 ? UNP P16144 ? ? 'expression tag' 5 5 1 2YRZ SER A 6 ? UNP P16144 ? ? 'expression tag' 6 6 1 2YRZ GLY A 7 ? UNP P16144 ? ? 'expression tag' 7 7 1 2YRZ SER A 113 ? UNP P16144 ? ? 'expression tag' 113 8 1 2YRZ GLY A 114 ? UNP P16144 ? ? 'expression tag' 114 9 1 2YRZ PRO A 115 ? UNP P16144 ? ? 'expression tag' 115 10 1 2YRZ SER A 116 ? UNP P16144 ? ? 'expression tag' 116 11 1 2YRZ SER A 117 ? UNP P16144 ? ? 'expression tag' 117 12 1 2YRZ GLY A 118 ? UNP P16144 ? ? 'expression tag' 118 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_13C-separated_NOESY 2 1 1 3D_15N-separated_NOESY # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 296 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.21mM sample U-15N,13C; 20mM d-Tris-HCl; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.field_strength 900 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.entry_id 2YRZ _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, target function' _pdbx_nmr_ensemble.entry_id 2YRZ _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' _pdbx_nmr_representative.entry_id 2YRZ # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20030801 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9820 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.method 'SOLUTION NMR' _exptl.entry_id 2YRZ _exptl.crystals_number ? # _struct.entry_id 2YRZ _struct.title 'Solution structure of the fibronectin type III domain of human Integrin beta-4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YRZ _struct_keywords.text ;GP150, CD104 antigen, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, CELL ADHESION ; _struct_keywords.pdbx_keywords 'CELL ADHESION' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 25 ? PHE A 26 ? VAL A 25 PHE A 26 A 2 SER A 33 ? SER A 37 ? SER A 33 SER A 37 A 3 SER A 74 ? GLU A 78 ? SER A 74 GLU A 78 B 1 LEU A 62 ? ILE A 67 ? LEU A 62 ILE A 67 B 2 LEU A 47 ? GLN A 55 ? LEU A 47 GLN A 55 B 3 SER A 85 ? SER A 94 ? SER A 85 SER A 94 B 4 TRP A 98 ? THR A 107 ? TRP A 98 THR A 107 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 25 ? N VAL A 25 O SER A 37 ? O SER A 37 A 2 3 N VAL A 36 ? N VAL A 36 O VAL A 75 ? O VAL A 75 B 1 2 O LEU A 65 ? O LEU A 65 N VAL A 52 ? N VAL A 52 B 2 3 N GLU A 53 ? N GLU A 53 O ARG A 89 ? O ARG A 89 B 3 4 N PHE A 88 ? N PHE A 88 O GLY A 104 ? O GLY A 104 # _atom_sites.entry_id 2YRZ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 HIS 9 9 9 HIS HIS A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 TRP 38 38 38 TRP TRP A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 CYS 43 43 43 CYS CYS A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 HIS 63 63 63 HIS HIS A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 ASN 66 66 66 ASN ASN A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 PRO 68 68 68 PRO PRO A . n A 1 69 ASN 69 69 69 ASN ASN A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 GLN 72 72 72 GLN GLN A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 HIS 84 84 84 HIS HIS A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 TYR 86 86 86 TYR TYR A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 ARG 91 91 91 ARG ARG A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 GLN 93 93 93 GLN GLN A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 GLN 95 95 95 GLN GLN A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 TRP 98 98 98 TRP TRP A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 ARG 100 100 100 ARG ARG A . n A 1 101 GLU 101 101 101 GLU GLU A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 GLN 111 111 111 GLN GLN A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 SER 113 113 113 SER SER A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 PRO 115 115 115 PRO PRO A . n A 1 116 SER 116 116 116 SER SER A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 GLY 118 118 118 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-04-08 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' 5 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 8 ? ? -42.97 166.02 2 1 HIS A 9 ? ? -97.73 43.56 3 1 SER A 11 ? ? -134.02 -34.40 4 1 LEU A 13 ? ? -44.96 152.42 5 1 ARG A 23 ? ? -43.36 159.90 6 1 GLU A 40 ? ? -45.77 104.42 7 1 CYS A 43 ? ? -165.97 116.07 8 1 PRO A 68 ? ? -69.72 3.03 9 1 GLN A 95 ? ? -39.01 -28.47 10 1 SER A 113 ? ? -108.70 42.63 11 1 PRO A 115 ? ? -69.73 -179.11 12 2 SER A 3 ? ? 38.20 42.20 13 2 ASP A 10 ? ? -111.92 59.55 14 2 SER A 11 ? ? -71.23 -71.24 15 2 ARG A 12 ? ? -81.49 44.83 16 2 ASP A 19 ? ? -52.84 174.25 17 2 THR A 22 ? ? -56.13 172.92 18 2 ARG A 23 ? ? -44.43 160.85 19 2 GLU A 40 ? ? -48.61 105.97 20 2 PRO A 68 ? ? -69.76 3.75 21 2 PRO A 115 ? ? -69.71 2.50 22 2 SER A 116 ? ? -34.50 132.97 23 2 SER A 117 ? ? -39.90 138.99 24 3 SER A 3 ? ? -35.34 116.79 25 3 SER A 6 ? ? 34.39 44.28 26 3 ARG A 23 ? ? -49.92 154.97 27 3 GLU A 40 ? ? -52.10 107.45 28 3 CYS A 43 ? ? -172.46 114.97 29 3 PRO A 68 ? ? -69.73 2.92 30 3 THR A 73 ? ? -95.94 33.89 31 4 THR A 20 ? ? -37.79 126.35 32 4 THR A 22 ? ? -48.67 177.14 33 4 GLU A 40 ? ? -46.94 106.96 34 4 LEU A 56 ? ? -39.87 118.82 35 4 PRO A 68 ? ? -69.78 3.35 36 4 THR A 73 ? ? -98.43 35.97 37 5 SER A 2 ? ? -51.47 98.89 38 5 SER A 5 ? ? -100.63 43.81 39 5 SER A 11 ? ? -38.63 149.86 40 5 ARG A 12 ? ? -37.08 149.07 41 5 LEU A 13 ? ? -86.77 35.22 42 5 ASP A 19 ? ? -57.92 170.30 43 5 ARG A 23 ? ? -41.36 155.80 44 5 GLU A 40 ? ? -49.54 106.38 45 5 CYS A 43 ? ? -162.38 111.52 46 5 PRO A 68 ? ? -69.74 3.13 47 5 THR A 73 ? ? -97.46 32.81 48 5 SER A 113 ? ? -94.71 42.36 49 5 PRO A 115 ? ? -69.70 88.09 50 6 ASP A 19 ? ? -51.45 175.64 51 6 ARG A 23 ? ? -46.18 171.97 52 6 LEU A 56 ? ? -36.83 118.20 53 6 PRO A 68 ? ? -69.73 3.02 54 6 THR A 73 ? ? -97.76 31.27 55 7 HIS A 9 ? ? -83.67 47.79 56 7 ALA A 15 ? ? -125.23 -51.66 57 7 GLU A 40 ? ? -46.76 104.96 58 7 CYS A 43 ? ? -172.08 119.75 59 7 PRO A 68 ? ? -69.84 3.16 60 7 THR A 73 ? ? -99.85 32.94 61 7 GLN A 111 ? ? -103.10 42.26 62 7 PRO A 115 ? ? -69.74 98.50 63 8 ARG A 23 ? ? -46.94 157.63 64 8 GLU A 40 ? ? -46.46 106.05 65 8 PRO A 68 ? ? -69.79 2.03 66 8 SER A 116 ? ? -62.32 93.75 67 9 THR A 22 ? ? -52.36 174.09 68 9 ARG A 23 ? ? -49.74 164.41 69 9 GLU A 40 ? ? -40.77 104.61 70 9 CYS A 43 ? ? -166.49 118.89 71 9 PRO A 68 ? ? -69.72 2.95 72 9 THR A 73 ? ? -98.34 31.87 73 9 SER A 110 ? ? -93.23 49.27 74 10 ASP A 10 ? ? -93.90 41.62 75 10 ASP A 19 ? ? -48.88 177.96 76 10 ARG A 23 ? ? -46.55 157.92 77 10 GLU A 40 ? ? -50.78 106.88 78 10 PRO A 68 ? ? -69.81 3.14 79 10 THR A 73 ? ? -97.20 34.20 80 10 GLN A 95 ? ? -39.53 -36.93 81 10 GLN A 111 ? ? -96.95 39.77 82 10 PRO A 115 ? ? -69.75 2.71 83 10 SER A 116 ? ? -34.60 139.43 84 11 SER A 3 ? ? -36.75 136.48 85 11 HIS A 9 ? ? -169.43 116.76 86 11 ARG A 23 ? ? -46.89 158.54 87 11 LEU A 56 ? ? -38.93 115.84 88 11 PRO A 68 ? ? -69.79 4.49 89 12 SER A 6 ? ? -55.64 103.80 90 12 ALA A 15 ? ? -126.32 -57.69 91 12 THR A 22 ? ? -51.29 171.54 92 12 ARG A 23 ? ? -44.51 153.96 93 12 GLU A 40 ? ? -42.14 102.44 94 12 CYS A 43 ? ? -166.05 118.63 95 12 GLU A 61 ? ? -45.30 159.24 96 12 PRO A 68 ? ? -69.73 2.79 97 12 THR A 73 ? ? -98.97 32.02 98 13 ARG A 12 ? ? -68.70 92.31 99 13 THR A 14 ? ? -34.42 113.15 100 13 THR A 22 ? ? -57.47 175.68 101 13 ARG A 23 ? ? -49.89 154.95 102 13 LEU A 29 ? ? -38.12 -29.29 103 13 GLU A 40 ? ? -33.93 107.32 104 13 LEU A 56 ? ? -35.48 117.52 105 13 PRO A 68 ? ? -69.76 4.17 106 14 ASP A 10 ? ? -101.31 53.09 107 14 ARG A 23 ? ? -48.31 160.32 108 14 LEU A 29 ? ? -39.96 -27.98 109 14 GLU A 40 ? ? -35.23 114.27 110 14 PRO A 41 ? ? -69.77 -163.61 111 14 CYS A 43 ? ? -162.12 115.63 112 14 PRO A 68 ? ? -69.76 2.92 113 14 THR A 73 ? ? -97.16 31.29 114 14 SER A 110 ? ? -120.76 -52.79 115 14 GLN A 111 ? ? -66.89 90.96 116 14 SER A 117 ? ? -88.30 41.01 117 15 THR A 14 ? ? -33.99 139.27 118 15 THR A 22 ? ? -54.57 172.69 119 15 ARG A 23 ? ? -47.43 175.84 120 15 GLU A 40 ? ? -48.91 106.04 121 15 CYS A 43 ? ? -166.61 108.29 122 15 PRO A 68 ? ? -69.75 3.81 123 15 THR A 73 ? ? -96.79 35.00 124 15 GLN A 95 ? ? -34.06 -36.56 125 15 SER A 110 ? ? -94.61 -61.97 126 15 SER A 117 ? ? -34.46 125.39 127 16 THR A 14 ? ? -37.14 138.17 128 16 ALA A 15 ? ? -83.75 31.21 129 16 ARG A 23 ? ? -41.82 163.72 130 16 GLU A 40 ? ? -40.60 102.68 131 16 CYS A 43 ? ? -168.15 112.05 132 16 PRO A 68 ? ? -69.78 4.52 133 16 THR A 73 ? ? -98.06 32.59 134 16 PRO A 115 ? ? -69.73 94.46 135 17 LEU A 13 ? ? -48.05 108.57 136 17 ARG A 23 ? ? -43.22 163.45 137 17 GLU A 40 ? ? -54.42 108.31 138 17 PRO A 41 ? ? -69.78 -179.10 139 17 CYS A 43 ? ? -162.94 118.51 140 17 PRO A 68 ? ? -69.72 3.02 141 17 THR A 73 ? ? -99.43 33.62 142 17 ILE A 108 ? ? -58.42 107.92 143 17 VAL A 112 ? ? 28.97 41.44 144 17 SER A 113 ? ? 34.48 53.10 145 17 SER A 116 ? ? -170.36 133.16 146 18 SER A 5 ? ? -124.79 -50.01 147 18 THR A 14 ? ? -36.50 140.93 148 18 ASP A 19 ? ? -56.28 179.37 149 18 ARG A 23 ? ? -48.65 156.21 150 18 GLU A 40 ? ? -56.60 109.00 151 18 CYS A 43 ? ? -164.55 117.38 152 18 PRO A 68 ? ? -69.76 3.70 153 18 THR A 73 ? ? -98.17 36.22 154 18 GLN A 111 ? ? -118.18 51.51 155 18 VAL A 112 ? ? -88.32 41.52 156 19 HIS A 9 ? ? -51.89 101.32 157 19 SER A 11 ? ? -34.30 -39.86 158 19 ARG A 12 ? ? -65.62 -174.00 159 19 LEU A 13 ? ? 33.71 35.39 160 19 THR A 14 ? ? -33.94 126.66 161 19 ALA A 15 ? ? -129.00 -52.16 162 19 ARG A 23 ? ? -41.85 162.91 163 19 GLU A 40 ? ? -50.54 107.29 164 19 CYS A 43 ? ? -164.74 110.14 165 19 PRO A 68 ? ? -69.72 3.37 166 19 THR A 73 ? ? -97.05 31.74 167 19 GLN A 95 ? ? -36.79 -39.50 168 19 PRO A 115 ? ? -69.73 2.51 169 19 SER A 117 ? ? 35.91 42.33 170 20 SER A 2 ? ? -99.32 42.20 171 20 SER A 5 ? ? -41.73 159.14 172 20 ARG A 12 ? ? -62.18 97.80 173 20 GLU A 40 ? ? -42.47 108.22 174 20 PRO A 41 ? ? -69.74 -172.18 175 20 GLU A 61 ? ? -47.58 169.09 176 20 PRO A 68 ? ? -69.81 2.56 177 20 GLN A 95 ? ? -37.89 -35.93 178 20 GLN A 111 ? ? -119.00 54.57 #