data_2YS7 # _entry.id 2YS7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YS7 pdb_00002ys7 10.2210/pdb2ys7/pdb RCSB RCSB027067 ? ? WWPDB D_1000027067 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2YRW 'GAR synthetase from Geobacillus kaustophilus' unspecified TargetDB gka001000268.4 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YS7 _pdbx_database_status.recvd_initial_deposition_date 2007-04-03 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Baba, S.' 1 'Kanagawa, M.' 2 'Kuramitsu, S.' 3 'Yokoyama, S.' 4 'Kawai, G.' 5 'Sampei, G.' 6 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 7 # _citation.id primary _citation.title 'Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria' _citation.journal_abbrev J.Biochem. _citation.journal_volume 148 _citation.page_first 429 _citation.page_last 438 _citation.year 2010 _citation.journal_id_ASTM ? _citation.country JP _citation.journal_id_ISSN 0021-924X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20716513 _citation.pdbx_database_id_DOI 10.1093/jb/mvq088 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sampei, G.' 1 ? primary 'Baba, S.' 2 ? primary 'Kanagawa, M.' 3 ? primary 'Yanai, H.' 4 ? primary 'Ishii, T.' 5 ? primary 'Kawai, H.' 6 ? primary 'Fukai, Y.' 7 ? primary 'Ebihara, A.' 8 ? primary 'Nakagawa, N.' 9 ? primary 'Kawai, G.' 10 ? # _cell.entry_id 2YS7 _cell.length_a 51.231 _cell.length_b 83.552 _cell.length_c 94.726 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2YS7 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Phosphoribosylglycinamide synthetase' 48228.781 1 6.3.4.13 ? ? ? 2 water nat water 18.015 160 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Glycinamide ribonucleotide synthetase, Phosphoribosylglycinamide synthetase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGENLYFQSHMNVLVIGRGGREHAIAWKAAQSPLVGKLYVAPGNPGIADVAELVHIDELDIEALVQFAK QQAIDLTIVGPEAPLASGIVDRFMAEGLRIFGPSQRAALIEGSKAFAKELMKKYGIPTADHAAFTSYEEAKAYIEQKGAP IVIKADGLAAGKGVTVAQTVEEALAAAKAALVDGQFGTAGSQVVIEEYLEGEEFSFMAFVNGEKVYPLAIAQDHKRAYDG DEGPNTGGMGAYSPVPQISDEMMDAALEAILRPAAKALAAEGRPFLGVLYAGLMATANGPKVIEFNARFGDPEAQVVLPR LKTDLVEAVLAVMDGKELELEWTDEAVLGVVLAAKGYPGAYERGAEIRGLDRISPDALLFHAGTKREGGAWYTNGGRVLL LAAKGETLAKAKEKAYEQLAAIDCDGLFYRRDIGRRAIERASAAYTRMKGR ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGENLYFQSHMNVLVIGRGGREHAIAWKAAQSPLVGKLYVAPGNPGIADVAELVHIDELDIEALVQFAK QQAIDLTIVGPEAPLASGIVDRFMAEGLRIFGPSQRAALIEGSKAFAKELMKKYGIPTADHAAFTSYEEAKAYIEQKGAP IVIKADGLAAGKGVTVAQTVEEALAAAKAALVDGQFGTAGSQVVIEEYLEGEEFSFMAFVNGEKVYPLAIAQDHKRAYDG DEGPNTGGMGAYSPVPQISDEMMDAALEAILRPAAKALAAEGRPFLGVLYAGLMATANGPKVIEFNARFGDPEAQVVLPR LKTDLVEAVLAVMDGKELELEWTDEAVLGVVLAAKGYPGAYERGAEIRGLDRISPDALLFHAGTKREGGAWYTNGGRVLL LAAKGETLAKAKEKAYEQLAAIDCDGLFYRRDIGRRAIERASAAYTRMKGR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier gka001000268.4 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 GLU n 1 15 ASN n 1 16 LEU n 1 17 TYR n 1 18 PHE n 1 19 GLN n 1 20 SER n 1 21 HIS n 1 22 MET n 1 23 ASN n 1 24 VAL n 1 25 LEU n 1 26 VAL n 1 27 ILE n 1 28 GLY n 1 29 ARG n 1 30 GLY n 1 31 GLY n 1 32 ARG n 1 33 GLU n 1 34 HIS n 1 35 ALA n 1 36 ILE n 1 37 ALA n 1 38 TRP n 1 39 LYS n 1 40 ALA n 1 41 ALA n 1 42 GLN n 1 43 SER n 1 44 PRO n 1 45 LEU n 1 46 VAL n 1 47 GLY n 1 48 LYS n 1 49 LEU n 1 50 TYR n 1 51 VAL n 1 52 ALA n 1 53 PRO n 1 54 GLY n 1 55 ASN n 1 56 PRO n 1 57 GLY n 1 58 ILE n 1 59 ALA n 1 60 ASP n 1 61 VAL n 1 62 ALA n 1 63 GLU n 1 64 LEU n 1 65 VAL n 1 66 HIS n 1 67 ILE n 1 68 ASP n 1 69 GLU n 1 70 LEU n 1 71 ASP n 1 72 ILE n 1 73 GLU n 1 74 ALA n 1 75 LEU n 1 76 VAL n 1 77 GLN n 1 78 PHE n 1 79 ALA n 1 80 LYS n 1 81 GLN n 1 82 GLN n 1 83 ALA n 1 84 ILE n 1 85 ASP n 1 86 LEU n 1 87 THR n 1 88 ILE n 1 89 VAL n 1 90 GLY n 1 91 PRO n 1 92 GLU n 1 93 ALA n 1 94 PRO n 1 95 LEU n 1 96 ALA n 1 97 SER n 1 98 GLY n 1 99 ILE n 1 100 VAL n 1 101 ASP n 1 102 ARG n 1 103 PHE n 1 104 MET n 1 105 ALA n 1 106 GLU n 1 107 GLY n 1 108 LEU n 1 109 ARG n 1 110 ILE n 1 111 PHE n 1 112 GLY n 1 113 PRO n 1 114 SER n 1 115 GLN n 1 116 ARG n 1 117 ALA n 1 118 ALA n 1 119 LEU n 1 120 ILE n 1 121 GLU n 1 122 GLY n 1 123 SER n 1 124 LYS n 1 125 ALA n 1 126 PHE n 1 127 ALA n 1 128 LYS n 1 129 GLU n 1 130 LEU n 1 131 MET n 1 132 LYS n 1 133 LYS n 1 134 TYR n 1 135 GLY n 1 136 ILE n 1 137 PRO n 1 138 THR n 1 139 ALA n 1 140 ASP n 1 141 HIS n 1 142 ALA n 1 143 ALA n 1 144 PHE n 1 145 THR n 1 146 SER n 1 147 TYR n 1 148 GLU n 1 149 GLU n 1 150 ALA n 1 151 LYS n 1 152 ALA n 1 153 TYR n 1 154 ILE n 1 155 GLU n 1 156 GLN n 1 157 LYS n 1 158 GLY n 1 159 ALA n 1 160 PRO n 1 161 ILE n 1 162 VAL n 1 163 ILE n 1 164 LYS n 1 165 ALA n 1 166 ASP n 1 167 GLY n 1 168 LEU n 1 169 ALA n 1 170 ALA n 1 171 GLY n 1 172 LYS n 1 173 GLY n 1 174 VAL n 1 175 THR n 1 176 VAL n 1 177 ALA n 1 178 GLN n 1 179 THR n 1 180 VAL n 1 181 GLU n 1 182 GLU n 1 183 ALA n 1 184 LEU n 1 185 ALA n 1 186 ALA n 1 187 ALA n 1 188 LYS n 1 189 ALA n 1 190 ALA n 1 191 LEU n 1 192 VAL n 1 193 ASP n 1 194 GLY n 1 195 GLN n 1 196 PHE n 1 197 GLY n 1 198 THR n 1 199 ALA n 1 200 GLY n 1 201 SER n 1 202 GLN n 1 203 VAL n 1 204 VAL n 1 205 ILE n 1 206 GLU n 1 207 GLU n 1 208 TYR n 1 209 LEU n 1 210 GLU n 1 211 GLY n 1 212 GLU n 1 213 GLU n 1 214 PHE n 1 215 SER n 1 216 PHE n 1 217 MET n 1 218 ALA n 1 219 PHE n 1 220 VAL n 1 221 ASN n 1 222 GLY n 1 223 GLU n 1 224 LYS n 1 225 VAL n 1 226 TYR n 1 227 PRO n 1 228 LEU n 1 229 ALA n 1 230 ILE n 1 231 ALA n 1 232 GLN n 1 233 ASP n 1 234 HIS n 1 235 LYS n 1 236 ARG n 1 237 ALA n 1 238 TYR n 1 239 ASP n 1 240 GLY n 1 241 ASP n 1 242 GLU n 1 243 GLY n 1 244 PRO n 1 245 ASN n 1 246 THR n 1 247 GLY n 1 248 GLY n 1 249 MET n 1 250 GLY n 1 251 ALA n 1 252 TYR n 1 253 SER n 1 254 PRO n 1 255 VAL n 1 256 PRO n 1 257 GLN n 1 258 ILE n 1 259 SER n 1 260 ASP n 1 261 GLU n 1 262 MET n 1 263 MET n 1 264 ASP n 1 265 ALA n 1 266 ALA n 1 267 LEU n 1 268 GLU n 1 269 ALA n 1 270 ILE n 1 271 LEU n 1 272 ARG n 1 273 PRO n 1 274 ALA n 1 275 ALA n 1 276 LYS n 1 277 ALA n 1 278 LEU n 1 279 ALA n 1 280 ALA n 1 281 GLU n 1 282 GLY n 1 283 ARG n 1 284 PRO n 1 285 PHE n 1 286 LEU n 1 287 GLY n 1 288 VAL n 1 289 LEU n 1 290 TYR n 1 291 ALA n 1 292 GLY n 1 293 LEU n 1 294 MET n 1 295 ALA n 1 296 THR n 1 297 ALA n 1 298 ASN n 1 299 GLY n 1 300 PRO n 1 301 LYS n 1 302 VAL n 1 303 ILE n 1 304 GLU n 1 305 PHE n 1 306 ASN n 1 307 ALA n 1 308 ARG n 1 309 PHE n 1 310 GLY n 1 311 ASP n 1 312 PRO n 1 313 GLU n 1 314 ALA n 1 315 GLN n 1 316 VAL n 1 317 VAL n 1 318 LEU n 1 319 PRO n 1 320 ARG n 1 321 LEU n 1 322 LYS n 1 323 THR n 1 324 ASP n 1 325 LEU n 1 326 VAL n 1 327 GLU n 1 328 ALA n 1 329 VAL n 1 330 LEU n 1 331 ALA n 1 332 VAL n 1 333 MET n 1 334 ASP n 1 335 GLY n 1 336 LYS n 1 337 GLU n 1 338 LEU n 1 339 GLU n 1 340 LEU n 1 341 GLU n 1 342 TRP n 1 343 THR n 1 344 ASP n 1 345 GLU n 1 346 ALA n 1 347 VAL n 1 348 LEU n 1 349 GLY n 1 350 VAL n 1 351 VAL n 1 352 LEU n 1 353 ALA n 1 354 ALA n 1 355 LYS n 1 356 GLY n 1 357 TYR n 1 358 PRO n 1 359 GLY n 1 360 ALA n 1 361 TYR n 1 362 GLU n 1 363 ARG n 1 364 GLY n 1 365 ALA n 1 366 GLU n 1 367 ILE n 1 368 ARG n 1 369 GLY n 1 370 LEU n 1 371 ASP n 1 372 ARG n 1 373 ILE n 1 374 SER n 1 375 PRO n 1 376 ASP n 1 377 ALA n 1 378 LEU n 1 379 LEU n 1 380 PHE n 1 381 HIS n 1 382 ALA n 1 383 GLY n 1 384 THR n 1 385 LYS n 1 386 ARG n 1 387 GLU n 1 388 GLY n 1 389 GLY n 1 390 ALA n 1 391 TRP n 1 392 TYR n 1 393 THR n 1 394 ASN n 1 395 GLY n 1 396 GLY n 1 397 ARG n 1 398 VAL n 1 399 LEU n 1 400 LEU n 1 401 LEU n 1 402 ALA n 1 403 ALA n 1 404 LYS n 1 405 GLY n 1 406 GLU n 1 407 THR n 1 408 LEU n 1 409 ALA n 1 410 LYS n 1 411 ALA n 1 412 LYS n 1 413 GLU n 1 414 LYS n 1 415 ALA n 1 416 TYR n 1 417 GLU n 1 418 GLN n 1 419 LEU n 1 420 ALA n 1 421 ALA n 1 422 ILE n 1 423 ASP n 1 424 CYS n 1 425 ASP n 1 426 GLY n 1 427 LEU n 1 428 PHE n 1 429 TYR n 1 430 ARG n 1 431 ARG n 1 432 ASP n 1 433 ILE n 1 434 GLY n 1 435 ARG n 1 436 ARG n 1 437 ALA n 1 438 ILE n 1 439 GLU n 1 440 ARG n 1 441 ALA n 1 442 SER n 1 443 ALA n 1 444 ALA n 1 445 TYR n 1 446 THR n 1 447 ARG n 1 448 MET n 1 449 LYS n 1 450 GLY n 1 451 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Geobacillus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Geobacillus kaustophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1462 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-HisTEV _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5L3C7_GEOKA _struct_ref.pdbx_db_accession Q5L3C7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNVLVIGRGGREHAIAWKAAQSPLVGKLYVAPGNPGIADVAELVHIDELDIEALVQFAKQQAIDLTIVGPEAPLASGIVD RFMAEGLRIFGPSQRAALIEGSKAFAKELMKKYGIPTADHAAFTSYEEAKAYIEQKGAPIVIKADGLAAGKGVTVAQTVE EALAAAKAALVDGQFGTAGSQVVIEEYLEGEEFSFMAFVNGEKVYPLAIAQDHKRAYDGDEGPNTGGMGAYSPVPQISDE MMDAALEAILRPAAKALAAEGRPFLGVLYAGLMATANGPKVIEFNARFGDPEAQVVLPRLKTDLVEAVLAVMDGKELELE WTDEAVLGVVLAAKGYPGAYERGAEIRGLDRISPDALLFHAGTKREGGAWYTNGGRVLLLAAKGETLAKAKEKAYEQLAA IDCDGLFYRRDIGRRAIERASAAYTRMKGR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YS7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 22 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 451 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5L3C7 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 430 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 430 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YS7 MET A 1 ? UNP Q5L3C7 ? ? 'expression tag' -21 1 1 2YS7 GLY A 2 ? UNP Q5L3C7 ? ? 'expression tag' -20 2 1 2YS7 SER A 3 ? UNP Q5L3C7 ? ? 'expression tag' -19 3 1 2YS7 SER A 4 ? UNP Q5L3C7 ? ? 'expression tag' -18 4 1 2YS7 HIS A 5 ? UNP Q5L3C7 ? ? 'expression tag' -17 5 1 2YS7 HIS A 6 ? UNP Q5L3C7 ? ? 'expression tag' -16 6 1 2YS7 HIS A 7 ? UNP Q5L3C7 ? ? 'expression tag' -15 7 1 2YS7 HIS A 8 ? UNP Q5L3C7 ? ? 'expression tag' -14 8 1 2YS7 HIS A 9 ? UNP Q5L3C7 ? ? 'expression tag' -13 9 1 2YS7 HIS A 10 ? UNP Q5L3C7 ? ? 'expression tag' -12 10 1 2YS7 SER A 11 ? UNP Q5L3C7 ? ? 'expression tag' -11 11 1 2YS7 SER A 12 ? UNP Q5L3C7 ? ? 'expression tag' -10 12 1 2YS7 GLY A 13 ? UNP Q5L3C7 ? ? 'expression tag' -9 13 1 2YS7 GLU A 14 ? UNP Q5L3C7 ? ? 'expression tag' -8 14 1 2YS7 ASN A 15 ? UNP Q5L3C7 ? ? 'expression tag' -7 15 1 2YS7 LEU A 16 ? UNP Q5L3C7 ? ? 'expression tag' -6 16 1 2YS7 TYR A 17 ? UNP Q5L3C7 ? ? 'expression tag' -5 17 1 2YS7 PHE A 18 ? UNP Q5L3C7 ? ? 'expression tag' -4 18 1 2YS7 GLN A 19 ? UNP Q5L3C7 ? ? 'expression tag' -3 19 1 2YS7 SER A 20 ? UNP Q5L3C7 ? ? 'expression tag' -2 20 1 2YS7 HIS A 21 ? UNP Q5L3C7 ? ? 'expression tag' -1 21 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2YS7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.10 _exptl_crystal.density_percent_sol 41.46 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.1M Tris hydrochloride, 2M Ammonium sulfate, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU JUPITER 210' _diffrn_detector.pdbx_collection_date 2006-05-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Fixed exit Si 111 double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL26B1' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL26B1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 2YS7 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.2 _reflns.number_obs 20854 _reflns.number_all ? _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.055 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 22.0 _reflns.pdbx_redundancy 6.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 99.1 _reflns_shell.Rmerge_I_obs 0.151 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 2031 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2YS7 _refine.ls_number_reflns_obs 20565 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 258577.85 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 41.78 _refine.ls_d_res_high 2.21 _refine.ls_percent_reflns_obs 97.7 _refine.ls_R_factor_obs 0.208 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.208 _refine.ls_R_factor_R_free 0.251 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.8 _refine.ls_number_reflns_R_free 2023 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 32.8 _refine.aniso_B[1][1] 0.83 _refine.aniso_B[2][2] 0.76 _refine.aniso_B[3][3] -1.59 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.347525 _refine.solvent_model_param_bsol 48.9059 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 2YRW' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2YS7 _refine_analyze.Luzzati_coordinate_error_obs 0.26 _refine_analyze.Luzzati_sigma_a_obs 0.17 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.33 _refine_analyze.Luzzati_sigma_a_free 0.29 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3102 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 160 _refine_hist.number_atoms_total 3262 _refine_hist.d_res_high 2.21 _refine_hist.d_res_low 41.78 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.5 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.78 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.34 _refine_ls_shell.number_reflns_R_work 2627 _refine_ls_shell.R_factor_R_work 0.233 _refine_ls_shell.percent_reflns_obs 84.3 _refine_ls_shell.R_factor_R_free 0.300 _refine_ls_shell.R_factor_R_free_error 0.017 _refine_ls_shell.percent_reflns_R_free 10.4 _refine_ls_shell.number_reflns_R_free 304 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 ion.param ion.top 'X-RAY DIFFRACTION' 3 water_rep.param water.top 'X-RAY DIFFRACTION' # _struct.entry_id 2YS7 _struct.title 'Crystal structure of GAR synthetase from Geobacillus kaustophilus' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YS7 _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text ;Glycinamide ribonucleotide synthetase, GAR synthetase, ATP binding, Purine nucleotide biosynthetic pathway, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Ligase ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 30 ? ALA A 41 ? GLY A 9 ALA A 20 1 ? 12 HELX_P HELX_P2 2 GLY A 57 ? VAL A 61 ? GLY A 36 VAL A 40 5 ? 5 HELX_P HELX_P3 3 ASP A 71 ? GLN A 82 ? ASP A 50 GLN A 61 1 ? 12 HELX_P HELX_P4 4 PRO A 91 ? SER A 97 ? PRO A 70 SER A 76 1 ? 7 HELX_P HELX_P5 5 GLY A 98 ? ALA A 105 ? GLY A 77 ALA A 84 1 ? 8 HELX_P HELX_P6 6 ALA A 118 ? SER A 123 ? ALA A 97 SER A 102 1 ? 6 HELX_P HELX_P7 7 SER A 123 ? TYR A 134 ? SER A 102 TYR A 113 1 ? 12 HELX_P HELX_P8 8 SER A 146 ? GLY A 158 ? SER A 125 GLY A 137 1 ? 13 HELX_P HELX_P9 9 THR A 179 ? GLY A 194 ? THR A 158 GLY A 173 1 ? 16 HELX_P HELX_P10 10 SER A 259 ? ILE A 270 ? SER A 238 ILE A 249 1 ? 12 HELX_P HELX_P11 11 ILE A 270 ? GLU A 281 ? ILE A 249 GLU A 260 1 ? 12 HELX_P HELX_P12 12 PRO A 312 ? LEU A 318 ? PRO A 291 LEU A 297 1 ? 7 HELX_P HELX_P13 13 PRO A 319 ? LEU A 321 ? PRO A 298 LEU A 300 5 ? 3 HELX_P HELX_P14 14 ASP A 324 ? ASP A 334 ? ASP A 303 ASP A 313 1 ? 11 HELX_P HELX_P15 15 THR A 407 ? ALA A 420 ? THR A 386 ALA A 399 1 ? 14 HELX_P HELX_P16 16 GLY A 434 ? GLU A 439 ? GLY A 413 GLU A 418 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 52 A . ? ALA 31 A PRO 53 A ? PRO 32 A 1 -0.07 2 ALA 159 A . ? ALA 138 A PRO 160 A ? PRO 139 A 1 -0.08 3 SER 253 A . ? SER 232 A PRO 254 A ? PRO 233 A 1 -0.01 4 ASP 311 A . ? ASP 290 A PRO 312 A ? PRO 291 A 1 0.72 5 TYR 357 A . ? TYR 336 A PRO 358 A ? PRO 337 A 1 0.20 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? C ? 4 ? D ? 5 ? E ? 4 ? F ? 2 ? G ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 63 ? LEU A 64 ? GLU A 42 LEU A 43 A 2 VAL A 46 ? PRO A 53 ? VAL A 25 PRO A 32 A 3 MET A 22 ? GLY A 28 ? MET A 1 GLY A 7 A 4 LEU A 86 ? VAL A 89 ? LEU A 65 VAL A 68 A 5 ILE A 110 ? PHE A 111 ? ILE A 89 PHE A 90 B 1 HIS A 141 ? PHE A 144 ? HIS A 120 PHE A 123 B 2 VAL A 203 ? GLU A 207 ? VAL A 182 GLU A 186 B 3 ILE A 161 ? LYS A 164 ? ILE A 140 LYS A 143 B 4 VAL A 174 ? ALA A 177 ? VAL A 153 ALA A 156 C 1 LYS A 224 ? PRO A 227 ? LYS A 203 PRO A 206 C 2 GLU A 212 ? ASN A 221 ? GLU A 191 ASN A 200 C 3 LEU A 286 ? THR A 296 ? LEU A 265 THR A 275 C 4 GLY A 299 ? ASN A 306 ? GLY A 278 ASN A 285 D 1 GLN A 232 ? ASP A 233 ? GLN A 211 ASP A 212 D 2 GLY A 250 ? SER A 253 ? GLY A 229 SER A 232 D 3 ALA A 346 ? ALA A 354 ? ALA A 325 ALA A 333 D 4 ARG A 397 ? GLY A 405 ? ARG A 376 GLY A 384 D 5 LEU A 378 ? HIS A 381 ? LEU A 357 HIS A 360 E 1 GLN A 232 ? ASP A 233 ? GLN A 211 ASP A 212 E 2 GLY A 250 ? SER A 253 ? GLY A 229 SER A 232 E 3 ALA A 346 ? ALA A 354 ? ALA A 325 ALA A 333 E 4 LEU A 427 ? PHE A 428 ? LEU A 406 PHE A 407 F 1 ARG A 236 ? TYR A 238 ? ARG A 215 TYR A 217 F 2 GLU A 242 ? ASN A 245 ? GLU A 221 ASN A 224 G 1 GLU A 366 ? ILE A 367 ? GLU A 345 ILE A 346 G 2 ALA A 390 ? THR A 393 ? ALA A 369 THR A 372 G 3 THR A 384 ? GLU A 387 ? THR A 363 GLU A 366 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU A 63 ? O GLU A 42 N LEU A 49 ? N LEU A 28 A 2 3 O GLY A 47 ? O GLY A 26 N MET A 22 ? N MET A 1 A 3 4 N ILE A 27 ? N ILE A 6 O ILE A 88 ? O ILE A 67 A 4 5 N THR A 87 ? N THR A 66 O PHE A 111 ? O PHE A 90 B 1 2 N ALA A 142 ? N ALA A 121 O ILE A 205 ? O ILE A 184 B 2 3 O VAL A 204 ? O VAL A 183 N LYS A 164 ? N LYS A 143 B 3 4 N ILE A 163 ? N ILE A 142 O THR A 175 ? O THR A 154 C 1 2 O TYR A 226 ? O TYR A 205 N PHE A 219 ? N PHE A 198 C 2 3 N GLU A 212 ? N GLU A 191 O ALA A 295 ? O ALA A 274 C 3 4 N GLY A 292 ? N GLY A 271 O ILE A 303 ? O ILE A 282 D 1 2 N GLN A 232 ? N GLN A 211 O TYR A 252 ? O TYR A 231 D 2 3 N ALA A 251 ? N ALA A 230 O GLY A 349 ? O GLY A 328 D 3 4 N LEU A 352 ? N LEU A 331 O LEU A 399 ? O LEU A 378 D 4 5 O ALA A 402 ? O ALA A 381 N LEU A 378 ? N LEU A 357 E 1 2 N GLN A 232 ? N GLN A 211 O TYR A 252 ? O TYR A 231 E 2 3 N ALA A 251 ? N ALA A 230 O GLY A 349 ? O GLY A 328 E 3 4 N ALA A 353 ? N ALA A 332 O PHE A 428 ? O PHE A 407 F 1 2 N TYR A 238 ? N TYR A 217 O GLU A 242 ? O GLU A 221 G 1 2 N ILE A 367 ? N ILE A 346 O TRP A 391 ? O TRP A 370 G 2 3 O TYR A 392 ? O TYR A 371 N LYS A 385 ? N LYS A 364 # _database_PDB_matrix.entry_id 2YS7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YS7 _atom_sites.fract_transf_matrix[1][1] 0.019519 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011969 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010557 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -21 ? ? ? A . n A 1 2 GLY 2 -20 ? ? ? A . n A 1 3 SER 3 -19 ? ? ? A . n A 1 4 SER 4 -18 ? ? ? A . n A 1 5 HIS 5 -17 ? ? ? A . n A 1 6 HIS 6 -16 ? ? ? A . n A 1 7 HIS 7 -15 ? ? ? A . n A 1 8 HIS 8 -14 ? ? ? A . n A 1 9 HIS 9 -13 ? ? ? A . n A 1 10 HIS 10 -12 ? ? ? A . n A 1 11 SER 11 -11 ? ? ? A . n A 1 12 SER 12 -10 ? ? ? A . n A 1 13 GLY 13 -9 ? ? ? A . n A 1 14 GLU 14 -8 ? ? ? A . n A 1 15 ASN 15 -7 ? ? ? A . n A 1 16 LEU 16 -6 ? ? ? A . n A 1 17 TYR 17 -5 ? ? ? A . n A 1 18 PHE 18 -4 ? ? ? A . n A 1 19 GLN 19 -3 ? ? ? A . n A 1 20 SER 20 -2 ? ? ? A . n A 1 21 HIS 21 -1 -1 HIS HIS A . n A 1 22 MET 22 1 1 MET MET A . n A 1 23 ASN 23 2 2 ASN ASN A . n A 1 24 VAL 24 3 3 VAL VAL A . n A 1 25 LEU 25 4 4 LEU LEU A . n A 1 26 VAL 26 5 5 VAL VAL A . n A 1 27 ILE 27 6 6 ILE ILE A . n A 1 28 GLY 28 7 7 GLY GLY A . n A 1 29 ARG 29 8 8 ARG ARG A . n A 1 30 GLY 30 9 9 GLY GLY A . n A 1 31 GLY 31 10 10 GLY GLY A . n A 1 32 ARG 32 11 11 ARG ARG A . n A 1 33 GLU 33 12 12 GLU GLU A . n A 1 34 HIS 34 13 13 HIS HIS A . n A 1 35 ALA 35 14 14 ALA ALA A . n A 1 36 ILE 36 15 15 ILE ILE A . n A 1 37 ALA 37 16 16 ALA ALA A . n A 1 38 TRP 38 17 17 TRP TRP A . n A 1 39 LYS 39 18 18 LYS LYS A . n A 1 40 ALA 40 19 19 ALA ALA A . n A 1 41 ALA 41 20 20 ALA ALA A . n A 1 42 GLN 42 21 21 GLN GLN A . n A 1 43 SER 43 22 22 SER SER A . n A 1 44 PRO 44 23 23 PRO PRO A . n A 1 45 LEU 45 24 24 LEU LEU A . n A 1 46 VAL 46 25 25 VAL VAL A . n A 1 47 GLY 47 26 26 GLY GLY A . n A 1 48 LYS 48 27 27 LYS LYS A . n A 1 49 LEU 49 28 28 LEU LEU A . n A 1 50 TYR 50 29 29 TYR TYR A . n A 1 51 VAL 51 30 30 VAL VAL A . n A 1 52 ALA 52 31 31 ALA ALA A . n A 1 53 PRO 53 32 32 PRO PRO A . n A 1 54 GLY 54 33 33 GLY GLY A . n A 1 55 ASN 55 34 34 ASN ASN A . n A 1 56 PRO 56 35 35 PRO PRO A . n A 1 57 GLY 57 36 36 GLY GLY A . n A 1 58 ILE 58 37 37 ILE ILE A . n A 1 59 ALA 59 38 38 ALA ALA A . n A 1 60 ASP 60 39 39 ASP ASP A . n A 1 61 VAL 61 40 40 VAL VAL A . n A 1 62 ALA 62 41 41 ALA ALA A . n A 1 63 GLU 63 42 42 GLU GLU A . n A 1 64 LEU 64 43 43 LEU LEU A . n A 1 65 VAL 65 44 44 VAL VAL A . n A 1 66 HIS 66 45 45 HIS HIS A . n A 1 67 ILE 67 46 46 ILE ILE A . n A 1 68 ASP 68 47 47 ASP ASP A . n A 1 69 GLU 69 48 48 GLU GLU A . n A 1 70 LEU 70 49 49 LEU LEU A . n A 1 71 ASP 71 50 50 ASP ASP A . n A 1 72 ILE 72 51 51 ILE ILE A . n A 1 73 GLU 73 52 52 GLU GLU A . n A 1 74 ALA 74 53 53 ALA ALA A . n A 1 75 LEU 75 54 54 LEU LEU A . n A 1 76 VAL 76 55 55 VAL VAL A . n A 1 77 GLN 77 56 56 GLN GLN A . n A 1 78 PHE 78 57 57 PHE PHE A . n A 1 79 ALA 79 58 58 ALA ALA A . n A 1 80 LYS 80 59 59 LYS LYS A . n A 1 81 GLN 81 60 60 GLN GLN A . n A 1 82 GLN 82 61 61 GLN GLN A . n A 1 83 ALA 83 62 62 ALA ALA A . n A 1 84 ILE 84 63 63 ILE ILE A . n A 1 85 ASP 85 64 64 ASP ASP A . n A 1 86 LEU 86 65 65 LEU LEU A . n A 1 87 THR 87 66 66 THR THR A . n A 1 88 ILE 88 67 67 ILE ILE A . n A 1 89 VAL 89 68 68 VAL VAL A . n A 1 90 GLY 90 69 69 GLY GLY A . n A 1 91 PRO 91 70 70 PRO PRO A . n A 1 92 GLU 92 71 71 GLU GLU A . n A 1 93 ALA 93 72 72 ALA ALA A . n A 1 94 PRO 94 73 73 PRO PRO A . n A 1 95 LEU 95 74 74 LEU LEU A . n A 1 96 ALA 96 75 75 ALA ALA A . n A 1 97 SER 97 76 76 SER SER A . n A 1 98 GLY 98 77 77 GLY GLY A . n A 1 99 ILE 99 78 78 ILE ILE A . n A 1 100 VAL 100 79 79 VAL VAL A . n A 1 101 ASP 101 80 80 ASP ASP A . n A 1 102 ARG 102 81 81 ARG ARG A . n A 1 103 PHE 103 82 82 PHE PHE A . n A 1 104 MET 104 83 83 MET MET A . n A 1 105 ALA 105 84 84 ALA ALA A . n A 1 106 GLU 106 85 85 GLU GLU A . n A 1 107 GLY 107 86 86 GLY GLY A . n A 1 108 LEU 108 87 87 LEU LEU A . n A 1 109 ARG 109 88 88 ARG ARG A . n A 1 110 ILE 110 89 89 ILE ILE A . n A 1 111 PHE 111 90 90 PHE PHE A . n A 1 112 GLY 112 91 91 GLY GLY A . n A 1 113 PRO 113 92 92 PRO PRO A . n A 1 114 SER 114 93 93 SER SER A . n A 1 115 GLN 115 94 94 GLN GLN A . n A 1 116 ARG 116 95 95 ARG ARG A . n A 1 117 ALA 117 96 96 ALA ALA A . n A 1 118 ALA 118 97 97 ALA ALA A . n A 1 119 LEU 119 98 98 LEU LEU A . n A 1 120 ILE 120 99 99 ILE ILE A . n A 1 121 GLU 121 100 100 GLU GLU A . n A 1 122 GLY 122 101 101 GLY GLY A . n A 1 123 SER 123 102 102 SER SER A . n A 1 124 LYS 124 103 103 LYS LYS A . n A 1 125 ALA 125 104 104 ALA ALA A . n A 1 126 PHE 126 105 105 PHE PHE A . n A 1 127 ALA 127 106 106 ALA ALA A . n A 1 128 LYS 128 107 107 LYS LYS A . n A 1 129 GLU 129 108 108 GLU GLU A . n A 1 130 LEU 130 109 109 LEU LEU A . n A 1 131 MET 131 110 110 MET MET A . n A 1 132 LYS 132 111 111 LYS LYS A . n A 1 133 LYS 133 112 112 LYS LYS A . n A 1 134 TYR 134 113 113 TYR TYR A . n A 1 135 GLY 135 114 114 GLY GLY A . n A 1 136 ILE 136 115 115 ILE ILE A . n A 1 137 PRO 137 116 116 PRO PRO A . n A 1 138 THR 138 117 117 THR THR A . n A 1 139 ALA 139 118 118 ALA ALA A . n A 1 140 ASP 140 119 119 ASP ASP A . n A 1 141 HIS 141 120 120 HIS HIS A . n A 1 142 ALA 142 121 121 ALA ALA A . n A 1 143 ALA 143 122 122 ALA ALA A . n A 1 144 PHE 144 123 123 PHE PHE A . n A 1 145 THR 145 124 124 THR THR A . n A 1 146 SER 146 125 125 SER SER A . n A 1 147 TYR 147 126 126 TYR TYR A . n A 1 148 GLU 148 127 127 GLU GLU A . n A 1 149 GLU 149 128 128 GLU GLU A . n A 1 150 ALA 150 129 129 ALA ALA A . n A 1 151 LYS 151 130 130 LYS LYS A . n A 1 152 ALA 152 131 131 ALA ALA A . n A 1 153 TYR 153 132 132 TYR TYR A . n A 1 154 ILE 154 133 133 ILE ILE A . n A 1 155 GLU 155 134 134 GLU GLU A . n A 1 156 GLN 156 135 135 GLN GLN A . n A 1 157 LYS 157 136 136 LYS LYS A . n A 1 158 GLY 158 137 137 GLY GLY A . n A 1 159 ALA 159 138 138 ALA ALA A . n A 1 160 PRO 160 139 139 PRO PRO A . n A 1 161 ILE 161 140 140 ILE ILE A . n A 1 162 VAL 162 141 141 VAL VAL A . n A 1 163 ILE 163 142 142 ILE ILE A . n A 1 164 LYS 164 143 143 LYS LYS A . n A 1 165 ALA 165 144 144 ALA ALA A . n A 1 166 ASP 166 145 145 ASP ASP A . n A 1 167 GLY 167 146 ? ? ? A . n A 1 168 LEU 168 147 ? ? ? A . n A 1 169 ALA 169 148 ? ? ? A . n A 1 170 ALA 170 149 ? ? ? A . n A 1 171 GLY 171 150 ? ? ? A . n A 1 172 LYS 172 151 ? ? ? A . n A 1 173 GLY 173 152 152 GLY GLY A . n A 1 174 VAL 174 153 153 VAL VAL A . n A 1 175 THR 175 154 154 THR THR A . n A 1 176 VAL 176 155 155 VAL VAL A . n A 1 177 ALA 177 156 156 ALA ALA A . n A 1 178 GLN 178 157 157 GLN GLN A . n A 1 179 THR 179 158 158 THR THR A . n A 1 180 VAL 180 159 159 VAL VAL A . n A 1 181 GLU 181 160 160 GLU GLU A . n A 1 182 GLU 182 161 161 GLU GLU A . n A 1 183 ALA 183 162 162 ALA ALA A . n A 1 184 LEU 184 163 163 LEU LEU A . n A 1 185 ALA 185 164 164 ALA ALA A . n A 1 186 ALA 186 165 165 ALA ALA A . n A 1 187 ALA 187 166 166 ALA ALA A . n A 1 188 LYS 188 167 167 LYS LYS A . n A 1 189 ALA 189 168 168 ALA ALA A . n A 1 190 ALA 190 169 169 ALA ALA A . n A 1 191 LEU 191 170 170 LEU LEU A . n A 1 192 VAL 192 171 171 VAL VAL A . n A 1 193 ASP 193 172 172 ASP ASP A . n A 1 194 GLY 194 173 173 GLY GLY A . n A 1 195 GLN 195 174 174 GLN GLN A . n A 1 196 PHE 196 175 175 PHE PHE A . n A 1 197 GLY 197 176 176 GLY GLY A . n A 1 198 THR 198 177 177 THR THR A . n A 1 199 ALA 199 178 178 ALA ALA A . n A 1 200 GLY 200 179 179 GLY GLY A . n A 1 201 SER 201 180 180 SER SER A . n A 1 202 GLN 202 181 181 GLN GLN A . n A 1 203 VAL 203 182 182 VAL VAL A . n A 1 204 VAL 204 183 183 VAL VAL A . n A 1 205 ILE 205 184 184 ILE ILE A . n A 1 206 GLU 206 185 185 GLU GLU A . n A 1 207 GLU 207 186 186 GLU GLU A . n A 1 208 TYR 208 187 187 TYR TYR A . n A 1 209 LEU 209 188 188 LEU LEU A . n A 1 210 GLU 210 189 189 GLU GLU A . n A 1 211 GLY 211 190 190 GLY GLY A . n A 1 212 GLU 212 191 191 GLU GLU A . n A 1 213 GLU 213 192 192 GLU GLU A . n A 1 214 PHE 214 193 193 PHE PHE A . n A 1 215 SER 215 194 194 SER SER A . n A 1 216 PHE 216 195 195 PHE PHE A . n A 1 217 MET 217 196 196 MET MET A . n A 1 218 ALA 218 197 197 ALA ALA A . n A 1 219 PHE 219 198 198 PHE PHE A . n A 1 220 VAL 220 199 199 VAL VAL A . n A 1 221 ASN 221 200 200 ASN ASN A . n A 1 222 GLY 222 201 201 GLY GLY A . n A 1 223 GLU 223 202 202 GLU GLU A . n A 1 224 LYS 224 203 203 LYS LYS A . n A 1 225 VAL 225 204 204 VAL VAL A . n A 1 226 TYR 226 205 205 TYR TYR A . n A 1 227 PRO 227 206 206 PRO PRO A . n A 1 228 LEU 228 207 207 LEU LEU A . n A 1 229 ALA 229 208 208 ALA ALA A . n A 1 230 ILE 230 209 209 ILE ILE A . n A 1 231 ALA 231 210 210 ALA ALA A . n A 1 232 GLN 232 211 211 GLN GLN A . n A 1 233 ASP 233 212 212 ASP ASP A . n A 1 234 HIS 234 213 213 HIS HIS A . n A 1 235 LYS 235 214 214 LYS LYS A . n A 1 236 ARG 236 215 215 ARG ARG A . n A 1 237 ALA 237 216 216 ALA ALA A . n A 1 238 TYR 238 217 217 TYR TYR A . n A 1 239 ASP 239 218 218 ASP ASP A . n A 1 240 GLY 240 219 219 GLY GLY A . n A 1 241 ASP 241 220 220 ASP ASP A . n A 1 242 GLU 242 221 221 GLU GLU A . n A 1 243 GLY 243 222 222 GLY GLY A . n A 1 244 PRO 244 223 223 PRO PRO A . n A 1 245 ASN 245 224 224 ASN ASN A . n A 1 246 THR 246 225 225 THR THR A . n A 1 247 GLY 247 226 226 GLY GLY A . n A 1 248 GLY 248 227 227 GLY GLY A . n A 1 249 MET 249 228 228 MET MET A . n A 1 250 GLY 250 229 229 GLY GLY A . n A 1 251 ALA 251 230 230 ALA ALA A . n A 1 252 TYR 252 231 231 TYR TYR A . n A 1 253 SER 253 232 232 SER SER A . n A 1 254 PRO 254 233 233 PRO PRO A . n A 1 255 VAL 255 234 234 VAL VAL A . n A 1 256 PRO 256 235 235 PRO PRO A . n A 1 257 GLN 257 236 236 GLN GLN A . n A 1 258 ILE 258 237 237 ILE ILE A . n A 1 259 SER 259 238 238 SER SER A . n A 1 260 ASP 260 239 239 ASP ASP A . n A 1 261 GLU 261 240 240 GLU GLU A . n A 1 262 MET 262 241 241 MET MET A . n A 1 263 MET 263 242 242 MET MET A . n A 1 264 ASP 264 243 243 ASP ASP A . n A 1 265 ALA 265 244 244 ALA ALA A . n A 1 266 ALA 266 245 245 ALA ALA A . n A 1 267 LEU 267 246 246 LEU LEU A . n A 1 268 GLU 268 247 247 GLU GLU A . n A 1 269 ALA 269 248 248 ALA ALA A . n A 1 270 ILE 270 249 249 ILE ILE A . n A 1 271 LEU 271 250 250 LEU LEU A . n A 1 272 ARG 272 251 251 ARG ARG A . n A 1 273 PRO 273 252 252 PRO PRO A . n A 1 274 ALA 274 253 253 ALA ALA A . n A 1 275 ALA 275 254 254 ALA ALA A . n A 1 276 LYS 276 255 255 LYS LYS A . n A 1 277 ALA 277 256 256 ALA ALA A . n A 1 278 LEU 278 257 257 LEU LEU A . n A 1 279 ALA 279 258 258 ALA ALA A . n A 1 280 ALA 280 259 259 ALA ALA A . n A 1 281 GLU 281 260 260 GLU GLU A . n A 1 282 GLY 282 261 261 GLY GLY A . n A 1 283 ARG 283 262 262 ARG ARG A . n A 1 284 PRO 284 263 263 PRO PRO A . n A 1 285 PHE 285 264 264 PHE PHE A . n A 1 286 LEU 286 265 265 LEU LEU A . n A 1 287 GLY 287 266 266 GLY GLY A . n A 1 288 VAL 288 267 267 VAL VAL A . n A 1 289 LEU 289 268 268 LEU LEU A . n A 1 290 TYR 290 269 269 TYR TYR A . n A 1 291 ALA 291 270 270 ALA ALA A . n A 1 292 GLY 292 271 271 GLY GLY A . n A 1 293 LEU 293 272 272 LEU LEU A . n A 1 294 MET 294 273 273 MET MET A . n A 1 295 ALA 295 274 274 ALA ALA A . n A 1 296 THR 296 275 275 THR THR A . n A 1 297 ALA 297 276 276 ALA ALA A . n A 1 298 ASN 298 277 277 ASN ASN A . n A 1 299 GLY 299 278 278 GLY GLY A . n A 1 300 PRO 300 279 279 PRO PRO A . n A 1 301 LYS 301 280 280 LYS LYS A . n A 1 302 VAL 302 281 281 VAL VAL A . n A 1 303 ILE 303 282 282 ILE ILE A . n A 1 304 GLU 304 283 283 GLU GLU A . n A 1 305 PHE 305 284 284 PHE PHE A . n A 1 306 ASN 306 285 285 ASN ASN A . n A 1 307 ALA 307 286 286 ALA ALA A . n A 1 308 ARG 308 287 287 ARG ARG A . n A 1 309 PHE 309 288 288 PHE PHE A . n A 1 310 GLY 310 289 289 GLY GLY A . n A 1 311 ASP 311 290 290 ASP ASP A . n A 1 312 PRO 312 291 291 PRO PRO A . n A 1 313 GLU 313 292 292 GLU GLU A . n A 1 314 ALA 314 293 293 ALA ALA A . n A 1 315 GLN 315 294 294 GLN GLN A . n A 1 316 VAL 316 295 295 VAL VAL A . n A 1 317 VAL 317 296 296 VAL VAL A . n A 1 318 LEU 318 297 297 LEU LEU A . n A 1 319 PRO 319 298 298 PRO PRO A . n A 1 320 ARG 320 299 299 ARG ARG A . n A 1 321 LEU 321 300 300 LEU LEU A . n A 1 322 LYS 322 301 301 LYS LYS A . n A 1 323 THR 323 302 302 THR THR A . n A 1 324 ASP 324 303 303 ASP ASP A . n A 1 325 LEU 325 304 304 LEU LEU A . n A 1 326 VAL 326 305 305 VAL VAL A . n A 1 327 GLU 327 306 306 GLU GLU A . n A 1 328 ALA 328 307 307 ALA ALA A . n A 1 329 VAL 329 308 308 VAL VAL A . n A 1 330 LEU 330 309 309 LEU LEU A . n A 1 331 ALA 331 310 310 ALA ALA A . n A 1 332 VAL 332 311 311 VAL VAL A . n A 1 333 MET 333 312 312 MET MET A . n A 1 334 ASP 334 313 313 ASP ASP A . n A 1 335 GLY 335 314 314 GLY GLY A . n A 1 336 LYS 336 315 315 LYS LYS A . n A 1 337 GLU 337 316 316 GLU GLU A . n A 1 338 LEU 338 317 317 LEU LEU A . n A 1 339 GLU 339 318 318 GLU GLU A . n A 1 340 LEU 340 319 319 LEU LEU A . n A 1 341 GLU 341 320 320 GLU GLU A . n A 1 342 TRP 342 321 321 TRP TRP A . n A 1 343 THR 343 322 322 THR THR A . n A 1 344 ASP 344 323 323 ASP ASP A . n A 1 345 GLU 345 324 324 GLU GLU A . n A 1 346 ALA 346 325 325 ALA ALA A . n A 1 347 VAL 347 326 326 VAL VAL A . n A 1 348 LEU 348 327 327 LEU LEU A . n A 1 349 GLY 349 328 328 GLY GLY A . n A 1 350 VAL 350 329 329 VAL VAL A . n A 1 351 VAL 351 330 330 VAL VAL A . n A 1 352 LEU 352 331 331 LEU LEU A . n A 1 353 ALA 353 332 332 ALA ALA A . n A 1 354 ALA 354 333 333 ALA ALA A . n A 1 355 LYS 355 334 334 LYS LYS A . n A 1 356 GLY 356 335 335 GLY GLY A . n A 1 357 TYR 357 336 336 TYR TYR A . n A 1 358 PRO 358 337 337 PRO PRO A . n A 1 359 GLY 359 338 338 GLY GLY A . n A 1 360 ALA 360 339 339 ALA ALA A . n A 1 361 TYR 361 340 340 TYR TYR A . n A 1 362 GLU 362 341 341 GLU GLU A . n A 1 363 ARG 363 342 342 ARG ARG A . n A 1 364 GLY 364 343 343 GLY GLY A . n A 1 365 ALA 365 344 344 ALA ALA A . n A 1 366 GLU 366 345 345 GLU GLU A . n A 1 367 ILE 367 346 346 ILE ILE A . n A 1 368 ARG 368 347 347 ARG ARG A . n A 1 369 GLY 369 348 348 GLY GLY A . n A 1 370 LEU 370 349 349 LEU LEU A . n A 1 371 ASP 371 350 350 ASP ASP A . n A 1 372 ARG 372 351 351 ARG ARG A . n A 1 373 ILE 373 352 352 ILE ILE A . n A 1 374 SER 374 353 353 SER SER A . n A 1 375 PRO 375 354 354 PRO PRO A . n A 1 376 ASP 376 355 355 ASP ASP A . n A 1 377 ALA 377 356 356 ALA ALA A . n A 1 378 LEU 378 357 357 LEU LEU A . n A 1 379 LEU 379 358 358 LEU LEU A . n A 1 380 PHE 380 359 359 PHE PHE A . n A 1 381 HIS 381 360 360 HIS HIS A . n A 1 382 ALA 382 361 361 ALA ALA A . n A 1 383 GLY 383 362 362 GLY GLY A . n A 1 384 THR 384 363 363 THR THR A . n A 1 385 LYS 385 364 364 LYS LYS A . n A 1 386 ARG 386 365 365 ARG ARG A . n A 1 387 GLU 387 366 366 GLU GLU A . n A 1 388 GLY 388 367 367 GLY GLY A . n A 1 389 GLY 389 368 368 GLY GLY A . n A 1 390 ALA 390 369 369 ALA ALA A . n A 1 391 TRP 391 370 370 TRP TRP A . n A 1 392 TYR 392 371 371 TYR TYR A . n A 1 393 THR 393 372 372 THR THR A . n A 1 394 ASN 394 373 373 ASN ASN A . n A 1 395 GLY 395 374 374 GLY GLY A . n A 1 396 GLY 396 375 375 GLY GLY A . n A 1 397 ARG 397 376 376 ARG ARG A . n A 1 398 VAL 398 377 377 VAL VAL A . n A 1 399 LEU 399 378 378 LEU LEU A . n A 1 400 LEU 400 379 379 LEU LEU A . n A 1 401 LEU 401 380 380 LEU LEU A . n A 1 402 ALA 402 381 381 ALA ALA A . n A 1 403 ALA 403 382 382 ALA ALA A . n A 1 404 LYS 404 383 383 LYS LYS A . n A 1 405 GLY 405 384 384 GLY GLY A . n A 1 406 GLU 406 385 385 GLU GLU A . n A 1 407 THR 407 386 386 THR THR A . n A 1 408 LEU 408 387 387 LEU LEU A . n A 1 409 ALA 409 388 388 ALA ALA A . n A 1 410 LYS 410 389 389 LYS LYS A . n A 1 411 ALA 411 390 390 ALA ALA A . n A 1 412 LYS 412 391 391 LYS LYS A . n A 1 413 GLU 413 392 392 GLU GLU A . n A 1 414 LYS 414 393 393 LYS LYS A . n A 1 415 ALA 415 394 394 ALA ALA A . n A 1 416 TYR 416 395 395 TYR TYR A . n A 1 417 GLU 417 396 396 GLU GLU A . n A 1 418 GLN 418 397 397 GLN GLN A . n A 1 419 LEU 419 398 398 LEU LEU A . n A 1 420 ALA 420 399 399 ALA ALA A . n A 1 421 ALA 421 400 400 ALA ALA A . n A 1 422 ILE 422 401 401 ILE ILE A . n A 1 423 ASP 423 402 402 ASP ASP A . n A 1 424 CYS 424 403 403 CYS CYS A . n A 1 425 ASP 425 404 404 ASP ASP A . n A 1 426 GLY 426 405 405 GLY GLY A . n A 1 427 LEU 427 406 406 LEU LEU A . n A 1 428 PHE 428 407 407 PHE PHE A . n A 1 429 TYR 429 408 408 TYR TYR A . n A 1 430 ARG 430 409 409 ARG ARG A . n A 1 431 ARG 431 410 410 ARG ARG A . n A 1 432 ASP 432 411 411 ASP ASP A . n A 1 433 ILE 433 412 412 ILE ILE A . n A 1 434 GLY 434 413 413 GLY GLY A . n A 1 435 ARG 435 414 414 ARG ARG A . n A 1 436 ARG 436 415 415 ARG ARG A . n A 1 437 ALA 437 416 416 ALA ALA A . n A 1 438 ILE 438 417 417 ILE ILE A . n A 1 439 GLU 439 418 418 GLU GLU A . n A 1 440 ARG 440 419 ? ? ? A . n A 1 441 ALA 441 420 ? ? ? A . n A 1 442 SER 442 421 ? ? ? A . n A 1 443 ALA 443 422 ? ? ? A . n A 1 444 ALA 444 423 ? ? ? A . n A 1 445 TYR 445 424 ? ? ? A . n A 1 446 THR 446 425 ? ? ? A . n A 1 447 ARG 447 426 ? ? ? A . n A 1 448 MET 448 427 ? ? ? A . n A 1 449 LYS 449 428 ? ? ? A . n A 1 450 GLY 450 429 ? ? ? A . n A 1 451 ARG 451 430 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 451 451 HOH HOH A . B 2 HOH 2 452 452 HOH HOH A . B 2 HOH 3 453 453 HOH HOH A . B 2 HOH 4 454 454 HOH HOH A . B 2 HOH 5 455 455 HOH HOH A . B 2 HOH 6 456 456 HOH HOH A . B 2 HOH 7 457 457 HOH HOH A . B 2 HOH 8 458 458 HOH HOH A . B 2 HOH 9 459 459 HOH HOH A . B 2 HOH 10 460 460 HOH HOH A . B 2 HOH 11 461 461 HOH HOH A . B 2 HOH 12 462 462 HOH HOH A . B 2 HOH 13 463 463 HOH HOH A . B 2 HOH 14 464 464 HOH HOH A . B 2 HOH 15 465 465 HOH HOH A . B 2 HOH 16 466 466 HOH HOH A . B 2 HOH 17 467 467 HOH HOH A . B 2 HOH 18 468 468 HOH HOH A . B 2 HOH 19 469 469 HOH HOH A . B 2 HOH 20 470 470 HOH HOH A . B 2 HOH 21 471 471 HOH HOH A . B 2 HOH 22 472 472 HOH HOH A . B 2 HOH 23 473 473 HOH HOH A . B 2 HOH 24 474 474 HOH HOH A . B 2 HOH 25 475 475 HOH HOH A . B 2 HOH 26 476 476 HOH HOH A . B 2 HOH 27 477 477 HOH HOH A . B 2 HOH 28 478 478 HOH HOH A . B 2 HOH 29 479 479 HOH HOH A . B 2 HOH 30 480 480 HOH HOH A . B 2 HOH 31 481 481 HOH HOH A . B 2 HOH 32 482 482 HOH HOH A . B 2 HOH 33 483 483 HOH HOH A . B 2 HOH 34 484 484 HOH HOH A . B 2 HOH 35 485 485 HOH HOH A . B 2 HOH 36 486 486 HOH HOH A . B 2 HOH 37 487 487 HOH HOH A . B 2 HOH 38 488 488 HOH HOH A . B 2 HOH 39 489 489 HOH HOH A . B 2 HOH 40 490 490 HOH HOH A . B 2 HOH 41 491 491 HOH HOH A . B 2 HOH 42 492 492 HOH HOH A . B 2 HOH 43 493 493 HOH HOH A . B 2 HOH 44 494 494 HOH HOH A . B 2 HOH 45 495 495 HOH HOH A . B 2 HOH 46 496 496 HOH HOH A . B 2 HOH 47 497 497 HOH HOH A . B 2 HOH 48 498 498 HOH HOH A . B 2 HOH 49 499 499 HOH HOH A . B 2 HOH 50 500 500 HOH HOH A . B 2 HOH 51 501 501 HOH HOH A . B 2 HOH 52 502 502 HOH HOH A . B 2 HOH 53 503 503 HOH HOH A . B 2 HOH 54 504 504 HOH HOH A . B 2 HOH 55 505 505 HOH HOH A . B 2 HOH 56 506 506 HOH HOH A . B 2 HOH 57 507 507 HOH HOH A . B 2 HOH 58 508 508 HOH HOH A . B 2 HOH 59 509 509 HOH HOH A . B 2 HOH 60 510 510 HOH HOH A . B 2 HOH 61 511 511 HOH HOH A . B 2 HOH 62 512 512 HOH HOH A . B 2 HOH 63 513 513 HOH HOH A . B 2 HOH 64 514 514 HOH HOH A . B 2 HOH 65 515 515 HOH HOH A . B 2 HOH 66 516 516 HOH HOH A . B 2 HOH 67 517 517 HOH HOH A . B 2 HOH 68 518 518 HOH HOH A . B 2 HOH 69 519 519 HOH HOH A . B 2 HOH 70 520 520 HOH HOH A . B 2 HOH 71 521 521 HOH HOH A . B 2 HOH 72 522 522 HOH HOH A . B 2 HOH 73 523 523 HOH HOH A . B 2 HOH 74 524 524 HOH HOH A . B 2 HOH 75 525 525 HOH HOH A . B 2 HOH 76 526 526 HOH HOH A . B 2 HOH 77 527 527 HOH HOH A . B 2 HOH 78 528 528 HOH HOH A . B 2 HOH 79 529 529 HOH HOH A . B 2 HOH 80 530 530 HOH HOH A . B 2 HOH 81 531 531 HOH HOH A . B 2 HOH 82 532 532 HOH HOH A . B 2 HOH 83 533 533 HOH HOH A . B 2 HOH 84 534 534 HOH HOH A . B 2 HOH 85 535 535 HOH HOH A . B 2 HOH 86 536 536 HOH HOH A . B 2 HOH 87 537 537 HOH HOH A . B 2 HOH 88 538 538 HOH HOH A . B 2 HOH 89 539 539 HOH HOH A . B 2 HOH 90 540 540 HOH HOH A . B 2 HOH 91 541 541 HOH HOH A . B 2 HOH 92 542 542 HOH HOH A . B 2 HOH 93 543 543 HOH HOH A . B 2 HOH 94 544 544 HOH HOH A . B 2 HOH 95 545 545 HOH HOH A . B 2 HOH 96 546 546 HOH HOH A . B 2 HOH 97 547 547 HOH HOH A . B 2 HOH 98 548 548 HOH HOH A . B 2 HOH 99 549 549 HOH HOH A . B 2 HOH 100 550 550 HOH HOH A . B 2 HOH 101 551 551 HOH HOH A . B 2 HOH 102 552 552 HOH HOH A . B 2 HOH 103 553 553 HOH HOH A . B 2 HOH 104 554 554 HOH HOH A . B 2 HOH 105 555 555 HOH HOH A . B 2 HOH 106 556 556 HOH HOH A . B 2 HOH 107 557 557 HOH HOH A . B 2 HOH 108 558 558 HOH HOH A . B 2 HOH 109 559 559 HOH HOH A . B 2 HOH 110 560 560 HOH HOH A . B 2 HOH 111 561 561 HOH HOH A . B 2 HOH 112 562 562 HOH HOH A . B 2 HOH 113 563 563 HOH HOH A . B 2 HOH 114 564 564 HOH HOH A . B 2 HOH 115 565 565 HOH HOH A . B 2 HOH 116 566 566 HOH HOH A . B 2 HOH 117 567 567 HOH HOH A . B 2 HOH 118 568 568 HOH HOH A . B 2 HOH 119 569 569 HOH HOH A . B 2 HOH 120 570 570 HOH HOH A . B 2 HOH 121 571 571 HOH HOH A . B 2 HOH 122 572 572 HOH HOH A . B 2 HOH 123 573 573 HOH HOH A . B 2 HOH 124 574 574 HOH HOH A . B 2 HOH 125 575 575 HOH HOH A . B 2 HOH 126 576 576 HOH HOH A . B 2 HOH 127 577 577 HOH HOH A . B 2 HOH 128 578 578 HOH HOH A . B 2 HOH 129 579 579 HOH HOH A . B 2 HOH 130 580 580 HOH HOH A . B 2 HOH 131 581 581 HOH HOH A . B 2 HOH 132 582 582 HOH HOH A . B 2 HOH 133 583 583 HOH HOH A . B 2 HOH 134 584 584 HOH HOH A . B 2 HOH 135 585 585 HOH HOH A . B 2 HOH 136 586 586 HOH HOH A . B 2 HOH 137 587 587 HOH HOH A . B 2 HOH 138 588 588 HOH HOH A . B 2 HOH 139 589 589 HOH HOH A . B 2 HOH 140 590 590 HOH HOH A . B 2 HOH 141 591 591 HOH HOH A . B 2 HOH 142 592 592 HOH HOH A . B 2 HOH 143 593 593 HOH HOH A . B 2 HOH 144 594 594 HOH HOH A . B 2 HOH 145 595 595 HOH HOH A . B 2 HOH 146 596 596 HOH HOH A . B 2 HOH 147 597 597 HOH HOH A . B 2 HOH 148 598 598 HOH HOH A . B 2 HOH 149 599 599 HOH HOH A . B 2 HOH 150 600 600 HOH HOH A . B 2 HOH 151 601 601 HOH HOH A . B 2 HOH 152 602 602 HOH HOH A . B 2 HOH 153 603 603 HOH HOH A . B 2 HOH 154 604 604 HOH HOH A . B 2 HOH 155 605 605 HOH HOH A . B 2 HOH 156 606 606 HOH HOH A . B 2 HOH 157 607 607 HOH HOH A . B 2 HOH 158 608 608 HOH HOH A . B 2 HOH 159 609 609 HOH HOH A . B 2 HOH 160 610 610 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 MOLREP phasing . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 134 ? ? -68.51 9.18 2 1 ILE A 249 ? ? -120.21 -64.04 3 1 ASN A 373 ? ? -158.61 51.77 4 1 CYS A 403 ? ? -169.85 110.87 5 1 TYR A 408 ? ? -171.81 146.33 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 410 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.113 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -21 ? A MET 1 2 1 Y 1 A GLY -20 ? A GLY 2 3 1 Y 1 A SER -19 ? A SER 3 4 1 Y 1 A SER -18 ? A SER 4 5 1 Y 1 A HIS -17 ? A HIS 5 6 1 Y 1 A HIS -16 ? A HIS 6 7 1 Y 1 A HIS -15 ? A HIS 7 8 1 Y 1 A HIS -14 ? A HIS 8 9 1 Y 1 A HIS -13 ? A HIS 9 10 1 Y 1 A HIS -12 ? A HIS 10 11 1 Y 1 A SER -11 ? A SER 11 12 1 Y 1 A SER -10 ? A SER 12 13 1 Y 1 A GLY -9 ? A GLY 13 14 1 Y 1 A GLU -8 ? A GLU 14 15 1 Y 1 A ASN -7 ? A ASN 15 16 1 Y 1 A LEU -6 ? A LEU 16 17 1 Y 1 A TYR -5 ? A TYR 17 18 1 Y 1 A PHE -4 ? A PHE 18 19 1 Y 1 A GLN -3 ? A GLN 19 20 1 Y 1 A SER -2 ? A SER 20 21 1 Y 1 A GLY 146 ? A GLY 167 22 1 Y 1 A LEU 147 ? A LEU 168 23 1 Y 1 A ALA 148 ? A ALA 169 24 1 Y 1 A ALA 149 ? A ALA 170 25 1 Y 1 A GLY 150 ? A GLY 171 26 1 Y 1 A LYS 151 ? A LYS 172 27 1 Y 1 A ARG 419 ? A ARG 440 28 1 Y 1 A ALA 420 ? A ALA 441 29 1 Y 1 A SER 421 ? A SER 442 30 1 Y 1 A ALA 422 ? A ALA 443 31 1 Y 1 A ALA 423 ? A ALA 444 32 1 Y 1 A TYR 424 ? A TYR 445 33 1 Y 1 A THR 425 ? A THR 446 34 1 Y 1 A ARG 426 ? A ARG 447 35 1 Y 1 A MET 427 ? A MET 448 36 1 Y 1 A LYS 428 ? A LYS 449 37 1 Y 1 A GLY 429 ? A GLY 450 38 1 Y 1 A ARG 430 ? A ARG 451 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2YRW _pdbx_initial_refinement_model.details 'PDB ENTRY 2YRW' #