HEADER SIGNALING PROTEIN 05-APR-07 2YU0 TITLE SOLUTION STRUCTURES OF THE PAAD_DAPIN DOMAIN OF MUS MUSCULUS TITLE 2 INTERFERON-ACTIVATABLE PROTEIN 205 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERFERON-ACTIVABLE PROTEIN 205; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PAAD_DAPIN, UNP RESIDUES 8-88; COMPND 5 SYNONYM: IFI-205, D3 PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: IFI205; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P051212-10; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS PAAD_DAPIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 2 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.SATO,N.TOCHIO,S.KOSHIBA,M.WATANABE,T.HARADA,T.KIGAWA,S.YOKOYAMA, AUTHOR 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 16-MAR-22 2YU0 1 REMARK SEQADV REVDAT 2 24-FEB-09 2YU0 1 VERSN REVDAT 1 19-FEB-08 2YU0 0 JRNL AUTH M.SATO,N.TOCHIO,S.KOSHIBA,M.WATANABE,T.HARADA,T.KIGAWA, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURES OF THE PAAD_DAPIN DOMAIN OF MUS MUSCULUS JRNL TITL 2 INTERFERON-ACTIVATABLE PROTEIN 205 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YU0 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000027132. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5MM SAMPLE U-15N,13C; 20MM D REMARK 210 -TRIS-HCL; 100MM NACL; 1MM D-DTT; REMARK 210 0.02% NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 5 42.48 70.14 REMARK 500 1 SER A 6 40.76 -109.27 REMARK 500 1 LYS A 19 -38.01 -36.32 REMARK 500 1 LEU A 35 177.24 -55.52 REMARK 500 1 THR A 45 -28.10 -39.93 REMARK 500 1 GLU A 88 -58.85 -129.80 REMARK 500 2 SER A 2 105.57 -50.12 REMARK 500 2 SER A 3 41.85 35.10 REMARK 500 2 PRO A 57 0.59 -69.80 REMARK 500 2 LEU A 62 -70.99 -58.58 REMARK 500 3 SER A 6 51.83 -93.49 REMARK 500 3 ASN A 34 38.26 72.22 REMARK 500 3 ARG A 37 -25.75 -39.48 REMARK 500 3 ASN A 39 46.96 -107.95 REMARK 500 3 PRO A 57 0.26 -69.77 REMARK 500 3 LEU A 62 -37.87 -39.01 REMARK 500 3 SER A 89 40.30 34.46 REMARK 500 3 PRO A 91 98.42 -69.78 REMARK 500 3 SER A 93 45.02 -97.91 REMARK 500 4 ARG A 12 -34.86 -35.00 REMARK 500 4 LEU A 35 176.85 -57.92 REMARK 500 4 ASN A 39 44.72 -80.77 REMARK 500 4 ILE A 46 -70.12 -62.95 REMARK 500 4 GLU A 71 -38.45 -37.67 REMARK 500 5 SER A 5 -50.57 -124.30 REMARK 500 5 ILE A 8 142.12 -35.30 REMARK 500 5 LEU A 35 -178.78 -58.29 REMARK 500 5 ARG A 37 -32.34 -36.32 REMARK 500 5 PRO A 57 0.68 -69.73 REMARK 500 5 SER A 92 101.16 -55.00 REMARK 500 6 SER A 6 42.07 -84.20 REMARK 500 6 LEU A 14 -63.42 -91.82 REMARK 500 6 GLU A 15 -19.66 -49.96 REMARK 500 6 LEU A 35 -175.84 -56.70 REMARK 500 6 GLU A 71 -27.15 -39.10 REMARK 500 6 PRO A 91 84.74 -69.78 REMARK 500 7 LEU A 10 -30.48 -37.03 REMARK 500 7 LYS A 19 -37.67 -34.96 REMARK 500 7 ASN A 39 48.81 -106.61 REMARK 500 7 LYS A 64 -34.05 -39.38 REMARK 500 7 SER A 89 52.15 39.79 REMARK 500 8 SER A 6 62.09 -105.67 REMARK 500 8 ARG A 37 -26.94 -38.38 REMARK 500 8 ASN A 39 46.31 -102.98 REMARK 500 8 PRO A 57 2.19 -69.87 REMARK 500 8 SER A 60 27.16 46.14 REMARK 500 9 TYR A 43 159.12 -38.80 REMARK 500 9 GLU A 53 -35.57 -38.40 REMARK 500 9 SER A 60 29.13 47.63 REMARK 500 9 SER A 89 38.79 34.64 REMARK 500 REMARK 500 THIS ENTRY HAS 123 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT008008361.1 RELATED DB: TARGETDB DBREF 2YU0 A 8 88 UNP Q08619 IFI5_MOUSE 8 88 SEQADV 2YU0 GLY A 1 UNP Q08619 EXPRESSION TAG SEQADV 2YU0 SER A 2 UNP Q08619 EXPRESSION TAG SEQADV 2YU0 SER A 3 UNP Q08619 EXPRESSION TAG SEQADV 2YU0 GLY A 4 UNP Q08619 EXPRESSION TAG SEQADV 2YU0 SER A 5 UNP Q08619 EXPRESSION TAG SEQADV 2YU0 SER A 6 UNP Q08619 EXPRESSION TAG SEQADV 2YU0 GLY A 7 UNP Q08619 EXPRESSION TAG SEQADV 2YU0 SER A 89 UNP Q08619 EXPRESSION TAG SEQADV 2YU0 GLY A 90 UNP Q08619 EXPRESSION TAG SEQADV 2YU0 PRO A 91 UNP Q08619 EXPRESSION TAG SEQADV 2YU0 SER A 92 UNP Q08619 EXPRESSION TAG SEQADV 2YU0 SER A 93 UNP Q08619 EXPRESSION TAG SEQADV 2YU0 GLY A 94 UNP Q08619 EXPRESSION TAG SEQRES 1 A 94 GLY SER SER GLY SER SER GLY ILE VAL LEU LEU ARG GLY SEQRES 2 A 94 LEU GLU CYS ILE ASN LYS HIS TYR PHE SER LEU PHE LYS SEQRES 3 A 94 SER LEU LEU ALA ARG ASP LEU ASN LEU GLU ARG ASP ASN SEQRES 4 A 94 GLN GLU GLN TYR THR THR ILE GLN ILE ALA ASN MET MET SEQRES 5 A 94 GLU GLU LYS PHE PRO ALA ASP SER GLY LEU GLY LYS LEU SEQRES 6 A 94 ILE GLU PHE CYS GLU GLU VAL PRO ALA LEU ARG LYS ARG SEQRES 7 A 94 ALA GLU ILE LEU LYS LYS GLU ARG SER GLU SER GLY PRO SEQRES 8 A 94 SER SER GLY HELIX 1 1 ASN A 18 ARG A 31 1 14 HELIX 2 2 THR A 44 PHE A 56 1 13 HELIX 3 3 GLY A 61 VAL A 72 1 12 HELIX 4 4 LEU A 75 SER A 87 1 13 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1