data_2YU3 # _entry.id 2YU3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YU3 pdb_00002yu3 10.2210/pdb2yu3/pdb RCSB RCSB027135 ? ? WWPDB D_1000027135 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hss001003795.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YU3 _pdbx_database_status.recvd_initial_deposition_date 2007-04-05 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'He, F.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Shirouzu, M.' 5 'Terada, T.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the domain swapped WingedHelix in DNA-directed RNA polymerase III 39 kDa polypeptide' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'He, F.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Shirouzu, M.' 5 ? primary 'Terada, T.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'DNA-directed RNA polymerase III 39 kDa polypeptide F variant' _entity.formula_weight 10296.697 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Winged Helix domain, UNP residues 61-142' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGGQLDLLRSNTGLLYRIKDSQNAGKMKGSDNQEKLVYQIIEDAGNKGIWSRDVRYKSNLPLTEINKILKNLESK KLIKAVKSVSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGGQLDLLRSNTGLLYRIKDSQNAGKMKGSDNQEKLVYQIIEDAGNKGIWSRDVRYKSNLPLTEINKILKNLESK KLIKAVKSVSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hss001003795.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 GLY n 1 9 GLN n 1 10 LEU n 1 11 ASP n 1 12 LEU n 1 13 LEU n 1 14 ARG n 1 15 SER n 1 16 ASN n 1 17 THR n 1 18 GLY n 1 19 LEU n 1 20 LEU n 1 21 TYR n 1 22 ARG n 1 23 ILE n 1 24 LYS n 1 25 ASP n 1 26 SER n 1 27 GLN n 1 28 ASN n 1 29 ALA n 1 30 GLY n 1 31 LYS n 1 32 MET n 1 33 LYS n 1 34 GLY n 1 35 SER n 1 36 ASP n 1 37 ASN n 1 38 GLN n 1 39 GLU n 1 40 LYS n 1 41 LEU n 1 42 VAL n 1 43 TYR n 1 44 GLN n 1 45 ILE n 1 46 ILE n 1 47 GLU n 1 48 ASP n 1 49 ALA n 1 50 GLY n 1 51 ASN n 1 52 LYS n 1 53 GLY n 1 54 ILE n 1 55 TRP n 1 56 SER n 1 57 ARG n 1 58 ASP n 1 59 VAL n 1 60 ARG n 1 61 TYR n 1 62 LYS n 1 63 SER n 1 64 ASN n 1 65 LEU n 1 66 PRO n 1 67 LEU n 1 68 THR n 1 69 GLU n 1 70 ILE n 1 71 ASN n 1 72 LYS n 1 73 ILE n 1 74 LEU n 1 75 LYS n 1 76 ASN n 1 77 LEU n 1 78 GLU n 1 79 SER n 1 80 LYS n 1 81 LYS n 1 82 LEU n 1 83 ILE n 1 84 LYS n 1 85 ALA n 1 86 VAL n 1 87 LYS n 1 88 SER n 1 89 VAL n 1 90 SER n 1 91 GLY n 1 92 PRO n 1 93 SER n 1 94 SER n 1 95 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'POLR3F, RPC39' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q53FI8_HUMAN _struct_ref.pdbx_db_accession Q53FI8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GQLDLLRSNTGLLYRIKDSQNAGKMKGSDNQEKLVYQIIEDAGNKGIWSRDVRYKSNLPLTEINKILKNLESKKLIKAVK SV ; _struct_ref.pdbx_align_begin 61 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YU3 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 89 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q53FI8 _struct_ref_seq.db_align_beg 61 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 142 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 89 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YU3 GLY A 1 ? UNP Q53FI8 ? ? 'expression tag' 1 1 1 2YU3 SER A 2 ? UNP Q53FI8 ? ? 'expression tag' 2 2 1 2YU3 SER A 3 ? UNP Q53FI8 ? ? 'expression tag' 3 3 1 2YU3 GLY A 4 ? UNP Q53FI8 ? ? 'expression tag' 4 4 1 2YU3 SER A 5 ? UNP Q53FI8 ? ? 'expression tag' 5 5 1 2YU3 SER A 6 ? UNP Q53FI8 ? ? 'expression tag' 6 6 1 2YU3 GLY A 7 ? UNP Q53FI8 ? ? 'expression tag' 7 7 1 2YU3 SER A 90 ? UNP Q53FI8 ? ? 'expression tag' 90 8 1 2YU3 GLY A 91 ? UNP Q53FI8 ? ? 'expression tag' 91 9 1 2YU3 PRO A 92 ? UNP Q53FI8 ? ? 'expression tag' 92 10 1 2YU3 SER A 93 ? UNP Q53FI8 ? ? 'expression tag' 93 11 1 2YU3 SER A 94 ? UNP Q53FI8 ? ? 'expression tag' 94 12 1 2YU3 GLY A 95 ? UNP Q53FI8 ? ? 'expression tag' 95 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.8mM U-15,13C; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2YU3 _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2YU3 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2YU3 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9820 'Kobayashi, N.' 4 'structure solution' CYANA 2.1 'Guntert, P.' 5 refinement CYANA 2.1 'Guntert, P.' 6 # _exptl.entry_id 2YU3 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2YU3 _struct.title 'Solution structure of the domain swapped WingedHelix in DNA-directed RNA polymerase III 39 kDa polypeptide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YU3 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;Winged Helix domain, RNA POLYMERASE III C39 SUBUNIT, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSCRIPTION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 37 ? ALA A 49 ? ASN A 37 ALA A 49 1 ? 13 HELX_P HELX_P2 2 SER A 56 ? SER A 63 ? SER A 56 SER A 63 1 ? 8 HELX_P HELX_P3 3 LEU A 67 ? LYS A 80 ? LEU A 67 LYS A 80 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 54 ? TRP A 55 ? ILE A 54 TRP A 55 A 2 LEU A 20 ? ILE A 23 ? LEU A 20 ILE A 23 A 3 ILE A 83 ? VAL A 86 ? ILE A 83 VAL A 86 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 54 ? O ILE A 54 N TYR A 21 ? N TYR A 21 A 2 3 N ARG A 22 ? N ARG A 22 O LYS A 84 ? O LYS A 84 # _database_PDB_matrix.entry_id 2YU3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YU3 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 GLN 9 9 9 GLN GLN A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 ASN 16 16 16 ASN ASN A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 TYR 21 21 21 TYR TYR A . n A 1 22 ARG 22 22 22 ARG ARG A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 GLN 27 27 27 GLN GLN A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 MET 32 32 32 MET MET A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 GLN 38 38 38 GLN GLN A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 TRP 55 55 55 TRP TRP A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 ASN 71 71 71 ASN ASN A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 GLY 95 95 95 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' 5 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_remark.id 650 _pdbx_database_remark.text ;HELIX DETERMINATION METHOD: AUTHOR DETERMINED ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 5 ? ? 52.55 84.51 2 1 ASP A 25 ? ? 60.30 176.63 3 1 GLN A 27 ? ? -139.40 -59.96 4 1 ALA A 29 ? ? -172.46 103.52 5 1 MET A 32 ? ? 52.64 -170.39 6 1 LYS A 33 ? ? -161.89 -66.66 7 1 ASP A 36 ? ? -93.18 -61.00 8 1 SER A 90 ? ? -161.84 95.73 9 1 SER A 94 ? ? -56.85 101.79 10 2 THR A 17 ? ? -135.06 -49.33 11 2 ASP A 25 ? ? 63.29 164.74 12 2 GLN A 27 ? ? -102.04 55.67 13 2 ASN A 28 ? ? -172.35 97.97 14 2 ALA A 29 ? ? -175.44 92.28 15 2 LYS A 33 ? ? 58.30 -177.08 16 2 SER A 90 ? ? -166.40 -61.12 17 3 SER A 2 ? ? 58.79 82.24 18 3 SER A 5 ? ? 56.64 -176.74 19 3 SER A 6 ? ? -123.03 -57.66 20 3 THR A 17 ? ? -105.12 -60.82 21 3 ASP A 25 ? ? 62.79 96.29 22 3 MET A 32 ? ? 58.89 96.61 23 3 SER A 35 ? ? -64.91 92.52 24 3 VAL A 89 ? ? 60.40 92.32 25 3 SER A 93 ? ? -137.76 -43.96 26 3 SER A 94 ? ? 58.25 178.72 27 4 SER A 6 ? ? -143.68 -73.03 28 4 ARG A 14 ? ? -105.92 67.14 29 4 ASP A 25 ? ? 57.59 -178.11 30 4 SER A 26 ? ? -153.19 54.19 31 4 GLN A 27 ? ? -150.99 -52.62 32 4 SER A 90 ? ? -165.10 109.82 33 5 SER A 2 ? ? 62.02 167.64 34 5 ASP A 25 ? ? 58.18 178.44 35 5 SER A 26 ? ? -148.97 26.61 36 5 ASN A 28 ? ? -168.50 99.74 37 5 ALA A 29 ? ? -164.74 30.64 38 5 VAL A 89 ? ? -139.28 -61.34 39 5 SER A 90 ? ? 54.72 70.73 40 6 SER A 2 ? ? -149.75 54.18 41 6 ASP A 25 ? ? 58.68 179.30 42 6 SER A 26 ? ? -127.12 -53.85 43 6 ALA A 29 ? ? 63.03 -169.80 44 6 LYS A 31 ? ? -140.76 27.19 45 6 MET A 32 ? ? -56.38 177.42 46 6 SER A 93 ? ? 60.51 -179.60 47 7 SER A 5 ? ? -170.77 91.84 48 7 SER A 6 ? ? -175.67 132.53 49 7 ASP A 11 ? ? 57.46 -177.73 50 7 LEU A 12 ? ? 58.19 95.43 51 7 ASP A 25 ? ? 61.32 100.67 52 7 GLN A 27 ? ? -176.54 -71.62 53 7 ALA A 29 ? ? -171.92 30.91 54 7 MET A 32 ? ? 59.90 97.88 55 8 GLN A 9 ? ? -166.22 42.64 56 8 ARG A 14 ? ? -53.16 171.37 57 8 THR A 17 ? ? 56.64 -175.45 58 8 ASP A 25 ? ? 61.58 172.08 59 8 GLN A 27 ? ? -153.22 32.94 60 8 ALA A 29 ? ? -153.16 57.89 61 8 SER A 90 ? ? -167.43 50.28 62 9 SER A 2 ? ? -161.37 74.02 63 9 SER A 3 ? ? -140.54 49.13 64 9 SER A 6 ? ? -100.68 79.15 65 9 GLN A 9 ? ? 61.45 88.10 66 9 ASP A 11 ? ? 62.95 170.10 67 9 THR A 17 ? ? 55.90 -176.07 68 9 ASP A 25 ? ? 58.10 -176.24 69 9 GLN A 27 ? ? -152.17 26.42 70 9 ALA A 29 ? ? 62.86 73.53 71 9 MET A 32 ? ? 59.87 98.22 72 9 SER A 90 ? ? -148.93 -45.27 73 9 SER A 93 ? ? 61.05 95.79 74 10 SER A 3 ? ? -102.06 73.44 75 10 GLN A 9 ? ? 60.32 178.26 76 10 LEU A 10 ? ? 60.23 172.58 77 10 THR A 17 ? ? -105.28 -62.48 78 10 ASP A 25 ? ? 53.79 -172.34 79 10 SER A 26 ? ? -155.50 37.43 80 10 GLN A 27 ? ? -164.01 27.98 81 10 LYS A 31 ? ? -157.64 27.49 82 10 MET A 32 ? ? 56.26 -176.06 83 10 SER A 35 ? ? -66.15 90.56 84 10 VAL A 89 ? ? 61.55 101.97 85 10 SER A 90 ? ? -154.78 55.54 86 10 SER A 93 ? ? 56.54 75.57 87 10 SER A 94 ? ? 58.16 -175.61 88 11 ASP A 25 ? ? 61.46 99.76 89 11 GLN A 27 ? ? -177.40 -73.98 90 11 ALA A 29 ? ? -169.36 43.97 91 11 MET A 32 ? ? -51.99 -74.00 92 11 LYS A 33 ? ? -179.17 55.11 93 11 VAL A 89 ? ? 51.74 87.27 94 11 SER A 90 ? ? 58.86 -172.80 95 11 SER A 93 ? ? -95.49 36.48 96 12 SER A 3 ? ? 58.67 -175.88 97 12 ASP A 11 ? ? 52.24 72.57 98 12 GLN A 27 ? ? 63.23 104.02 99 12 ASN A 28 ? ? -147.74 59.82 100 12 PRO A 92 ? ? -69.73 90.60 101 13 SER A 5 ? ? -103.08 60.13 102 13 SER A 6 ? ? -155.81 26.73 103 13 LEU A 12 ? ? 62.98 89.48 104 13 ASP A 25 ? ? 63.10 165.72 105 13 ASN A 28 ? ? -164.33 97.73 106 13 MET A 32 ? ? 58.90 82.69 107 13 LYS A 33 ? ? -69.08 -176.47 108 13 SER A 35 ? ? -53.93 102.28 109 13 SER A 90 ? ? -162.96 -44.35 110 13 SER A 93 ? ? -144.12 39.34 111 13 SER A 94 ? ? -159.36 69.09 112 14 SER A 5 ? ? -162.77 115.27 113 14 ARG A 14 ? ? 56.57 75.84 114 14 ASP A 25 ? ? 56.86 -178.41 115 14 SER A 26 ? ? -132.91 -41.92 116 14 ALA A 29 ? ? -158.93 35.42 117 14 LYS A 33 ? ? -173.68 -62.18 118 14 ASN A 37 ? ? -59.90 -72.00 119 15 SER A 2 ? ? -178.93 112.06 120 15 GLN A 9 ? ? -161.80 39.03 121 15 THR A 17 ? ? -148.93 -48.90 122 15 ASP A 25 ? ? 57.59 -171.81 123 15 SER A 26 ? ? -156.16 61.06 124 15 GLN A 27 ? ? -165.67 -48.94 125 15 SER A 35 ? ? -54.26 101.92 126 15 VAL A 89 ? ? 51.94 85.54 127 16 SER A 6 ? ? -172.97 -172.29 128 16 SER A 15 ? ? 52.31 85.58 129 16 ASP A 25 ? ? 62.75 103.63 130 16 ASN A 28 ? ? 57.99 82.72 131 16 ALA A 29 ? ? -158.42 83.72 132 16 LYS A 33 ? ? -179.23 145.14 133 16 GLU A 69 ? ? -92.60 -60.05 134 16 VAL A 89 ? ? 59.29 90.86 135 16 SER A 94 ? ? -130.75 -71.22 136 17 SER A 5 ? ? 54.63 -172.48 137 17 LEU A 10 ? ? -57.76 106.02 138 17 THR A 17 ? ? 59.74 -174.19 139 17 ASP A 25 ? ? 52.44 -170.22 140 17 SER A 26 ? ? -151.96 26.49 141 17 GLN A 27 ? ? -149.57 47.07 142 17 ALA A 29 ? ? -173.16 -169.78 143 17 LYS A 33 ? ? -68.48 -170.04 144 17 GLU A 69 ? ? -92.57 -60.03 145 17 PRO A 92 ? ? -69.68 84.78 146 17 SER A 93 ? ? -171.85 -66.55 147 18 SER A 2 ? ? 57.67 -179.79 148 18 SER A 5 ? ? 59.09 86.26 149 18 ASP A 25 ? ? 63.42 105.11 150 18 LYS A 33 ? ? -174.08 139.75 151 18 VAL A 89 ? ? 58.73 88.51 152 18 PRO A 92 ? ? -69.78 85.61 153 18 SER A 94 ? ? -105.14 -60.24 154 19 SER A 3 ? ? 54.75 -173.19 155 19 SER A 5 ? ? -162.48 59.91 156 19 SER A 6 ? ? -150.25 -42.86 157 19 GLN A 9 ? ? 59.05 95.87 158 19 THR A 17 ? ? -133.09 -42.82 159 19 ASP A 25 ? ? 54.66 -174.12 160 19 ASN A 28 ? ? -150.43 84.96 161 19 LYS A 33 ? ? 63.06 163.41 162 19 SER A 94 ? ? -146.20 -64.35 163 20 SER A 2 ? ? 59.53 -171.66 164 20 ARG A 14 ? ? -167.63 -60.46 165 20 ASP A 25 ? ? 58.28 -175.41 166 20 SER A 26 ? ? -150.73 45.05 167 20 GLN A 27 ? ? -146.45 -59.04 168 20 ALA A 29 ? ? -165.97 70.31 169 20 SER A 90 ? ? 62.70 170.32 #