data_2YUJ # _entry.id 2YUJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YUJ pdb_00002yuj 10.2210/pdb2yuj/pdb RCSB RCSB027151 ? ? WWPDB D_1000027151 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-04-15 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2020-01-29 4 'Structure model' 1 3 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' audit_author 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_assembly_prop 6 3 'Structure model' pdbx_struct_oper_list 7 3 'Structure model' struct_ref_seq_dif 8 4 'Structure model' chem_comp_atom 9 4 'Structure model' chem_comp_bond 10 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_audit_author.name' 2 3 'Structure model' '_pdbx_nmr_software.name' 3 3 'Structure model' '_pdbx_nmr_spectrometer.model' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_database_2.pdbx_DOI' 6 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YUJ _pdbx_database_status.recvd_initial_deposition_date 2007-04-06 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hso003008466.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Saito, K.' 1 ? 'Tomizawa, T.' 2 ? 'Kigawa, T.' 3 ? 'Yokoyama, S.' 4 ? 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 5 ? # _citation.id primary _citation.title 'Solution structure of human ubiquitin fusion degradation protein 1 homolog UFD1' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Saito, K.' 1 ? primary 'Tomizawa, T.' 2 ? primary 'Kigawa, T.' 3 ? primary 'Yokoyama, S.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Ubiquitin fusion degradation 1-like' _entity.formula_weight 21274.270 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment UFD1 _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVL EFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYN EKIYELRVMETKPDKAVSIIECDMNVDFDA ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVL EFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYN EKIYELRVMETKPDKAVSIIECDMNVDFDA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hso003008466.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ILE n 1 9 PRO n 1 10 ARG n 1 11 VAL n 1 12 PHE n 1 13 GLN n 1 14 ASN n 1 15 ARG n 1 16 PHE n 1 17 SER n 1 18 THR n 1 19 GLN n 1 20 TYR n 1 21 ARG n 1 22 CYS n 1 23 PHE n 1 24 SER n 1 25 VAL n 1 26 SER n 1 27 MET n 1 28 LEU n 1 29 ALA n 1 30 GLY n 1 31 PRO n 1 32 ASN n 1 33 ASP n 1 34 ARG n 1 35 SER n 1 36 ASP n 1 37 VAL n 1 38 GLU n 1 39 LYS n 1 40 GLY n 1 41 GLY n 1 42 LYS n 1 43 ILE n 1 44 ILE n 1 45 MET n 1 46 PRO n 1 47 PRO n 1 48 SER n 1 49 ALA n 1 50 LEU n 1 51 ASP n 1 52 GLN n 1 53 LEU n 1 54 SER n 1 55 ARG n 1 56 LEU n 1 57 ASN n 1 58 ILE n 1 59 THR n 1 60 TYR n 1 61 PRO n 1 62 MET n 1 63 LEU n 1 64 PHE n 1 65 LYS n 1 66 LEU n 1 67 THR n 1 68 ASN n 1 69 LYS n 1 70 ASN n 1 71 SER n 1 72 ASP n 1 73 ARG n 1 74 MET n 1 75 THR n 1 76 HIS n 1 77 CYS n 1 78 GLY n 1 79 VAL n 1 80 LEU n 1 81 GLU n 1 82 PHE n 1 83 VAL n 1 84 ALA n 1 85 ASP n 1 86 GLU n 1 87 GLY n 1 88 ILE n 1 89 CYS n 1 90 TYR n 1 91 LEU n 1 92 PRO n 1 93 HIS n 1 94 TRP n 1 95 MET n 1 96 MET n 1 97 GLN n 1 98 ASN n 1 99 LEU n 1 100 LEU n 1 101 LEU n 1 102 GLU n 1 103 GLU n 1 104 GLY n 1 105 GLY n 1 106 LEU n 1 107 VAL n 1 108 GLN n 1 109 VAL n 1 110 GLU n 1 111 SER n 1 112 VAL n 1 113 ASN n 1 114 LEU n 1 115 GLN n 1 116 VAL n 1 117 ALA n 1 118 THR n 1 119 TYR n 1 120 SER n 1 121 LYS n 1 122 PHE n 1 123 GLN n 1 124 PRO n 1 125 GLN n 1 126 SER n 1 127 PRO n 1 128 ASP n 1 129 PHE n 1 130 LEU n 1 131 ASP n 1 132 ILE n 1 133 THR n 1 134 ASN n 1 135 PRO n 1 136 LYS n 1 137 ALA n 1 138 VAL n 1 139 LEU n 1 140 GLU n 1 141 ASN n 1 142 ALA n 1 143 LEU n 1 144 ARG n 1 145 ASN n 1 146 PHE n 1 147 ALA n 1 148 CYS n 1 149 LEU n 1 150 THR n 1 151 THR n 1 152 GLY n 1 153 ASP n 1 154 VAL n 1 155 ILE n 1 156 ALA n 1 157 ILE n 1 158 ASN n 1 159 TYR n 1 160 ASN n 1 161 GLU n 1 162 LYS n 1 163 ILE n 1 164 TYR n 1 165 GLU n 1 166 LEU n 1 167 ARG n 1 168 VAL n 1 169 MET n 1 170 GLU n 1 171 THR n 1 172 LYS n 1 173 PRO n 1 174 ASP n 1 175 LYS n 1 176 ALA n 1 177 VAL n 1 178 SER n 1 179 ILE n 1 180 ILE n 1 181 GLU n 1 182 CYS n 1 183 ASP n 1 184 MET n 1 185 ASN n 1 186 VAL n 1 187 ASP n 1 188 PHE n 1 189 ASP n 1 190 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene AB1165_B04 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P061225-60 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'cell-free protein synthesis' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 PHE 12 12 12 PHE PHE A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 ASN 14 14 14 ASN ASN A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 PHE 16 16 16 PHE PHE A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 MET 27 27 27 MET MET A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 ASN 32 32 32 ASN ASN A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 MET 45 45 45 MET MET A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 GLN 52 52 52 GLN GLN A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 MET 62 62 62 MET MET A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 MET 74 74 74 MET MET A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 HIS 76 76 76 HIS HIS A . n A 1 77 CYS 77 77 77 CYS CYS A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 PHE 82 82 82 PHE PHE A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 CYS 89 89 89 CYS CYS A . n A 1 90 TYR 90 90 90 TYR TYR A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 HIS 93 93 93 HIS HIS A . n A 1 94 TRP 94 94 94 TRP TRP A . n A 1 95 MET 95 95 95 MET MET A . n A 1 96 MET 96 96 96 MET MET A . n A 1 97 GLN 97 97 97 GLN GLN A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 VAL 107 107 107 VAL VAL A . n A 1 108 GLN 108 108 108 GLN GLN A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 GLU 110 110 110 GLU GLU A . n A 1 111 SER 111 111 111 SER SER A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 GLN 115 115 115 GLN GLN A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 TYR 119 119 119 TYR TYR A . n A 1 120 SER 120 120 120 SER SER A . n A 1 121 LYS 121 121 121 LYS LYS A . n A 1 122 PHE 122 122 122 PHE PHE A . n A 1 123 GLN 123 123 123 GLN GLN A . n A 1 124 PRO 124 124 124 PRO PRO A . n A 1 125 GLN 125 125 125 GLN GLN A . n A 1 126 SER 126 126 126 SER SER A . n A 1 127 PRO 127 127 127 PRO PRO A . n A 1 128 ASP 128 128 128 ASP ASP A . n A 1 129 PHE 129 129 129 PHE PHE A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 ASP 131 131 131 ASP ASP A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 ASN 134 134 134 ASN ASN A . n A 1 135 PRO 135 135 135 PRO PRO A . n A 1 136 LYS 136 136 136 LYS LYS A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 VAL 138 138 138 VAL VAL A . n A 1 139 LEU 139 139 139 LEU LEU A . n A 1 140 GLU 140 140 140 GLU GLU A . n A 1 141 ASN 141 141 141 ASN ASN A . n A 1 142 ALA 142 142 142 ALA ALA A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 ARG 144 144 144 ARG ARG A . n A 1 145 ASN 145 145 145 ASN ASN A . n A 1 146 PHE 146 146 146 PHE PHE A . n A 1 147 ALA 147 147 147 ALA ALA A . n A 1 148 CYS 148 148 148 CYS CYS A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 THR 150 150 150 THR THR A . n A 1 151 THR 151 151 151 THR THR A . n A 1 152 GLY 152 152 152 GLY GLY A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 VAL 154 154 154 VAL VAL A . n A 1 155 ILE 155 155 155 ILE ILE A . n A 1 156 ALA 156 156 156 ALA ALA A . n A 1 157 ILE 157 157 157 ILE ILE A . n A 1 158 ASN 158 158 158 ASN ASN A . n A 1 159 TYR 159 159 159 TYR TYR A . n A 1 160 ASN 160 160 160 ASN ASN A . n A 1 161 GLU 161 161 161 GLU GLU A . n A 1 162 LYS 162 162 162 LYS LYS A . n A 1 163 ILE 163 163 163 ILE ILE A . n A 1 164 TYR 164 164 164 TYR TYR A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 ARG 167 167 167 ARG ARG A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 MET 169 169 169 MET MET A . n A 1 170 GLU 170 170 170 GLU GLU A . n A 1 171 THR 171 171 171 THR THR A . n A 1 172 LYS 172 172 172 LYS LYS A . n A 1 173 PRO 173 173 173 PRO PRO A . n A 1 174 ASP 174 174 174 ASP ASP A . n A 1 175 LYS 175 175 175 LYS LYS A . n A 1 176 ALA 176 176 176 ALA ALA A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 SER 178 178 178 SER SER A . n A 1 179 ILE 179 179 179 ILE ILE A . n A 1 180 ILE 180 180 180 ILE ILE A . n A 1 181 GLU 181 181 181 GLU GLU A . n A 1 182 CYS 182 182 182 CYS CYS A . n A 1 183 ASP 183 183 183 ASP ASP A . n A 1 184 MET 184 184 184 MET MET A . n A 1 185 ASN 185 185 185 ASN ASN A . n A 1 186 VAL 186 186 186 VAL VAL A . n A 1 187 ASP 187 187 187 ASP ASP A . n A 1 188 PHE 188 188 188 PHE PHE A . n A 1 189 ASP 189 189 189 ASP ASP A . n A 1 190 ALA 190 190 190 ALA ALA A . n # _exptl.entry_id 2YUJ _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _database_PDB_matrix.entry_id 2YUJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2YUJ _struct.title 'Solution structure of human ubiquitin fusion degradation protein 1 homolog UFD1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YUJ _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text ;ubiquitin-dependent proteolytic, degradation, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, PROTEIN BINDING ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q541A5_HUMAN _struct_ref.pdbx_db_accession Q541A5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEG ICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELR VMETKPDKAVSIIECDMNVDFDA ; _struct_ref.pdbx_align_begin 11 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YUJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 190 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q541A5 _struct_ref_seq.db_align_beg 11 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 193 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 190 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YUJ GLY A 1 ? UNP Q541A5 ? ? 'expression tag' 1 1 1 2YUJ SER A 2 ? UNP Q541A5 ? ? 'expression tag' 2 2 1 2YUJ SER A 3 ? UNP Q541A5 ? ? 'expression tag' 3 3 1 2YUJ GLY A 4 ? UNP Q541A5 ? ? 'expression tag' 4 4 1 2YUJ SER A 5 ? UNP Q541A5 ? ? 'expression tag' 5 5 1 2YUJ SER A 6 ? UNP Q541A5 ? ? 'expression tag' 6 6 1 2YUJ GLY A 7 ? UNP Q541A5 ? ? 'expression tag' 7 7 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 11130 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 46 ? LEU A 56 ? PRO A 46 LEU A 56 1 ? 11 HELX_P HELX_P2 2 HIS A 93 ? LEU A 100 ? HIS A 93 LEU A 100 1 ? 8 HELX_P HELX_P3 3 SER A 126 ? ILE A 132 ? SER A 126 ILE A 132 1 ? 7 HELX_P HELX_P4 4 ASN A 134 ? ARG A 144 ? ASN A 134 ARG A 144 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 1 -0.15 2 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 1 0.09 3 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 2 0.03 4 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 2 -0.07 5 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 3 -0.02 6 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 3 0.11 7 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 4 -0.07 8 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 4 -0.01 9 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 5 0.11 10 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 5 0.10 11 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 6 0.09 12 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 6 0.01 13 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 7 -0.14 14 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 7 0.03 15 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 8 -0.04 16 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 8 0.13 17 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 9 0.02 18 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 9 0.00 19 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 10 0.01 20 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 10 -0.04 21 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 11 -0.02 22 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 11 0.04 23 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 12 0.05 24 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 12 0.06 25 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 13 -0.05 26 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 13 -0.08 27 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 14 0.09 28 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 14 0.06 29 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 15 0.02 30 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 15 0.00 31 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 16 0.05 32 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 16 -0.04 33 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 17 -0.13 34 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 17 0.02 35 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 18 0.06 36 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 18 -0.02 37 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 19 0.10 38 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 19 0.08 39 TYR 60 A . ? TYR 60 A PRO 61 A ? PRO 61 A 20 0.12 40 LYS 172 A . ? LYS 172 A PRO 173 A ? PRO 173 A 20 -0.10 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 4 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 17 ? PHE A 23 ? SER A 17 PHE A 23 A 2 CYS A 89 ? TYR A 90 ? CYS A 89 TYR A 90 A 3 LYS A 42 ? ILE A 44 ? LYS A 42 ILE A 44 A 4 ARG A 73 ? GLU A 81 ? ARG A 73 GLU A 81 A 5 LEU A 63 ? ASN A 68 ? LEU A 63 ASN A 68 A 6 GLY A 105 ? VAL A 112 ? GLY A 105 VAL A 112 A 7 SER A 17 ? PHE A 23 ? SER A 17 PHE A 23 B 1 VAL A 154 ? ASN A 158 ? VAL A 154 ASN A 158 B 2 ILE A 163 ? THR A 171 ? ILE A 163 THR A 171 B 3 TYR A 119 ? PRO A 124 ? TYR A 119 PRO A 124 B 4 ASN A 185 ? PHE A 188 ? ASN A 185 PHE A 188 C 1 CYS A 148 ? LEU A 149 ? CYS A 148 LEU A 149 C 2 VAL A 177 ? SER A 178 ? VAL A 177 SER A 178 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 23 ? N PHE A 23 O CYS A 89 ? O CYS A 89 A 2 3 O TYR A 90 ? O TYR A 90 N ILE A 44 ? N ILE A 44 A 3 4 N ILE A 43 ? N ILE A 43 O LEU A 80 ? O LEU A 80 A 4 5 O CYS A 77 ? O CYS A 77 N PHE A 64 ? N PHE A 64 A 5 6 N THR A 67 ? N THR A 67 O GLN A 108 ? O GLN A 108 A 6 7 O GLY A 105 ? O GLY A 105 N CYS A 22 ? N CYS A 22 B 1 2 N ILE A 157 ? N ILE A 157 O TYR A 164 ? O TYR A 164 B 2 3 O GLU A 170 ? O GLU A 170 N LYS A 121 ? N LYS A 121 B 3 4 N SER A 120 ? N SER A 120 O ASN A 185 ? O ASN A 185 C 1 2 N LEU A 149 ? N LEU A 149 O VAL A 177 ? O VAL A 177 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 5 ? ? 60.42 85.11 2 1 ILE A 8 ? ? 56.98 73.60 3 1 PRO A 9 ? ? -52.86 170.65 4 1 ARG A 10 ? ? -164.86 32.43 5 1 PHE A 12 ? ? -134.53 -47.94 6 1 GLN A 13 ? ? -60.93 -177.65 7 1 ALA A 29 ? ? -59.05 177.30 8 1 LYS A 69 ? ? -98.79 31.27 9 1 SER A 71 ? ? -140.28 25.92 10 1 PHE A 82 ? ? -103.51 72.96 11 1 PRO A 92 ? ? -52.37 -176.12 12 1 VAL A 154 ? ? -69.59 86.35 13 1 TYR A 159 ? ? -150.71 -50.03 14 1 ASN A 160 ? ? -96.78 44.35 15 1 GLU A 181 ? ? 61.37 87.63 16 2 SER A 3 ? ? -132.11 -46.37 17 2 ARG A 10 ? ? 60.78 92.34 18 2 PHE A 12 ? ? 61.15 100.63 19 2 GLN A 13 ? ? 59.18 177.70 20 2 ALA A 29 ? ? -166.46 -59.79 21 2 ARG A 34 ? ? 60.39 168.33 22 2 LEU A 66 ? ? -69.99 76.35 23 2 LYS A 69 ? ? -98.57 33.94 24 2 VAL A 83 ? ? -157.39 31.99 25 2 PRO A 92 ? ? -53.41 -173.17 26 2 GLU A 103 ? ? -62.73 84.03 27 2 TYR A 159 ? ? -176.43 -40.42 28 2 ASN A 160 ? ? -105.28 43.36 29 2 GLU A 181 ? ? 60.29 88.18 30 3 SER A 2 ? ? 60.35 174.13 31 3 VAL A 11 ? ? -143.57 48.15 32 3 PHE A 12 ? ? 61.24 82.49 33 3 GLN A 13 ? ? -138.76 -46.92 34 3 ASN A 14 ? ? 60.50 99.61 35 3 ALA A 29 ? ? 59.26 -178.97 36 3 LYS A 69 ? ? -98.52 32.19 37 3 LEU A 80 ? ? -122.09 -63.47 38 3 PHE A 82 ? ? -150.19 79.97 39 3 VAL A 83 ? ? -148.71 31.14 40 3 PRO A 92 ? ? -52.13 178.74 41 3 TYR A 159 ? ? -175.13 -46.99 42 3 ASN A 160 ? ? -100.82 43.14 43 3 GLU A 181 ? ? 60.75 66.10 44 4 PRO A 9 ? ? -72.23 -167.00 45 4 ARG A 10 ? ? 64.48 173.20 46 4 PHE A 16 ? ? -60.47 98.40 47 4 LYS A 69 ? ? -98.50 33.91 48 4 LEU A 80 ? ? -151.56 -58.28 49 4 VAL A 83 ? ? -155.91 32.07 50 4 PRO A 92 ? ? -53.02 -174.38 51 4 GLU A 103 ? ? -67.79 94.35 52 4 THR A 151 ? ? -59.99 107.10 53 4 TYR A 159 ? ? -175.29 -44.09 54 4 ASN A 160 ? ? -101.50 40.75 55 4 GLU A 181 ? ? 61.10 77.50 56 5 SER A 2 ? ? 60.47 -173.84 57 5 LYS A 39 ? ? -91.21 56.19 58 5 MET A 62 ? ? -116.17 61.30 59 5 LEU A 66 ? ? -66.18 88.32 60 5 LYS A 69 ? ? -96.08 42.93 61 5 LEU A 80 ? ? -104.59 -63.25 62 5 VAL A 83 ? ? -156.73 37.80 63 5 GLU A 103 ? ? -65.01 96.11 64 5 PRO A 124 ? ? -49.97 108.58 65 5 TYR A 159 ? ? -164.49 -47.15 66 5 ASN A 160 ? ? -98.93 43.95 67 5 MET A 169 ? ? -121.99 -54.37 68 5 GLU A 181 ? ? 62.19 81.57 69 6 ARG A 10 ? ? -99.14 30.47 70 6 VAL A 11 ? ? -158.95 40.47 71 6 PHE A 12 ? ? -127.75 -58.38 72 6 LYS A 39 ? ? -66.02 79.48 73 6 ASN A 70 ? ? -142.90 -47.48 74 6 LEU A 80 ? ? -129.65 -56.35 75 6 PRO A 92 ? ? -52.30 176.18 76 6 TYR A 159 ? ? -173.98 -44.36 77 6 ASN A 160 ? ? -97.76 38.50 78 6 MET A 169 ? ? -91.37 -62.81 79 6 GLU A 181 ? ? 60.00 79.78 80 7 SER A 2 ? ? -104.25 -66.73 81 7 SER A 3 ? ? -134.56 -69.22 82 7 ASN A 14 ? ? -153.84 -59.75 83 7 ARG A 15 ? ? 62.23 148.15 84 7 SER A 35 ? ? -98.86 31.64 85 7 LYS A 69 ? ? -92.31 49.71 86 7 ASN A 70 ? ? -130.40 -46.13 87 7 THR A 75 ? ? -160.00 108.98 88 7 LEU A 80 ? ? -145.96 -55.99 89 7 VAL A 83 ? ? -150.79 31.01 90 7 PRO A 92 ? ? -52.20 179.56 91 7 PRO A 124 ? ? -50.54 104.76 92 7 THR A 151 ? ? -65.83 94.28 93 7 TYR A 159 ? ? -157.71 -50.19 94 7 ASN A 160 ? ? -96.77 44.18 95 7 GLU A 181 ? ? 60.58 87.26 96 8 SER A 3 ? ? -174.25 -42.03 97 8 SER A 6 ? ? 60.87 159.59 98 8 PRO A 9 ? ? -51.06 91.47 99 8 ARG A 10 ? ? 59.55 -178.46 100 8 PHE A 12 ? ? -144.37 -48.38 101 8 GLN A 13 ? ? -170.68 -38.56 102 8 ASN A 14 ? ? 75.59 -68.05 103 8 ARG A 15 ? ? 63.36 135.74 104 8 PHE A 16 ? ? -62.47 89.48 105 8 ALA A 29 ? ? -104.93 -68.43 106 8 ASP A 33 ? ? -165.23 -44.44 107 8 MET A 62 ? ? -116.38 56.86 108 8 LYS A 69 ? ? -98.69 31.11 109 8 LEU A 80 ? ? -133.33 -62.22 110 8 VAL A 83 ? ? -143.56 31.44 111 8 PRO A 92 ? ? -52.43 -176.80 112 8 GLU A 103 ? ? -59.91 105.40 113 8 THR A 151 ? ? -62.98 96.87 114 8 TYR A 159 ? ? -158.50 -49.75 115 8 ASN A 160 ? ? -97.87 44.50 116 8 GLU A 181 ? ? 60.98 79.70 117 8 CYS A 182 ? ? -176.48 144.14 118 9 SER A 2 ? ? -171.99 141.62 119 9 SER A 5 ? ? -167.57 96.24 120 9 ILE A 8 ? ? -177.56 133.38 121 9 ARG A 10 ? ? -98.89 30.97 122 9 PHE A 12 ? ? -146.61 -56.12 123 9 ALA A 29 ? ? -172.46 -178.78 124 9 ARG A 34 ? ? -174.45 -40.65 125 9 MET A 62 ? ? -115.76 66.68 126 9 LEU A 66 ? ? -60.90 94.16 127 9 ASN A 70 ? ? -174.08 -41.34 128 9 LEU A 80 ? ? -137.55 -59.13 129 9 PRO A 92 ? ? -51.95 179.80 130 9 ASN A 134 ? ? -114.48 77.71 131 9 TYR A 159 ? ? -161.30 -48.15 132 9 ASN A 160 ? ? -101.66 44.93 133 9 GLU A 181 ? ? 61.59 78.38 134 9 CYS A 182 ? ? -172.08 148.43 135 10 SER A 2 ? ? 60.71 85.64 136 10 SER A 6 ? ? 59.87 175.08 137 10 ILE A 8 ? ? 68.82 84.28 138 10 ARG A 10 ? ? -153.11 38.94 139 10 ARG A 15 ? ? 60.53 159.58 140 10 SER A 17 ? ? -158.56 85.31 141 10 ALA A 29 ? ? 60.97 176.40 142 10 LEU A 66 ? ? -68.03 77.50 143 10 LEU A 80 ? ? -133.44 -60.71 144 10 PRO A 92 ? ? -51.84 177.67 145 10 GLU A 103 ? ? -59.92 88.71 146 10 TYR A 159 ? ? -177.29 -37.46 147 10 MET A 169 ? ? -121.35 -57.68 148 10 GLU A 181 ? ? 60.26 89.01 149 11 SER A 2 ? ? 60.35 102.99 150 11 SER A 5 ? ? -101.79 -74.23 151 11 PHE A 12 ? ? 59.88 160.14 152 11 GLN A 13 ? ? -166.70 119.13 153 11 ALA A 29 ? ? 58.90 -175.33 154 11 LYS A 69 ? ? -97.75 38.07 155 11 LEU A 80 ? ? -124.85 -56.49 156 11 PHE A 82 ? ? -118.01 67.82 157 11 PRO A 92 ? ? -52.25 170.64 158 11 GLU A 103 ? ? -65.31 81.39 159 11 ASN A 134 ? ? -117.62 79.97 160 11 THR A 151 ? ? -69.34 97.44 161 11 TYR A 159 ? ? -171.69 -46.10 162 11 ASN A 160 ? ? -96.72 40.31 163 11 GLU A 181 ? ? 60.47 87.17 164 12 SER A 2 ? ? 60.43 -178.46 165 12 SER A 3 ? ? -102.85 -71.72 166 12 SER A 5 ? ? -105.68 -69.90 167 12 SER A 6 ? ? -160.62 105.28 168 12 LYS A 69 ? ? -97.66 38.26 169 12 ASN A 70 ? ? -142.61 -47.50 170 12 LEU A 80 ? ? -129.09 -61.91 171 12 VAL A 83 ? ? -142.51 32.48 172 12 PRO A 92 ? ? -51.86 -177.58 173 12 GLU A 103 ? ? -59.90 101.13 174 12 TYR A 159 ? ? -167.45 -48.39 175 12 ASN A 160 ? ? -95.52 41.85 176 12 GLU A 181 ? ? 61.49 81.94 177 13 SER A 2 ? ? 62.14 149.59 178 13 SER A 3 ? ? 59.80 96.73 179 13 SER A 5 ? ? 60.65 88.87 180 13 PHE A 12 ? ? -99.46 31.33 181 13 GLN A 13 ? ? -106.99 -60.24 182 13 ASN A 14 ? ? 60.58 178.17 183 13 ARG A 34 ? ? 62.13 145.42 184 13 LYS A 69 ? ? -98.70 31.40 185 13 PRO A 92 ? ? -53.07 -174.12 186 13 GLU A 103 ? ? -60.06 91.75 187 13 ASN A 134 ? ? -119.51 77.31 188 13 TYR A 159 ? ? -161.89 -47.21 189 13 ASN A 160 ? ? -93.75 45.19 190 13 GLU A 181 ? ? 61.36 75.35 191 14 SER A 2 ? ? -142.90 -69.93 192 14 SER A 3 ? ? 59.40 101.29 193 14 SER A 6 ? ? 62.29 119.43 194 14 ARG A 10 ? ? 48.09 -168.97 195 14 ARG A 15 ? ? 61.14 166.82 196 14 SER A 17 ? ? -160.03 112.80 197 14 LEU A 28 ? ? -58.91 91.09 198 14 ALA A 29 ? ? 65.38 -76.59 199 14 ASP A 33 ? ? -155.67 -68.50 200 14 LYS A 69 ? ? -98.14 35.58 201 14 SER A 71 ? ? -151.94 29.72 202 14 LEU A 80 ? ? -131.29 -56.65 203 14 PRO A 92 ? ? -52.28 -176.04 204 14 PRO A 124 ? ? -49.62 107.33 205 14 TYR A 159 ? ? -149.73 -47.42 206 14 ASN A 160 ? ? -100.42 44.31 207 14 GLU A 181 ? ? 60.84 88.36 208 15 SER A 2 ? ? 60.37 106.15 209 15 GLN A 13 ? ? -177.26 -39.50 210 15 ASN A 14 ? ? -90.23 51.58 211 15 ASN A 32 ? ? -156.88 -74.48 212 15 SER A 35 ? ? -98.17 35.77 213 15 MET A 62 ? ? -112.46 53.70 214 15 LYS A 69 ? ? -98.87 31.56 215 15 LEU A 80 ? ? -136.43 -59.08 216 15 VAL A 83 ? ? -150.96 31.01 217 15 PRO A 92 ? ? -53.48 -172.37 218 15 ASN A 134 ? ? -113.44 78.65 219 15 TYR A 159 ? ? -158.01 -47.28 220 15 ASN A 160 ? ? -108.76 43.99 221 15 GLU A 181 ? ? 61.26 85.08 222 16 PRO A 9 ? ? -52.83 109.59 223 16 ASN A 14 ? ? -96.11 42.58 224 16 LEU A 28 ? ? -62.80 87.01 225 16 ASP A 33 ? ? 62.86 120.56 226 16 LEU A 66 ? ? -69.62 75.18 227 16 LYS A 69 ? ? -97.96 33.58 228 16 ASN A 70 ? ? -131.62 -46.10 229 16 PRO A 92 ? ? -52.69 -174.89 230 16 PRO A 124 ? ? -51.66 102.44 231 16 TYR A 159 ? ? -176.54 -38.60 232 16 ASN A 160 ? ? -99.20 40.30 233 16 ILE A 163 ? ? -68.47 94.43 234 17 SER A 5 ? ? 60.47 174.06 235 17 PHE A 12 ? ? -157.04 78.06 236 17 ARG A 15 ? ? 61.36 113.93 237 17 ALA A 29 ? ? 59.93 -174.67 238 17 LYS A 69 ? ? -98.92 32.17 239 17 LEU A 80 ? ? -130.41 -59.74 240 17 PRO A 92 ? ? -53.57 -172.64 241 17 GLU A 103 ? ? -59.85 92.46 242 17 ASN A 134 ? ? -119.07 75.75 243 17 TYR A 159 ? ? -177.43 -47.01 244 17 ASN A 160 ? ? -103.02 42.65 245 17 THR A 171 ? ? -160.07 119.08 246 17 GLU A 181 ? ? 60.94 78.76 247 18 SER A 3 ? ? 60.24 105.86 248 18 PHE A 12 ? ? -132.21 -46.79 249 18 ARG A 15 ? ? 63.61 167.23 250 18 ARG A 34 ? ? 60.24 109.06 251 18 LYS A 69 ? ? -98.46 30.56 252 18 PRO A 124 ? ? -49.80 109.90 253 18 TYR A 159 ? ? -172.71 -48.31 254 18 ASN A 160 ? ? -97.66 41.44 255 18 MET A 169 ? ? -94.00 -68.53 256 18 ILE A 180 ? ? -111.65 79.97 257 18 GLU A 181 ? ? 59.14 91.00 258 19 SER A 2 ? ? -170.26 -42.70 259 19 SER A 5 ? ? 60.61 172.11 260 19 SER A 6 ? ? -157.24 37.67 261 19 VAL A 11 ? ? -97.88 32.05 262 19 ARG A 15 ? ? 60.50 158.67 263 19 ASP A 33 ? ? 70.85 -62.63 264 19 ARG A 34 ? ? 66.95 133.13 265 19 LYS A 39 ? ? -97.93 33.72 266 19 ASN A 70 ? ? -145.22 -53.49 267 19 LEU A 80 ? ? -134.90 -54.79 268 19 VAL A 83 ? ? -149.93 35.23 269 19 GLU A 86 ? ? -65.66 90.96 270 19 PRO A 92 ? ? -53.36 -173.24 271 19 TYR A 159 ? ? -149.02 -50.17 272 19 ASN A 160 ? ? -100.81 49.34 273 19 GLU A 181 ? ? 60.36 89.72 274 20 ILE A 8 ? ? 63.65 88.37 275 20 ASN A 14 ? ? -128.56 -66.85 276 20 ARG A 15 ? ? 57.99 176.11 277 20 LEU A 28 ? ? -52.18 108.90 278 20 ASN A 32 ? ? 59.71 173.29 279 20 MET A 62 ? ? -115.74 74.88 280 20 LYS A 69 ? ? -98.31 32.40 281 20 ASN A 70 ? ? -131.93 -46.07 282 20 VAL A 83 ? ? -141.90 31.28 283 20 PRO A 92 ? ? -52.90 -174.70 284 20 LEU A 100 ? ? 61.26 65.35 285 20 GLU A 103 ? ? -64.85 85.49 286 20 TYR A 159 ? ? -152.77 -47.47 287 20 ASN A 160 ? ? -99.46 45.19 288 20 GLU A 181 ? ? 61.40 80.58 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_nmr_ensemble.entry_id 2YUJ _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2YUJ _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1mM protein, 20mM d-Tris-HCl, 100mM NaCl, 1mM d-DTT, 0.02% NaN3; 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120 _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection TopSpin 1.3 bruker 1 processing NMRPipe 2006 delaglio 2 'data analysis' NMRView 5 johnson 3 'structure solution' CNS 1.1 ? 4 refinement CNS 1.1 ? 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 900 _pdbx_nmr_spectrometer.type ? # _atom_sites.entry_id 2YUJ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_