HEADER TRANSFERASE 06-APR-07 2YUK TITLE SOLUTION STRUCTURE OF THE HMG BOX OF HUMAN MYELOID/LYMPHOID OR MIXED- TITLE 2 LINEAGE LEUKEMIA PROTEIN 3 HOMOLOG COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYELOID/LYMPHOID OR MIXED-LINEAGE LEUKEMIA PROTEIN 3 COMPND 3 HOMOLOG; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: HMG (HIGH MOBILITY GROUP) BOX, UNP RESIDUES 1631-1713; COMPND 6 SYNONYM: HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-4 SPECIFIC COMPND 7 MLL3, HOMOLOGOUS TO ALR PROTEIN; COMPND 8 EC: 2.1.1.43; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MLL3; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P060327-10; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-4 SPECIFIC MLL3, KEYWDS 2 HOMOLOGOUS TO ALR PROTEIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL KEYWDS 3 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 4 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.ABE,N.TOCHIO,K.MIYAMOTO,S.KOSHIBA,T.HARADA,S.WATANABE,T.KIGAWA, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 29-MAY-24 2YUK 1 REMARK REVDAT 3 16-MAR-22 2YUK 1 REMARK SEQADV REVDAT 2 24-FEB-09 2YUK 1 VERSN REVDAT 1 08-APR-08 2YUK 0 JRNL AUTH H.ABE,N.TOCHIO,K.MIYAMOTO,S.KOSHIBA,T.HARADA,S.WATANABE, JRNL AUTH 2 T.KIGAWA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE HMG BOX OF HUMAN MYELOID/LYMPHOID JRNL TITL 2 OR MIXED-LINEAGE LEUKEMIA PROTEIN 3 HOMOLOG JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0.17 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YUK COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000027152. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.11MM PROTEIN; 20MM D-TRIS-HCL; REMARK 210 100MM NACL; 1MM D-DTT; 0.02% REMARK 210 NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20031121, NMNMRVIEW REMARK 210 5.0.4, KUJIRA 0.9747, CYANA REMARK 210 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 6 121.03 -35.56 REMARK 500 1 GLN A 10 106.93 -173.41 REMARK 500 1 ILE A 36 -65.14 -92.58 REMARK 500 1 ILE A 83 -73.54 -68.10 REMARK 500 1 ASN A 84 -179.89 -54.31 REMARK 500 2 ILE A 36 -63.01 -92.58 REMARK 500 2 ILE A 55 -35.26 -38.85 REMARK 500 2 LYS A 85 44.29 32.62 REMARK 500 3 LEU A 14 -57.64 -129.32 REMARK 500 3 ALA A 26 123.23 -36.10 REMARK 500 3 ILE A 36 -64.05 -90.46 REMARK 500 3 ILE A 55 -34.35 -37.50 REMARK 500 3 LYS A 85 124.00 -171.67 REMARK 500 3 VAL A 86 101.90 -38.41 REMARK 500 4 ARG A 11 157.17 -41.67 REMARK 500 4 LEU A 14 -60.69 -98.65 REMARK 500 4 ALA A 26 125.04 -35.43 REMARK 500 4 ILE A 36 -61.10 -92.64 REMARK 500 5 ALA A 9 41.35 -86.07 REMARK 500 5 LYS A 85 46.04 38.15 REMARK 500 6 SER A 6 100.24 -47.24 REMARK 500 6 THR A 13 36.87 -83.90 REMARK 500 6 SER A 89 48.26 -88.12 REMARK 500 7 THR A 13 34.33 -83.68 REMARK 500 7 ALA A 26 121.49 -33.62 REMARK 500 7 ASN A 84 -175.64 -61.62 REMARK 500 8 ARG A 11 170.17 -50.57 REMARK 500 8 ALA A 26 125.34 -39.35 REMARK 500 8 ILE A 36 -64.51 -93.41 REMARK 500 8 ILE A 55 -32.14 -39.11 REMARK 500 8 ASN A 84 88.26 -65.39 REMARK 500 9 ASN A 8 114.57 -161.11 REMARK 500 9 ILE A 36 -60.71 -90.40 REMARK 500 9 GLN A 87 44.82 -89.52 REMARK 500 10 ASN A 8 87.24 -62.06 REMARK 500 10 LEU A 14 -35.28 -35.68 REMARK 500 10 GLU A 17 -39.24 -37.03 REMARK 500 10 ILE A 36 -65.22 -91.68 REMARK 500 10 ILE A 55 -38.32 -36.37 REMARK 500 11 SER A 2 124.29 -170.66 REMARK 500 11 GLN A 10 45.01 -92.95 REMARK 500 11 ARG A 11 176.81 -51.15 REMARK 500 11 ALA A 26 124.24 -37.29 REMARK 500 11 ILE A 55 -34.56 -36.30 REMARK 500 11 LYS A 85 98.36 -60.28 REMARK 500 12 ILE A 36 -64.23 -91.41 REMARK 500 13 ILE A 36 -62.53 -92.68 REMARK 500 13 ILE A 55 -33.37 -36.23 REMARK 500 13 LYS A 85 150.76 -34.94 REMARK 500 13 VAL A 86 143.96 -171.49 REMARK 500 REMARK 500 THIS ENTRY HAS 72 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002201478.1 RELATED DB: TARGETDB DBREF 2YUK A 8 90 UNP Q8NEZ4 MLL3_HUMAN 1631 1713 SEQADV 2YUK GLY A 1 UNP Q8NEZ4 EXPRESSION TAG SEQADV 2YUK SER A 2 UNP Q8NEZ4 EXPRESSION TAG SEQADV 2YUK SER A 3 UNP Q8NEZ4 EXPRESSION TAG SEQADV 2YUK GLY A 4 UNP Q8NEZ4 EXPRESSION TAG SEQADV 2YUK SER A 5 UNP Q8NEZ4 EXPRESSION TAG SEQADV 2YUK SER A 6 UNP Q8NEZ4 EXPRESSION TAG SEQADV 2YUK GLY A 7 UNP Q8NEZ4 EXPRESSION TAG SEQRES 1 A 90 GLY SER SER GLY SER SER GLY ASN ALA GLN ARG SER THR SEQRES 2 A 90 LEU LYS TRP GLU LYS GLU GLU ALA LEU GLY GLU MET ALA SEQRES 3 A 90 THR VAL ALA PRO VAL LEU TYR THR ASN ILE ASN PHE PRO SEQRES 4 A 90 ASN LEU LYS GLU GLU PHE PRO ASP TRP THR THR ARG VAL SEQRES 5 A 90 LYS GLN ILE ALA LYS LEU TRP ARG LYS ALA SER SER GLN SEQRES 6 A 90 GLU ARG ALA PRO TYR VAL GLN LYS ALA ARG ASP ASN ARG SEQRES 7 A 90 ALA ALA LEU ARG ILE ASN LYS VAL GLN MET SER ASN HELIX 1 1 SER A 12 GLY A 23 1 12 HELIX 2 2 GLU A 24 ALA A 26 5 3 HELIX 3 3 ALA A 29 PHE A 38 1 10 HELIX 4 4 ASN A 40 PHE A 45 1 6 HELIX 5 5 ASP A 47 ALA A 62 1 16 HELIX 6 6 SER A 63 ASN A 84 1 22 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1