data_2YUP # _entry.id 2YUP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YUP pdb_00002yup 10.2210/pdb2yup/pdb RCSB RCSB027157 ? ? WWPDB D_1000027157 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsi002012305.3 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YUP _pdbx_database_status.recvd_initial_deposition_date 2007-04-06 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Abe, H.' 1 'Tochio, N.' 2 'Miyamoto, K.' 3 'Saito, K.' 4 'Sasagawa, A.' 5 'Koshiba, S.' 6 'Inoue, M.' 7 'Kigawa, T.' 8 'Yokoyama, S.' 9 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 10 # _citation.id primary _citation.title 'Solution structure of the second SH3 domain of human Vinexin' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Abe, H.' 1 ? primary 'Tochio, N.' 2 ? primary 'Miyamoto, K.' 3 ? primary 'Saito, K.' 4 ? primary 'Sasagawa, A.' 5 ? primary 'Koshiba, S.' 6 ? primary 'Inoue, M.' 7 ? primary 'Kigawa, T.' 8 ? primary 'Yokoyama, S.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Vinexin _entity.formula_weight 9927.001 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'SH3 domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGKPPTYQVLEYGEAVAQYTFKGDLEVELSFRKGEHICLIRKVNENWYEGRITGTGRQGIFPASYVQVSREPRLR LCDDSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGKPPTYQVLEYGEAVAQYTFKGDLEVELSFRKGEHICLIRKVNENWYEGRITGTGRQGIFPASYVQVSREPRLR LCDDSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsi002012305.3 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 LYS n 1 9 PRO n 1 10 PRO n 1 11 THR n 1 12 TYR n 1 13 GLN n 1 14 VAL n 1 15 LEU n 1 16 GLU n 1 17 TYR n 1 18 GLY n 1 19 GLU n 1 20 ALA n 1 21 VAL n 1 22 ALA n 1 23 GLN n 1 24 TYR n 1 25 THR n 1 26 PHE n 1 27 LYS n 1 28 GLY n 1 29 ASP n 1 30 LEU n 1 31 GLU n 1 32 VAL n 1 33 GLU n 1 34 LEU n 1 35 SER n 1 36 PHE n 1 37 ARG n 1 38 LYS n 1 39 GLY n 1 40 GLU n 1 41 HIS n 1 42 ILE n 1 43 CYS n 1 44 LEU n 1 45 ILE n 1 46 ARG n 1 47 LYS n 1 48 VAL n 1 49 ASN n 1 50 GLU n 1 51 ASN n 1 52 TRP n 1 53 TYR n 1 54 GLU n 1 55 GLY n 1 56 ARG n 1 57 ILE n 1 58 THR n 1 59 GLY n 1 60 THR n 1 61 GLY n 1 62 ARG n 1 63 GLN n 1 64 GLY n 1 65 ILE n 1 66 PHE n 1 67 PRO n 1 68 ALA n 1 69 SER n 1 70 TYR n 1 71 VAL n 1 72 GLN n 1 73 VAL n 1 74 SER n 1 75 ARG n 1 76 GLU n 1 77 PRO n 1 78 ARG n 1 79 LEU n 1 80 ARG n 1 81 LEU n 1 82 CYS n 1 83 ASP n 1 84 ASP n 1 85 SER n 1 86 GLY n 1 87 PRO n 1 88 SER n 1 89 SER n 1 90 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene SORBS3 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P050627-09 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code VINEX_HUMAN _struct_ref.pdbx_db_accession O60504 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code KPPTYQVLEYGEAVAQYTFKGDLEVELSFRKGEHICLIRKVNENWYEGRITGTGRQGIFPASYVQVSREPRLRLCDD _struct_ref.pdbx_align_begin 447 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YUP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 84 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O60504 _struct_ref_seq.db_align_beg 447 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 523 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 84 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YUP GLY A 1 ? UNP O60504 ? ? 'expression tag' 1 1 1 2YUP SER A 2 ? UNP O60504 ? ? 'expression tag' 2 2 1 2YUP SER A 3 ? UNP O60504 ? ? 'expression tag' 3 3 1 2YUP GLY A 4 ? UNP O60504 ? ? 'expression tag' 4 4 1 2YUP SER A 5 ? UNP O60504 ? ? 'expression tag' 5 5 1 2YUP SER A 6 ? UNP O60504 ? ? 'expression tag' 6 6 1 2YUP GLY A 7 ? UNP O60504 ? ? 'expression tag' 7 7 1 2YUP SER A 85 ? UNP O60504 ? ? 'expression tag' 85 8 1 2YUP GLY A 86 ? UNP O60504 ? ? 'expression tag' 86 9 1 2YUP PRO A 87 ? UNP O60504 ? ? 'expression tag' 87 10 1 2YUP SER A 88 ? UNP O60504 ? ? 'expression tag' 88 11 1 2YUP SER A 89 ? UNP O60504 ? ? 'expression tag' 89 12 1 2YUP GLY A 90 ? UNP O60504 ? ? 'expression tag' 90 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.00mM Protein; 20mM d-Tris-HCl; 100mM NaCl; 1mM d-DTT; 0.02% NaN3 ;90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 2YUP _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2YUP _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 2YUP _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20031121 'Delaglio, F' 2 'data analysis' NMNMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9747 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guntert, P.' 5 refinement CYANA 2.0.17 'Guntert, P.' 6 # _exptl.entry_id 2YUP _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2YUP _struct.title 'Solution structure of the second SH3 domain of human Vinexin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YUP _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text ;Sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, CELL ADHESION ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id GLN _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 13 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id TYR _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 17 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id GLN _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 13 _struct_conf.end_auth_comp_id TYR _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 17 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 41 ? LEU A 44 ? HIS A 41 LEU A 44 A 2 GLY A 18 ? ALA A 22 ? GLY A 18 ALA A 22 A 3 VAL A 71 ? ARG A 75 ? VAL A 71 ARG A 75 B 1 TRP A 52 ? ARG A 56 ? TRP A 52 ARG A 56 B 2 GLN A 63 ? PRO A 67 ? GLN A 63 PRO A 67 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 44 ? O LEU A 44 N GLY A 18 ? N GLY A 18 A 2 3 N GLU A 19 ? N GLU A 19 O ARG A 75 ? O ARG A 75 B 1 2 N TYR A 53 ? N TYR A 53 O PHE A 66 ? O PHE A 66 # _database_PDB_matrix.entry_id 2YUP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YUP _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 TYR 12 12 12 TYR TYR A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 TYR 17 17 17 TYR TYR A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 GLN 23 23 23 GLN GLN A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 ARG 37 37 37 ARG ARG A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 HIS 41 41 41 HIS HIS A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 CYS 43 43 43 CYS CYS A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 ASN 49 49 49 ASN ASN A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 TRP 52 52 52 TRP TRP A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 THR 60 60 60 THR THR A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 GLN 63 63 63 GLN GLN A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 PHE 66 66 66 PHE PHE A . n A 1 67 PRO 67 67 67 PRO PRO A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 TYR 70 70 70 TYR TYR A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 GLN 72 72 72 GLN GLN A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 ARG 78 78 78 ARG ARG A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 CYS 82 82 82 CYS CYS A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 ASP 84 84 84 ASP ASP A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 PRO 87 87 87 PRO PRO A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 GLY 90 90 90 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' 5 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 6 ? ? -173.46 124.42 2 1 VAL A 14 ? ? -37.57 -34.13 3 1 LEU A 15 ? ? -35.27 -34.12 4 1 ILE A 45 ? ? -92.11 -61.15 5 1 ASN A 51 ? ? -98.71 -68.49 6 1 ILE A 57 ? ? -110.47 75.44 7 1 ARG A 62 ? ? -36.11 152.39 8 1 PRO A 77 ? ? -69.74 -170.74 9 2 GLU A 40 ? ? -41.24 150.95 10 2 ILE A 45 ? ? -81.87 -71.87 11 2 PRO A 77 ? ? -69.77 -173.02 12 2 ARG A 78 ? ? -77.72 -70.09 13 2 LEU A 79 ? ? 34.89 46.41 14 2 ARG A 80 ? ? 34.46 48.82 15 2 PRO A 87 ? ? -69.79 85.16 16 3 TYR A 12 ? ? -51.87 92.64 17 3 GLN A 13 ? ? -34.48 95.35 18 3 VAL A 14 ? ? -38.23 122.49 19 3 GLU A 16 ? ? -123.08 -51.45 20 3 LYS A 38 ? ? -35.79 120.69 21 3 ILE A 45 ? ? -84.60 -74.50 22 3 THR A 58 ? ? -44.31 162.27 23 3 SER A 69 ? ? -38.95 -26.12 24 3 PRO A 77 ? ? -69.76 -179.67 25 3 ARG A 78 ? ? -66.44 -73.68 26 3 LEU A 79 ? ? 34.51 49.26 27 4 TYR A 12 ? ? -172.25 117.15 28 4 VAL A 14 ? ? -79.49 45.59 29 4 PHE A 36 ? ? -170.23 148.71 30 4 PRO A 87 ? ? -69.77 2.91 31 5 SER A 6 ? ? -125.04 -51.37 32 5 VAL A 14 ? ? -82.32 44.02 33 5 THR A 58 ? ? -36.86 121.84 34 5 GLN A 63 ? ? -170.55 122.01 35 5 SER A 69 ? ? -37.64 -38.71 36 5 ARG A 80 ? ? -54.49 84.10 37 6 PRO A 10 ? ? -69.86 97.84 38 6 GLU A 16 ? ? -86.76 35.15 39 6 LYS A 47 ? ? -38.42 121.96 40 6 ARG A 62 ? ? -37.96 143.76 41 6 ARG A 80 ? ? -167.20 117.33 42 6 ASP A 84 ? ? -62.24 93.73 43 7 TYR A 12 ? ? -38.13 112.60 44 7 GLN A 13 ? ? -52.00 109.37 45 7 VAL A 14 ? ? -34.49 138.63 46 7 LEU A 15 ? ? -105.39 -60.98 47 7 GLU A 16 ? ? -100.00 -61.46 48 7 TYR A 17 ? ? -34.73 138.45 49 7 PHE A 36 ? ? -175.02 139.81 50 7 LYS A 47 ? ? -64.49 91.41 51 7 LEU A 79 ? ? -32.51 92.48 52 7 ARG A 80 ? ? 33.53 54.44 53 8 THR A 11 ? ? -125.13 -50.10 54 8 TYR A 12 ? ? -172.74 114.58 55 8 VAL A 14 ? ? -61.75 75.83 56 8 LEU A 15 ? ? -90.88 42.11 57 8 GLU A 16 ? ? -68.51 84.24 58 8 LEU A 30 ? ? -45.84 172.33 59 8 ILE A 45 ? ? -77.66 -72.01 60 8 THR A 58 ? ? -45.13 158.01 61 8 ARG A 62 ? ? -39.10 144.70 62 8 ARG A 80 ? ? 38.11 38.28 63 8 SER A 88 ? ? -48.62 157.42 64 9 THR A 11 ? ? -132.69 -59.35 65 9 TYR A 12 ? ? -174.83 122.69 66 9 LEU A 15 ? ? -38.30 117.60 67 9 LYS A 38 ? ? -36.09 149.72 68 9 GLU A 40 ? ? -42.95 155.39 69 9 LYS A 47 ? ? -58.43 94.15 70 9 ILE A 57 ? ? -115.96 78.37 71 9 THR A 58 ? ? -35.57 110.31 72 9 GLN A 63 ? ? -172.14 122.43 73 9 PRO A 77 ? ? -69.66 -176.79 74 9 LEU A 81 ? ? 34.27 49.28 75 9 PRO A 87 ? ? -69.77 95.04 76 10 SER A 5 ? ? -51.26 87.74 77 10 LYS A 8 ? ? -41.44 153.85 78 10 PRO A 10 ? ? -69.84 83.54 79 10 TYR A 12 ? ? -59.55 91.72 80 10 GLN A 13 ? ? -95.45 40.90 81 10 ASP A 29 ? ? -133.21 -34.84 82 10 GLU A 31 ? ? -40.30 -71.15 83 10 ILE A 45 ? ? -70.86 -70.11 84 10 ASN A 51 ? ? -126.45 -54.35 85 10 ARG A 62 ? ? -38.02 131.27 86 10 SER A 69 ? ? -37.51 -35.57 87 10 LEU A 79 ? ? -91.21 49.84 88 10 ARG A 80 ? ? 34.56 41.81 89 10 LEU A 81 ? ? -84.44 37.31 90 10 CYS A 82 ? ? -44.94 109.11 91 11 TYR A 12 ? ? -69.36 92.92 92 11 LEU A 15 ? ? -36.85 -35.51 93 11 GLU A 33 ? ? -64.31 91.34 94 11 GLU A 40 ? ? -39.15 153.60 95 11 ASN A 51 ? ? -120.22 -53.39 96 11 PRO A 77 ? ? -69.78 -177.27 97 11 LEU A 81 ? ? -108.49 40.62 98 12 PRO A 10 ? ? -69.73 83.24 99 12 VAL A 14 ? ? -109.74 74.57 100 12 GLU A 16 ? ? -92.43 31.06 101 12 LYS A 47 ? ? -38.76 111.99 102 12 ARG A 62 ? ? -34.52 142.48 103 12 PRO A 77 ? ? -69.77 -176.32 104 12 LEU A 79 ? ? -130.74 -49.81 105 13 PRO A 10 ? ? -69.69 2.46 106 13 VAL A 14 ? ? 34.07 42.79 107 13 LEU A 15 ? ? -39.79 131.74 108 13 ILE A 45 ? ? -72.47 -71.22 109 13 ILE A 57 ? ? -113.16 65.34 110 13 THR A 58 ? ? -35.03 133.15 111 13 PRO A 77 ? ? -69.78 -163.94 112 13 LEU A 79 ? ? -130.62 -50.10 113 13 ARG A 80 ? ? -169.07 107.92 114 13 CYS A 82 ? ? 34.35 36.58 115 13 ASP A 83 ? ? -45.06 100.29 116 13 ASP A 84 ? ? -38.86 119.26 117 14 SER A 3 ? ? -107.15 46.04 118 14 TYR A 12 ? ? -55.11 89.44 119 14 VAL A 14 ? ? -81.87 37.97 120 14 LYS A 38 ? ? -36.45 126.85 121 14 GLU A 40 ? ? -49.22 154.03 122 14 LYS A 47 ? ? -40.38 106.19 123 14 ASN A 51 ? ? -125.68 -52.01 124 14 THR A 58 ? ? -34.04 116.20 125 14 GLN A 63 ? ? -173.35 119.24 126 14 SER A 69 ? ? -38.89 -26.30 127 14 ARG A 80 ? ? -168.92 112.98 128 14 LEU A 81 ? ? -51.59 101.80 129 15 PRO A 10 ? ? -69.78 -174.71 130 15 THR A 11 ? ? -120.67 -56.52 131 15 LEU A 15 ? ? -39.60 113.67 132 15 GLU A 33 ? ? -68.60 87.45 133 15 LYS A 38 ? ? -39.94 125.59 134 15 GLU A 40 ? ? -45.88 159.67 135 15 ILE A 57 ? ? -114.48 69.52 136 15 LEU A 79 ? ? -120.36 -63.71 137 15 LEU A 81 ? ? -91.68 48.14 138 16 SER A 6 ? ? -97.23 -65.64 139 16 THR A 11 ? ? -133.22 -51.19 140 16 VAL A 14 ? ? 33.83 39.53 141 16 LYS A 38 ? ? -34.67 125.88 142 16 GLU A 76 ? ? -38.06 144.40 143 17 SER A 3 ? ? -48.07 174.36 144 17 TYR A 12 ? ? -35.53 121.02 145 17 GLU A 16 ? ? -87.90 34.62 146 17 LYS A 47 ? ? -60.16 97.68 147 17 ILE A 57 ? ? -67.78 85.20 148 17 THR A 58 ? ? -40.71 103.74 149 17 GLN A 63 ? ? -170.56 121.88 150 17 SER A 69 ? ? -37.73 -36.71 151 17 ARG A 80 ? ? 34.39 52.84 152 18 PRO A 10 ? ? -69.75 97.06 153 18 TYR A 12 ? ? 37.59 51.67 154 18 LEU A 15 ? ? -46.28 162.05 155 18 LYS A 38 ? ? -47.52 156.21 156 18 GLU A 40 ? ? -42.61 163.03 157 18 THR A 58 ? ? -34.69 141.25 158 18 PRO A 77 ? ? -69.70 -166.28 159 18 ARG A 78 ? ? -84.02 -74.39 160 18 LEU A 79 ? ? 35.14 37.92 161 19 VAL A 14 ? ? -36.01 -30.69 162 19 LEU A 15 ? ? -36.86 149.86 163 19 THR A 58 ? ? -43.85 155.42 164 19 SER A 69 ? ? -39.37 -27.84 165 19 PRO A 77 ? ? -69.78 -168.42 166 19 LEU A 79 ? ? -104.54 45.04 167 19 LEU A 81 ? ? 34.62 37.82 168 19 CYS A 82 ? ? -36.47 142.13 169 19 ASP A 83 ? ? -38.89 104.65 170 20 THR A 11 ? ? -167.32 115.21 171 20 LEU A 15 ? ? -34.35 113.52 172 20 TYR A 17 ? ? -64.33 -178.45 173 20 LYS A 38 ? ? -39.78 126.26 174 20 GLU A 40 ? ? -46.73 151.59 175 20 LEU A 44 ? ? -62.72 86.21 176 20 ASN A 51 ? ? -131.47 -43.38 177 20 SER A 69 ? ? -39.25 -26.14 178 20 LEU A 79 ? ? 39.51 54.88 179 20 LEU A 81 ? ? -39.49 -28.58 180 20 SER A 85 ? ? -47.15 155.32 #