data_2YWN # _entry.id 2YWN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2YWN RCSB RCSB027227 WWPDB D_1000027227 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id sto001001785.2 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YWN _pdbx_database_status.recvd_initial_deposition_date 2007-04-20 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ebihara, A.' 1 'Manzoku, M.' 2 'Fujimoto, Y.' 3 'Yokoyama, S.' 4 'Kuramitsu, S.' 5 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 6 # _citation.id primary _citation.title 'Crystal structure of peroxiredoxin-like protein from Sulfolobus tokodaii' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Ebihara, A.' 1 primary 'Manzoku, M.' 2 primary 'Fujimoto, Y.' 3 primary 'Yokoyama, S.' 4 primary 'Kuramitsu, S.' 5 # _cell.entry_id 2YWN _cell.length_a 69.34 _cell.length_b 78.67 _cell.length_c 61.97 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2YWN _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Peroxiredoxin-like protein' 17816.660 1 ? ? ? ? 2 water nat water 18.015 156 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '155aa long hypothetical bacterioferritin comigratory protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GHMVEIGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKA FKEHNKLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSLS ; _entity_poly.pdbx_seq_one_letter_code_can ;GHMVEIGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKA FKEHNKLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSLS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier sto001001785.2 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MET n 1 4 VAL n 1 5 GLU n 1 6 ILE n 1 7 GLY n 1 8 GLU n 1 9 LEU n 1 10 ALA n 1 11 PRO n 1 12 ASP n 1 13 PHE n 1 14 GLU n 1 15 LEU n 1 16 PRO n 1 17 ASP n 1 18 THR n 1 19 GLU n 1 20 LEU n 1 21 LYS n 1 22 LYS n 1 23 VAL n 1 24 LYS n 1 25 LEU n 1 26 SER n 1 27 ALA n 1 28 LEU n 1 29 LYS n 1 30 GLY n 1 31 LYS n 1 32 VAL n 1 33 VAL n 1 34 VAL n 1 35 LEU n 1 36 ALA n 1 37 PHE n 1 38 TYR n 1 39 PRO n 1 40 ALA n 1 41 ALA n 1 42 PHE n 1 43 THR n 1 44 GLN n 1 45 VAL n 1 46 CYS n 1 47 THR n 1 48 LYS n 1 49 GLU n 1 50 MET n 1 51 CYS n 1 52 THR n 1 53 PHE n 1 54 ARG n 1 55 ASP n 1 56 SER n 1 57 MET n 1 58 ALA n 1 59 LYS n 1 60 PHE n 1 61 ASN n 1 62 GLN n 1 63 VAL n 1 64 ASN n 1 65 ALA n 1 66 VAL n 1 67 VAL n 1 68 LEU n 1 69 GLY n 1 70 ILE n 1 71 SER n 1 72 VAL n 1 73 ASP n 1 74 PRO n 1 75 PRO n 1 76 PHE n 1 77 SER n 1 78 ASN n 1 79 LYS n 1 80 ALA n 1 81 PHE n 1 82 LYS n 1 83 GLU n 1 84 HIS n 1 85 ASN n 1 86 LYS n 1 87 LEU n 1 88 ASN n 1 89 PHE n 1 90 THR n 1 91 ILE n 1 92 LEU n 1 93 SER n 1 94 ASP n 1 95 TYR n 1 96 ASN n 1 97 ARG n 1 98 GLU n 1 99 VAL n 1 100 VAL n 1 101 LYS n 1 102 LYS n 1 103 TYR n 1 104 ASN n 1 105 VAL n 1 106 ALA n 1 107 TRP n 1 108 GLU n 1 109 PHE n 1 110 PRO n 1 111 ALA n 1 112 LEU n 1 113 PRO n 1 114 GLY n 1 115 TYR n 1 116 VAL n 1 117 LEU n 1 118 ALA n 1 119 LYS n 1 120 ARG n 1 121 ALA n 1 122 VAL n 1 123 PHE n 1 124 VAL n 1 125 ILE n 1 126 ASP n 1 127 LYS n 1 128 GLU n 1 129 GLY n 1 130 LYS n 1 131 VAL n 1 132 ARG n 1 133 TYR n 1 134 LYS n 1 135 TRP n 1 136 VAL n 1 137 SER n 1 138 ASP n 1 139 ASP n 1 140 PRO n 1 141 THR n 1 142 LYS n 1 143 GLU n 1 144 PRO n 1 145 PRO n 1 146 TYR n 1 147 ASP n 1 148 GLU n 1 149 ILE n 1 150 GLU n 1 151 LYS n 1 152 VAL n 1 153 VAL n 1 154 LYS n 1 155 SER n 1 156 LEU n 1 157 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Sulfolobus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain strain7 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sulfolobus tokodaii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 111955 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21-CodonPlus(DE3)-RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Pladmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q96ZP9_SULTO _struct_ref.pdbx_db_accession Q96ZP9 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MVEIGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFK EHNKLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSLS ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2YWN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 157 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q96ZP9 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 155 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 155 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2YWN GLY A 1 ? UNP Q96ZP9 ? ? 'EXPRESSION TAG' -2 1 1 2YWN HIS A 2 ? UNP Q96ZP9 ? ? 'EXPRESSION TAG' -1 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2YWN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.37 _exptl_crystal.density_percent_sol 48.11 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '0.2M Ammonium acetate, 0.1M HEPES, 25% PEG 3350, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU JUPITER 210' _diffrn_detector.pdbx_collection_date 2006-11-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI Double-Crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL26B2' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL26B2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 2YWN _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.60 _reflns.number_obs 22697 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.047 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 40.4 _reflns.B_iso_Wilson_estimate 17.2 _reflns.pdbx_redundancy 6.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.66 _reflns_shell.percent_possible_all 98.4 _reflns_shell.Rmerge_I_obs 0.121 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 8.5 _reflns_shell.pdbx_redundancy 5.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2YWN _refine.ls_number_reflns_obs 22679 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1410950.87 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.0 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 99.6 _refine.ls_R_factor_obs 0.2 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2 _refine.ls_R_factor_R_free 0.221 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.9 _refine.ls_number_reflns_R_free 2253 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 16.9 _refine.aniso_B[1][1] 5.12 _refine.aniso_B[2][2] -1.59 _refine.aniso_B[3][3] -3.53 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.38085 _refine.solvent_model_param_bsol 35.9741 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 2CX3 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2YWN _refine_analyze.Luzzati_coordinate_error_obs 0.18 _refine_analyze.Luzzati_sigma_a_obs 0.05 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.20 _refine_analyze.Luzzati_sigma_a_free 0.11 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1204 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 156 _refine_hist.number_atoms_total 1360 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 50.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.0 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.77 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.12 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.70 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.90 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.82 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.60 _refine_ls_shell.d_res_low 1.70 _refine_ls_shell.number_reflns_R_work 3289 _refine_ls_shell.R_factor_R_work 0.21 _refine_ls_shell.percent_reflns_obs 99.0 _refine_ls_shell.R_factor_R_free 0.267 _refine_ls_shell.R_factor_R_free_error 0.013 _refine_ls_shell.percent_reflns_R_free 10.7 _refine_ls_shell.number_reflns_R_free 396 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water_rep.top 'X-RAY DIFFRACTION' # _struct.entry_id 2YWN _struct.title 'Crystal structure of peroxiredoxin-like protein from Sulfolobus tokodaii' _struct.pdbx_descriptor 'Peroxiredoxin-like protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YWN _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text ;Redox protein, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, OXIDOREDUCTASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 26 ? LYS A 29 ? SER A 24 LYS A 27 5 ? 4 HELX_P HELX_P2 2 ASP A 55 ? ASN A 61 ? ASP A 53 ASN A 59 5 ? 7 HELX_P HELX_P3 3 PRO A 74 ? ASN A 85 ? PRO A 72 ASN A 83 1 ? 12 HELX_P HELX_P4 4 ARG A 97 ? TYR A 103 ? ARG A 95 TYR A 101 1 ? 7 HELX_P HELX_P5 5 PRO A 145 ? LEU A 156 ? PRO A 143 LEU A 154 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 14 ? PRO A 16 ? GLU A 12 PRO A 14 A 2 LYS A 22 ? LYS A 24 ? LYS A 20 LYS A 22 B 1 THR A 90 ? SER A 93 ? THR A 88 SER A 91 B 2 VAL A 66 ? SER A 71 ? VAL A 64 SER A 69 B 3 VAL A 33 ? PHE A 37 ? VAL A 31 PHE A 35 B 4 ARG A 120 ? ILE A 125 ? ARG A 118 ILE A 123 B 5 VAL A 131 ? SER A 137 ? VAL A 129 SER A 135 C 1 ALA A 106 ? GLU A 108 ? ALA A 104 GLU A 106 C 2 VAL A 116 ? ALA A 118 ? VAL A 114 ALA A 116 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 15 ? N LEU A 13 O VAL A 23 ? O VAL A 21 B 1 2 O LEU A 92 ? O LEU A 90 N GLY A 69 ? N GLY A 67 B 2 3 O LEU A 68 ? O LEU A 66 N VAL A 34 ? N VAL A 32 B 3 4 N VAL A 33 ? N VAL A 31 O ILE A 125 ? O ILE A 123 B 4 5 N VAL A 124 ? N VAL A 122 O ARG A 132 ? O ARG A 130 C 1 2 N TRP A 107 ? N TRP A 105 O LEU A 117 ? O LEU A 115 # _database_PDB_matrix.entry_id 2YWN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YWN _atom_sites.fract_transf_matrix[1][1] 0.014422 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012711 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016136 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 -2 GLY GLY A . n A 1 2 HIS 2 -1 -1 HIS HIS A . n A 1 3 MET 3 1 1 MET MET A . n A 1 4 VAL 4 2 2 VAL VAL A . n A 1 5 GLU 5 3 3 GLU GLU A . n A 1 6 ILE 6 4 4 ILE ILE A . n A 1 7 GLY 7 5 5 GLY GLY A . n A 1 8 GLU 8 6 6 GLU GLU A . n A 1 9 LEU 9 7 7 LEU LEU A . n A 1 10 ALA 10 8 8 ALA ALA A . n A 1 11 PRO 11 9 9 PRO PRO A . n A 1 12 ASP 12 10 10 ASP ASP A . n A 1 13 PHE 13 11 11 PHE PHE A . n A 1 14 GLU 14 12 12 GLU GLU A . n A 1 15 LEU 15 13 13 LEU LEU A . n A 1 16 PRO 16 14 14 PRO PRO A . n A 1 17 ASP 17 15 15 ASP ASP A . n A 1 18 THR 18 16 16 THR THR A . n A 1 19 GLU 19 17 17 GLU GLU A . n A 1 20 LEU 20 18 18 LEU LEU A . n A 1 21 LYS 21 19 19 LYS LYS A . n A 1 22 LYS 22 20 20 LYS LYS A . n A 1 23 VAL 23 21 21 VAL VAL A . n A 1 24 LYS 24 22 22 LYS LYS A . n A 1 25 LEU 25 23 23 LEU LEU A . n A 1 26 SER 26 24 24 SER SER A . n A 1 27 ALA 27 25 25 ALA ALA A . n A 1 28 LEU 28 26 26 LEU LEU A . n A 1 29 LYS 29 27 27 LYS LYS A . n A 1 30 GLY 30 28 28 GLY GLY A . n A 1 31 LYS 31 29 29 LYS LYS A . n A 1 32 VAL 32 30 30 VAL VAL A . n A 1 33 VAL 33 31 31 VAL VAL A . n A 1 34 VAL 34 32 32 VAL VAL A . n A 1 35 LEU 35 33 33 LEU LEU A . n A 1 36 ALA 36 34 34 ALA ALA A . n A 1 37 PHE 37 35 35 PHE PHE A . n A 1 38 TYR 38 36 36 TYR TYR A . n A 1 39 PRO 39 37 37 PRO PRO A . n A 1 40 ALA 40 38 38 ALA ALA A . n A 1 41 ALA 41 39 39 ALA ALA A . n A 1 42 PHE 42 40 40 PHE PHE A . n A 1 43 THR 43 41 41 THR THR A . n A 1 44 GLN 44 42 42 GLN GLN A . n A 1 45 VAL 45 43 43 VAL VAL A . n A 1 46 CYS 46 44 ? ? ? A . n A 1 47 THR 47 45 ? ? ? A . n A 1 48 LYS 48 46 ? ? ? A . n A 1 49 GLU 49 47 ? ? ? A . n A 1 50 MET 50 48 ? ? ? A . n A 1 51 CYS 51 49 ? ? ? A . n A 1 52 THR 52 50 ? ? ? A . n A 1 53 PHE 53 51 51 PHE PHE A . n A 1 54 ARG 54 52 52 ARG ARG A . n A 1 55 ASP 55 53 53 ASP ASP A . n A 1 56 SER 56 54 54 SER SER A . n A 1 57 MET 57 55 55 MET MET A . n A 1 58 ALA 58 56 56 ALA ALA A . n A 1 59 LYS 59 57 57 LYS LYS A . n A 1 60 PHE 60 58 58 PHE PHE A . n A 1 61 ASN 61 59 59 ASN ASN A . n A 1 62 GLN 62 60 60 GLN GLN A . n A 1 63 VAL 63 61 61 VAL VAL A . n A 1 64 ASN 64 62 62 ASN ASN A . n A 1 65 ALA 65 63 63 ALA ALA A . n A 1 66 VAL 66 64 64 VAL VAL A . n A 1 67 VAL 67 65 65 VAL VAL A . n A 1 68 LEU 68 66 66 LEU LEU A . n A 1 69 GLY 69 67 67 GLY GLY A . n A 1 70 ILE 70 68 68 ILE ILE A . n A 1 71 SER 71 69 69 SER SER A . n A 1 72 VAL 72 70 70 VAL VAL A . n A 1 73 ASP 73 71 71 ASP ASP A . n A 1 74 PRO 74 72 72 PRO PRO A . n A 1 75 PRO 75 73 73 PRO PRO A . n A 1 76 PHE 76 74 74 PHE PHE A . n A 1 77 SER 77 75 75 SER SER A . n A 1 78 ASN 78 76 76 ASN ASN A . n A 1 79 LYS 79 77 77 LYS LYS A . n A 1 80 ALA 80 78 78 ALA ALA A . n A 1 81 PHE 81 79 79 PHE PHE A . n A 1 82 LYS 82 80 80 LYS LYS A . n A 1 83 GLU 83 81 81 GLU GLU A . n A 1 84 HIS 84 82 82 HIS HIS A . n A 1 85 ASN 85 83 83 ASN ASN A . n A 1 86 LYS 86 84 84 LYS LYS A . n A 1 87 LEU 87 85 85 LEU LEU A . n A 1 88 ASN 88 86 86 ASN ASN A . n A 1 89 PHE 89 87 87 PHE PHE A . n A 1 90 THR 90 88 88 THR THR A . n A 1 91 ILE 91 89 89 ILE ILE A . n A 1 92 LEU 92 90 90 LEU LEU A . n A 1 93 SER 93 91 91 SER SER A . n A 1 94 ASP 94 92 92 ASP ASP A . n A 1 95 TYR 95 93 93 TYR TYR A . n A 1 96 ASN 96 94 94 ASN ASN A . n A 1 97 ARG 97 95 95 ARG ARG A . n A 1 98 GLU 98 96 96 GLU GLU A . n A 1 99 VAL 99 97 97 VAL VAL A . n A 1 100 VAL 100 98 98 VAL VAL A . n A 1 101 LYS 101 99 99 LYS LYS A . n A 1 102 LYS 102 100 100 LYS LYS A . n A 1 103 TYR 103 101 101 TYR TYR A . n A 1 104 ASN 104 102 102 ASN ASN A . n A 1 105 VAL 105 103 103 VAL VAL A . n A 1 106 ALA 106 104 104 ALA ALA A . n A 1 107 TRP 107 105 105 TRP TRP A . n A 1 108 GLU 108 106 106 GLU GLU A . n A 1 109 PHE 109 107 107 PHE PHE A . n A 1 110 PRO 110 108 108 PRO PRO A . n A 1 111 ALA 111 109 109 ALA ALA A . n A 1 112 LEU 112 110 110 LEU LEU A . n A 1 113 PRO 113 111 111 PRO PRO A . n A 1 114 GLY 114 112 112 GLY GLY A . n A 1 115 TYR 115 113 113 TYR TYR A . n A 1 116 VAL 116 114 114 VAL VAL A . n A 1 117 LEU 117 115 115 LEU LEU A . n A 1 118 ALA 118 116 116 ALA ALA A . n A 1 119 LYS 119 117 117 LYS LYS A . n A 1 120 ARG 120 118 118 ARG ARG A . n A 1 121 ALA 121 119 119 ALA ALA A . n A 1 122 VAL 122 120 120 VAL VAL A . n A 1 123 PHE 123 121 121 PHE PHE A . n A 1 124 VAL 124 122 122 VAL VAL A . n A 1 125 ILE 125 123 123 ILE ILE A . n A 1 126 ASP 126 124 124 ASP ASP A . n A 1 127 LYS 127 125 125 LYS LYS A . n A 1 128 GLU 128 126 126 GLU GLU A . n A 1 129 GLY 129 127 127 GLY GLY A . n A 1 130 LYS 130 128 128 LYS LYS A . n A 1 131 VAL 131 129 129 VAL VAL A . n A 1 132 ARG 132 130 130 ARG ARG A . n A 1 133 TYR 133 131 131 TYR TYR A . n A 1 134 LYS 134 132 132 LYS LYS A . n A 1 135 TRP 135 133 133 TRP TRP A . n A 1 136 VAL 136 134 134 VAL VAL A . n A 1 137 SER 137 135 135 SER SER A . n A 1 138 ASP 138 136 136 ASP ASP A . n A 1 139 ASP 139 137 137 ASP ASP A . n A 1 140 PRO 140 138 138 PRO PRO A . n A 1 141 THR 141 139 139 THR THR A . n A 1 142 LYS 142 140 140 LYS LYS A . n A 1 143 GLU 143 141 141 GLU GLU A . n A 1 144 PRO 144 142 142 PRO PRO A . n A 1 145 PRO 145 143 143 PRO PRO A . n A 1 146 TYR 146 144 144 TYR TYR A . n A 1 147 ASP 147 145 145 ASP ASP A . n A 1 148 GLU 148 146 146 GLU GLU A . n A 1 149 ILE 149 147 147 ILE ILE A . n A 1 150 GLU 150 148 148 GLU GLU A . n A 1 151 LYS 151 149 149 LYS LYS A . n A 1 152 VAL 152 150 150 VAL VAL A . n A 1 153 VAL 153 151 151 VAL VAL A . n A 1 154 LYS 154 152 152 LYS LYS A . n A 1 155 SER 155 153 153 SER SER A . n A 1 156 LEU 156 154 154 LEU LEU A . n A 1 157 SER 157 155 155 SER SER A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 156 1 HOH HOH A . B 2 HOH 2 157 2 HOH HOH A . B 2 HOH 3 158 3 HOH HOH A . B 2 HOH 4 159 4 HOH HOH A . B 2 HOH 5 160 5 HOH HOH A . B 2 HOH 6 161 6 HOH HOH A . B 2 HOH 7 162 7 HOH HOH A . B 2 HOH 8 163 8 HOH HOH A . B 2 HOH 9 164 9 HOH HOH A . B 2 HOH 10 165 10 HOH HOH A . B 2 HOH 11 166 11 HOH HOH A . B 2 HOH 12 167 12 HOH HOH A . B 2 HOH 13 168 13 HOH HOH A . B 2 HOH 14 169 14 HOH HOH A . B 2 HOH 15 170 15 HOH HOH A . B 2 HOH 16 171 16 HOH HOH A . B 2 HOH 17 172 17 HOH HOH A . B 2 HOH 18 173 18 HOH HOH A . B 2 HOH 19 174 19 HOH HOH A . B 2 HOH 20 175 20 HOH HOH A . B 2 HOH 21 176 21 HOH HOH A . B 2 HOH 22 177 22 HOH HOH A . B 2 HOH 23 178 23 HOH HOH A . B 2 HOH 24 179 24 HOH HOH A . B 2 HOH 25 180 25 HOH HOH A . B 2 HOH 26 181 26 HOH HOH A . B 2 HOH 27 182 27 HOH HOH A . B 2 HOH 28 183 28 HOH HOH A . B 2 HOH 29 184 29 HOH HOH A . B 2 HOH 30 185 30 HOH HOH A . B 2 HOH 31 186 31 HOH HOH A . B 2 HOH 32 187 32 HOH HOH A . B 2 HOH 33 188 33 HOH HOH A . B 2 HOH 34 189 34 HOH HOH A . B 2 HOH 35 190 35 HOH HOH A . B 2 HOH 36 191 36 HOH HOH A . B 2 HOH 37 192 37 HOH HOH A . B 2 HOH 38 193 38 HOH HOH A . B 2 HOH 39 194 39 HOH HOH A . B 2 HOH 40 195 40 HOH HOH A . B 2 HOH 41 196 41 HOH HOH A . B 2 HOH 42 197 42 HOH HOH A . B 2 HOH 43 198 43 HOH HOH A . B 2 HOH 44 199 44 HOH HOH A . B 2 HOH 45 200 45 HOH HOH A . B 2 HOH 46 201 46 HOH HOH A . B 2 HOH 47 202 47 HOH HOH A . B 2 HOH 48 203 48 HOH HOH A . B 2 HOH 49 204 49 HOH HOH A . B 2 HOH 50 205 50 HOH HOH A . B 2 HOH 51 206 51 HOH HOH A . B 2 HOH 52 207 52 HOH HOH A . B 2 HOH 53 208 53 HOH HOH A . B 2 HOH 54 209 54 HOH HOH A . B 2 HOH 55 210 55 HOH HOH A . B 2 HOH 56 211 56 HOH HOH A . B 2 HOH 57 212 57 HOH HOH A . B 2 HOH 58 213 58 HOH HOH A . B 2 HOH 59 214 59 HOH HOH A . B 2 HOH 60 215 60 HOH HOH A . B 2 HOH 61 216 61 HOH HOH A . B 2 HOH 62 217 62 HOH HOH A . B 2 HOH 63 218 63 HOH HOH A . B 2 HOH 64 219 64 HOH HOH A . B 2 HOH 65 220 65 HOH HOH A . B 2 HOH 66 221 66 HOH HOH A . B 2 HOH 67 222 67 HOH HOH A . B 2 HOH 68 223 68 HOH HOH A . B 2 HOH 69 224 69 HOH HOH A . B 2 HOH 70 225 70 HOH HOH A . B 2 HOH 71 226 71 HOH HOH A . B 2 HOH 72 227 72 HOH HOH A . B 2 HOH 73 228 73 HOH HOH A . B 2 HOH 74 229 74 HOH HOH A . B 2 HOH 75 230 75 HOH HOH A . B 2 HOH 76 231 76 HOH HOH A . B 2 HOH 77 232 77 HOH HOH A . B 2 HOH 78 233 78 HOH HOH A . B 2 HOH 79 234 79 HOH HOH A . B 2 HOH 80 235 80 HOH HOH A . B 2 HOH 81 236 81 HOH HOH A . B 2 HOH 82 237 82 HOH HOH A . B 2 HOH 83 238 83 HOH HOH A . B 2 HOH 84 239 84 HOH HOH A . B 2 HOH 85 240 85 HOH HOH A . B 2 HOH 86 241 86 HOH HOH A . B 2 HOH 87 242 87 HOH HOH A . B 2 HOH 88 243 88 HOH HOH A . B 2 HOH 89 244 89 HOH HOH A . B 2 HOH 90 245 90 HOH HOH A . B 2 HOH 91 246 91 HOH HOH A . B 2 HOH 92 247 92 HOH HOH A . B 2 HOH 93 248 93 HOH HOH A . B 2 HOH 94 249 94 HOH HOH A . B 2 HOH 95 250 95 HOH HOH A . B 2 HOH 96 251 96 HOH HOH A . B 2 HOH 97 252 97 HOH HOH A . B 2 HOH 98 253 98 HOH HOH A . B 2 HOH 99 254 99 HOH HOH A . B 2 HOH 100 255 100 HOH HOH A . B 2 HOH 101 256 101 HOH HOH A . B 2 HOH 102 257 102 HOH HOH A . B 2 HOH 103 258 103 HOH HOH A . B 2 HOH 104 259 104 HOH HOH A . B 2 HOH 105 260 105 HOH HOH A . B 2 HOH 106 261 106 HOH HOH A . B 2 HOH 107 262 107 HOH HOH A . B 2 HOH 108 263 108 HOH HOH A . B 2 HOH 109 264 109 HOH HOH A . B 2 HOH 110 265 110 HOH HOH A . B 2 HOH 111 266 111 HOH HOH A . B 2 HOH 112 267 112 HOH HOH A . B 2 HOH 113 268 113 HOH HOH A . B 2 HOH 114 269 114 HOH HOH A . B 2 HOH 115 270 115 HOH HOH A . B 2 HOH 116 271 116 HOH HOH A . B 2 HOH 117 272 117 HOH HOH A . B 2 HOH 118 273 118 HOH HOH A . B 2 HOH 119 274 119 HOH HOH A . B 2 HOH 120 275 120 HOH HOH A . B 2 HOH 121 276 121 HOH HOH A . B 2 HOH 122 277 122 HOH HOH A . B 2 HOH 123 278 123 HOH HOH A . B 2 HOH 124 279 124 HOH HOH A . B 2 HOH 125 280 125 HOH HOH A . B 2 HOH 126 281 126 HOH HOH A . B 2 HOH 127 282 127 HOH HOH A . B 2 HOH 128 283 128 HOH HOH A . B 2 HOH 129 284 129 HOH HOH A . B 2 HOH 130 285 130 HOH HOH A . B 2 HOH 131 286 131 HOH HOH A . B 2 HOH 132 287 132 HOH HOH A . B 2 HOH 133 288 133 HOH HOH A . B 2 HOH 134 289 134 HOH HOH A . B 2 HOH 135 290 135 HOH HOH A . B 2 HOH 136 291 136 HOH HOH A . B 2 HOH 137 292 137 HOH HOH A . B 2 HOH 138 293 138 HOH HOH A . B 2 HOH 139 294 139 HOH HOH A . B 2 HOH 140 295 140 HOH HOH A . B 2 HOH 141 296 141 HOH HOH A . B 2 HOH 142 297 142 HOH HOH A . B 2 HOH 143 298 143 HOH HOH A . B 2 HOH 144 299 144 HOH HOH A . B 2 HOH 145 300 145 HOH HOH A . B 2 HOH 146 301 146 HOH HOH A . B 2 HOH 147 302 147 HOH HOH A . B 2 HOH 148 303 148 HOH HOH A . B 2 HOH 149 304 149 HOH HOH A . B 2 HOH 150 305 150 HOH HOH A . B 2 HOH 151 306 151 HOH HOH A . B 2 HOH 152 307 152 HOH HOH A . B 2 HOH 153 308 153 HOH HOH A . B 2 HOH 154 309 154 HOH HOH A . B 2 HOH 155 310 155 HOH HOH A . B 2 HOH 156 311 156 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 92 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -91.05 _pdbx_validate_torsion.psi 58.42 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A CYS 44 ? A CYS 46 2 1 Y 1 A THR 45 ? A THR 47 3 1 Y 1 A LYS 46 ? A LYS 48 4 1 Y 1 A GLU 47 ? A GLU 49 5 1 Y 1 A MET 48 ? A MET 50 6 1 Y 1 A CYS 49 ? A CYS 51 7 1 Y 1 A THR 50 ? A THR 52 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #