data_2YX6 # _entry.id 2YX6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2YX6 pdb_00002yx6 10.2210/pdb2yx6/pdb RCSB RCSB027246 ? ? WWPDB D_1000027246 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id pho001000822.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2YX6 _pdbx_database_status.recvd_initial_deposition_date 2007-04-24 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hosaka, T.' 1 'Murayama, K.' 2 'Terada, T.' 3 'Shirouzu, M.' 4 'Yokoyama, S.' 5 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 6 # _citation.id primary _citation.title 'Crystal structure of PH0822' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hosaka, T.' 1 ? primary 'Murayama, K.' 2 ? primary 'Terada, T.' 3 ? primary 'Shirouzu, M.' 4 ? primary 'Yokoyama, S.' 5 ? # _cell.entry_id 2YX6 _cell.length_a 94.932 _cell.length_b 99.877 _cell.length_c 48.812 _cell.angle_alpha 90.00 _cell.angle_beta 112.33 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2YX6 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical protein PH0822' 13689.595 4 ? ? ? ? 2 non-polymer syn "ADENOSINE-5'-DIPHOSPHATE" 427.201 1 ? ? ? ? 3 water nat water 18.015 107 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MRVAIPAEDDRGIKSNVSKHFGRSRYFVFVDIEGEDVKNVEVVEVPFEEHGPGDLPNFIKDHGAKIVLTYGIGRRAIEYF NSLGISVVTGVYGRISDVIKAFIGGKLKIDYDWKEKIEKEH ; _entity_poly.pdbx_seq_one_letter_code_can ;MRVAIPAEDDRGIKSNVSKHFGRSRYFVFVDIEGEDVKNVEVVEVPFEEHGPGDLPNFIKDHGAKIVLTYGIGRRAIEYF NSLGISVVTGVYGRISDVIKAFIGGKLKIDYDWKEKIEKEH ; _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier pho001000822.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 VAL n 1 4 ALA n 1 5 ILE n 1 6 PRO n 1 7 ALA n 1 8 GLU n 1 9 ASP n 1 10 ASP n 1 11 ARG n 1 12 GLY n 1 13 ILE n 1 14 LYS n 1 15 SER n 1 16 ASN n 1 17 VAL n 1 18 SER n 1 19 LYS n 1 20 HIS n 1 21 PHE n 1 22 GLY n 1 23 ARG n 1 24 SER n 1 25 ARG n 1 26 TYR n 1 27 PHE n 1 28 VAL n 1 29 PHE n 1 30 VAL n 1 31 ASP n 1 32 ILE n 1 33 GLU n 1 34 GLY n 1 35 GLU n 1 36 ASP n 1 37 VAL n 1 38 LYS n 1 39 ASN n 1 40 VAL n 1 41 GLU n 1 42 VAL n 1 43 VAL n 1 44 GLU n 1 45 VAL n 1 46 PRO n 1 47 PHE n 1 48 GLU n 1 49 GLU n 1 50 HIS n 1 51 GLY n 1 52 PRO n 1 53 GLY n 1 54 ASP n 1 55 LEU n 1 56 PRO n 1 57 ASN n 1 58 PHE n 1 59 ILE n 1 60 LYS n 1 61 ASP n 1 62 HIS n 1 63 GLY n 1 64 ALA n 1 65 LYS n 1 66 ILE n 1 67 VAL n 1 68 LEU n 1 69 THR n 1 70 TYR n 1 71 GLY n 1 72 ILE n 1 73 GLY n 1 74 ARG n 1 75 ARG n 1 76 ALA n 1 77 ILE n 1 78 GLU n 1 79 TYR n 1 80 PHE n 1 81 ASN n 1 82 SER n 1 83 LEU n 1 84 GLY n 1 85 ILE n 1 86 SER n 1 87 VAL n 1 88 VAL n 1 89 THR n 1 90 GLY n 1 91 VAL n 1 92 TYR n 1 93 GLY n 1 94 ARG n 1 95 ILE n 1 96 SER n 1 97 ASP n 1 98 VAL n 1 99 ILE n 1 100 LYS n 1 101 ALA n 1 102 PHE n 1 103 ILE n 1 104 GLY n 1 105 GLY n 1 106 LYS n 1 107 LEU n 1 108 LYS n 1 109 ILE n 1 110 ASP n 1 111 TYR n 1 112 ASP n 1 113 TRP n 1 114 LYS n 1 115 GLU n 1 116 LYS n 1 117 ILE n 1 118 GLU n 1 119 LYS n 1 120 GLU n 1 121 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Pyrococcus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species 'Pyrococcus horikoshii' _entity_src_gen.gene_src_strain OT3 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pyrococcus horikoshii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 70601 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O58552_PYRHO _struct_ref.pdbx_db_accession O58552 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRVAIPAEDDRGIKSNVSKHFGRSRYFVFVDIEGEDVKNVEVVEVPFEEHGPGDLPNFIKDHGAKIVLTYGIGRRAIEYF NSLGISVVTGVYGRISDVIKAFIGGKLKIDYDWKEKIEKEH ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2YX6 A 1 ? 121 ? O58552 1 ? 121 ? 1 121 2 1 2YX6 B 1 ? 121 ? O58552 1 ? 121 ? 1 121 3 1 2YX6 C 1 ? 121 ? O58552 1 ? 121 ? 1 121 4 1 2YX6 D 1 ? 121 ? O58552 1 ? 121 ? 1 121 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADP non-polymer n "ADENOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2YX6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.95 _exptl_crystal.density_percent_sol 37.05 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '20% PEG8000, 0.01M imidazole, 0.01M adenosine-5-triphosphate disodium salt, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU JUPITER 210' _diffrn_detector.pdbx_collection_date 2006-10-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Si _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL26B1' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL26B1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 2YX6 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3.0 _reflns.d_resolution_high 2.0 _reflns.d_resolution_low 20.0 _reflns.number_all ? _reflns.number_obs 21963 _reflns.percent_possible_obs 77.4 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_Rsym_value 0.06 _reflns.pdbx_netI_over_sigmaI 15.8657 _reflns.B_iso_Wilson_estimate 12.2 _reflns.pdbx_redundancy 2.75782 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.09 _reflns_shell.percent_possible_all 40.6 _reflns_shell.Rmerge_I_obs 0.123 _reflns_shell.pdbx_Rsym_value 0.144 _reflns_shell.meanI_over_sigI_obs 4.51497 _reflns_shell.pdbx_redundancy 1.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1444 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2YX6 _refine.ls_number_reflns_obs 20849 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 2182298.80 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 77.28 _refine.ls_R_factor_obs 0.21666 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21419 _refine.ls_R_factor_R_free 0.26242 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 1084 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.929 _refine.correlation_coeff_Fo_to_Fc_free 0.894 _refine.B_iso_mean 29.102 _refine.aniso_B[1][1] -0.01 _refine.aniso_B[2][2] 0.53 _refine.aniso_B[3][3] -0.43 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.12 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 1O13 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.365 _refine.pdbx_overall_ESU_R_Free 0.244 _refine.overall_SU_ML 0.157 _refine.overall_SU_B 5.514 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2YX6 _refine_analyze.Luzzati_coordinate_error_obs 0.25 _refine_analyze.Luzzati_sigma_a_obs 0.12 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.29 _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3529 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 27 _refine_hist.number_atoms_solvent 107 _refine_hist.number_atoms_total 3663 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.021 0.022 ? 3628 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.871 1.962 ? 4883 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.583 5.000 ? 435 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 31.245 23.195 ? 169 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.313 15.000 ? 632 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.185 15.000 ? 27 'X-RAY DIFFRACTION' ? r_chiral_restr 0.137 0.200 ? 530 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.020 ? 2716 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.252 0.200 ? 1601 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.331 0.200 ? 2462 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.164 0.200 ? 148 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.247 0.200 ? 81 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.190 0.200 ? 16 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.385 1.500 ? 2226 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.172 2.000 ? 3514 'X-RAY DIFFRACTION' ? r_scbond_it 3.263 3.000 ? 1598 'X-RAY DIFFRACTION' ? r_scangle_it 4.929 4.500 ? 1369 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.001 _refine_ls_shell.d_res_low 2.053 _refine_ls_shell.number_reflns_R_work 676 _refine_ls_shell.R_factor_R_work 0.212 _refine_ls_shell.percent_reflns_obs 34.24 _refine_ls_shell.R_factor_R_free 0.292 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 39 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2YX6 _struct.title 'Crystal structure of PH0822' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2YX6 _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;STRUCTURAL GENOMICS, UNKNOWN FUNCTION, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 11 ? SER A 15 ? ARG A 11 SER A 15 5 ? 5 HELX_P HELX_P2 2 GLY A 53 ? HIS A 62 ? GLY A 53 HIS A 62 1 ? 10 HELX_P HELX_P3 3 GLY A 73 ? LEU A 83 ? GLY A 73 LEU A 83 1 ? 11 HELX_P HELX_P4 4 ARG A 94 ? GLY A 104 ? ARG A 94 GLY A 104 1 ? 11 HELX_P HELX_P5 5 ARG B 11 ? SER B 15 ? ARG B 11 SER B 15 5 ? 5 HELX_P HELX_P6 6 GLY B 53 ? HIS B 62 ? GLY B 53 HIS B 62 1 ? 10 HELX_P HELX_P7 7 GLY B 73 ? LEU B 83 ? GLY B 73 LEU B 83 1 ? 11 HELX_P HELX_P8 8 ARG B 94 ? GLY B 104 ? ARG B 94 GLY B 104 1 ? 11 HELX_P HELX_P9 9 GLY C 53 ? HIS C 62 ? GLY C 53 HIS C 62 1 ? 10 HELX_P HELX_P10 10 GLY C 73 ? LEU C 83 ? GLY C 73 LEU C 83 1 ? 11 HELX_P HELX_P11 11 ARG C 94 ? GLY C 104 ? ARG C 94 GLY C 104 1 ? 11 HELX_P HELX_P12 12 ARG D 11 ? SER D 15 ? ARG D 11 SER D 15 5 ? 5 HELX_P HELX_P13 13 GLY D 53 ? ASP D 61 ? GLY D 53 ASP D 61 1 ? 9 HELX_P HELX_P14 14 GLY D 73 ? LEU D 83 ? GLY D 73 LEU D 83 1 ? 11 HELX_P HELX_P15 15 ARG D 94 ? GLY D 104 ? ARG D 94 GLY D 104 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 10 ? C ? 5 ? D ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel B 8 9 ? parallel B 9 10 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? parallel D 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 86 ? VAL A 88 ? SER A 86 VAL A 88 A 2 ILE A 66 ? LEU A 68 ? ILE A 66 LEU A 68 A 3 ARG A 2 ? ALA A 7 ? ARG A 2 ALA A 7 A 4 TYR A 26 ? GLU A 33 ? TYR A 26 GLU A 33 A 5 ASP A 36 ? GLU A 44 ? ASP A 36 GLU A 44 A 6 GLU B 41 ? GLU B 44 ? GLU B 41 GLU B 44 A 7 TYR B 26 ? GLU B 33 ? TYR B 26 GLU B 33 A 8 ASP B 36 ? VAL B 37 ? ASP B 36 VAL B 37 B 1 SER A 86 ? VAL A 88 ? SER A 86 VAL A 88 B 2 ILE A 66 ? LEU A 68 ? ILE A 66 LEU A 68 B 3 ARG A 2 ? ALA A 7 ? ARG A 2 ALA A 7 B 4 TYR A 26 ? GLU A 33 ? TYR A 26 GLU A 33 B 5 ASP A 36 ? GLU A 44 ? ASP A 36 GLU A 44 B 6 GLU B 41 ? GLU B 44 ? GLU B 41 GLU B 44 B 7 TYR B 26 ? GLU B 33 ? TYR B 26 GLU B 33 B 8 ARG B 2 ? ALA B 7 ? ARG B 2 ALA B 7 B 9 ILE B 66 ? LEU B 68 ? ILE B 66 LEU B 68 B 10 SER B 86 ? VAL B 88 ? SER B 86 VAL B 88 C 1 ASP C 36 ? GLU C 44 ? ASP C 36 GLU C 44 C 2 TYR C 26 ? GLU C 33 ? TYR C 26 GLU C 33 C 3 ARG C 2 ? ALA C 7 ? ARG C 2 ALA C 7 C 4 ILE C 66 ? LEU C 68 ? ILE C 66 LEU C 68 C 5 SER C 86 ? VAL C 88 ? SER C 86 VAL C 88 D 1 ASP D 36 ? GLU D 44 ? ASP D 36 GLU D 44 D 2 TYR D 26 ? GLU D 33 ? TYR D 26 GLU D 33 D 3 ARG D 2 ? ALA D 7 ? ARG D 2 ALA D 7 D 4 ILE D 66 ? LEU D 68 ? ILE D 66 LEU D 68 D 5 SER D 86 ? VAL D 88 ? SER D 86 VAL D 88 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 88 ? O VAL A 88 N VAL A 67 ? N VAL A 67 A 2 3 O ILE A 66 ? O ILE A 66 N ALA A 4 ? N ALA A 4 A 3 4 N VAL A 3 ? N VAL A 3 O VAL A 30 ? O VAL A 30 A 4 5 N GLU A 33 ? N GLU A 33 O ASP A 36 ? O ASP A 36 A 5 6 N VAL A 42 ? N VAL A 42 O VAL B 42 ? O VAL B 42 A 6 7 O GLU B 41 ? O GLU B 41 N PHE B 29 ? N PHE B 29 A 7 8 N GLU B 33 ? N GLU B 33 O ASP B 36 ? O ASP B 36 B 1 2 O VAL A 88 ? O VAL A 88 N VAL A 67 ? N VAL A 67 B 2 3 O ILE A 66 ? O ILE A 66 N ALA A 4 ? N ALA A 4 B 3 4 N VAL A 3 ? N VAL A 3 O VAL A 30 ? O VAL A 30 B 4 5 N GLU A 33 ? N GLU A 33 O ASP A 36 ? O ASP A 36 B 5 6 N VAL A 42 ? N VAL A 42 O VAL B 42 ? O VAL B 42 B 6 7 O GLU B 41 ? O GLU B 41 N PHE B 29 ? N PHE B 29 B 7 8 O TYR B 26 ? O TYR B 26 N ALA B 7 ? N ALA B 7 B 8 9 N ALA B 4 ? N ALA B 4 O ILE B 66 ? O ILE B 66 B 9 10 N VAL B 67 ? N VAL B 67 O VAL B 88 ? O VAL B 88 C 1 2 O GLU C 41 ? O GLU C 41 N PHE C 29 ? N PHE C 29 C 2 3 O TYR C 26 ? O TYR C 26 N ALA C 7 ? N ALA C 7 C 3 4 N ALA C 4 ? N ALA C 4 O ILE C 66 ? O ILE C 66 C 4 5 N VAL C 67 ? N VAL C 67 O VAL C 88 ? O VAL C 88 D 1 2 O GLU D 41 ? O GLU D 41 N PHE D 29 ? N PHE D 29 D 2 3 O VAL D 30 ? O VAL D 30 N VAL D 3 ? N VAL D 3 D 3 4 N ALA D 4 ? N ALA D 4 O LEU D 68 ? O LEU D 68 D 4 5 N VAL D 67 ? N VAL D 67 O VAL D 88 ? O VAL D 88 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id C _struct_site.pdbx_auth_comp_id ADP _struct_site.pdbx_auth_seq_id 1001 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 13 _struct_site.details 'BINDING SITE FOR RESIDUE ADP C 1001' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 ARG B 74 ? ARG B 74 . ? 1_555 ? 2 AC1 13 ILE B 77 ? ILE B 77 . ? 1_555 ? 3 AC1 13 VAL B 87 ? VAL B 87 . ? 1_555 ? 4 AC1 13 THR B 89 ? THR B 89 . ? 1_555 ? 5 AC1 13 LYS B 114 ? LYS B 114 . ? 1_555 ? 6 AC1 13 HOH G . ? HOH B 129 . ? 1_555 ? 7 AC1 13 HOH G . ? HOH B 134 . ? 1_555 ? 8 AC1 13 ILE C 77 ? ILE C 77 . ? 1_555 ? 9 AC1 13 ASN C 81 ? ASN C 81 . ? 1_555 ? 10 AC1 13 VAL C 87 ? VAL C 87 . ? 1_555 ? 11 AC1 13 TRP C 113 ? TRP C 113 . ? 1_555 ? 12 AC1 13 LYS C 114 ? LYS C 114 . ? 1_555 ? 13 AC1 13 HOH H . ? HOH C 1008 . ? 1_555 ? # _database_PDB_matrix.entry_id 2YX6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2YX6 _atom_sites.fract_transf_matrix[1][1] 0.010534 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004327 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010012 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022148 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 PRO 6 6 6 PRO PRO A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 ARG 11 11 11 ARG ARG A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 ASN 16 16 16 ASN ASN A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 HIS 20 20 20 HIS HIS A . n A 1 21 PHE 21 21 21 PHE PHE A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 TYR 26 26 26 TYR TYR A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 PHE 47 47 47 PHE PHE A . n A 1 48 GLU 48 48 ? ? ? A . n A 1 49 GLU 49 49 ? ? ? A . n A 1 50 HIS 50 50 ? ? ? A . n A 1 51 GLY 51 51 ? ? ? A . n A 1 52 PRO 52 52 ? ? ? A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 PHE 58 58 58 PHE PHE A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 HIS 62 62 62 HIS HIS A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 TYR 70 70 70 TYR TYR A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 TYR 92 92 92 TYR TYR A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 VAL 98 98 98 VAL VAL A . n A 1 99 ILE 99 99 99 ILE ILE A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 PHE 102 102 102 PHE PHE A . n A 1 103 ILE 103 103 103 ILE ILE A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 LYS 108 108 108 LYS LYS A . n A 1 109 ILE 109 109 109 ILE ILE A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 TYR 111 111 111 TYR TYR A . n A 1 112 ASP 112 112 112 ASP ASP A . n A 1 113 TRP 113 113 113 TRP TRP A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 LYS 116 116 ? ? ? A . n A 1 117 ILE 117 117 ? ? ? A . n A 1 118 GLU 118 118 ? ? ? A . n A 1 119 LYS 119 119 ? ? ? A . n A 1 120 GLU 120 120 ? ? ? A . n A 1 121 HIS 121 121 ? ? ? A . n B 1 1 MET 1 1 1 MET MET B . n B 1 2 ARG 2 2 2 ARG ARG B . n B 1 3 VAL 3 3 3 VAL VAL B . n B 1 4 ALA 4 4 4 ALA ALA B . n B 1 5 ILE 5 5 5 ILE ILE B . n B 1 6 PRO 6 6 6 PRO PRO B . n B 1 7 ALA 7 7 7 ALA ALA B . n B 1 8 GLU 8 8 8 GLU GLU B . n B 1 9 ASP 9 9 9 ASP ASP B . n B 1 10 ASP 10 10 10 ASP ASP B . n B 1 11 ARG 11 11 11 ARG ARG B . n B 1 12 GLY 12 12 12 GLY GLY B . n B 1 13 ILE 13 13 13 ILE ILE B . n B 1 14 LYS 14 14 14 LYS LYS B . n B 1 15 SER 15 15 15 SER SER B . n B 1 16 ASN 16 16 16 ASN ASN B . n B 1 17 VAL 17 17 17 VAL VAL B . n B 1 18 SER 18 18 18 SER SER B . n B 1 19 LYS 19 19 19 LYS LYS B . n B 1 20 HIS 20 20 20 HIS HIS B . n B 1 21 PHE 21 21 21 PHE PHE B . n B 1 22 GLY 22 22 22 GLY GLY B . n B 1 23 ARG 23 23 23 ARG ARG B . n B 1 24 SER 24 24 24 SER SER B . n B 1 25 ARG 25 25 25 ARG ARG B . n B 1 26 TYR 26 26 26 TYR TYR B . n B 1 27 PHE 27 27 27 PHE PHE B . n B 1 28 VAL 28 28 28 VAL VAL B . n B 1 29 PHE 29 29 29 PHE PHE B . n B 1 30 VAL 30 30 30 VAL VAL B . n B 1 31 ASP 31 31 31 ASP ASP B . n B 1 32 ILE 32 32 32 ILE ILE B . n B 1 33 GLU 33 33 33 GLU GLU B . n B 1 34 GLY 34 34 34 GLY GLY B . n B 1 35 GLU 35 35 35 GLU GLU B . n B 1 36 ASP 36 36 36 ASP ASP B . n B 1 37 VAL 37 37 37 VAL VAL B . n B 1 38 LYS 38 38 38 LYS LYS B . n B 1 39 ASN 39 39 39 ASN ASN B . n B 1 40 VAL 40 40 40 VAL VAL B . n B 1 41 GLU 41 41 41 GLU GLU B . n B 1 42 VAL 42 42 42 VAL VAL B . n B 1 43 VAL 43 43 43 VAL VAL B . n B 1 44 GLU 44 44 44 GLU GLU B . n B 1 45 VAL 45 45 45 VAL VAL B . n B 1 46 PRO 46 46 46 PRO PRO B . n B 1 47 PHE 47 47 47 PHE PHE B . n B 1 48 GLU 48 48 ? ? ? B . n B 1 49 GLU 49 49 ? ? ? B . n B 1 50 HIS 50 50 ? ? ? B . n B 1 51 GLY 51 51 ? ? ? B . n B 1 52 PRO 52 52 ? ? ? B . n B 1 53 GLY 53 53 53 GLY GLY B . n B 1 54 ASP 54 54 54 ASP ASP B . n B 1 55 LEU 55 55 55 LEU LEU B . n B 1 56 PRO 56 56 56 PRO PRO B . n B 1 57 ASN 57 57 57 ASN ASN B . n B 1 58 PHE 58 58 58 PHE PHE B . n B 1 59 ILE 59 59 59 ILE ILE B . n B 1 60 LYS 60 60 60 LYS LYS B . n B 1 61 ASP 61 61 61 ASP ASP B . n B 1 62 HIS 62 62 62 HIS HIS B . n B 1 63 GLY 63 63 63 GLY GLY B . n B 1 64 ALA 64 64 64 ALA ALA B . n B 1 65 LYS 65 65 65 LYS LYS B . n B 1 66 ILE 66 66 66 ILE ILE B . n B 1 67 VAL 67 67 67 VAL VAL B . n B 1 68 LEU 68 68 68 LEU LEU B . n B 1 69 THR 69 69 69 THR THR B . n B 1 70 TYR 70 70 70 TYR TYR B . n B 1 71 GLY 71 71 71 GLY GLY B . n B 1 72 ILE 72 72 72 ILE ILE B . n B 1 73 GLY 73 73 73 GLY GLY B . n B 1 74 ARG 74 74 74 ARG ARG B . n B 1 75 ARG 75 75 75 ARG ARG B . n B 1 76 ALA 76 76 76 ALA ALA B . n B 1 77 ILE 77 77 77 ILE ILE B . n B 1 78 GLU 78 78 78 GLU GLU B . n B 1 79 TYR 79 79 79 TYR TYR B . n B 1 80 PHE 80 80 80 PHE PHE B . n B 1 81 ASN 81 81 81 ASN ASN B . n B 1 82 SER 82 82 82 SER SER B . n B 1 83 LEU 83 83 83 LEU LEU B . n B 1 84 GLY 84 84 84 GLY GLY B . n B 1 85 ILE 85 85 85 ILE ILE B . n B 1 86 SER 86 86 86 SER SER B . n B 1 87 VAL 87 87 87 VAL VAL B . n B 1 88 VAL 88 88 88 VAL VAL B . n B 1 89 THR 89 89 89 THR THR B . n B 1 90 GLY 90 90 90 GLY GLY B . n B 1 91 VAL 91 91 91 VAL VAL B . n B 1 92 TYR 92 92 92 TYR TYR B . n B 1 93 GLY 93 93 93 GLY GLY B . n B 1 94 ARG 94 94 94 ARG ARG B . n B 1 95 ILE 95 95 95 ILE ILE B . n B 1 96 SER 96 96 96 SER SER B . n B 1 97 ASP 97 97 97 ASP ASP B . n B 1 98 VAL 98 98 98 VAL VAL B . n B 1 99 ILE 99 99 99 ILE ILE B . n B 1 100 LYS 100 100 100 LYS LYS B . n B 1 101 ALA 101 101 101 ALA ALA B . n B 1 102 PHE 102 102 102 PHE PHE B . n B 1 103 ILE 103 103 103 ILE ILE B . n B 1 104 GLY 104 104 104 GLY GLY B . n B 1 105 GLY 105 105 105 GLY GLY B . n B 1 106 LYS 106 106 106 LYS LYS B . n B 1 107 LEU 107 107 107 LEU LEU B . n B 1 108 LYS 108 108 108 LYS LYS B . n B 1 109 ILE 109 109 109 ILE ILE B . n B 1 110 ASP 110 110 110 ASP ASP B . n B 1 111 TYR 111 111 111 TYR TYR B . n B 1 112 ASP 112 112 112 ASP ASP B . n B 1 113 TRP 113 113 113 TRP TRP B . n B 1 114 LYS 114 114 114 LYS LYS B . n B 1 115 GLU 115 115 115 GLU GLU B . n B 1 116 LYS 116 116 116 LYS LYS B . n B 1 117 ILE 117 117 ? ? ? B . n B 1 118 GLU 118 118 ? ? ? B . n B 1 119 LYS 119 119 ? ? ? B . n B 1 120 GLU 120 120 ? ? ? B . n B 1 121 HIS 121 121 ? ? ? B . n C 1 1 MET 1 1 1 MET MET C . n C 1 2 ARG 2 2 2 ARG ARG C . n C 1 3 VAL 3 3 3 VAL VAL C . n C 1 4 ALA 4 4 4 ALA ALA C . n C 1 5 ILE 5 5 5 ILE ILE C . n C 1 6 PRO 6 6 6 PRO PRO C . n C 1 7 ALA 7 7 7 ALA ALA C . n C 1 8 GLU 8 8 8 GLU GLU C . n C 1 9 ASP 9 9 9 ASP ASP C . n C 1 10 ASP 10 10 10 ASP ASP C . n C 1 11 ARG 11 11 ? ? ? C . n C 1 12 GLY 12 12 ? ? ? C . n C 1 13 ILE 13 13 13 ILE ILE C . n C 1 14 LYS 14 14 14 LYS LYS C . n C 1 15 SER 15 15 15 SER SER C . n C 1 16 ASN 16 16 16 ASN ASN C . n C 1 17 VAL 17 17 17 VAL VAL C . n C 1 18 SER 18 18 18 SER SER C . n C 1 19 LYS 19 19 19 LYS LYS C . n C 1 20 HIS 20 20 20 HIS HIS C . n C 1 21 PHE 21 21 21 PHE PHE C . n C 1 22 GLY 22 22 22 GLY GLY C . n C 1 23 ARG 23 23 23 ARG ARG C . n C 1 24 SER 24 24 24 SER SER C . n C 1 25 ARG 25 25 25 ARG ARG C . n C 1 26 TYR 26 26 26 TYR TYR C . n C 1 27 PHE 27 27 27 PHE PHE C . n C 1 28 VAL 28 28 28 VAL VAL C . n C 1 29 PHE 29 29 29 PHE PHE C . n C 1 30 VAL 30 30 30 VAL VAL C . n C 1 31 ASP 31 31 31 ASP ASP C . n C 1 32 ILE 32 32 32 ILE ILE C . n C 1 33 GLU 33 33 33 GLU GLU C . n C 1 34 GLY 34 34 34 GLY GLY C . n C 1 35 GLU 35 35 35 GLU GLU C . n C 1 36 ASP 36 36 36 ASP ASP C . n C 1 37 VAL 37 37 37 VAL VAL C . n C 1 38 LYS 38 38 38 LYS LYS C . n C 1 39 ASN 39 39 39 ASN ASN C . n C 1 40 VAL 40 40 40 VAL VAL C . n C 1 41 GLU 41 41 41 GLU GLU C . n C 1 42 VAL 42 42 42 VAL VAL C . n C 1 43 VAL 43 43 43 VAL VAL C . n C 1 44 GLU 44 44 44 GLU GLU C . n C 1 45 VAL 45 45 45 VAL VAL C . n C 1 46 PRO 46 46 46 PRO PRO C . n C 1 47 PHE 47 47 47 PHE PHE C . n C 1 48 GLU 48 48 48 GLU GLU C . n C 1 49 GLU 49 49 49 GLU GLU C . n C 1 50 HIS 50 50 50 HIS HIS C . n C 1 51 GLY 51 51 ? ? ? C . n C 1 52 PRO 52 52 ? ? ? C . n C 1 53 GLY 53 53 53 GLY GLY C . n C 1 54 ASP 54 54 54 ASP ASP C . n C 1 55 LEU 55 55 55 LEU LEU C . n C 1 56 PRO 56 56 56 PRO PRO C . n C 1 57 ASN 57 57 57 ASN ASN C . n C 1 58 PHE 58 58 58 PHE PHE C . n C 1 59 ILE 59 59 59 ILE ILE C . n C 1 60 LYS 60 60 60 LYS LYS C . n C 1 61 ASP 61 61 61 ASP ASP C . n C 1 62 HIS 62 62 62 HIS HIS C . n C 1 63 GLY 63 63 63 GLY GLY C . n C 1 64 ALA 64 64 64 ALA ALA C . n C 1 65 LYS 65 65 65 LYS LYS C . n C 1 66 ILE 66 66 66 ILE ILE C . n C 1 67 VAL 67 67 67 VAL VAL C . n C 1 68 LEU 68 68 68 LEU LEU C . n C 1 69 THR 69 69 69 THR THR C . n C 1 70 TYR 70 70 70 TYR TYR C . n C 1 71 GLY 71 71 71 GLY GLY C . n C 1 72 ILE 72 72 72 ILE ILE C . n C 1 73 GLY 73 73 73 GLY GLY C . n C 1 74 ARG 74 74 74 ARG ARG C . n C 1 75 ARG 75 75 75 ARG ARG C . n C 1 76 ALA 76 76 76 ALA ALA C . n C 1 77 ILE 77 77 77 ILE ILE C . n C 1 78 GLU 78 78 78 GLU GLU C . n C 1 79 TYR 79 79 79 TYR TYR C . n C 1 80 PHE 80 80 80 PHE PHE C . n C 1 81 ASN 81 81 81 ASN ASN C . n C 1 82 SER 82 82 82 SER SER C . n C 1 83 LEU 83 83 83 LEU LEU C . n C 1 84 GLY 84 84 84 GLY GLY C . n C 1 85 ILE 85 85 85 ILE ILE C . n C 1 86 SER 86 86 86 SER SER C . n C 1 87 VAL 87 87 87 VAL VAL C . n C 1 88 VAL 88 88 88 VAL VAL C . n C 1 89 THR 89 89 89 THR THR C . n C 1 90 GLY 90 90 90 GLY GLY C . n C 1 91 VAL 91 91 91 VAL VAL C . n C 1 92 TYR 92 92 92 TYR TYR C . n C 1 93 GLY 93 93 93 GLY GLY C . n C 1 94 ARG 94 94 94 ARG ARG C . n C 1 95 ILE 95 95 95 ILE ILE C . n C 1 96 SER 96 96 96 SER SER C . n C 1 97 ASP 97 97 97 ASP ASP C . n C 1 98 VAL 98 98 98 VAL VAL C . n C 1 99 ILE 99 99 99 ILE ILE C . n C 1 100 LYS 100 100 100 LYS LYS C . n C 1 101 ALA 101 101 101 ALA ALA C . n C 1 102 PHE 102 102 102 PHE PHE C . n C 1 103 ILE 103 103 103 ILE ILE C . n C 1 104 GLY 104 104 104 GLY GLY C . n C 1 105 GLY 105 105 105 GLY GLY C . n C 1 106 LYS 106 106 106 LYS LYS C . n C 1 107 LEU 107 107 107 LEU LEU C . n C 1 108 LYS 108 108 108 LYS LYS C . n C 1 109 ILE 109 109 109 ILE ILE C . n C 1 110 ASP 110 110 110 ASP ASP C . n C 1 111 TYR 111 111 111 TYR TYR C . n C 1 112 ASP 112 112 112 ASP ASP C . n C 1 113 TRP 113 113 113 TRP TRP C . n C 1 114 LYS 114 114 114 LYS LYS C . n C 1 115 GLU 115 115 115 GLU GLU C . n C 1 116 LYS 116 116 116 LYS LYS C . n C 1 117 ILE 117 117 ? ? ? C . n C 1 118 GLU 118 118 ? ? ? C . n C 1 119 LYS 119 119 ? ? ? C . n C 1 120 GLU 120 120 ? ? ? C . n C 1 121 HIS 121 121 ? ? ? C . n D 1 1 MET 1 1 1 MET MET D . n D 1 2 ARG 2 2 2 ARG ARG D . n D 1 3 VAL 3 3 3 VAL VAL D . n D 1 4 ALA 4 4 4 ALA ALA D . n D 1 5 ILE 5 5 5 ILE ILE D . n D 1 6 PRO 6 6 6 PRO PRO D . n D 1 7 ALA 7 7 7 ALA ALA D . n D 1 8 GLU 8 8 8 GLU GLU D . n D 1 9 ASP 9 9 9 ASP ASP D . n D 1 10 ASP 10 10 10 ASP ASP D . n D 1 11 ARG 11 11 11 ARG ARG D . n D 1 12 GLY 12 12 12 GLY GLY D . n D 1 13 ILE 13 13 13 ILE ILE D . n D 1 14 LYS 14 14 14 LYS LYS D . n D 1 15 SER 15 15 15 SER SER D . n D 1 16 ASN 16 16 16 ASN ASN D . n D 1 17 VAL 17 17 17 VAL VAL D . n D 1 18 SER 18 18 18 SER SER D . n D 1 19 LYS 19 19 19 LYS LYS D . n D 1 20 HIS 20 20 20 HIS HIS D . n D 1 21 PHE 21 21 21 PHE PHE D . n D 1 22 GLY 22 22 22 GLY GLY D . n D 1 23 ARG 23 23 23 ARG ARG D . n D 1 24 SER 24 24 24 SER SER D . n D 1 25 ARG 25 25 25 ARG ARG D . n D 1 26 TYR 26 26 26 TYR TYR D . n D 1 27 PHE 27 27 27 PHE PHE D . n D 1 28 VAL 28 28 28 VAL VAL D . n D 1 29 PHE 29 29 29 PHE PHE D . n D 1 30 VAL 30 30 30 VAL VAL D . n D 1 31 ASP 31 31 31 ASP ASP D . n D 1 32 ILE 32 32 32 ILE ILE D . n D 1 33 GLU 33 33 33 GLU GLU D . n D 1 34 GLY 34 34 34 GLY GLY D . n D 1 35 GLU 35 35 35 GLU GLU D . n D 1 36 ASP 36 36 36 ASP ASP D . n D 1 37 VAL 37 37 37 VAL VAL D . n D 1 38 LYS 38 38 38 LYS LYS D . n D 1 39 ASN 39 39 39 ASN ASN D . n D 1 40 VAL 40 40 40 VAL VAL D . n D 1 41 GLU 41 41 41 GLU GLU D . n D 1 42 VAL 42 42 42 VAL VAL D . n D 1 43 VAL 43 43 43 VAL VAL D . n D 1 44 GLU 44 44 44 GLU GLU D . n D 1 45 VAL 45 45 45 VAL VAL D . n D 1 46 PRO 46 46 46 PRO PRO D . n D 1 47 PHE 47 47 47 PHE PHE D . n D 1 48 GLU 48 48 ? ? ? D . n D 1 49 GLU 49 49 ? ? ? D . n D 1 50 HIS 50 50 ? ? ? D . n D 1 51 GLY 51 51 51 GLY GLY D . n D 1 52 PRO 52 52 52 PRO PRO D . n D 1 53 GLY 53 53 53 GLY GLY D . n D 1 54 ASP 54 54 54 ASP ASP D . n D 1 55 LEU 55 55 55 LEU LEU D . n D 1 56 PRO 56 56 56 PRO PRO D . n D 1 57 ASN 57 57 57 ASN ASN D . n D 1 58 PHE 58 58 58 PHE PHE D . n D 1 59 ILE 59 59 59 ILE ILE D . n D 1 60 LYS 60 60 60 LYS LYS D . n D 1 61 ASP 61 61 61 ASP ASP D . n D 1 62 HIS 62 62 62 HIS HIS D . n D 1 63 GLY 63 63 63 GLY GLY D . n D 1 64 ALA 64 64 64 ALA ALA D . n D 1 65 LYS 65 65 65 LYS LYS D . n D 1 66 ILE 66 66 66 ILE ILE D . n D 1 67 VAL 67 67 67 VAL VAL D . n D 1 68 LEU 68 68 68 LEU LEU D . n D 1 69 THR 69 69 69 THR THR D . n D 1 70 TYR 70 70 70 TYR TYR D . n D 1 71 GLY 71 71 71 GLY GLY D . n D 1 72 ILE 72 72 72 ILE ILE D . n D 1 73 GLY 73 73 73 GLY GLY D . n D 1 74 ARG 74 74 74 ARG ARG D . n D 1 75 ARG 75 75 75 ARG ARG D . n D 1 76 ALA 76 76 76 ALA ALA D . n D 1 77 ILE 77 77 77 ILE ILE D . n D 1 78 GLU 78 78 78 GLU GLU D . n D 1 79 TYR 79 79 79 TYR TYR D . n D 1 80 PHE 80 80 80 PHE PHE D . n D 1 81 ASN 81 81 81 ASN ASN D . n D 1 82 SER 82 82 82 SER SER D . n D 1 83 LEU 83 83 83 LEU LEU D . n D 1 84 GLY 84 84 84 GLY GLY D . n D 1 85 ILE 85 85 85 ILE ILE D . n D 1 86 SER 86 86 86 SER SER D . n D 1 87 VAL 87 87 87 VAL VAL D . n D 1 88 VAL 88 88 88 VAL VAL D . n D 1 89 THR 89 89 89 THR THR D . n D 1 90 GLY 90 90 90 GLY GLY D . n D 1 91 VAL 91 91 91 VAL VAL D . n D 1 92 TYR 92 92 92 TYR TYR D . n D 1 93 GLY 93 93 93 GLY GLY D . n D 1 94 ARG 94 94 94 ARG ARG D . n D 1 95 ILE 95 95 95 ILE ILE D . n D 1 96 SER 96 96 96 SER SER D . n D 1 97 ASP 97 97 97 ASP ASP D . n D 1 98 VAL 98 98 98 VAL VAL D . n D 1 99 ILE 99 99 99 ILE ILE D . n D 1 100 LYS 100 100 100 LYS LYS D . n D 1 101 ALA 101 101 101 ALA ALA D . n D 1 102 PHE 102 102 102 PHE PHE D . n D 1 103 ILE 103 103 103 ILE ILE D . n D 1 104 GLY 104 104 104 GLY GLY D . n D 1 105 GLY 105 105 105 GLY GLY D . n D 1 106 LYS 106 106 106 LYS LYS D . n D 1 107 LEU 107 107 107 LEU LEU D . n D 1 108 LYS 108 108 108 LYS LYS D . n D 1 109 ILE 109 109 109 ILE ILE D . n D 1 110 ASP 110 110 110 ASP ASP D . n D 1 111 TYR 111 111 111 TYR TYR D . n D 1 112 ASP 112 112 112 ASP ASP D . n D 1 113 TRP 113 113 113 TRP TRP D . n D 1 114 LYS 114 114 114 LYS LYS D . n D 1 115 GLU 115 115 ? ? ? D . n D 1 116 LYS 116 116 ? ? ? D . n D 1 117 ILE 117 117 ? ? ? D . n D 1 118 GLU 118 118 ? ? ? D . n D 1 119 LYS 119 119 ? ? ? D . n D 1 120 GLU 120 120 ? ? ? D . n D 1 121 HIS 121 121 ? ? ? D . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ADP 1 1001 1001 ADP ADP C . F 3 HOH 1 122 1 HOH HOH A . F 3 HOH 2 123 2 HOH HOH A . F 3 HOH 3 124 3 HOH HOH A . F 3 HOH 4 125 4 HOH HOH A . F 3 HOH 5 126 5 HOH HOH A . F 3 HOH 6 127 6 HOH HOH A . F 3 HOH 7 128 7 HOH HOH A . F 3 HOH 8 129 8 HOH HOH A . F 3 HOH 9 130 9 HOH HOH A . F 3 HOH 10 131 10 HOH HOH A . F 3 HOH 11 132 11 HOH HOH A . F 3 HOH 12 133 36 HOH HOH A . F 3 HOH 13 134 37 HOH HOH A . F 3 HOH 14 135 38 HOH HOH A . F 3 HOH 15 136 39 HOH HOH A . F 3 HOH 16 137 40 HOH HOH A . F 3 HOH 17 138 41 HOH HOH A . F 3 HOH 18 139 42 HOH HOH A . F 3 HOH 19 140 43 HOH HOH A . F 3 HOH 20 141 44 HOH HOH A . F 3 HOH 21 142 45 HOH HOH A . F 3 HOH 22 143 46 HOH HOH A . F 3 HOH 23 144 47 HOH HOH A . F 3 HOH 24 145 48 HOH HOH A . F 3 HOH 25 146 49 HOH HOH A . F 3 HOH 26 147 58 HOH HOH A . F 3 HOH 27 148 72 HOH HOH A . F 3 HOH 28 149 74 HOH HOH A . F 3 HOH 29 150 75 HOH HOH A . F 3 HOH 30 151 82 HOH HOH A . F 3 HOH 31 152 83 HOH HOH A . F 3 HOH 32 153 84 HOH HOH A . F 3 HOH 33 154 86 HOH HOH A . F 3 HOH 34 155 102 HOH HOH A . F 3 HOH 35 156 103 HOH HOH A . F 3 HOH 36 157 104 HOH HOH A . F 3 HOH 37 158 105 HOH HOH A . F 3 HOH 38 159 106 HOH HOH A . G 3 HOH 1 122 12 HOH HOH B . G 3 HOH 2 123 13 HOH HOH B . G 3 HOH 3 124 14 HOH HOH B . G 3 HOH 4 125 15 HOH HOH B . G 3 HOH 5 126 16 HOH HOH B . G 3 HOH 6 127 17 HOH HOH B . G 3 HOH 7 128 18 HOH HOH B . G 3 HOH 8 129 19 HOH HOH B . G 3 HOH 9 130 20 HOH HOH B . G 3 HOH 10 131 22 HOH HOH B . G 3 HOH 11 132 23 HOH HOH B . G 3 HOH 12 133 24 HOH HOH B . G 3 HOH 13 134 26 HOH HOH B . G 3 HOH 14 135 50 HOH HOH B . G 3 HOH 15 136 51 HOH HOH B . G 3 HOH 16 137 52 HOH HOH B . G 3 HOH 17 138 53 HOH HOH B . G 3 HOH 18 139 54 HOH HOH B . G 3 HOH 19 140 55 HOH HOH B . G 3 HOH 20 141 56 HOH HOH B . G 3 HOH 21 142 59 HOH HOH B . G 3 HOH 22 143 60 HOH HOH B . G 3 HOH 23 144 73 HOH HOH B . G 3 HOH 24 145 76 HOH HOH B . G 3 HOH 25 146 77 HOH HOH B . G 3 HOH 26 147 85 HOH HOH B . G 3 HOH 27 148 87 HOH HOH B . G 3 HOH 28 149 88 HOH HOH B . G 3 HOH 29 150 89 HOH HOH B . G 3 HOH 30 151 90 HOH HOH B . G 3 HOH 31 152 91 HOH HOH B . G 3 HOH 32 153 92 HOH HOH B . G 3 HOH 33 154 93 HOH HOH B . G 3 HOH 34 155 94 HOH HOH B . G 3 HOH 35 156 107 HOH HOH B . H 3 HOH 1 1002 21 HOH HOH C . H 3 HOH 2 1003 25 HOH HOH C . H 3 HOH 3 1004 27 HOH HOH C . H 3 HOH 4 1005 28 HOH HOH C . H 3 HOH 5 1006 57 HOH HOH C . H 3 HOH 6 1007 61 HOH HOH C . H 3 HOH 7 1008 62 HOH HOH C . H 3 HOH 8 1009 63 HOH HOH C . H 3 HOH 9 1010 64 HOH HOH C . H 3 HOH 10 1011 78 HOH HOH C . H 3 HOH 11 1012 95 HOH HOH C . H 3 HOH 12 1013 99 HOH HOH C . H 3 HOH 13 1014 100 HOH HOH C . I 3 HOH 1 122 29 HOH HOH D . I 3 HOH 2 123 30 HOH HOH D . I 3 HOH 3 124 31 HOH HOH D . I 3 HOH 4 125 32 HOH HOH D . I 3 HOH 5 126 33 HOH HOH D . I 3 HOH 6 127 34 HOH HOH D . I 3 HOH 7 128 35 HOH HOH D . I 3 HOH 8 129 65 HOH HOH D . I 3 HOH 9 130 66 HOH HOH D . I 3 HOH 10 131 67 HOH HOH D . I 3 HOH 11 132 68 HOH HOH D . I 3 HOH 12 133 70 HOH HOH D . I 3 HOH 13 134 71 HOH HOH D . I 3 HOH 14 135 79 HOH HOH D . I 3 HOH 15 136 80 HOH HOH D . I 3 HOH 16 137 81 HOH HOH D . I 3 HOH 17 138 96 HOH HOH D . I 3 HOH 18 139 97 HOH HOH D . I 3 HOH 19 140 98 HOH HOH D . I 3 HOH 20 141 101 HOH HOH D . I 3 HOH 21 142 108 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 3 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,F 2 1 B,C,E,G,H 3 1,3 D,I # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 3 'crystal symmetry operation' 2_556 -x,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 -18.5456579395 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 45.1516324798 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-30 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 CNS phasing . ? 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 36 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 36 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 36 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.80 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 5.50 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 70 ? ? -83.33 -85.56 2 1 ASP B 10 ? ? -69.68 3.23 3 1 GLU B 35 ? ? -92.21 32.32 4 1 LYS B 38 ? ? -104.58 -66.42 5 1 ASN B 39 ? ? -107.44 76.03 6 1 PRO B 46 ? ? -68.27 45.67 7 1 TYR B 70 ? ? -90.50 -75.41 8 1 PRO C 46 ? ? -46.18 155.87 9 1 ASP C 54 ? ? -23.56 -58.94 10 1 TYR C 70 ? ? -90.87 -73.96 11 1 LYS C 106 ? ? -153.67 63.08 12 1 PRO D 46 ? ? -76.82 23.84 13 1 PRO D 52 ? ? -68.83 13.22 14 1 TYR D 70 ? ? -105.43 -77.61 15 1 LYS D 106 ? ? -49.52 76.65 16 1 ASP D 112 ? ? -106.63 57.72 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 48 ? A GLU 48 2 1 Y 1 A GLU 49 ? A GLU 49 3 1 Y 1 A HIS 50 ? A HIS 50 4 1 Y 1 A GLY 51 ? A GLY 51 5 1 Y 1 A PRO 52 ? A PRO 52 6 1 Y 1 A LYS 116 ? A LYS 116 7 1 Y 1 A ILE 117 ? A ILE 117 8 1 Y 1 A GLU 118 ? A GLU 118 9 1 Y 1 A LYS 119 ? A LYS 119 10 1 Y 1 A GLU 120 ? A GLU 120 11 1 Y 1 A HIS 121 ? A HIS 121 12 1 Y 1 B GLU 48 ? B GLU 48 13 1 Y 1 B GLU 49 ? B GLU 49 14 1 Y 1 B HIS 50 ? B HIS 50 15 1 Y 1 B GLY 51 ? B GLY 51 16 1 Y 1 B PRO 52 ? B PRO 52 17 1 Y 1 B ILE 117 ? B ILE 117 18 1 Y 1 B GLU 118 ? B GLU 118 19 1 Y 1 B LYS 119 ? B LYS 119 20 1 Y 1 B GLU 120 ? B GLU 120 21 1 Y 1 B HIS 121 ? B HIS 121 22 1 Y 1 C ARG 11 ? C ARG 11 23 1 Y 1 C GLY 12 ? C GLY 12 24 1 Y 1 C GLY 51 ? C GLY 51 25 1 Y 1 C PRO 52 ? C PRO 52 26 1 Y 1 C ILE 117 ? C ILE 117 27 1 Y 1 C GLU 118 ? C GLU 118 28 1 Y 1 C LYS 119 ? C LYS 119 29 1 Y 1 C GLU 120 ? C GLU 120 30 1 Y 1 C HIS 121 ? C HIS 121 31 1 Y 1 D GLU 48 ? D GLU 48 32 1 Y 1 D GLU 49 ? D GLU 49 33 1 Y 1 D HIS 50 ? D HIS 50 34 1 Y 1 D GLU 115 ? D GLU 115 35 1 Y 1 D LYS 116 ? D LYS 116 36 1 Y 1 D ILE 117 ? D ILE 117 37 1 Y 1 D GLU 118 ? D GLU 118 38 1 Y 1 D LYS 119 ? D LYS 119 39 1 Y 1 D GLU 120 ? D GLU 120 40 1 Y 1 D HIS 121 ? D HIS 121 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ADP PB P N N 1 ADP O1B O N N 2 ADP O2B O N N 3 ADP O3B O N N 4 ADP PA P N S 5 ADP O1A O N N 6 ADP O2A O N N 7 ADP O3A O N N 8 ADP "O5'" O N N 9 ADP "C5'" C N N 10 ADP "C4'" C N R 11 ADP "O4'" O N N 12 ADP "C3'" C N S 13 ADP "O3'" O N N 14 ADP "C2'" C N R 15 ADP "O2'" O N N 16 ADP "C1'" C N R 17 ADP N9 N Y N 18 ADP C8 C Y N 19 ADP N7 N Y N 20 ADP C5 C Y N 21 ADP C6 C Y N 22 ADP N6 N N N 23 ADP N1 N Y N 24 ADP C2 C Y N 25 ADP N3 N Y N 26 ADP C4 C Y N 27 ADP HOB2 H N N 28 ADP HOB3 H N N 29 ADP HOA2 H N N 30 ADP "H5'1" H N N 31 ADP "H5'2" H N N 32 ADP "H4'" H N N 33 ADP "H3'" H N N 34 ADP "HO3'" H N N 35 ADP "H2'" H N N 36 ADP "HO2'" H N N 37 ADP "H1'" H N N 38 ADP H8 H N N 39 ADP HN61 H N N 40 ADP HN62 H N N 41 ADP H2 H N N 42 ALA N N N N 43 ALA CA C N S 44 ALA C C N N 45 ALA O O N N 46 ALA CB C N N 47 ALA OXT O N N 48 ALA H H N N 49 ALA H2 H N N 50 ALA HA H N N 51 ALA HB1 H N N 52 ALA HB2 H N N 53 ALA HB3 H N N 54 ALA HXT H N N 55 ARG N N N N 56 ARG CA C N S 57 ARG C C N N 58 ARG O O N N 59 ARG CB C N N 60 ARG CG C N N 61 ARG CD C N N 62 ARG NE N N N 63 ARG CZ C N N 64 ARG NH1 N N N 65 ARG NH2 N N N 66 ARG OXT O N N 67 ARG H H N N 68 ARG H2 H N N 69 ARG HA H N N 70 ARG HB2 H N N 71 ARG HB3 H N N 72 ARG HG2 H N N 73 ARG HG3 H N N 74 ARG HD2 H N N 75 ARG HD3 H N N 76 ARG HE H N N 77 ARG HH11 H N N 78 ARG HH12 H N N 79 ARG HH21 H N N 80 ARG HH22 H N N 81 ARG HXT H N N 82 ASN N N N N 83 ASN CA C N S 84 ASN C C N N 85 ASN O O N N 86 ASN CB C N N 87 ASN CG C N N 88 ASN OD1 O N N 89 ASN ND2 N N N 90 ASN OXT O N N 91 ASN H H N N 92 ASN H2 H N N 93 ASN HA H N N 94 ASN HB2 H N N 95 ASN HB3 H N N 96 ASN HD21 H N N 97 ASN HD22 H N N 98 ASN HXT H N N 99 ASP N N N N 100 ASP CA C N S 101 ASP C C N N 102 ASP O O N N 103 ASP CB C N N 104 ASP CG C N N 105 ASP OD1 O N N 106 ASP OD2 O N N 107 ASP OXT O N N 108 ASP H H N N 109 ASP H2 H N N 110 ASP HA H N N 111 ASP HB2 H N N 112 ASP HB3 H N N 113 ASP HD2 H N N 114 ASP HXT H N N 115 GLU N N N N 116 GLU CA C N S 117 GLU C C N N 118 GLU O O N N 119 GLU CB C N N 120 GLU CG C N N 121 GLU CD C N N 122 GLU OE1 O N N 123 GLU OE2 O N N 124 GLU OXT O N N 125 GLU H H N N 126 GLU H2 H N N 127 GLU HA H N N 128 GLU HB2 H N N 129 GLU HB3 H N N 130 GLU HG2 H N N 131 GLU HG3 H N N 132 GLU HE2 H N N 133 GLU HXT H N N 134 GLY N N N N 135 GLY CA C N N 136 GLY C C N N 137 GLY O O N N 138 GLY OXT O N N 139 GLY H H N N 140 GLY H2 H N N 141 GLY HA2 H N N 142 GLY HA3 H N N 143 GLY HXT H N N 144 HIS N N N N 145 HIS CA C N S 146 HIS C C N N 147 HIS O O N N 148 HIS CB C N N 149 HIS CG C Y N 150 HIS ND1 N Y N 151 HIS CD2 C Y N 152 HIS CE1 C Y N 153 HIS NE2 N Y N 154 HIS OXT O N N 155 HIS H H N N 156 HIS H2 H N N 157 HIS HA H N N 158 HIS HB2 H N N 159 HIS HB3 H N N 160 HIS HD1 H N N 161 HIS HD2 H N N 162 HIS HE1 H N N 163 HIS HE2 H N N 164 HIS HXT H N N 165 HOH O O N N 166 HOH H1 H N N 167 HOH H2 H N N 168 ILE N N N N 169 ILE CA C N S 170 ILE C C N N 171 ILE O O N N 172 ILE CB C N S 173 ILE CG1 C N N 174 ILE CG2 C N N 175 ILE CD1 C N N 176 ILE OXT O N N 177 ILE H H N N 178 ILE H2 H N N 179 ILE HA H N N 180 ILE HB H N N 181 ILE HG12 H N N 182 ILE HG13 H N N 183 ILE HG21 H N N 184 ILE HG22 H N N 185 ILE HG23 H N N 186 ILE HD11 H N N 187 ILE HD12 H N N 188 ILE HD13 H N N 189 ILE HXT H N N 190 LEU N N N N 191 LEU CA C N S 192 LEU C C N N 193 LEU O O N N 194 LEU CB C N N 195 LEU CG C N N 196 LEU CD1 C N N 197 LEU CD2 C N N 198 LEU OXT O N N 199 LEU H H N N 200 LEU H2 H N N 201 LEU HA H N N 202 LEU HB2 H N N 203 LEU HB3 H N N 204 LEU HG H N N 205 LEU HD11 H N N 206 LEU HD12 H N N 207 LEU HD13 H N N 208 LEU HD21 H N N 209 LEU HD22 H N N 210 LEU HD23 H N N 211 LEU HXT H N N 212 LYS N N N N 213 LYS CA C N S 214 LYS C C N N 215 LYS O O N N 216 LYS CB C N N 217 LYS CG C N N 218 LYS CD C N N 219 LYS CE C N N 220 LYS NZ N N N 221 LYS OXT O N N 222 LYS H H N N 223 LYS H2 H N N 224 LYS HA H N N 225 LYS HB2 H N N 226 LYS HB3 H N N 227 LYS HG2 H N N 228 LYS HG3 H N N 229 LYS HD2 H N N 230 LYS HD3 H N N 231 LYS HE2 H N N 232 LYS HE3 H N N 233 LYS HZ1 H N N 234 LYS HZ2 H N N 235 LYS HZ3 H N N 236 LYS HXT H N N 237 MET N N N N 238 MET CA C N S 239 MET C C N N 240 MET O O N N 241 MET CB C N N 242 MET CG C N N 243 MET SD S N N 244 MET CE C N N 245 MET OXT O N N 246 MET H H N N 247 MET H2 H N N 248 MET HA H N N 249 MET HB2 H N N 250 MET HB3 H N N 251 MET HG2 H N N 252 MET HG3 H N N 253 MET HE1 H N N 254 MET HE2 H N N 255 MET HE3 H N N 256 MET HXT H N N 257 PHE N N N N 258 PHE CA C N S 259 PHE C C N N 260 PHE O O N N 261 PHE CB C N N 262 PHE CG C Y N 263 PHE CD1 C Y N 264 PHE CD2 C Y N 265 PHE CE1 C Y N 266 PHE CE2 C Y N 267 PHE CZ C Y N 268 PHE OXT O N N 269 PHE H H N N 270 PHE H2 H N N 271 PHE HA H N N 272 PHE HB2 H N N 273 PHE HB3 H N N 274 PHE HD1 H N N 275 PHE HD2 H N N 276 PHE HE1 H N N 277 PHE HE2 H N N 278 PHE HZ H N N 279 PHE HXT H N N 280 PRO N N N N 281 PRO CA C N S 282 PRO C C N N 283 PRO O O N N 284 PRO CB C N N 285 PRO CG C N N 286 PRO CD C N N 287 PRO OXT O N N 288 PRO H H N N 289 PRO HA H N N 290 PRO HB2 H N N 291 PRO HB3 H N N 292 PRO HG2 H N N 293 PRO HG3 H N N 294 PRO HD2 H N N 295 PRO HD3 H N N 296 PRO HXT H N N 297 SER N N N N 298 SER CA C N S 299 SER C C N N 300 SER O O N N 301 SER CB C N N 302 SER OG O N N 303 SER OXT O N N 304 SER H H N N 305 SER H2 H N N 306 SER HA H N N 307 SER HB2 H N N 308 SER HB3 H N N 309 SER HG H N N 310 SER HXT H N N 311 THR N N N N 312 THR CA C N S 313 THR C C N N 314 THR O O N N 315 THR CB C N R 316 THR OG1 O N N 317 THR CG2 C N N 318 THR OXT O N N 319 THR H H N N 320 THR H2 H N N 321 THR HA H N N 322 THR HB H N N 323 THR HG1 H N N 324 THR HG21 H N N 325 THR HG22 H N N 326 THR HG23 H N N 327 THR HXT H N N 328 TRP N N N N 329 TRP CA C N S 330 TRP C C N N 331 TRP O O N N 332 TRP CB C N N 333 TRP CG C Y N 334 TRP CD1 C Y N 335 TRP CD2 C Y N 336 TRP NE1 N Y N 337 TRP CE2 C Y N 338 TRP CE3 C Y N 339 TRP CZ2 C Y N 340 TRP CZ3 C Y N 341 TRP CH2 C Y N 342 TRP OXT O N N 343 TRP H H N N 344 TRP H2 H N N 345 TRP HA H N N 346 TRP HB2 H N N 347 TRP HB3 H N N 348 TRP HD1 H N N 349 TRP HE1 H N N 350 TRP HE3 H N N 351 TRP HZ2 H N N 352 TRP HZ3 H N N 353 TRP HH2 H N N 354 TRP HXT H N N 355 TYR N N N N 356 TYR CA C N S 357 TYR C C N N 358 TYR O O N N 359 TYR CB C N N 360 TYR CG C Y N 361 TYR CD1 C Y N 362 TYR CD2 C Y N 363 TYR CE1 C Y N 364 TYR CE2 C Y N 365 TYR CZ C Y N 366 TYR OH O N N 367 TYR OXT O N N 368 TYR H H N N 369 TYR H2 H N N 370 TYR HA H N N 371 TYR HB2 H N N 372 TYR HB3 H N N 373 TYR HD1 H N N 374 TYR HD2 H N N 375 TYR HE1 H N N 376 TYR HE2 H N N 377 TYR HH H N N 378 TYR HXT H N N 379 VAL N N N N 380 VAL CA C N S 381 VAL C C N N 382 VAL O O N N 383 VAL CB C N N 384 VAL CG1 C N N 385 VAL CG2 C N N 386 VAL OXT O N N 387 VAL H H N N 388 VAL H2 H N N 389 VAL HA H N N 390 VAL HB H N N 391 VAL HG11 H N N 392 VAL HG12 H N N 393 VAL HG13 H N N 394 VAL HG21 H N N 395 VAL HG22 H N N 396 VAL HG23 H N N 397 VAL HXT H N N 398 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ADP PB O1B doub N N 1 ADP PB O2B sing N N 2 ADP PB O3B sing N N 3 ADP PB O3A sing N N 4 ADP O2B HOB2 sing N N 5 ADP O3B HOB3 sing N N 6 ADP PA O1A doub N N 7 ADP PA O2A sing N N 8 ADP PA O3A sing N N 9 ADP PA "O5'" sing N N 10 ADP O2A HOA2 sing N N 11 ADP "O5'" "C5'" sing N N 12 ADP "C5'" "C4'" sing N N 13 ADP "C5'" "H5'1" sing N N 14 ADP "C5'" "H5'2" sing N N 15 ADP "C4'" "O4'" sing N N 16 ADP "C4'" "C3'" sing N N 17 ADP "C4'" "H4'" sing N N 18 ADP "O4'" "C1'" sing N N 19 ADP "C3'" "O3'" sing N N 20 ADP "C3'" "C2'" sing N N 21 ADP "C3'" "H3'" sing N N 22 ADP "O3'" "HO3'" sing N N 23 ADP "C2'" "O2'" sing N N 24 ADP "C2'" "C1'" sing N N 25 ADP "C2'" "H2'" sing N N 26 ADP "O2'" "HO2'" sing N N 27 ADP "C1'" N9 sing N N 28 ADP "C1'" "H1'" sing N N 29 ADP N9 C8 sing Y N 30 ADP N9 C4 sing Y N 31 ADP C8 N7 doub Y N 32 ADP C8 H8 sing N N 33 ADP N7 C5 sing Y N 34 ADP C5 C6 sing Y N 35 ADP C5 C4 doub Y N 36 ADP C6 N6 sing N N 37 ADP C6 N1 doub Y N 38 ADP N6 HN61 sing N N 39 ADP N6 HN62 sing N N 40 ADP N1 C2 sing Y N 41 ADP C2 N3 doub Y N 42 ADP C2 H2 sing N N 43 ADP N3 C4 sing Y N 44 ALA N CA sing N N 45 ALA N H sing N N 46 ALA N H2 sing N N 47 ALA CA C sing N N 48 ALA CA CB sing N N 49 ALA CA HA sing N N 50 ALA C O doub N N 51 ALA C OXT sing N N 52 ALA CB HB1 sing N N 53 ALA CB HB2 sing N N 54 ALA CB HB3 sing N N 55 ALA OXT HXT sing N N 56 ARG N CA sing N N 57 ARG N H sing N N 58 ARG N H2 sing N N 59 ARG CA C sing N N 60 ARG CA CB sing N N 61 ARG CA HA sing N N 62 ARG C O doub N N 63 ARG C OXT sing N N 64 ARG CB CG sing N N 65 ARG CB HB2 sing N N 66 ARG CB HB3 sing N N 67 ARG CG CD sing N N 68 ARG CG HG2 sing N N 69 ARG CG HG3 sing N N 70 ARG CD NE sing N N 71 ARG CD HD2 sing N N 72 ARG CD HD3 sing N N 73 ARG NE CZ sing N N 74 ARG NE HE sing N N 75 ARG CZ NH1 sing N N 76 ARG CZ NH2 doub N N 77 ARG NH1 HH11 sing N N 78 ARG NH1 HH12 sing N N 79 ARG NH2 HH21 sing N N 80 ARG NH2 HH22 sing N N 81 ARG OXT HXT sing N N 82 ASN N CA sing N N 83 ASN N H sing N N 84 ASN N H2 sing N N 85 ASN CA C sing N N 86 ASN CA CB sing N N 87 ASN CA HA sing N N 88 ASN C O doub N N 89 ASN C OXT sing N N 90 ASN CB CG sing N N 91 ASN CB HB2 sing N N 92 ASN CB HB3 sing N N 93 ASN CG OD1 doub N N 94 ASN CG ND2 sing N N 95 ASN ND2 HD21 sing N N 96 ASN ND2 HD22 sing N N 97 ASN OXT HXT sing N N 98 ASP N CA sing N N 99 ASP N H sing N N 100 ASP N H2 sing N N 101 ASP CA C sing N N 102 ASP CA CB sing N N 103 ASP CA HA sing N N 104 ASP C O doub N N 105 ASP C OXT sing N N 106 ASP CB CG sing N N 107 ASP CB HB2 sing N N 108 ASP CB HB3 sing N N 109 ASP CG OD1 doub N N 110 ASP CG OD2 sing N N 111 ASP OD2 HD2 sing N N 112 ASP OXT HXT sing N N 113 GLU N CA sing N N 114 GLU N H sing N N 115 GLU N H2 sing N N 116 GLU CA C sing N N 117 GLU CA CB sing N N 118 GLU CA HA sing N N 119 GLU C O doub N N 120 GLU C OXT sing N N 121 GLU CB CG sing N N 122 GLU CB HB2 sing N N 123 GLU CB HB3 sing N N 124 GLU CG CD sing N N 125 GLU CG HG2 sing N N 126 GLU CG HG3 sing N N 127 GLU CD OE1 doub N N 128 GLU CD OE2 sing N N 129 GLU OE2 HE2 sing N N 130 GLU OXT HXT sing N N 131 GLY N CA sing N N 132 GLY N H sing N N 133 GLY N H2 sing N N 134 GLY CA C sing N N 135 GLY CA HA2 sing N N 136 GLY CA HA3 sing N N 137 GLY C O doub N N 138 GLY C OXT sing N N 139 GLY OXT HXT sing N N 140 HIS N CA sing N N 141 HIS N H sing N N 142 HIS N H2 sing N N 143 HIS CA C sing N N 144 HIS CA CB sing N N 145 HIS CA HA sing N N 146 HIS C O doub N N 147 HIS C OXT sing N N 148 HIS CB CG sing N N 149 HIS CB HB2 sing N N 150 HIS CB HB3 sing N N 151 HIS CG ND1 sing Y N 152 HIS CG CD2 doub Y N 153 HIS ND1 CE1 doub Y N 154 HIS ND1 HD1 sing N N 155 HIS CD2 NE2 sing Y N 156 HIS CD2 HD2 sing N N 157 HIS CE1 NE2 sing Y N 158 HIS CE1 HE1 sing N N 159 HIS NE2 HE2 sing N N 160 HIS OXT HXT sing N N 161 HOH O H1 sing N N 162 HOH O H2 sing N N 163 ILE N CA sing N N 164 ILE N H sing N N 165 ILE N H2 sing N N 166 ILE CA C sing N N 167 ILE CA CB sing N N 168 ILE CA HA sing N N 169 ILE C O doub N N 170 ILE C OXT sing N N 171 ILE CB CG1 sing N N 172 ILE CB CG2 sing N N 173 ILE CB HB sing N N 174 ILE CG1 CD1 sing N N 175 ILE CG1 HG12 sing N N 176 ILE CG1 HG13 sing N N 177 ILE CG2 HG21 sing N N 178 ILE CG2 HG22 sing N N 179 ILE CG2 HG23 sing N N 180 ILE CD1 HD11 sing N N 181 ILE CD1 HD12 sing N N 182 ILE CD1 HD13 sing N N 183 ILE OXT HXT sing N N 184 LEU N CA sing N N 185 LEU N H sing N N 186 LEU N H2 sing N N 187 LEU CA C sing N N 188 LEU CA CB sing N N 189 LEU CA HA sing N N 190 LEU C O doub N N 191 LEU C OXT sing N N 192 LEU CB CG sing N N 193 LEU CB HB2 sing N N 194 LEU CB HB3 sing N N 195 LEU CG CD1 sing N N 196 LEU CG CD2 sing N N 197 LEU CG HG sing N N 198 LEU CD1 HD11 sing N N 199 LEU CD1 HD12 sing N N 200 LEU CD1 HD13 sing N N 201 LEU CD2 HD21 sing N N 202 LEU CD2 HD22 sing N N 203 LEU CD2 HD23 sing N N 204 LEU OXT HXT sing N N 205 LYS N CA sing N N 206 LYS N H sing N N 207 LYS N H2 sing N N 208 LYS CA C sing N N 209 LYS CA CB sing N N 210 LYS CA HA sing N N 211 LYS C O doub N N 212 LYS C OXT sing N N 213 LYS CB CG sing N N 214 LYS CB HB2 sing N N 215 LYS CB HB3 sing N N 216 LYS CG CD sing N N 217 LYS CG HG2 sing N N 218 LYS CG HG3 sing N N 219 LYS CD CE sing N N 220 LYS CD HD2 sing N N 221 LYS CD HD3 sing N N 222 LYS CE NZ sing N N 223 LYS CE HE2 sing N N 224 LYS CE HE3 sing N N 225 LYS NZ HZ1 sing N N 226 LYS NZ HZ2 sing N N 227 LYS NZ HZ3 sing N N 228 LYS OXT HXT sing N N 229 MET N CA sing N N 230 MET N H sing N N 231 MET N H2 sing N N 232 MET CA C sing N N 233 MET CA CB sing N N 234 MET CA HA sing N N 235 MET C O doub N N 236 MET C OXT sing N N 237 MET CB CG sing N N 238 MET CB HB2 sing N N 239 MET CB HB3 sing N N 240 MET CG SD sing N N 241 MET CG HG2 sing N N 242 MET CG HG3 sing N N 243 MET SD CE sing N N 244 MET CE HE1 sing N N 245 MET CE HE2 sing N N 246 MET CE HE3 sing N N 247 MET OXT HXT sing N N 248 PHE N CA sing N N 249 PHE N H sing N N 250 PHE N H2 sing N N 251 PHE CA C sing N N 252 PHE CA CB sing N N 253 PHE CA HA sing N N 254 PHE C O doub N N 255 PHE C OXT sing N N 256 PHE CB CG sing N N 257 PHE CB HB2 sing N N 258 PHE CB HB3 sing N N 259 PHE CG CD1 doub Y N 260 PHE CG CD2 sing Y N 261 PHE CD1 CE1 sing Y N 262 PHE CD1 HD1 sing N N 263 PHE CD2 CE2 doub Y N 264 PHE CD2 HD2 sing N N 265 PHE CE1 CZ doub Y N 266 PHE CE1 HE1 sing N N 267 PHE CE2 CZ sing Y N 268 PHE CE2 HE2 sing N N 269 PHE CZ HZ sing N N 270 PHE OXT HXT sing N N 271 PRO N CA sing N N 272 PRO N CD sing N N 273 PRO N H sing N N 274 PRO CA C sing N N 275 PRO CA CB sing N N 276 PRO CA HA sing N N 277 PRO C O doub N N 278 PRO C OXT sing N N 279 PRO CB CG sing N N 280 PRO CB HB2 sing N N 281 PRO CB HB3 sing N N 282 PRO CG CD sing N N 283 PRO CG HG2 sing N N 284 PRO CG HG3 sing N N 285 PRO CD HD2 sing N N 286 PRO CD HD3 sing N N 287 PRO OXT HXT sing N N 288 SER N CA sing N N 289 SER N H sing N N 290 SER N H2 sing N N 291 SER CA C sing N N 292 SER CA CB sing N N 293 SER CA HA sing N N 294 SER C O doub N N 295 SER C OXT sing N N 296 SER CB OG sing N N 297 SER CB HB2 sing N N 298 SER CB HB3 sing N N 299 SER OG HG sing N N 300 SER OXT HXT sing N N 301 THR N CA sing N N 302 THR N H sing N N 303 THR N H2 sing N N 304 THR CA C sing N N 305 THR CA CB sing N N 306 THR CA HA sing N N 307 THR C O doub N N 308 THR C OXT sing N N 309 THR CB OG1 sing N N 310 THR CB CG2 sing N N 311 THR CB HB sing N N 312 THR OG1 HG1 sing N N 313 THR CG2 HG21 sing N N 314 THR CG2 HG22 sing N N 315 THR CG2 HG23 sing N N 316 THR OXT HXT sing N N 317 TRP N CA sing N N 318 TRP N H sing N N 319 TRP N H2 sing N N 320 TRP CA C sing N N 321 TRP CA CB sing N N 322 TRP CA HA sing N N 323 TRP C O doub N N 324 TRP C OXT sing N N 325 TRP CB CG sing N N 326 TRP CB HB2 sing N N 327 TRP CB HB3 sing N N 328 TRP CG CD1 doub Y N 329 TRP CG CD2 sing Y N 330 TRP CD1 NE1 sing Y N 331 TRP CD1 HD1 sing N N 332 TRP CD2 CE2 doub Y N 333 TRP CD2 CE3 sing Y N 334 TRP NE1 CE2 sing Y N 335 TRP NE1 HE1 sing N N 336 TRP CE2 CZ2 sing Y N 337 TRP CE3 CZ3 doub Y N 338 TRP CE3 HE3 sing N N 339 TRP CZ2 CH2 doub Y N 340 TRP CZ2 HZ2 sing N N 341 TRP CZ3 CH2 sing Y N 342 TRP CZ3 HZ3 sing N N 343 TRP CH2 HH2 sing N N 344 TRP OXT HXT sing N N 345 TYR N CA sing N N 346 TYR N H sing N N 347 TYR N H2 sing N N 348 TYR CA C sing N N 349 TYR CA CB sing N N 350 TYR CA HA sing N N 351 TYR C O doub N N 352 TYR C OXT sing N N 353 TYR CB CG sing N N 354 TYR CB HB2 sing N N 355 TYR CB HB3 sing N N 356 TYR CG CD1 doub Y N 357 TYR CG CD2 sing Y N 358 TYR CD1 CE1 sing Y N 359 TYR CD1 HD1 sing N N 360 TYR CD2 CE2 doub Y N 361 TYR CD2 HD2 sing N N 362 TYR CE1 CZ doub Y N 363 TYR CE1 HE1 sing N N 364 TYR CE2 CZ sing Y N 365 TYR CE2 HE2 sing N N 366 TYR CZ OH sing N N 367 TYR OH HH sing N N 368 TYR OXT HXT sing N N 369 VAL N CA sing N N 370 VAL N H sing N N 371 VAL N H2 sing N N 372 VAL CA C sing N N 373 VAL CA CB sing N N 374 VAL CA HA sing N N 375 VAL C O doub N N 376 VAL C OXT sing N N 377 VAL CB CG1 sing N N 378 VAL CB CG2 sing N N 379 VAL CB HB sing N N 380 VAL CG1 HG11 sing N N 381 VAL CG1 HG12 sing N N 382 VAL CG1 HG13 sing N N 383 VAL CG2 HG21 sing N N 384 VAL CG2 HG22 sing N N 385 VAL CG2 HG23 sing N N 386 VAL OXT HXT sing N N 387 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "ADENOSINE-5'-DIPHOSPHATE" ADP 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1O13 _pdbx_initial_refinement_model.details ? #