HEADER OXIDOREDUCTASE 25-APR-07 2YX9 TITLE CRYSTAL STRUCTURE OF D298K COPPER AMINE OXIDASE FROM ARTHROBACTER TITLE 2 GLOBIFORMIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHENYLETHYLAMINE OXIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: AMINE OXIDASE; COMPND 5 EC: 1.4.3.6; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARTHROBACTER GLOBIFORMIS; SOURCE 3 ORGANISM_TAXID: 1665; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: CD03; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PEPO-02-D298K KEYWDS TOPAQUINONE, LYSINE TYROSYLQUINONE, TPQ, LTQ, COFACTOR, BIOGENESIS, KEYWDS 2 COPPER, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR T.MURAKAWA,T.OKAJIMA,H.YAMAGUCHI,K.TANIZAWA REVDAT 5 15-NOV-23 2YX9 1 LINK REVDAT 4 25-OCT-23 2YX9 1 REMARK REVDAT 3 10-NOV-21 2YX9 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 2YX9 1 VERSN REVDAT 1 08-APR-08 2YX9 0 JRNL AUTH R.H.MOORE,M.A.SPIES,M.B.CULPEPPER,T.MURAKAWA,S.HIROTA, JRNL AUTH 2 T.OKAJIMA,K.TANIZAWA,M.MURE JRNL TITL TRAPPING OF A DOPAQUINONE INTERMEDIATE IN THE TPQ COFACTOR JRNL TITL 2 BIOGENESIS IN A COPPER-CONTAINING AMINE OXIDASE FROM JRNL TITL 3 ARTHROBACTER GLOBIFORMIS. JRNL REF J.AM.CHEM.SOC. V. 129 11524 2007 JRNL REFN ISSN 0002-7863 JRNL PMID 17715921 JRNL DOI 10.1021/JA0731165 REMARK 2 REMARK 2 RESOLUTION. 1.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2955601.130 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 190506 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 9539 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.68 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 29513 REMARK 3 BIN R VALUE (WORKING SET) : 0.3290 REMARK 3 BIN FREE R VALUE : 0.3590 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 1518 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.009 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9736 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 1135 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.67000 REMARK 3 B22 (A**2) : 11.35000 REMARK 3 B33 (A**2) : -4.68000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.65000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.25 REMARK 3 ESD FROM SIGMAA (A) : 0.23 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.26 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.750 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.130 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.720 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.920 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.880 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.40 REMARK 3 BSOL : 34.30 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YX9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-APR-07. REMARK 100 THE DEPOSITION ID IS D_1000027249. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER DIP-6040 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 190511 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.680 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.700 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.33800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1IU7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.05M POTASSIUM TARTRATE, 25MM HEPES REMARK 280 (PH6.8), MICRODIALYSIS, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 44.57950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.51350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 85.38014 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 44.57950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.51350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 85.38014 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 PRO A 3 REMARK 465 SER A 4 REMARK 465 THR A 5 REMARK 465 ILE A 6 REMARK 465 GLN A 7 REMARK 465 THR A 8 REMARK 465 PRO A 629 REMARK 465 SER A 630 REMARK 465 GLN A 631 REMARK 465 SER A 632 REMARK 465 GLY A 633 REMARK 465 SER A 634 REMARK 465 HIS A 635 REMARK 465 CYS A 636 REMARK 465 HIS A 637 REMARK 465 GLY A 638 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 PRO B 3 REMARK 465 SER B 4 REMARK 465 THR B 5 REMARK 465 ILE B 6 REMARK 465 GLN B 7 REMARK 465 THR B 8 REMARK 465 PRO B 629 REMARK 465 SER B 630 REMARK 465 GLN B 631 REMARK 465 SER B 632 REMARK 465 GLY B 633 REMARK 465 SER B 634 REMARK 465 HIS B 635 REMARK 465 CYS B 636 REMARK 465 HIS B 637 REMARK 465 GLY B 638 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 54 85.65 -47.58 REMARK 500 GLU A 56 98.29 -22.71 REMARK 500 PHE A 142 -126.12 -131.55 REMARK 500 TYR A 204 2.25 -67.69 REMARK 500 ASN A 236 15.39 -144.45 REMARK 500 GLU A 241 58.35 38.66 REMARK 500 LYS A 242 -13.57 78.62 REMARK 500 ILE A 271 -56.24 -127.82 REMARK 500 LEU A 303 91.06 76.49 REMARK 500 THR A 403 -156.99 -151.43 REMARK 500 ALA A 442 50.87 -157.76 REMARK 500 ASN A 464 51.07 -156.57 REMARK 500 SER A 471 -152.99 -139.49 REMARK 500 ASP A 488 80.58 -154.15 REMARK 500 GLU B 54 -78.52 -48.27 REMARK 500 PHE B 142 -140.44 -134.50 REMARK 500 ASN B 236 16.44 -147.41 REMARK 500 LYS B 242 -16.10 82.61 REMARK 500 ILE B 271 -55.46 -129.34 REMARK 500 LEU B 303 89.66 76.08 REMARK 500 CYS B 315 -64.02 -109.83 REMARK 500 THR B 403 -153.46 -150.28 REMARK 500 ALA B 442 51.98 -155.54 REMARK 500 ASN B 464 50.62 -158.23 REMARK 500 SER B 471 -152.11 -140.06 REMARK 500 ASP B 488 80.92 -153.57 REMARK 500 ARG B 619 -178.96 -179.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A1001 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 431 NE2 REMARK 620 2 HIS A 433 NE2 99.3 REMARK 620 3 HIS A 592 ND1 97.3 154.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B1002 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 431 NE2 REMARK 620 2 HIS B 433 NE2 96.6 REMARK 620 3 HIS B 592 ND1 98.4 156.6 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 1002 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1IU7 RELATED DB: PDB REMARK 900 WILD-TYPE ENZYME DBREF 2YX9 A 1 638 UNP P46881 PAOX_ARTGO 1 638 DBREF 2YX9 B 1 638 UNP P46881 PAOX_ARTGO 1 638 SEQADV 2YX9 LYS A 298 UNP P46881 ASP 298 ENGINEERED MUTATION SEQADV 2YX9 LYS B 298 UNP P46881 ASP 298 ENGINEERED MUTATION SEQRES 1 A 638 MET THR PRO SER THR ILE GLN THR ALA SER PRO PHE ARG SEQRES 2 A 638 LEU ALA SER ALA GLY GLU ILE SER GLU VAL GLN GLY ILE SEQRES 3 A 638 LEU ARG THR ALA GLY LEU LEU GLY PRO GLU LYS ARG ILE SEQRES 4 A 638 ALA TYR LEU GLY VAL LEU ASP PRO ALA ARG GLY ALA GLY SEQRES 5 A 638 SER GLU ALA GLU ASP ARG ARG PHE ARG VAL PHE ILE HIS SEQRES 6 A 638 ASP VAL SER GLY ALA ARG PRO GLN GLU VAL THR VAL SER SEQRES 7 A 638 VAL THR ASN GLY THR VAL ILE SER ALA VAL GLU LEU ASP SEQRES 8 A 638 THR ALA ALA THR GLY GLU LEU PRO VAL LEU GLU GLU GLU SEQRES 9 A 638 PHE GLU VAL VAL GLU GLN LEU LEU ALA THR ASP GLU ARG SEQRES 10 A 638 TRP LEU LYS ALA LEU ALA ALA ARG ASN LEU ASP VAL SER SEQRES 11 A 638 LYS VAL ARG VAL ALA PRO LEU SER ALA GLY VAL PHE GLU SEQRES 12 A 638 TYR ALA GLU GLU ARG GLY ARG ARG ILE LEU ARG GLY LEU SEQRES 13 A 638 ALA PHE VAL GLN ASP PHE PRO GLU ASP SER ALA TRP ALA SEQRES 14 A 638 HIS PRO VAL ASP GLY LEU VAL ALA TYR VAL ASP VAL VAL SEQRES 15 A 638 SER LYS GLU VAL THR ARG VAL ILE ASP THR GLY VAL PHE SEQRES 16 A 638 PRO VAL PRO ALA GLU HIS GLY ASN TYR THR ASP PRO GLU SEQRES 17 A 638 LEU THR GLY PRO LEU ARG THR THR GLN LYS PRO ILE SER SEQRES 18 A 638 ILE THR GLN PRO GLU GLY PRO SER PHE THR VAL THR GLY SEQRES 19 A 638 GLY ASN HIS ILE GLU TRP GLU LYS TRP SER LEU ASP VAL SEQRES 20 A 638 GLY PHE ASP VAL ARG GLU GLY VAL VAL LEU HIS ASN ILE SEQRES 21 A 638 ALA PHE ARG ASP GLY ASP ARG LEU ARG PRO ILE ILE ASN SEQRES 22 A 638 ARG ALA SER ILE ALA GLU MET VAL VAL PRO TYR GLY ASP SEQRES 23 A 638 PRO SER PRO ILE ARG SER TRP GLN ASN TYR PHE LYS THR SEQRES 24 A 638 GLY GLU TYR LEU VAL GLY GLN TYR ALA ASN SER LEU GLU SEQRES 25 A 638 LEU GLY CYS ASP CYS LEU GLY ASP ILE THR TYR LEU SER SEQRES 26 A 638 PRO VAL ILE SER ASP ALA PHE GLY ASN PRO ARG GLU ILE SEQRES 27 A 638 ARG ASN GLY ILE CYS MET HIS GLU GLU ASP TRP GLY ILE SEQRES 28 A 638 LEU ALA LYS HIS SER ASP LEU TRP SER GLY ILE ASN TYR SEQRES 29 A 638 THR ARG ARG ASN ARG ARG MET VAL ILE SER PHE PHE THR SEQRES 30 A 638 THR ILE GLY ASN DPQ ASP TYR GLY PHE TYR TRP TYR LEU SEQRES 31 A 638 TYR LEU ASP GLY THR ILE GLU PHE GLU ALA LYS ALA THR SEQRES 32 A 638 GLY VAL VAL PHE THR SER ALA PHE PRO GLU GLY GLY SER SEQRES 33 A 638 ASP ASN ILE SER GLN LEU ALA PRO GLY LEU GLY ALA PRO SEQRES 34 A 638 PHE HIS GLN HIS ILE PHE SER ALA ARG LEU ASP MET ALA SEQRES 35 A 638 ILE ASP GLY PHE THR ASN ARG VAL GLU GLU GLU ASP VAL SEQRES 36 A 638 VAL ARG GLN THR MET GLY PRO GLY ASN GLU ARG GLY ASN SEQRES 37 A 638 ALA PHE SER ARG LYS ARG THR VAL LEU THR ARG GLU SER SEQRES 38 A 638 GLU ALA VAL ARG GLU ALA ASP ALA ARG THR GLY ARG THR SEQRES 39 A 638 TRP ILE ILE SER ASN PRO GLU SER LYS ASN ARG LEU ASN SEQRES 40 A 638 GLU PRO VAL GLY TYR LYS LEU HIS ALA HIS ASN GLN PRO SEQRES 41 A 638 THR LEU LEU ALA ASP PRO GLY SER SER ILE ALA ARG ARG SEQRES 42 A 638 ALA ALA PHE ALA THR LYS ASP LEU TRP VAL THR ARG TYR SEQRES 43 A 638 ALA ASP ASP GLU ARG TYR PRO THR GLY ASP PHE VAL ASN SEQRES 44 A 638 GLN HIS SER GLY GLY ALA GLY LEU PRO SER TYR ILE ALA SEQRES 45 A 638 GLN ASP ARG ASP ILE ASP GLY GLN ASP ILE VAL VAL TRP SEQRES 46 A 638 HIS THR PHE GLY LEU THR HIS PHE PRO ARG VAL GLU ASP SEQRES 47 A 638 TRP PRO ILE MET PRO VAL ASP THR VAL GLY PHE LYS LEU SEQRES 48 A 638 ARG PRO GLU GLY PHE PHE ASP ARG SER PRO VAL LEU ASP SEQRES 49 A 638 VAL PRO ALA ASN PRO SER GLN SER GLY SER HIS CYS HIS SEQRES 50 A 638 GLY SEQRES 1 B 638 MET THR PRO SER THR ILE GLN THR ALA SER PRO PHE ARG SEQRES 2 B 638 LEU ALA SER ALA GLY GLU ILE SER GLU VAL GLN GLY ILE SEQRES 3 B 638 LEU ARG THR ALA GLY LEU LEU GLY PRO GLU LYS ARG ILE SEQRES 4 B 638 ALA TYR LEU GLY VAL LEU ASP PRO ALA ARG GLY ALA GLY SEQRES 5 B 638 SER GLU ALA GLU ASP ARG ARG PHE ARG VAL PHE ILE HIS SEQRES 6 B 638 ASP VAL SER GLY ALA ARG PRO GLN GLU VAL THR VAL SER SEQRES 7 B 638 VAL THR ASN GLY THR VAL ILE SER ALA VAL GLU LEU ASP SEQRES 8 B 638 THR ALA ALA THR GLY GLU LEU PRO VAL LEU GLU GLU GLU SEQRES 9 B 638 PHE GLU VAL VAL GLU GLN LEU LEU ALA THR ASP GLU ARG SEQRES 10 B 638 TRP LEU LYS ALA LEU ALA ALA ARG ASN LEU ASP VAL SER SEQRES 11 B 638 LYS VAL ARG VAL ALA PRO LEU SER ALA GLY VAL PHE GLU SEQRES 12 B 638 TYR ALA GLU GLU ARG GLY ARG ARG ILE LEU ARG GLY LEU SEQRES 13 B 638 ALA PHE VAL GLN ASP PHE PRO GLU ASP SER ALA TRP ALA SEQRES 14 B 638 HIS PRO VAL ASP GLY LEU VAL ALA TYR VAL ASP VAL VAL SEQRES 15 B 638 SER LYS GLU VAL THR ARG VAL ILE ASP THR GLY VAL PHE SEQRES 16 B 638 PRO VAL PRO ALA GLU HIS GLY ASN TYR THR ASP PRO GLU SEQRES 17 B 638 LEU THR GLY PRO LEU ARG THR THR GLN LYS PRO ILE SER SEQRES 18 B 638 ILE THR GLN PRO GLU GLY PRO SER PHE THR VAL THR GLY SEQRES 19 B 638 GLY ASN HIS ILE GLU TRP GLU LYS TRP SER LEU ASP VAL SEQRES 20 B 638 GLY PHE ASP VAL ARG GLU GLY VAL VAL LEU HIS ASN ILE SEQRES 21 B 638 ALA PHE ARG ASP GLY ASP ARG LEU ARG PRO ILE ILE ASN SEQRES 22 B 638 ARG ALA SER ILE ALA GLU MET VAL VAL PRO TYR GLY ASP SEQRES 23 B 638 PRO SER PRO ILE ARG SER TRP GLN ASN TYR PHE LYS THR SEQRES 24 B 638 GLY GLU TYR LEU VAL GLY GLN TYR ALA ASN SER LEU GLU SEQRES 25 B 638 LEU GLY CYS ASP CYS LEU GLY ASP ILE THR TYR LEU SER SEQRES 26 B 638 PRO VAL ILE SER ASP ALA PHE GLY ASN PRO ARG GLU ILE SEQRES 27 B 638 ARG ASN GLY ILE CYS MET HIS GLU GLU ASP TRP GLY ILE SEQRES 28 B 638 LEU ALA LYS HIS SER ASP LEU TRP SER GLY ILE ASN TYR SEQRES 29 B 638 THR ARG ARG ASN ARG ARG MET VAL ILE SER PHE PHE THR SEQRES 30 B 638 THR ILE GLY ASN DPQ ASP TYR GLY PHE TYR TRP TYR LEU SEQRES 31 B 638 TYR LEU ASP GLY THR ILE GLU PHE GLU ALA LYS ALA THR SEQRES 32 B 638 GLY VAL VAL PHE THR SER ALA PHE PRO GLU GLY GLY SER SEQRES 33 B 638 ASP ASN ILE SER GLN LEU ALA PRO GLY LEU GLY ALA PRO SEQRES 34 B 638 PHE HIS GLN HIS ILE PHE SER ALA ARG LEU ASP MET ALA SEQRES 35 B 638 ILE ASP GLY PHE THR ASN ARG VAL GLU GLU GLU ASP VAL SEQRES 36 B 638 VAL ARG GLN THR MET GLY PRO GLY ASN GLU ARG GLY ASN SEQRES 37 B 638 ALA PHE SER ARG LYS ARG THR VAL LEU THR ARG GLU SER SEQRES 38 B 638 GLU ALA VAL ARG GLU ALA ASP ALA ARG THR GLY ARG THR SEQRES 39 B 638 TRP ILE ILE SER ASN PRO GLU SER LYS ASN ARG LEU ASN SEQRES 40 B 638 GLU PRO VAL GLY TYR LYS LEU HIS ALA HIS ASN GLN PRO SEQRES 41 B 638 THR LEU LEU ALA ASP PRO GLY SER SER ILE ALA ARG ARG SEQRES 42 B 638 ALA ALA PHE ALA THR LYS ASP LEU TRP VAL THR ARG TYR SEQRES 43 B 638 ALA ASP ASP GLU ARG TYR PRO THR GLY ASP PHE VAL ASN SEQRES 44 B 638 GLN HIS SER GLY GLY ALA GLY LEU PRO SER TYR ILE ALA SEQRES 45 B 638 GLN ASP ARG ASP ILE ASP GLY GLN ASP ILE VAL VAL TRP SEQRES 46 B 638 HIS THR PHE GLY LEU THR HIS PHE PRO ARG VAL GLU ASP SEQRES 47 B 638 TRP PRO ILE MET PRO VAL ASP THR VAL GLY PHE LYS LEU SEQRES 48 B 638 ARG PRO GLU GLY PHE PHE ASP ARG SER PRO VAL LEU ASP SEQRES 49 B 638 VAL PRO ALA ASN PRO SER GLN SER GLY SER HIS CYS HIS SEQRES 50 B 638 GLY MODRES 2YX9 DPQ A 382 TYR MODRES 2YX9 DPQ B 382 TYR HET DPQ A 382 13 HET DPQ B 382 13 HET CU A1001 1 HET CU B1002 1 HETNAM DPQ (S)-2-AMINO-3-(4-HYDROXY-3-OXOCYCLOHEXA-1,4-DIENYL) HETNAM 2 DPQ PROPANOIC ACID HETNAM CU COPPER (II) ION FORMUL 1 DPQ 2(C9 H11 N O4) FORMUL 3 CU 2(CU 2+) FORMUL 5 HOH *1135(H2 O) HELIX 1 1 SER A 16 ALA A 30 1 15 HELIX 2 2 ASP A 91 GLY A 96 1 6 HELIX 3 3 LEU A 101 ALA A 113 1 13 HELIX 4 4 ASP A 115 ARG A 125 1 11 HELIX 5 5 ASP A 128 SER A 130 5 3 HELIX 6 6 TYR A 144 ARG A 148 5 5 HELIX 7 7 SER A 166 HIS A 170 5 5 HELIX 8 8 ASP A 206 GLY A 211 1 6 HELIX 9 9 LEU A 303 ALA A 308 5 6 HELIX 10 10 ARG A 479 GLU A 482 5 4 HELIX 11 11 ASP A 488 GLY A 492 5 5 HELIX 12 12 SER A 528 ALA A 534 1 7 HELIX 13 13 ALA A 535 LYS A 539 5 5 HELIX 14 14 GLY A 566 ALA A 572 1 7 HELIX 15 15 ARG A 595 TRP A 599 5 5 HELIX 16 16 SER B 16 ALA B 30 1 15 HELIX 17 17 ASP B 91 GLY B 96 1 6 HELIX 18 18 LEU B 101 GLU B 106 1 6 HELIX 19 19 GLU B 106 ALA B 113 1 8 HELIX 20 20 ASP B 115 ARG B 125 1 11 HELIX 21 21 ASP B 128 SER B 130 5 3 HELIX 22 22 TYR B 144 ARG B 148 5 5 HELIX 23 23 SER B 166 HIS B 170 5 5 HELIX 24 24 ASP B 206 GLY B 211 1 6 HELIX 25 25 LEU B 303 ALA B 308 5 6 HELIX 26 26 ARG B 479 GLU B 482 5 4 HELIX 27 27 ASP B 488 GLY B 492 5 5 HELIX 28 28 SER B 528 ALA B 534 1 7 HELIX 29 29 ALA B 535 LYS B 539 5 5 HELIX 30 30 GLY B 566 ALA B 572 1 7 HELIX 31 31 ARG B 595 TRP B 599 5 5 SHEET 1 A 4 LYS A 37 VAL A 44 0 SHEET 2 A 4 ARG A 59 ASP A 66 -1 O HIS A 65 N ARG A 38 SHEET 3 A 4 GLN A 73 SER A 78 -1 O GLN A 73 N ILE A 64 SHEET 4 A 4 THR A 83 GLU A 89 -1 O THR A 83 N SER A 78 SHEET 1 B 4 VAL A 132 SER A 138 0 SHEET 2 B 4 ILE A 152 VAL A 159 -1 O ARG A 154 N LEU A 137 SHEET 3 B 4 LEU A 175 ASP A 180 -1 O VAL A 179 N LEU A 153 SHEET 4 B 4 GLU A 185 ASP A 191 -1 O ILE A 190 N VAL A 176 SHEET 1 C 2 SER A 221 THR A 223 0 SHEET 2 C 2 SER B 221 THR B 223 -1 O THR B 223 N SER A 221 SHEET 1 D 6 THR A 231 THR A 233 0 SHEET 2 D 6 HIS A 237 TRP A 240 -1 O HIS A 237 N THR A 233 SHEET 3 D 6 TRP A 243 ASP A 250 -1 O LEU A 245 N ILE A 238 SHEET 4 D 6 GLY A 254 ASP A 264 -1 O VAL A 256 N GLY A 248 SHEET 5 D 6 ARG A 267 PRO A 283 -1 O ARG A 269 N PHE A 262 SHEET 6 D 6 ASN A 295 PHE A 297 -1 O TYR A 296 N VAL A 282 SHEET 1 E 9 THR A 231 THR A 233 0 SHEET 2 E 9 HIS A 237 TRP A 240 -1 O HIS A 237 N THR A 233 SHEET 3 E 9 TRP A 243 ASP A 250 -1 O LEU A 245 N ILE A 238 SHEET 4 E 9 GLY A 254 ASP A 264 -1 O VAL A 256 N GLY A 248 SHEET 5 E 9 ARG A 267 PRO A 283 -1 O ARG A 269 N PHE A 262 SHEET 6 E 9 HIS A 431 MET A 441 -1 O ASP A 440 N ARG A 274 SHEET 7 E 9 ILE A 582 HIS A 592 -1 O VAL A 584 N LEU A 439 SHEET 8 E 9 LEU A 541 ARG A 545 -1 N TRP A 542 O TRP A 585 SHEET 9 E 9 VAL A 484 ARG A 485 -1 N ARG A 485 O LEU A 541 SHEET 1 F10 THR A 322 LEU A 324 0 SHEET 2 F10 ILE A 342 SER A 356 -1 O MET A 344 N THR A 322 SHEET 3 F10 ASN A 363 ILE A 379 -1 O VAL A 372 N HIS A 345 SHEET 4 F10 DPQ A 382 TYR A 391 -1 O TYR A 384 N THR A 377 SHEET 5 F10 ILE A 396 GLY A 404 -1 O GLU A 397 N TYR A 389 SHEET 6 F10 MET A 602 GLU A 614 -1 O VAL A 607 N ALA A 400 SHEET 7 F10 PRO A 509 ALA A 516 -1 N LYS A 513 O ARG A 612 SHEET 8 F10 THR A 494 LYS A 503 -1 N TRP A 495 O LEU A 514 SHEET 9 F10 ARG A 449 ARG A 457 -1 N GLU A 451 O ILE A 496 SHEET 10 F10 PHE A 470 LEU A 477 -1 O SER A 471 N VAL A 456 SHEET 1 G 2 VAL A 327 SER A 329 0 SHEET 2 G 2 PRO A 335 GLU A 337 -1 O ARG A 336 N ILE A 328 SHEET 1 H 3 SER A 409 ALA A 410 0 SHEET 2 H 3 LEU A 426 PRO A 429 -1 O GLY A 427 N SER A 409 SHEET 3 H 3 ILE A 419 ALA A 423 -1 N LEU A 422 O LEU A 426 SHEET 1 I 4 LYS B 37 VAL B 44 0 SHEET 2 I 4 ARG B 59 ASP B 66 -1 O HIS B 65 N ARG B 38 SHEET 3 I 4 GLN B 73 SER B 78 -1 O GLN B 73 N ILE B 64 SHEET 4 I 4 THR B 83 GLU B 89 -1 O THR B 83 N SER B 78 SHEET 1 J 4 VAL B 132 SER B 138 0 SHEET 2 J 4 ILE B 152 VAL B 159 -1 O LEU B 156 N ALA B 135 SHEET 3 J 4 LEU B 175 ASP B 180 -1 O ALA B 177 N GLY B 155 SHEET 4 J 4 GLU B 185 ASP B 191 -1 O ILE B 190 N VAL B 176 SHEET 1 K 6 THR B 231 THR B 233 0 SHEET 2 K 6 HIS B 237 TRP B 240 -1 O HIS B 237 N THR B 233 SHEET 3 K 6 TRP B 243 ASP B 250 -1 O LEU B 245 N ILE B 238 SHEET 4 K 6 GLY B 254 ASP B 264 -1 O VAL B 256 N GLY B 248 SHEET 5 K 6 ARG B 267 PRO B 283 -1 O ARG B 269 N PHE B 262 SHEET 6 K 6 ASN B 295 PHE B 297 -1 O TYR B 296 N VAL B 282 SHEET 1 L 9 THR B 231 THR B 233 0 SHEET 2 L 9 HIS B 237 TRP B 240 -1 O HIS B 237 N THR B 233 SHEET 3 L 9 TRP B 243 ASP B 250 -1 O LEU B 245 N ILE B 238 SHEET 4 L 9 GLY B 254 ASP B 264 -1 O VAL B 256 N GLY B 248 SHEET 5 L 9 ARG B 267 PRO B 283 -1 O ARG B 269 N PHE B 262 SHEET 6 L 9 HIS B 431 MET B 441 -1 O ILE B 434 N VAL B 281 SHEET 7 L 9 ILE B 582 HIS B 592 -1 O VAL B 584 N LEU B 439 SHEET 8 L 9 LEU B 541 ARG B 545 -1 N TRP B 542 O TRP B 585 SHEET 9 L 9 VAL B 484 ARG B 485 -1 N ARG B 485 O LEU B 541 SHEET 1 M10 THR B 322 LEU B 324 0 SHEET 2 M10 ILE B 342 SER B 356 -1 O MET B 344 N THR B 322 SHEET 3 M10 ASN B 363 ILE B 379 -1 O VAL B 372 N HIS B 345 SHEET 4 M10 DPQ B 382 TYR B 391 -1 O TYR B 384 N THR B 377 SHEET 5 M10 ILE B 396 GLY B 404 -1 O GLU B 397 N TYR B 389 SHEET 6 M10 MET B 602 GLU B 614 -1 O VAL B 607 N ALA B 400 SHEET 7 M10 PRO B 509 ALA B 516 -1 N LYS B 513 O ARG B 612 SHEET 8 M10 THR B 494 LYS B 503 -1 N TRP B 495 O LEU B 514 SHEET 9 M10 ARG B 449 ARG B 457 -1 N GLU B 451 O ILE B 496 SHEET 10 M10 PHE B 470 LEU B 477 -1 O SER B 471 N VAL B 456 SHEET 1 N 2 VAL B 327 SER B 329 0 SHEET 2 N 2 PRO B 335 GLU B 337 -1 O ARG B 336 N ILE B 328 SHEET 1 O 3 SER B 409 ALA B 410 0 SHEET 2 O 3 LEU B 426 PRO B 429 -1 O GLY B 427 N SER B 409 SHEET 3 O 3 ILE B 419 ALA B 423 -1 N LEU B 422 O LEU B 426 SSBOND 1 CYS A 317 CYS A 343 1555 1555 2.03 SSBOND 2 CYS B 317 CYS B 343 1555 1555 2.03 LINK NZ LYS A 298 CD1 DPQ A 382 1555 1555 1.35 LINK NZ LYS B 298 CD1 DPQ B 382 1555 1555 1.35 LINK NE2 HIS A 431 CU CU A1001 1555 1555 2.08 LINK NE2 HIS A 433 CU CU A1001 1555 1555 2.13 LINK ND1 HIS A 592 CU CU A1001 1555 1555 2.19 LINK NE2 HIS B 431 CU CU B1002 1555 1555 2.09 LINK NE2 HIS B 433 CU CU B1002 1555 1555 2.16 LINK ND1 HIS B 592 CU CU B1002 1555 1555 2.17 CISPEP 1 TRP A 599 PRO A 600 0 0.29 CISPEP 2 TRP B 599 PRO B 600 0 0.28 SITE 1 AC1 4 HIS A 431 HIS A 433 HIS A 592 HOH A1351 SITE 1 AC2 4 HIS B 431 HIS B 433 HIS B 592 HOH B1408 CRYST1 158.012 63.027 184.119 90.00 111.96 90.00 I 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006329 0.000000 0.002552 0.00000 SCALE2 0.000000 0.015866 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005856 0.00000