HEADER HYDROLASE 30-APR-07 2YYH TITLE CRYSTAL STRUCTURE OF NUDIX FAMILY PROTEIN FROM AQUIFEX AEOLICUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 8-OXO-DGTPASE DOMAIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: MUTT DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS; SOURCE 3 ORGANISM_TAXID: 224324; SOURCE 4 STRAIN: VF5; SOURCE 5 GENE: MUTT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL-X; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-21A KEYWDS NUDIX FAMILY PROTEIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT KEYWDS 2 ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.NAKAGAWA,S.KISHISHITA,S.YOKOYAMA,S.KURAMITSU,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 13-JUL-11 2YYH 1 VERSN REVDAT 3 24-FEB-09 2YYH 1 VERSN REVDAT 2 11-DEC-07 2YYH 1 REMARK REVDAT 1 06-NOV-07 2YYH 0 JRNL AUTH N.NAKAKAGA,S.KISHISHITA,S.YOKOYAMA,S.KURAMITSU JRNL TITL CRYSTAL STRUCTURE OF NUDIX FAMILY PROTEIN FROM AQUIFEX JRNL TITL 2 AEOLICUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 389621.310 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 88647 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 4332 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 11718 REMARK 3 BIN R VALUE (WORKING SET) : 0.3000 REMARK 3 BIN FREE R VALUE : 0.3330 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 648 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.013 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4357 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 522 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.80000 REMARK 3 B22 (A**2) : 6.62000 REMARK 3 B33 (A**2) : -7.42000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.02000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM SIGMAA (A) : 0.22 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.23 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 2.00 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.98 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 50.26 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE FILE CONTAINS FRIEDEL PAIRS. REMARK 4 REMARK 4 2YYH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-JUL-07. REMARK 100 THE RCSB ID CODE IS RCSB027293. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAY-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97894, 0.9000, 0.97935 REMARK 200 MONOCHROMATOR : SI II REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU JUPITER 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 91555 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 2.750 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04200 REMARK 200 FOR THE DATA SET : 18.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.25000 REMARK 200 FOR SHELL : 1.960 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE FILE CONTAINS FRIEDEL PAIRS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.16M LICL, 16% PEG3350, PH 6.7, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 61.01000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 17.16800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 61.01000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 17.16800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH D 283 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 MSE B 1 REMARK 465 MSE C 1 REMARK 465 GLY C 2 REMARK 465 MSE D 1 REMARK 465 GLY D 2 REMARK 465 PHE D 3 REMARK 465 ASN D 4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 35 -83.48 2.51 REMARK 500 PRO A 36 84.73 -67.22 REMARK 500 ALA A 86 -177.12 178.49 REMARK 500 SER A 105 -130.90 58.45 REMARK 500 PHE A 125 -140.38 60.62 REMARK 500 PHE B 3 83.55 34.78 REMARK 500 LYS B 102 131.31 -172.06 REMARK 500 PHE B 125 -142.77 55.77 REMARK 500 ASN C 4 55.54 -149.30 REMARK 500 ALA C 86 -175.12 179.02 REMARK 500 SER C 105 -125.36 57.74 REMARK 500 PHE C 125 -142.98 53.12 REMARK 500 ALA D 86 -177.70 168.99 REMARK 500 PHE D 125 -146.53 57.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 204 DISTANCE = 5.04 ANGSTROMS REMARK 525 HOH B 233 DISTANCE = 5.40 ANGSTROMS REMARK 525 HOH C 226 DISTANCE = 5.14 ANGSTROMS REMARK 525 HOH D 242 DISTANCE = 5.40 ANGSTROMS REMARK 525 HOH D 268 DISTANCE = 5.47 ANGSTROMS REMARK 525 HOH D 269 DISTANCE = 5.62 ANGSTROMS REMARK 525 HOH D 284 DISTANCE = 5.29 ANGSTROMS REMARK 525 HOH D 286 DISTANCE = 6.74 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: AAE001001449.1 RELATED DB: TARGETDB DBREF 2YYH A 1 139 UNP O67435 O67435_AQUAE 1 139 DBREF 2YYH B 1 139 UNP O67435 O67435_AQUAE 1 139 DBREF 2YYH C 1 139 UNP O67435 O67435_AQUAE 1 139 DBREF 2YYH D 1 139 UNP O67435 O67435_AQUAE 1 139 SEQRES 1 A 139 MSE GLY PHE ASN VAL LYS THR PRO LEU LEU ALA THR ASP SEQRES 2 A 139 VAL ILE ILE ARG LEU TRP ASP GLY GLU ASN PHE LYS GLY SEQRES 3 A 139 ILE VAL LEU ILE GLU ARG LYS TYR PRO PRO VAL GLY LEU SEQRES 4 A 139 ALA LEU PRO GLY GLY PHE VAL GLU VAL GLY GLU ARG VAL SEQRES 5 A 139 GLU GLU ALA ALA ALA ARG GLU MSE ARG GLU GLU THR GLY SEQRES 6 A 139 LEU GLU VAL ARG LEU HIS LYS LEU MSE GLY VAL TYR SER SEQRES 7 A 139 ASP PRO GLU ARG ASP PRO ARG ALA HIS VAL VAL SER VAL SEQRES 8 A 139 VAL TRP ILE GLY ASP ALA GLN GLY GLU PRO LYS ALA GLY SEQRES 9 A 139 SER ASP ALA LYS LYS VAL LYS VAL TYR ARG LEU GLU GLU SEQRES 10 A 139 ILE PRO LEU ASP LYS LEU VAL PHE ASP HIS LYS LYS ILE SEQRES 11 A 139 ILE LEU ASP PHE LEU LYS GLY ASN TYR SEQRES 1 B 139 MSE GLY PHE ASN VAL LYS THR PRO LEU LEU ALA THR ASP SEQRES 2 B 139 VAL ILE ILE ARG LEU TRP ASP GLY GLU ASN PHE LYS GLY SEQRES 3 B 139 ILE VAL LEU ILE GLU ARG LYS TYR PRO PRO VAL GLY LEU SEQRES 4 B 139 ALA LEU PRO GLY GLY PHE VAL GLU VAL GLY GLU ARG VAL SEQRES 5 B 139 GLU GLU ALA ALA ALA ARG GLU MSE ARG GLU GLU THR GLY SEQRES 6 B 139 LEU GLU VAL ARG LEU HIS LYS LEU MSE GLY VAL TYR SER SEQRES 7 B 139 ASP PRO GLU ARG ASP PRO ARG ALA HIS VAL VAL SER VAL SEQRES 8 B 139 VAL TRP ILE GLY ASP ALA GLN GLY GLU PRO LYS ALA GLY SEQRES 9 B 139 SER ASP ALA LYS LYS VAL LYS VAL TYR ARG LEU GLU GLU SEQRES 10 B 139 ILE PRO LEU ASP LYS LEU VAL PHE ASP HIS LYS LYS ILE SEQRES 11 B 139 ILE LEU ASP PHE LEU LYS GLY ASN TYR SEQRES 1 C 139 MSE GLY PHE ASN VAL LYS THR PRO LEU LEU ALA THR ASP SEQRES 2 C 139 VAL ILE ILE ARG LEU TRP ASP GLY GLU ASN PHE LYS GLY SEQRES 3 C 139 ILE VAL LEU ILE GLU ARG LYS TYR PRO PRO VAL GLY LEU SEQRES 4 C 139 ALA LEU PRO GLY GLY PHE VAL GLU VAL GLY GLU ARG VAL SEQRES 5 C 139 GLU GLU ALA ALA ALA ARG GLU MSE ARG GLU GLU THR GLY SEQRES 6 C 139 LEU GLU VAL ARG LEU HIS LYS LEU MSE GLY VAL TYR SER SEQRES 7 C 139 ASP PRO GLU ARG ASP PRO ARG ALA HIS VAL VAL SER VAL SEQRES 8 C 139 VAL TRP ILE GLY ASP ALA GLN GLY GLU PRO LYS ALA GLY SEQRES 9 C 139 SER ASP ALA LYS LYS VAL LYS VAL TYR ARG LEU GLU GLU SEQRES 10 C 139 ILE PRO LEU ASP LYS LEU VAL PHE ASP HIS LYS LYS ILE SEQRES 11 C 139 ILE LEU ASP PHE LEU LYS GLY ASN TYR SEQRES 1 D 139 MSE GLY PHE ASN VAL LYS THR PRO LEU LEU ALA THR ASP SEQRES 2 D 139 VAL ILE ILE ARG LEU TRP ASP GLY GLU ASN PHE LYS GLY SEQRES 3 D 139 ILE VAL LEU ILE GLU ARG LYS TYR PRO PRO VAL GLY LEU SEQRES 4 D 139 ALA LEU PRO GLY GLY PHE VAL GLU VAL GLY GLU ARG VAL SEQRES 5 D 139 GLU GLU ALA ALA ALA ARG GLU MSE ARG GLU GLU THR GLY SEQRES 6 D 139 LEU GLU VAL ARG LEU HIS LYS LEU MSE GLY VAL TYR SER SEQRES 7 D 139 ASP PRO GLU ARG ASP PRO ARG ALA HIS VAL VAL SER VAL SEQRES 8 D 139 VAL TRP ILE GLY ASP ALA GLN GLY GLU PRO LYS ALA GLY SEQRES 9 D 139 SER ASP ALA LYS LYS VAL LYS VAL TYR ARG LEU GLU GLU SEQRES 10 D 139 ILE PRO LEU ASP LYS LEU VAL PHE ASP HIS LYS LYS ILE SEQRES 11 D 139 ILE LEU ASP PHE LEU LYS GLY ASN TYR MODRES 2YYH MSE A 60 MET SELENOMETHIONINE MODRES 2YYH MSE A 74 MET SELENOMETHIONINE MODRES 2YYH MSE B 60 MET SELENOMETHIONINE MODRES 2YYH MSE B 74 MET SELENOMETHIONINE MODRES 2YYH MSE C 60 MET SELENOMETHIONINE MODRES 2YYH MSE C 74 MET SELENOMETHIONINE MODRES 2YYH MSE D 60 MET SELENOMETHIONINE MODRES 2YYH MSE D 74 MET SELENOMETHIONINE HET MSE A 60 8 HET MSE A 74 8 HET MSE B 60 8 HET MSE B 74 8 HET MSE C 60 8 HET MSE C 74 8 HET MSE D 60 8 HET MSE D 74 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 5 HOH *522(H2 O) HELIX 1 1 ARG A 51 GLY A 65 1 15 HELIX 2 2 PRO A 119 LEU A 123 5 5 HELIX 3 3 ASP A 126 GLY A 137 1 12 HELIX 4 4 ARG B 51 GLY B 65 1 15 HELIX 5 5 ARG B 114 ILE B 118 5 5 HELIX 6 6 PRO B 119 LEU B 123 5 5 HELIX 7 7 ASP B 126 LYS B 136 1 11 HELIX 8 8 ARG C 51 GLY C 65 1 15 HELIX 9 9 ARG C 114 ILE C 118 5 5 HELIX 10 10 PRO C 119 LEU C 123 5 5 HELIX 11 11 ASP C 126 LYS C 136 1 11 HELIX 12 12 ARG D 51 GLY D 65 1 15 HELIX 13 13 ARG D 114 ILE D 118 5 5 HELIX 14 14 PRO D 119 LEU D 123 5 5 HELIX 15 15 ASP D 126 GLY D 137 1 12 SHEET 1 A 5 LEU A 39 ALA A 40 0 SHEET 2 A 5 ASN A 23 ARG A 32 -1 N ILE A 30 O ALA A 40 SHEET 3 A 5 LEU A 9 ASP A 20 -1 N LEU A 18 O GLY A 26 SHEET 4 A 5 VAL A 88 GLN A 98 1 O TRP A 93 N ILE A 15 SHEET 5 A 5 ARG A 69 TYR A 77 -1 N GLY A 75 O VAL A 92 SHEET 1 B 4 GLY A 43 PHE A 45 0 SHEET 2 B 4 LEU A 9 ASP A 20 -1 N THR A 12 O GLY A 44 SHEET 3 B 4 ASN A 23 ARG A 32 -1 O GLY A 26 N LEU A 18 SHEET 4 B 4 ALA A 107 TYR A 113 -1 O LYS A 111 N LEU A 29 SHEET 1 C 5 GLY B 38 ALA B 40 0 SHEET 2 C 5 ASN B 23 ARG B 32 -1 N ILE B 30 O ALA B 40 SHEET 3 C 5 LEU B 9 ASP B 20 -1 N LEU B 18 O LYS B 25 SHEET 4 C 5 VAL B 88 ALA B 97 1 O TRP B 93 N ILE B 15 SHEET 5 C 5 ARG B 69 TYR B 77 -1 N HIS B 71 O ILE B 94 SHEET 1 D 4 GLY B 43 PHE B 45 0 SHEET 2 D 4 LEU B 9 ASP B 20 -1 N THR B 12 O GLY B 44 SHEET 3 D 4 ASN B 23 ARG B 32 -1 O LYS B 25 N LEU B 18 SHEET 4 D 4 LYS B 108 TYR B 113 -1 O LYS B 111 N LEU B 29 SHEET 1 E 5 LEU C 39 ALA C 40 0 SHEET 2 E 5 ASN C 23 ARG C 32 -1 N ILE C 30 O ALA C 40 SHEET 3 E 5 LEU C 9 ASP C 20 -1 N LEU C 18 O LYS C 25 SHEET 4 E 5 VAL C 88 ALA C 97 1 O TRP C 93 N ILE C 15 SHEET 5 E 5 ARG C 69 TYR C 77 -1 N GLY C 75 O VAL C 92 SHEET 1 F 4 GLY C 43 PHE C 45 0 SHEET 2 F 4 LEU C 9 ASP C 20 -1 N THR C 12 O GLY C 44 SHEET 3 F 4 ASN C 23 ARG C 32 -1 O LYS C 25 N LEU C 18 SHEET 4 F 4 ALA C 107 TYR C 113 -1 O TYR C 113 N ILE C 27 SHEET 1 G 5 GLY D 38 ALA D 40 0 SHEET 2 G 5 ASN D 23 ARG D 32 -1 N ILE D 30 O ALA D 40 SHEET 3 G 5 LEU D 9 ASP D 20 -1 N LEU D 18 O LYS D 25 SHEET 4 G 5 VAL D 88 GLN D 98 1 O TRP D 93 N ILE D 15 SHEET 5 G 5 ARG D 69 TYR D 77 -1 N GLY D 75 O VAL D 92 SHEET 1 H 4 GLY D 43 PHE D 45 0 SHEET 2 H 4 LEU D 9 ASP D 20 -1 N THR D 12 O GLY D 44 SHEET 3 H 4 ASN D 23 ARG D 32 -1 O LYS D 25 N LEU D 18 SHEET 4 H 4 LYS D 108 TYR D 113 -1 O LYS D 111 N LEU D 29 LINK C GLU A 59 N MSE A 60 1555 1555 1.33 LINK C MSE A 60 N ARG A 61 1555 1555 1.33 LINK C LEU A 73 N MSE A 74 1555 1555 1.33 LINK C MSE A 74 N GLY A 75 1555 1555 1.33 LINK C GLU B 59 N MSE B 60 1555 1555 1.33 LINK C MSE B 60 N ARG B 61 1555 1555 1.33 LINK C LEU B 73 N MSE B 74 1555 1555 1.33 LINK C MSE B 74 N GLY B 75 1555 1555 1.33 LINK C GLU C 59 N MSE C 60 1555 1555 1.33 LINK C MSE C 60 N ARG C 61 1555 1555 1.33 LINK C LEU C 73 N MSE C 74 1555 1555 1.33 LINK C MSE C 74 N GLY C 75 1555 1555 1.33 LINK C GLU D 59 N MSE D 60 1555 1555 1.33 LINK C MSE D 60 N ARG D 61 1555 1555 1.33 LINK C LEU D 73 N MSE D 74 1555 1555 1.33 LINK C MSE D 74 N GLY D 75 1555 1555 1.33 CISPEP 1 PRO B 35 PRO B 36 0 0.07 CISPEP 2 PRO C 35 PRO C 36 0 0.05 CISPEP 3 PRO D 35 PRO D 36 0 -0.20 CRYST1 122.020 34.336 130.005 90.00 106.06 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008195 0.000000 0.002359 0.00000 SCALE2 0.000000 0.029124 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008004 0.00000