HEADER STRUCTURAL PROTEIN 04-MAY-07 2YZ8 TITLE CRYSTAL STRUCTURE OF THE 32TH IG-LIKE DOMAIN OF HUMAN OBSCURIN TITLE 2 (KIAA1556) COMPND MOL_ID: 1; COMPND 2 MOLECULE: OBSCURIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: 32TH IG-LIKE DOMAIN; COMPND 5 SYNONYM: OBSCURIN-MYOSIN LIGHT CHAIN KINASE, OBSCURIN-MLCK, OBSCURIN- COMPND 6 RHOGEF; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: OBSCN, KIAA1556; SOURCE 6 EXPRESSION_SYSTEM: CELL-FREE PROTEIN SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PK051017-18 KEYWDS OBSUCURIN, KIAA1556, IG FOLD, STRUCTURAL PROTEIN, STRUCTURAL KEYWDS 2 GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND KEYWDS 3 FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 4 INITIATIVE, RSGI EXPDTA X-RAY DIFFRACTION AUTHOR S.SAIJO,N.OHSAWA,A.NISHINO,S.KISHISHITA,L.CHEN,Z.Q.FU,J.CHRZAS, AUTHOR 2 B.C.WANG,M.SHIROUZU,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 3 INITIATIVE (RSGI) REVDAT 4 03-APR-24 2YZ8 1 SEQADV LINK REVDAT 3 13-JUL-11 2YZ8 1 VERSN REVDAT 2 24-FEB-09 2YZ8 1 VERSN REVDAT 1 06-MAY-08 2YZ8 0 JRNL AUTH S.SAIJO,N.OHSAWA,A.NISHINO,S.KISHISHITA,L.CHEN,Z.Q.FU, JRNL AUTH 2 J.CHRZAS,B.C.WANG,M.SHIROUZU,S.YOKOYAMA JRNL TITL CRYSTAL STRUCTURE OF THE 32TH IG-LIKE DOMAIN OF HUMAN JRNL TITL 2 OBSCURIN (KIAA1556) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 3 NUMBER OF REFLECTIONS : 5904 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 648 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 251 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 53.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.2250 REMARK 3 BIN FREE R VALUE SET COUNT : 28 REMARK 3 BIN FREE R VALUE : 0.2250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 673 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 39 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 6.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.21000 REMARK 3 B22 (A**2) : 0.21000 REMARK 3 B33 (A**2) : -0.43000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.215 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.193 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.130 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.269 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 684 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 930 ; 1.139 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 89 ; 5.832 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 27 ;26.895 ;22.593 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 108 ;13.235 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;18.004 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 110 ; 0.059 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 511 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 226 ; 0.183 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 455 ; 0.293 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 38 ; 0.113 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 37 ; 0.164 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.151 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 455 ; 0.345 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 717 ; 0.659 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 256 ; 1.016 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 213 ; 1.492 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 459 A 466 REMARK 3 ORIGIN FOR THE GROUP (A): 16.7510 16.8970 40.9560 REMARK 3 T TENSOR REMARK 3 T11: 0.1141 T22: 0.1412 REMARK 3 T33: -0.1248 T12: -0.0325 REMARK 3 T13: -0.0386 T23: 0.1747 REMARK 3 L TENSOR REMARK 3 L11: 31.1393 L22: 7.7203 REMARK 3 L33: 18.1151 L12: 12.5841 REMARK 3 L13: -11.8808 L23: 1.1809 REMARK 3 S TENSOR REMARK 3 S11: -0.6834 S12: -0.0438 S13: -0.5867 REMARK 3 S21: -0.2479 S22: 0.2304 S23: -0.3743 REMARK 3 S31: 0.0742 S32: 1.6376 S33: 0.4531 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 467 A 480 REMARK 3 ORIGIN FOR THE GROUP (A): -1.1490 20.6720 47.5310 REMARK 3 T TENSOR REMARK 3 T11: 0.3147 T22: 0.0785 REMARK 3 T33: -0.0013 T12: 0.0180 REMARK 3 T13: 0.0196 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 15.1152 L22: 4.7402 REMARK 3 L33: 8.0447 L12: -8.4455 REMARK 3 L13: -3.0640 L23: 1.3140 REMARK 3 S TENSOR REMARK 3 S11: -0.2104 S12: 0.0842 S13: 0.6414 REMARK 3 S21: 0.0954 S22: 0.1307 S23: -0.1333 REMARK 3 S31: -0.5953 S32: -0.5414 S33: 0.0797 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 481 A 491 REMARK 3 ORIGIN FOR THE GROUP (A): 13.8540 14.6460 34.7610 REMARK 3 T TENSOR REMARK 3 T11: 0.2194 T22: 0.2769 REMARK 3 T33: -0.0079 T12: 0.0252 REMARK 3 T13: -0.0099 T23: 0.0868 REMARK 3 L TENSOR REMARK 3 L11: 4.0489 L22: 8.9418 REMARK 3 L33: 11.6918 L12: 4.1084 REMARK 3 L13: -6.0685 L23: -2.6375 REMARK 3 S TENSOR REMARK 3 S11: -0.0397 S12: 0.1486 S13: -0.3837 REMARK 3 S21: -0.7262 S22: -0.5818 S23: -0.2795 REMARK 3 S31: 0.0193 S32: 0.1612 S33: 0.6215 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 492 A 499 REMARK 3 ORIGIN FOR THE GROUP (A): 3.6230 6.4640 44.1990 REMARK 3 T TENSOR REMARK 3 T11: 0.1215 T22: 0.1366 REMARK 3 T33: -0.1598 T12: -0.0331 REMARK 3 T13: 0.0096 T23: -0.0558 REMARK 3 L TENSOR REMARK 3 L11: 9.9780 L22: 15.8393 REMARK 3 L33: 1.6294 L12: -2.4000 REMARK 3 L13: 3.4524 L23: 1.7457 REMARK 3 S TENSOR REMARK 3 S11: -0.0075 S12: 0.2206 S13: -0.2518 REMARK 3 S21: -0.2392 S22: 0.0006 S23: -0.2635 REMARK 3 S31: 0.5365 S32: -0.3038 S33: 0.0068 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 500 A 512 REMARK 3 ORIGIN FOR THE GROUP (A): 0.5880 13.0280 35.5740 REMARK 3 T TENSOR REMARK 3 T11: 0.1259 T22: 0.1737 REMARK 3 T33: -0.0994 T12: -0.0231 REMARK 3 T13: 0.0104 T23: 0.0236 REMARK 3 L TENSOR REMARK 3 L11: 12.8227 L22: 7.2612 REMARK 3 L33: 7.6667 L12: 6.1438 REMARK 3 L13: -5.2434 L23: -4.3981 REMARK 3 S TENSOR REMARK 3 S11: -0.0561 S12: 0.3487 S13: -0.0558 REMARK 3 S21: -0.1819 S22: 0.1820 S23: 0.3151 REMARK 3 S31: 0.2140 S32: -0.7807 S33: -0.1259 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 513 A 517 REMARK 3 ORIGIN FOR THE GROUP (A): 4.7300 18.0550 37.6110 REMARK 3 T TENSOR REMARK 3 T11: 0.2517 T22: 0.2516 REMARK 3 T33: -0.0949 T12: -0.0423 REMARK 3 T13: 0.0090 T23: -0.0469 REMARK 3 L TENSOR REMARK 3 L11: 77.8035 L22: 4.9309 REMARK 3 L33: 48.9643 L12: 15.1459 REMARK 3 L13: -41.4594 L23: -15.3696 REMARK 3 S TENSOR REMARK 3 S11: 1.2972 S12: 1.2348 S13: 2.1870 REMARK 3 S21: 0.7285 S22: -0.1974 S23: 1.5430 REMARK 3 S31: -1.2012 S32: 0.2781 S33: -1.0997 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 518 A 522 REMARK 3 ORIGIN FOR THE GROUP (A): -7.7690 14.7380 43.9720 REMARK 3 T TENSOR REMARK 3 T11: 0.2041 T22: 0.4992 REMARK 3 T33: 0.0139 T12: -0.1321 REMARK 3 T13: -0.0291 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 42.9259 L22: 5.3730 REMARK 3 L33: 68.2394 L12: 1.1879 REMARK 3 L13: -39.3592 L23: -14.1921 REMARK 3 S TENSOR REMARK 3 S11: -0.0376 S12: 3.2387 S13: 0.0209 REMARK 3 S21: -0.1064 S22: 0.3881 S23: 0.2983 REMARK 3 S31: 0.0842 S32: -4.5244 S33: -0.3505 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 523 A 528 REMARK 3 ORIGIN FOR THE GROUP (A): -2.6790 11.4930 51.5740 REMARK 3 T TENSOR REMARK 3 T11: 0.1558 T22: 0.2073 REMARK 3 T33: -0.1350 T12: -0.0112 REMARK 3 T13: 0.0249 T23: 0.0111 REMARK 3 L TENSOR REMARK 3 L11: 39.7578 L22: 5.1417 REMARK 3 L33: 9.4222 L12: -8.1266 REMARK 3 L13: -1.1978 L23: -0.9129 REMARK 3 S TENSOR REMARK 3 S11: -0.6477 S12: -0.7168 S13: -0.9731 REMARK 3 S21: 0.0485 S22: 0.4950 S23: 0.5093 REMARK 3 S31: 0.3336 S32: -1.1483 S33: 0.1527 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 529 A 542 REMARK 3 ORIGIN FOR THE GROUP (A): 10.8520 11.1380 44.5140 REMARK 3 T TENSOR REMARK 3 T11: 0.1404 T22: 0.1243 REMARK 3 T33: -0.1316 T12: -0.0002 REMARK 3 T13: 0.0046 T23: 0.0650 REMARK 3 L TENSOR REMARK 3 L11: 9.5947 L22: 4.2758 REMARK 3 L33: 6.7725 L12: -0.7842 REMARK 3 L13: -5.8379 L23: 2.2982 REMARK 3 S TENSOR REMARK 3 S11: -0.0713 S12: 0.1381 S13: -0.1271 REMARK 3 S21: -0.0717 S22: -0.1738 S23: -0.4111 REMARK 3 S31: 0.0956 S32: 0.3726 S33: 0.2451 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 543 A 548 REMARK 3 ORIGIN FOR THE GROUP (A): -8.6860 20.9180 54.5110 REMARK 3 T TENSOR REMARK 3 T11: 0.2174 T22: 0.3152 REMARK 3 T33: -0.1131 T12: 0.1193 REMARK 3 T13: 0.0036 T23: 0.0500 REMARK 3 L TENSOR REMARK 3 L11: 31.8458 L22: 13.0007 REMARK 3 L33: 11.9037 L12: -8.3698 REMARK 3 L13: -11.6991 L23: 3.2686 REMARK 3 S TENSOR REMARK 3 S11: 0.4429 S12: 0.7054 S13: 1.2353 REMARK 3 S21: -0.2160 S22: -0.0437 S23: 0.4092 REMARK 3 S31: -0.9280 S32: -1.7458 S33: -0.3992 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURE WAS REFINED ALSO WITH CNS REMARK 3 1.1 REMARK 4 REMARK 4 2YZ8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-JUL-07. REMARK 100 THE DEPOSITION ID IS D_1000027320. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JAN-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97901 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6566 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 14.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 56.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.24700 REMARK 200 FOR SHELL : 4.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: HOMOLOGY-MODEL (SWISS-MODEL) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M POTASSIUM SODIUM TARTRATE REMARK 280 TETRAHYDRATE, 0.1M TRI-SODIUM CITRATE DIHYDRATE PH 5.6, 2M REMARK 280 AMMONIUM SULFATE , VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.15800 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 21.67900 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 21.67900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 76.73700 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 21.67900 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 21.67900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 25.57900 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 21.67900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 21.67900 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 76.73700 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 21.67900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 21.67900 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 25.57900 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 51.15800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 452 REMARK 465 SER A 453 REMARK 465 SER A 454 REMARK 465 GLY A 455 REMARK 465 SER A 456 REMARK 465 SER A 457 REMARK 465 GLY A 458 REMARK 465 SER A 549 REMARK 465 GLY A 550 REMARK 465 PRO A 551 REMARK 465 SER A 552 REMARK 465 SER A 553 REMARK 465 GLY A 554 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 464 CD OE1 OE2 REMARK 470 LYS A 467 CD CE NZ REMARK 470 LYS A 491 CD CE NZ REMARK 470 GLU A 510 CD OE1 OE2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2E7B RELATED DB: PDB REMARK 900 IDENTICAL DOMAIN, SOLVED WITH NMR. REMARK 900 RELATED ID: HSK002001528.15 RELATED DB: TARGETDB DBREF 2YZ8 A 459 548 UNP Q5VST9 OBSCN_HUMAN 3184 3273 SEQADV 2YZ8 GLY A 452 UNP Q5VST9 EXPRESSION TAG SEQADV 2YZ8 SER A 453 UNP Q5VST9 EXPRESSION TAG SEQADV 2YZ8 SER A 454 UNP Q5VST9 EXPRESSION TAG SEQADV 2YZ8 GLY A 455 UNP Q5VST9 EXPRESSION TAG SEQADV 2YZ8 SER A 456 UNP Q5VST9 EXPRESSION TAG SEQADV 2YZ8 SER A 457 UNP Q5VST9 EXPRESSION TAG SEQADV 2YZ8 GLY A 458 UNP Q5VST9 EXPRESSION TAG SEQADV 2YZ8 SER A 549 UNP Q5VST9 EXPRESSION TAG SEQADV 2YZ8 GLY A 550 UNP Q5VST9 EXPRESSION TAG SEQADV 2YZ8 PRO A 551 UNP Q5VST9 EXPRESSION TAG SEQADV 2YZ8 SER A 552 UNP Q5VST9 EXPRESSION TAG SEQADV 2YZ8 SER A 553 UNP Q5VST9 EXPRESSION TAG SEQADV 2YZ8 GLY A 554 UNP Q5VST9 EXPRESSION TAG SEQRES 1 A 103 GLY SER SER GLY SER SER GLY PRO VAL ARG PHE GLN GLU SEQRES 2 A 103 ALA LEU LYS ASP LEU GLU VAL LEU GLU GLY GLY ALA ALA SEQRES 3 A 103 THR LEU ARG CYS VAL LEU SER SER VAL ALA ALA PRO VAL SEQRES 4 A 103 LYS TRP CYS TYR GLY ASN ASN VAL LEU ARG PRO GLY ASP SEQRES 5 A 103 LYS TYR SER LEU ARG GLN GLU GLY ALA MSE LEU GLU LEU SEQRES 6 A 103 VAL VAL ARG ASN LEU ARG PRO GLN ASP SER GLY ARG TYR SEQRES 7 A 103 SER CYS SER PHE GLY ASP GLN THR THR SER ALA THR LEU SEQRES 8 A 103 THR VAL THR ALA LEU PRO SER GLY PRO SER SER GLY MODRES 2YZ8 MSE A 513 MET SELENOMETHIONINE HET MSE A 513 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE C5 H11 N O2 SE FORMUL 2 HOH *39(H2 O) HELIX 1 1 ARG A 522 SER A 526 5 5 SHEET 1 A 4 PHE A 462 GLU A 464 0 SHEET 2 A 4 ALA A 477 LEU A 483 -1 O VAL A 482 N GLU A 464 SHEET 3 A 4 MSE A 513 VAL A 518 -1 O LEU A 514 N CYS A 481 SHEET 4 A 4 TYR A 505 GLU A 510 -1 N ARG A 508 O GLU A 515 SHEET 1 B 5 LEU A 469 LEU A 472 0 SHEET 2 B 5 GLN A 536 THR A 545 1 O THR A 543 N LEU A 469 SHEET 3 B 5 GLY A 527 PHE A 533 -1 N GLY A 527 O LEU A 542 SHEET 4 B 5 LYS A 491 TYR A 494 -1 N CYS A 493 O SER A 530 SHEET 5 B 5 ASN A 497 VAL A 498 -1 O ASN A 497 N TYR A 494 LINK C ALA A 512 N MSE A 513 1555 1555 1.33 LINK C MSE A 513 N LEU A 514 1555 1555 1.33 CISPEP 1 ALA A 488 PRO A 489 0 -3.31 CRYST1 43.358 43.358 102.316 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023064 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023064 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009774 0.00000