HEADER METAL BINDING PROTEIN 06-MAY-07 2Z06 TITLE CRYSTAL STRUCTURE OF UNCHARACTERIZED CONSERVED PROTEIN FROM THERMUS TITLE 2 THERMOPHILUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN TTHA0625; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: UNCHARACTERIZED CONSERVED PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-11A KEYWDS METAL BINDING PROTEIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT KEYWDS 2 ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI EXPDTA X-RAY DIFFRACTION AUTHOR M.KANAGAWA,S.KURAMITSU,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 01-NOV-23 2Z06 1 REMARK REVDAT 3 13-JUL-11 2Z06 1 VERSN REVDAT 2 24-FEB-09 2Z06 1 VERSN REVDAT 1 06-NOV-07 2Z06 0 JRNL AUTH M.KANAGAWA,S.KURAMITSU,S.YOKOYAMA JRNL TITL CRYSTAL STRUCTURE OF UNCHARACTERIZED CONSERVED PROTEIN FROM JRNL TITL 2 THERMUS THERMOPHILUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.20 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 97897.530 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 48990 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 4954 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.34 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 6645 REMARK 3 BIN R VALUE (WORKING SET) : 0.3210 REMARK 3 BIN FREE R VALUE : 0.3200 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 764 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.012 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7908 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 13 REMARK 3 SOLVENT ATOMS : 361 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.60000 REMARK 3 B22 (A**2) : -4.29000 REMARK 3 B33 (A**2) : 10.89000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM SIGMAA (A) : 0.34 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.33 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.020 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.250 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.010 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.940 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.880 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 47.90 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2Z06 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-AUG-07. REMARK 100 THE DEPOSITION ID IS D_1000027354. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : FIXED EXIT SI DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU JUPITER 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50914 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.41900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2CV9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE, 1.3M AMMONIUM H2 REMARK 280 PHOSPHATE, 0.1M LITHIUM SULFATE, 0.01M COBALT CHLORIDE, PH 5.2, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.30100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.13650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.46400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.13650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.30100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.46400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10740 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET D 1 CA - C - N ANGL. DEV. = -15.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 8 116.68 -32.90 REMARK 500 ALA A 11 -154.31 51.62 REMARK 500 LEU A 63 -118.77 -114.55 REMARK 500 HIS A 170 -30.95 96.09 REMARK 500 LEU A 176 70.71 -103.64 REMARK 500 ASP A 177 27.08 -145.78 REMARK 500 SER A 199 -170.35 -170.47 REMARK 500 ASP B 8 116.64 -32.87 REMARK 500 ALA B 11 -154.32 51.59 REMARK 500 LEU B 63 -118.92 -110.85 REMARK 500 ALA B 67 -11.73 -49.06 REMARK 500 GLU B 72 -24.51 -38.78 REMARK 500 ASN B 87 32.61 -94.62 REMARK 500 HIS B 170 -43.71 96.73 REMARK 500 HIS B 172 -1.78 70.25 REMARK 500 LEU B 176 54.62 -95.25 REMARK 500 SER B 199 -168.82 -179.57 REMARK 500 ASP C 8 108.13 -29.32 REMARK 500 ALA C 11 -158.36 39.19 REMARK 500 LEU C 63 -123.49 -115.62 REMARK 500 HIS C 170 -25.65 94.26 REMARK 500 ASP C 177 23.25 -145.31 REMARK 500 PRO C 182 -38.29 -39.31 REMARK 500 ASP D 8 116.65 -32.86 REMARK 500 ALA D 11 -154.29 51.66 REMARK 500 LEU D 63 -117.97 -117.92 REMARK 500 SER D 79 -8.93 -160.60 REMARK 500 ASP D 123 109.44 -59.33 REMARK 500 LEU D 132 -8.12 -56.06 REMARK 500 HIS D 170 -25.75 97.16 REMARK 500 LEU D 176 65.45 -104.89 REMARK 500 ASP D 177 28.96 -141.69 REMARK 500 SER D 199 -174.39 -175.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 2 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASN B 87 -10.51 REMARK 500 MET D 1 13.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B 253 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 37 OE2 REMARK 620 2 ASN B 65 OD1 97.8 REMARK 620 3 HIS B 170 ND1 157.3 94.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO C 336 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 8 OD1 REMARK 620 2 ASP C 8 OD2 55.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO C 253 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN C 65 OD1 REMARK 620 2 HIS C 170 ND1 118.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO D 297 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 37 OE2 REMARK 620 2 HIS D 170 ND1 156.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 253 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO C 253 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 253 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO D 253 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO C 254 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 254 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO D 254 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 254 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO D 297 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 315 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO C 336 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: TTK003001657.3 RELATED DB: TARGETDB DBREF 2Z06 A 1 252 UNP Q5SKL8 Q5SKL8_THET8 1 252 DBREF 2Z06 B 1 252 UNP Q5SKL8 Q5SKL8_THET8 1 252 DBREF 2Z06 C 1 252 UNP Q5SKL8 Q5SKL8_THET8 1 252 DBREF 2Z06 D 1 252 UNP Q5SKL8 Q5SKL8_THET8 1 252 SEQRES 1 A 252 MET ARG VAL LEU PHE ILE GLY ASP VAL MET ALA GLU PRO SEQRES 2 A 252 GLY LEU ARG ALA VAL GLY LEU HIS LEU PRO ASP ILE ARG SEQRES 3 A 252 ASP ARG TYR ASP LEU VAL ILE ALA ASN GLY GLU ASN ALA SEQRES 4 A 252 ALA ARG GLY LYS GLY LEU ASP ARG ARG SER TYR ARG LEU SEQRES 5 A 252 LEU ARG GLU ALA GLY VAL ASP LEU VAL SER LEU GLY ASN SEQRES 6 A 252 HIS ALA TRP ASP HIS LYS GLU VAL TYR ALA LEU LEU GLU SEQRES 7 A 252 SER GLU PRO VAL VAL ARG PRO LEU ASN TYR PRO PRO GLY SEQRES 8 A 252 THR PRO GLY LYS GLY PHE TRP ARG LEU GLU VAL GLY GLY SEQRES 9 A 252 GLU SER LEU LEU PHE VAL GLN VAL MET GLY ARG ILE PHE SEQRES 10 A 252 MET ASP PRO LEU ASP ASP PRO PHE ARG ALA LEU ASP ARG SEQRES 11 A 252 LEU LEU GLU GLU GLU LYS ALA ASP TYR VAL LEU VAL GLU SEQRES 12 A 252 VAL HIS ALA GLU ALA THR SER GLU LYS MET ALA LEU ALA SEQRES 13 A 252 HIS TYR LEU ASP GLY ARG ALA SER ALA VAL LEU GLY THR SEQRES 14 A 252 HIS THR HIS VAL PRO THR LEU ASP ALA THR ARG LEU PRO SEQRES 15 A 252 LYS GLY THR LEU TYR GLN THR ASP VAL GLY MET THR GLY SEQRES 16 A 252 THR TYR HIS SER ILE ILE GLY GLY GLU VAL GLU THR PHE SEQRES 17 A 252 LEU ALA ARG PHE LEU THR GLY ARG PRO GLN PRO PHE ARG SEQRES 18 A 252 ALA ALA GLN GLY LYS ALA ARG PHE HIS ALA THR GLU LEU SEQRES 19 A 252 VAL PHE GLU GLY GLY ARG PRO VAL ALA ILE SER PRO TYR SEQRES 20 A 252 VAL TRP GLU GLU PRO SEQRES 1 B 252 MET ARG VAL LEU PHE ILE GLY ASP VAL MET ALA GLU PRO SEQRES 2 B 252 GLY LEU ARG ALA VAL GLY LEU HIS LEU PRO ASP ILE ARG SEQRES 3 B 252 ASP ARG TYR ASP LEU VAL ILE ALA ASN GLY GLU ASN ALA SEQRES 4 B 252 ALA ARG GLY LYS GLY LEU ASP ARG ARG SER TYR ARG LEU SEQRES 5 B 252 LEU ARG GLU ALA GLY VAL ASP LEU VAL SER LEU GLY ASN SEQRES 6 B 252 HIS ALA TRP ASP HIS LYS GLU VAL TYR ALA LEU LEU GLU SEQRES 7 B 252 SER GLU PRO VAL VAL ARG PRO LEU ASN TYR PRO PRO GLY SEQRES 8 B 252 THR PRO GLY LYS GLY PHE TRP ARG LEU GLU VAL GLY GLY SEQRES 9 B 252 GLU SER LEU LEU PHE VAL GLN VAL MET GLY ARG ILE PHE SEQRES 10 B 252 MET ASP PRO LEU ASP ASP PRO PHE ARG ALA LEU ASP ARG SEQRES 11 B 252 LEU LEU GLU GLU GLU LYS ALA ASP TYR VAL LEU VAL GLU SEQRES 12 B 252 VAL HIS ALA GLU ALA THR SER GLU LYS MET ALA LEU ALA SEQRES 13 B 252 HIS TYR LEU ASP GLY ARG ALA SER ALA VAL LEU GLY THR SEQRES 14 B 252 HIS THR HIS VAL PRO THR LEU ASP ALA THR ARG LEU PRO SEQRES 15 B 252 LYS GLY THR LEU TYR GLN THR ASP VAL GLY MET THR GLY SEQRES 16 B 252 THR TYR HIS SER ILE ILE GLY GLY GLU VAL GLU THR PHE SEQRES 17 B 252 LEU ALA ARG PHE LEU THR GLY ARG PRO GLN PRO PHE ARG SEQRES 18 B 252 ALA ALA GLN GLY LYS ALA ARG PHE HIS ALA THR GLU LEU SEQRES 19 B 252 VAL PHE GLU GLY GLY ARG PRO VAL ALA ILE SER PRO TYR SEQRES 20 B 252 VAL TRP GLU GLU PRO SEQRES 1 C 252 MET ARG VAL LEU PHE ILE GLY ASP VAL MET ALA GLU PRO SEQRES 2 C 252 GLY LEU ARG ALA VAL GLY LEU HIS LEU PRO ASP ILE ARG SEQRES 3 C 252 ASP ARG TYR ASP LEU VAL ILE ALA ASN GLY GLU ASN ALA SEQRES 4 C 252 ALA ARG GLY LYS GLY LEU ASP ARG ARG SER TYR ARG LEU SEQRES 5 C 252 LEU ARG GLU ALA GLY VAL ASP LEU VAL SER LEU GLY ASN SEQRES 6 C 252 HIS ALA TRP ASP HIS LYS GLU VAL TYR ALA LEU LEU GLU SEQRES 7 C 252 SER GLU PRO VAL VAL ARG PRO LEU ASN TYR PRO PRO GLY SEQRES 8 C 252 THR PRO GLY LYS GLY PHE TRP ARG LEU GLU VAL GLY GLY SEQRES 9 C 252 GLU SER LEU LEU PHE VAL GLN VAL MET GLY ARG ILE PHE SEQRES 10 C 252 MET ASP PRO LEU ASP ASP PRO PHE ARG ALA LEU ASP ARG SEQRES 11 C 252 LEU LEU GLU GLU GLU LYS ALA ASP TYR VAL LEU VAL GLU SEQRES 12 C 252 VAL HIS ALA GLU ALA THR SER GLU LYS MET ALA LEU ALA SEQRES 13 C 252 HIS TYR LEU ASP GLY ARG ALA SER ALA VAL LEU GLY THR SEQRES 14 C 252 HIS THR HIS VAL PRO THR LEU ASP ALA THR ARG LEU PRO SEQRES 15 C 252 LYS GLY THR LEU TYR GLN THR ASP VAL GLY MET THR GLY SEQRES 16 C 252 THR TYR HIS SER ILE ILE GLY GLY GLU VAL GLU THR PHE SEQRES 17 C 252 LEU ALA ARG PHE LEU THR GLY ARG PRO GLN PRO PHE ARG SEQRES 18 C 252 ALA ALA GLN GLY LYS ALA ARG PHE HIS ALA THR GLU LEU SEQRES 19 C 252 VAL PHE GLU GLY GLY ARG PRO VAL ALA ILE SER PRO TYR SEQRES 20 C 252 VAL TRP GLU GLU PRO SEQRES 1 D 252 MET ARG VAL LEU PHE ILE GLY ASP VAL MET ALA GLU PRO SEQRES 2 D 252 GLY LEU ARG ALA VAL GLY LEU HIS LEU PRO ASP ILE ARG SEQRES 3 D 252 ASP ARG TYR ASP LEU VAL ILE ALA ASN GLY GLU ASN ALA SEQRES 4 D 252 ALA ARG GLY LYS GLY LEU ASP ARG ARG SER TYR ARG LEU SEQRES 5 D 252 LEU ARG GLU ALA GLY VAL ASP LEU VAL SER LEU GLY ASN SEQRES 6 D 252 HIS ALA TRP ASP HIS LYS GLU VAL TYR ALA LEU LEU GLU SEQRES 7 D 252 SER GLU PRO VAL VAL ARG PRO LEU ASN TYR PRO PRO GLY SEQRES 8 D 252 THR PRO GLY LYS GLY PHE TRP ARG LEU GLU VAL GLY GLY SEQRES 9 D 252 GLU SER LEU LEU PHE VAL GLN VAL MET GLY ARG ILE PHE SEQRES 10 D 252 MET ASP PRO LEU ASP ASP PRO PHE ARG ALA LEU ASP ARG SEQRES 11 D 252 LEU LEU GLU GLU GLU LYS ALA ASP TYR VAL LEU VAL GLU SEQRES 12 D 252 VAL HIS ALA GLU ALA THR SER GLU LYS MET ALA LEU ALA SEQRES 13 D 252 HIS TYR LEU ASP GLY ARG ALA SER ALA VAL LEU GLY THR SEQRES 14 D 252 HIS THR HIS VAL PRO THR LEU ASP ALA THR ARG LEU PRO SEQRES 15 D 252 LYS GLY THR LEU TYR GLN THR ASP VAL GLY MET THR GLY SEQRES 16 D 252 THR TYR HIS SER ILE ILE GLY GLY GLU VAL GLU THR PHE SEQRES 17 D 252 LEU ALA ARG PHE LEU THR GLY ARG PRO GLN PRO PHE ARG SEQRES 18 D 252 ALA ALA GLN GLY LYS ALA ARG PHE HIS ALA THR GLU LEU SEQRES 19 D 252 VAL PHE GLU GLY GLY ARG PRO VAL ALA ILE SER PRO TYR SEQRES 20 D 252 VAL TRP GLU GLU PRO HET CO A 253 1 HET CO A 254 1 HET CO A 307 1 HET CO B 253 1 HET CO B 254 1 HET CO B 310 1 HET CO B 315 1 HET CO C 253 1 HET CO C 254 1 HET CO C 336 1 HET CO D 253 1 HET CO D 254 1 HET CO D 297 1 HETNAM CO COBALT (II) ION FORMUL 5 CO 13(CO 2+) FORMUL 18 HOH *361(H2 O) HELIX 1 1 MET A 10 ARG A 26 1 17 HELIX 2 2 ASP A 27 TYR A 29 5 3 HELIX 3 3 ASP A 46 GLY A 57 1 12 HELIX 4 4 GLU A 72 GLU A 80 1 9 HELIX 5 5 ASP A 123 GLU A 135 1 13 HELIX 6 6 ALA A 148 ASP A 160 1 13 HELIX 7 7 GLU A 204 GLY A 215 1 12 HELIX 8 8 MET B 10 ARG B 26 1 17 HELIX 9 9 ASP B 27 TYR B 29 5 3 HELIX 10 10 ASP B 46 ALA B 56 1 11 HELIX 11 11 GLU B 72 GLU B 80 1 9 HELIX 12 12 ASP B 123 GLU B 135 1 13 HELIX 13 13 ALA B 148 LEU B 159 1 12 HELIX 14 14 GLU B 204 GLY B 215 1 12 HELIX 15 15 MET C 10 ARG C 26 1 17 HELIX 16 16 ASP C 27 TYR C 29 5 3 HELIX 17 17 ASP C 46 ALA C 56 1 11 HELIX 18 18 LYS C 71 GLU C 80 1 10 HELIX 19 19 ASP C 123 GLU C 135 1 13 HELIX 20 20 ALA C 148 ASP C 160 1 13 HELIX 21 21 GLU C 204 GLY C 215 1 12 HELIX 22 22 MET D 10 ARG D 26 1 17 HELIX 23 23 ASP D 27 TYR D 29 5 3 HELIX 24 24 ASP D 46 GLY D 57 1 12 HELIX 25 25 GLY D 64 LYS D 71 5 8 HELIX 26 26 GLU D 72 GLU D 78 1 7 HELIX 27 27 ASP D 123 GLU D 134 1 12 HELIX 28 28 ALA D 148 ASP D 160 1 13 HELIX 29 29 GLU D 204 GLY D 215 1 12 SHEET 1 A 6 VAL A 82 VAL A 83 0 SHEET 2 A 6 LEU A 60 SER A 62 1 N VAL A 61 O VAL A 83 SHEET 3 A 6 LEU A 31 ASN A 35 1 N ALA A 34 O LEU A 60 SHEET 4 A 6 ARG A 2 ILE A 6 1 N ILE A 6 O ILE A 33 SHEET 5 A 6 ALA A 227 GLU A 237 -1 O LEU A 234 N VAL A 3 SHEET 6 A 6 GLY A 195 THR A 196 -1 N GLY A 195 O ARG A 228 SHEET 1 B 6 VAL A 82 VAL A 83 0 SHEET 2 B 6 LEU A 60 SER A 62 1 N VAL A 61 O VAL A 83 SHEET 3 B 6 LEU A 31 ASN A 35 1 N ALA A 34 O LEU A 60 SHEET 4 B 6 ARG A 2 ILE A 6 1 N ILE A 6 O ILE A 33 SHEET 5 B 6 ALA A 227 GLU A 237 -1 O LEU A 234 N VAL A 3 SHEET 6 B 6 ARG A 240 GLU A 250 -1 O TYR A 247 N ALA A 231 SHEET 1 C 6 PHE A 97 VAL A 102 0 SHEET 2 C 6 GLU A 105 MET A 113 -1 O PHE A 109 N TRP A 98 SHEET 3 C 6 TYR A 139 HIS A 145 1 O TYR A 139 N LEU A 108 SHEET 4 C 6 ALA A 165 THR A 169 1 O LEU A 167 N VAL A 144 SHEET 5 C 6 LEU A 186 GLN A 188 1 O LEU A 186 N VAL A 166 SHEET 6 C 6 THR A 179 ARG A 180 -1 N THR A 179 O TYR A 187 SHEET 1 D 7 ASP B 8 VAL B 9 0 SHEET 2 D 7 MET B 193 THR B 196 1 O THR B 194 N ASP B 8 SHEET 3 D 7 ALA B 227 GLU B 237 -1 O ARG B 228 N GLY B 195 SHEET 4 D 7 ARG B 2 ILE B 6 -1 N PHE B 5 O THR B 232 SHEET 5 D 7 LEU B 31 ASN B 35 1 O LEU B 31 N LEU B 4 SHEET 6 D 7 LEU B 60 SER B 62 1 O LEU B 60 N ALA B 34 SHEET 7 D 7 VAL B 82 VAL B 83 1 O VAL B 83 N VAL B 61 SHEET 1 E 4 ASP B 8 VAL B 9 0 SHEET 2 E 4 MET B 193 THR B 196 1 O THR B 194 N ASP B 8 SHEET 3 E 4 ALA B 227 GLU B 237 -1 O ARG B 228 N GLY B 195 SHEET 4 E 4 ARG B 240 GLU B 250 -1 O TYR B 247 N ALA B 231 SHEET 1 F 6 PHE B 97 VAL B 102 0 SHEET 2 F 6 GLU B 105 MET B 113 -1 O PHE B 109 N TRP B 98 SHEET 3 F 6 TYR B 139 HIS B 145 1 O TYR B 139 N LEU B 108 SHEET 4 F 6 ALA B 165 THR B 169 1 O ALA B 165 N VAL B 142 SHEET 5 F 6 LEU B 186 GLN B 188 1 O LEU B 186 N VAL B 166 SHEET 6 F 6 THR B 179 ARG B 180 -1 N THR B 179 O TYR B 187 SHEET 1 G 6 VAL C 82 VAL C 83 0 SHEET 2 G 6 LEU C 60 SER C 62 1 N VAL C 61 O VAL C 83 SHEET 3 G 6 LEU C 31 ASN C 35 1 N ALA C 34 O SER C 62 SHEET 4 G 6 ARG C 2 ILE C 6 1 N ILE C 6 O ILE C 33 SHEET 5 G 6 ALA C 227 GLU C 237 -1 O LEU C 234 N VAL C 3 SHEET 6 G 6 GLY C 195 THR C 196 -1 N GLY C 195 O ARG C 228 SHEET 1 H 6 VAL C 82 VAL C 83 0 SHEET 2 H 6 LEU C 60 SER C 62 1 N VAL C 61 O VAL C 83 SHEET 3 H 6 LEU C 31 ASN C 35 1 N ALA C 34 O SER C 62 SHEET 4 H 6 ARG C 2 ILE C 6 1 N ILE C 6 O ILE C 33 SHEET 5 H 6 ALA C 227 GLU C 237 -1 O LEU C 234 N VAL C 3 SHEET 6 H 6 ARG C 240 GLU C 250 -1 O VAL C 242 N VAL C 235 SHEET 1 I 6 PHE C 97 VAL C 102 0 SHEET 2 I 6 GLU C 105 MET C 113 -1 O LEU C 107 N LEU C 100 SHEET 3 I 6 TYR C 139 HIS C 145 1 O GLU C 143 N VAL C 110 SHEET 4 I 6 ALA C 165 THR C 169 1 O ALA C 165 N VAL C 142 SHEET 5 I 6 LEU C 186 GLN C 188 1 O LEU C 186 N VAL C 166 SHEET 6 I 6 THR C 179 ARG C 180 -1 N THR C 179 O TYR C 187 SHEET 1 J 7 ASP D 8 VAL D 9 0 SHEET 2 J 7 MET D 193 THR D 196 1 O THR D 194 N ASP D 8 SHEET 3 J 7 ALA D 227 GLU D 237 -1 O ARG D 228 N GLY D 195 SHEET 4 J 7 ARG D 2 ILE D 6 -1 N VAL D 3 O LEU D 234 SHEET 5 J 7 LEU D 31 ASN D 35 1 O LEU D 31 N LEU D 4 SHEET 6 J 7 LEU D 60 SER D 62 1 O SER D 62 N ALA D 34 SHEET 7 J 7 VAL D 82 VAL D 83 1 O VAL D 83 N VAL D 61 SHEET 1 K 4 ASP D 8 VAL D 9 0 SHEET 2 K 4 MET D 193 THR D 196 1 O THR D 194 N ASP D 8 SHEET 3 K 4 ALA D 227 GLU D 237 -1 O ARG D 228 N GLY D 195 SHEET 4 K 4 ARG D 240 GLU D 250 -1 O TYR D 247 N ALA D 231 SHEET 1 L 6 PHE D 97 VAL D 102 0 SHEET 2 L 6 GLU D 105 MET D 113 -1 O LEU D 107 N LEU D 100 SHEET 3 L 6 TYR D 139 HIS D 145 1 O GLU D 143 N VAL D 110 SHEET 4 L 6 ALA D 165 THR D 169 1 O LEU D 167 N VAL D 144 SHEET 5 L 6 LEU D 186 GLN D 188 1 O LEU D 186 N VAL D 166 SHEET 6 L 6 THR D 179 ARG D 180 -1 N THR D 179 O TYR D 187 LINK ND2 ASN A 65 CO CO A 253 1555 1555 2.54 LINK OE2 GLU B 37 CO CO B 253 1555 1555 2.55 LINK OD1 ASN B 65 CO CO B 253 1555 1555 2.58 LINK ND1 HIS B 170 CO CO B 253 1555 1555 2.43 LINK OD1 ASP C 8 CO CO C 336 1555 1555 2.42 LINK OD2 ASP C 8 CO CO C 336 1555 1555 2.30 LINK OD1 ASN C 65 CO CO C 253 1555 1555 2.49 LINK ND1 HIS C 170 CO CO C 253 1555 1555 2.48 LINK OE2 GLU D 37 CO CO D 297 1555 1555 2.46 LINK ND1 HIS D 170 CO CO D 297 1555 1555 2.39 SITE 1 AC1 5 GLU A 37 ASN A 65 HIS A 145 HIS A 170 SITE 2 AC1 5 HOH A 317 SITE 1 AC2 5 GLU C 37 ASN C 65 HIS C 145 HIS C 170 SITE 2 AC2 5 HOH C 387 SITE 1 AC3 5 GLU B 37 ASN B 65 HIS B 145 HIS B 170 SITE 2 AC3 5 HOH B 335 SITE 1 AC4 2 HIS D 157 ASP D 160 SITE 1 AC5 2 ASP C 160 LYS C 183 SITE 1 AC6 4 ARG A 28 TYR A 247 ARG B 51 GLU B 55 SITE 1 AC7 2 ARG D 28 TYR D 247 SITE 1 AC8 2 ARG B 28 TYR B 247 SITE 1 AC9 5 GLU D 37 ASN D 65 HIS D 145 HIS D 170 SITE 2 AC9 5 HOH D 373 SITE 1 BC1 2 HIS A 157 ASP A 160 SITE 1 BC2 1 ASP B 160 SITE 1 BC3 4 ASP B 8 HIS B 170 HIS B 172 ASP B 190 SITE 1 BC4 4 ASP C 8 HIS C 170 HIS C 172 ASP C 190 CRYST1 76.602 110.928 116.273 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013054 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009015 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008600 0.00000