data_2Z0K # _entry.id 2Z0K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2Z0K pdb_00002z0k 10.2210/pdb2z0k/pdb RCSB RCSB027368 ? ? WWPDB D_1000027368 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id ttk003001048.4 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2Z0K _pdbx_database_status.recvd_initial_deposition_date 2007-05-07 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Murayama, K.' 1 'Kato-Murayama, M.' 2 'Terada, T.' 3 'Kuramitsu, S.' 4 'Shirouzu, M.' 5 'Yokoyama, S.' 6 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 7 # _citation.id primary _citation.title 'Crystal structure of ProX-AlaSA complex from T. thermophilus' _citation.journal_abbrev 'to be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Murayama, K.' 1 ? primary 'Kato-Murayama, M.' 2 ? primary 'Terada, T.' 3 ? primary 'Kuramitsu, S.' 4 ? primary 'Shirouzu, M.' 5 ? primary 'Yokoyama, S.' 6 ? # _cell.entry_id 2Z0K _cell.length_a 31.426 _cell.length_b 50.522 _cell.length_c 81.281 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2Z0K _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative uncharacterized protein TTHA1699' 16575.008 1 ? ? ? ? 2 non-polymer syn "'5'-O-(N-(L-ALANYL)-SULFAMOYL)ADENOSINE" 417.398 1 ? ? ? ? 3 water nat water 18.015 131 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'A putative trans-editing enzyme for prolyl-tRNA-synthetase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSLSPSARRVQGALETRGFGHLKVVELPASTRTAKEAAQAVGAEVGQIVKSLVFVGEKGAYLFLVSGKNRLDLGKATRLV GGPLRQATPEEVRELTGFAIGGVPPVGHNTPLPAYLDEDLLGYPEVWAAGGTPRALFRATPKELLALTGAQVADLKEG ; _entity_poly.pdbx_seq_one_letter_code_can ;MSLSPSARRVQGALETRGFGHLKVVELPASTRTAKEAAQAVGAEVGQIVKSLVFVGEKGAYLFLVSGKNRLDLGKATRLV GGPLRQATPEEVRELTGFAIGGVPPVGHNTPLPAYLDEDLLGYPEVWAAGGTPRALFRATPKELLALTGAQVADLKEG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ttk003001048.4 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 LEU n 1 4 SER n 1 5 PRO n 1 6 SER n 1 7 ALA n 1 8 ARG n 1 9 ARG n 1 10 VAL n 1 11 GLN n 1 12 GLY n 1 13 ALA n 1 14 LEU n 1 15 GLU n 1 16 THR n 1 17 ARG n 1 18 GLY n 1 19 PHE n 1 20 GLY n 1 21 HIS n 1 22 LEU n 1 23 LYS n 1 24 VAL n 1 25 VAL n 1 26 GLU n 1 27 LEU n 1 28 PRO n 1 29 ALA n 1 30 SER n 1 31 THR n 1 32 ARG n 1 33 THR n 1 34 ALA n 1 35 LYS n 1 36 GLU n 1 37 ALA n 1 38 ALA n 1 39 GLN n 1 40 ALA n 1 41 VAL n 1 42 GLY n 1 43 ALA n 1 44 GLU n 1 45 VAL n 1 46 GLY n 1 47 GLN n 1 48 ILE n 1 49 VAL n 1 50 LYS n 1 51 SER n 1 52 LEU n 1 53 VAL n 1 54 PHE n 1 55 VAL n 1 56 GLY n 1 57 GLU n 1 58 LYS n 1 59 GLY n 1 60 ALA n 1 61 TYR n 1 62 LEU n 1 63 PHE n 1 64 LEU n 1 65 VAL n 1 66 SER n 1 67 GLY n 1 68 LYS n 1 69 ASN n 1 70 ARG n 1 71 LEU n 1 72 ASP n 1 73 LEU n 1 74 GLY n 1 75 LYS n 1 76 ALA n 1 77 THR n 1 78 ARG n 1 79 LEU n 1 80 VAL n 1 81 GLY n 1 82 GLY n 1 83 PRO n 1 84 LEU n 1 85 ARG n 1 86 GLN n 1 87 ALA n 1 88 THR n 1 89 PRO n 1 90 GLU n 1 91 GLU n 1 92 VAL n 1 93 ARG n 1 94 GLU n 1 95 LEU n 1 96 THR n 1 97 GLY n 1 98 PHE n 1 99 ALA n 1 100 ILE n 1 101 GLY n 1 102 GLY n 1 103 VAL n 1 104 PRO n 1 105 PRO n 1 106 VAL n 1 107 GLY n 1 108 HIS n 1 109 ASN n 1 110 THR n 1 111 PRO n 1 112 LEU n 1 113 PRO n 1 114 ALA n 1 115 TYR n 1 116 LEU n 1 117 ASP n 1 118 GLU n 1 119 ASP n 1 120 LEU n 1 121 LEU n 1 122 GLY n 1 123 TYR n 1 124 PRO n 1 125 GLU n 1 126 VAL n 1 127 TRP n 1 128 ALA n 1 129 ALA n 1 130 GLY n 1 131 GLY n 1 132 THR n 1 133 PRO n 1 134 ARG n 1 135 ALA n 1 136 LEU n 1 137 PHE n 1 138 ARG n 1 139 ALA n 1 140 THR n 1 141 PRO n 1 142 LYS n 1 143 GLU n 1 144 LEU n 1 145 LEU n 1 146 ALA n 1 147 LEU n 1 148 THR n 1 149 GLY n 1 150 ALA n 1 151 GLN n 1 152 VAL n 1 153 ALA n 1 154 ASP n 1 155 LEU n 1 156 LYS n 1 157 GLU n 1 158 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species 'Thermus thermophilus' _entity_src_gen.gene_src_strain HB8 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermus thermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 300852 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5SHN1_THET8 _struct_ref.pdbx_db_accession Q5SHN1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSLSPSARRVQGALETRGFGHLKVVELPASTRTAKEAAQAVGAEVGQIVKSLVFVGEKGAYLFLVSGKNRLDLGKATRLV GGPLRQATPEEVRELTGFAIGGVPPVGHNTPLPAYLDEDLLGYPEVWAAGGTPRALFRATPKELLALTGAQVADLKEG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2Z0K _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 158 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5SHN1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 158 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 158 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A5A non-polymer . "'5'-O-(N-(L-ALANYL)-SULFAMOYL)ADENOSINE" ? 'C13 H19 N7 O7 S' 417.398 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2Z0K _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.95 _exptl_crystal.density_percent_sol 36.81 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '30% PEG3350, 0.1M Hepes, 30mM AlaSA, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2005-06-13 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E+ SUPERBRIGHT' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 2Z0K _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F -3.0 _reflns.d_resolution_low 43.03 _reflns.d_resolution_high 2.19 _reflns.number_obs 6636 _reflns.number_all ? _reflns.percent_possible_obs 93.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.050 _reflns.pdbx_netI_over_sigmaI 32.3 _reflns.B_iso_Wilson_estimate 12.8 _reflns.pdbx_redundancy 6.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 77.5 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.133 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2Z0K _refine.ls_number_reflns_obs 6587 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1037818.30 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 31.67 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 94.2 _refine.ls_R_factor_obs 0.179 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.179 _refine.ls_R_factor_R_free 0.254 _refine.ls_R_factor_R_free_error 0.009 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.9 _refine.ls_number_reflns_R_free 721 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 19.3 _refine.aniso_B[1][1] -3.17 _refine.aniso_B[2][2] -4.40 _refine.aniso_B[3][3] 7.57 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.316586 _refine.solvent_model_param_bsol 40.8232 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 2CX5' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2Z0K _refine_analyze.Luzzati_coordinate_error_obs 0.21 _refine_analyze.Luzzati_sigma_a_obs 0.10 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.30 _refine_analyze.Luzzati_sigma_a_free 0.20 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1155 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 131 _refine_hist.number_atoms_total 1314 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 31.67 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.86 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.22 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.82 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.95 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.70 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.34 _refine_ls_shell.number_reflns_R_work 884 _refine_ls_shell.R_factor_R_work 0.172 _refine_ls_shell.percent_reflns_obs 86.7 _refine_ls_shell.R_factor_R_free 0.259 _refine_ls_shell.R_factor_R_free_error 0.027 _refine_ls_shell.percent_reflns_R_free 9.1 _refine_ls_shell.number_reflns_R_free 89 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 alasa2.param alasa2.top 'X-RAY DIFFRACTION' 3 water_rep.param water_rep.top 'X-RAY DIFFRACTION' # _struct.entry_id 2Z0K _struct.title 'Crystal structure of ProX-AlaSA complex from T. thermophilus' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2Z0K _struct_keywords.pdbx_keywords TRANSLATION _struct_keywords.text ;Protein-AlaSA complex, trans-editing domain, prolyl-tRNA synthetase, TRANSLATION, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 4 ? GLY A 18 ? SER A 4 GLY A 18 1 ? 15 HELX_P HELX_P2 2 THR A 33 ? GLY A 42 ? THR A 33 GLY A 42 1 ? 10 HELX_P HELX_P3 3 GLU A 44 ? GLY A 46 ? GLU A 44 GLY A 46 5 ? 3 HELX_P HELX_P4 4 ASP A 72 ? GLY A 81 ? ASP A 72 GLY A 81 1 ? 10 HELX_P HELX_P5 5 THR A 88 ? GLY A 97 ? THR A 88 GLY A 97 1 ? 10 HELX_P HELX_P6 6 ASP A 119 ? TYR A 123 ? ASP A 119 TYR A 123 5 ? 5 HELX_P HELX_P7 7 THR A 140 ? GLY A 149 ? THR A 140 GLY A 149 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 24 ? GLU A 26 ? VAL A 24 GLU A 26 A 2 ALA A 135 ? ALA A 139 ? ALA A 135 ALA A 139 A 3 VAL A 126 ? ALA A 129 ? VAL A 126 ALA A 129 A 4 ILE A 48 ? GLY A 56 ? ILE A 48 GLY A 56 A 5 LEU A 84 ? GLN A 86 ? LEU A 84 GLN A 86 B 1 VAL A 24 ? GLU A 26 ? VAL A 24 GLU A 26 B 2 ALA A 135 ? ALA A 139 ? ALA A 135 ALA A 139 B 3 VAL A 126 ? ALA A 129 ? VAL A 126 ALA A 129 B 4 ILE A 48 ? GLY A 56 ? ILE A 48 GLY A 56 B 5 ALA A 60 ? SER A 66 ? ALA A 60 SER A 66 B 6 ALA A 114 ? ASP A 117 ? ALA A 114 ASP A 117 B 7 GLN A 151 ? ALA A 153 ? GLN A 151 ALA A 153 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 25 ? N VAL A 25 O LEU A 136 ? O LEU A 136 A 2 3 O ALA A 139 ? O ALA A 139 N VAL A 126 ? N VAL A 126 A 3 4 O TRP A 127 ? O TRP A 127 N VAL A 49 ? N VAL A 49 A 4 5 N VAL A 55 ? N VAL A 55 O ARG A 85 ? O ARG A 85 B 1 2 N VAL A 25 ? N VAL A 25 O LEU A 136 ? O LEU A 136 B 2 3 O ALA A 139 ? O ALA A 139 N VAL A 126 ? N VAL A 126 B 3 4 O TRP A 127 ? O TRP A 127 N VAL A 49 ? N VAL A 49 B 4 5 N LEU A 52 ? N LEU A 52 O PHE A 63 ? O PHE A 63 B 5 6 N LEU A 64 ? N LEU A 64 O ASP A 117 ? O ASP A 117 B 6 7 N LEU A 116 ? N LEU A 116 O ALA A 153 ? O ALA A 153 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id A5A _struct_site.pdbx_auth_seq_id 600 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 18 _struct_site.details 'BINDING SITE FOR RESIDUE A5A A 600' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 18 THR A 31 ? THR A 31 . ? 1_555 ? 2 AC1 18 ARG A 32 ? ARG A 32 . ? 1_555 ? 3 AC1 18 LYS A 50 ? LYS A 50 . ? 1_555 ? 4 AC1 18 LEU A 52 ? LEU A 52 . ? 1_555 ? 5 AC1 18 ARG A 78 ? ARG A 78 . ? 1_455 ? 6 AC1 18 GLN A 86 ? GLN A 86 . ? 1_555 ? 7 AC1 18 ALA A 87 ? ALA A 87 . ? 1_555 ? 8 AC1 18 PRO A 89 ? PRO A 89 . ? 1_555 ? 9 AC1 18 GLY A 101 ? GLY A 101 . ? 1_555 ? 10 AC1 18 GLY A 102 ? GLY A 102 . ? 1_555 ? 11 AC1 18 GLU A 157 ? GLU A 157 . ? 4_466 ? 12 AC1 18 GLY A 158 ? GLY A 158 . ? 4_466 ? 13 AC1 18 HOH C . ? HOH A 602 . ? 1_555 ? 14 AC1 18 HOH C . ? HOH A 610 . ? 1_555 ? 15 AC1 18 HOH C . ? HOH A 620 . ? 1_555 ? 16 AC1 18 HOH C . ? HOH A 657 . ? 1_555 ? 17 AC1 18 HOH C . ? HOH A 676 . ? 1_555 ? 18 AC1 18 HOH C . ? HOH A 690 . ? 1_555 ? # _database_PDB_matrix.entry_id 2Z0K _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2Z0K _atom_sites.fract_transf_matrix[1][1] 0.031821 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019793 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012303 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 PRO 5 5 5 PRO PRO A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 PHE 19 19 19 PHE PHE A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 HIS 21 21 21 HIS HIS A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 PRO 28 28 28 PRO PRO A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 GLN 47 47 47 GLN GLN A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 ASN 69 69 69 ASN ASN A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 ARG 78 78 78 ARG ARG A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 PRO 83 83 83 PRO PRO A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 GLN 86 86 86 GLN GLN A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 PRO 89 89 89 PRO PRO A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 ARG 93 93 93 ARG ARG A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 PHE 98 98 98 PHE PHE A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 PRO 105 105 105 PRO PRO A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 HIS 108 108 108 HIS HIS A . n A 1 109 ASN 109 109 109 ASN ASN A . n A 1 110 THR 110 110 110 THR THR A . n A 1 111 PRO 111 111 111 PRO PRO A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 TYR 115 115 115 TYR TYR A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 TYR 123 123 123 TYR TYR A . n A 1 124 PRO 124 124 124 PRO PRO A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 VAL 126 126 126 VAL VAL A . n A 1 127 TRP 127 127 127 TRP TRP A . n A 1 128 ALA 128 128 128 ALA ALA A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 GLY 130 130 130 GLY GLY A . n A 1 131 GLY 131 131 131 GLY GLY A . n A 1 132 THR 132 132 132 THR THR A . n A 1 133 PRO 133 133 133 PRO PRO A . n A 1 134 ARG 134 134 134 ARG ARG A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 PHE 137 137 137 PHE PHE A . n A 1 138 ARG 138 138 138 ARG ARG A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 THR 140 140 140 THR THR A . n A 1 141 PRO 141 141 141 PRO PRO A . n A 1 142 LYS 142 142 142 LYS LYS A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 ALA 146 146 146 ALA ALA A . n A 1 147 LEU 147 147 147 LEU LEU A . n A 1 148 THR 148 148 148 THR THR A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 GLN 151 151 151 GLN GLN A . n A 1 152 VAL 152 152 152 VAL VAL A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 ASP 154 154 154 ASP ASP A . n A 1 155 LEU 155 155 155 LEU LEU A . n A 1 156 LYS 156 156 156 LYS LYS A . n A 1 157 GLU 157 157 157 GLU GLU A . n A 1 158 GLY 158 158 158 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A5A 1 600 600 A5A A5A A . C 3 HOH 1 601 1 HOH TIP A . C 3 HOH 2 602 2 HOH TIP A . C 3 HOH 3 603 3 HOH TIP A . C 3 HOH 4 604 4 HOH TIP A . C 3 HOH 5 605 5 HOH TIP A . C 3 HOH 6 606 6 HOH TIP A . C 3 HOH 7 607 7 HOH TIP A . C 3 HOH 8 608 8 HOH TIP A . C 3 HOH 9 609 9 HOH TIP A . C 3 HOH 10 610 10 HOH TIP A . C 3 HOH 11 611 11 HOH TIP A . C 3 HOH 12 612 12 HOH TIP A . C 3 HOH 13 613 13 HOH TIP A . C 3 HOH 14 614 14 HOH TIP A . C 3 HOH 15 615 15 HOH TIP A . C 3 HOH 16 616 16 HOH TIP A . C 3 HOH 17 617 17 HOH TIP A . C 3 HOH 18 618 18 HOH TIP A . C 3 HOH 19 619 19 HOH TIP A . C 3 HOH 20 620 20 HOH TIP A . C 3 HOH 21 621 21 HOH TIP A . C 3 HOH 22 622 22 HOH TIP A . C 3 HOH 23 623 23 HOH TIP A . C 3 HOH 24 624 24 HOH TIP A . C 3 HOH 25 625 25 HOH TIP A . C 3 HOH 26 626 26 HOH TIP A . C 3 HOH 27 627 27 HOH TIP A . C 3 HOH 28 628 28 HOH TIP A . C 3 HOH 29 629 29 HOH TIP A . C 3 HOH 30 630 30 HOH TIP A . C 3 HOH 31 631 31 HOH TIP A . C 3 HOH 32 632 32 HOH TIP A . C 3 HOH 33 633 33 HOH TIP A . C 3 HOH 34 634 34 HOH TIP A . C 3 HOH 35 635 35 HOH TIP A . C 3 HOH 36 636 36 HOH TIP A . C 3 HOH 37 637 37 HOH TIP A . C 3 HOH 38 638 38 HOH TIP A . C 3 HOH 39 639 39 HOH TIP A . C 3 HOH 40 640 40 HOH TIP A . C 3 HOH 41 641 41 HOH TIP A . C 3 HOH 42 642 42 HOH TIP A . C 3 HOH 43 643 43 HOH TIP A . C 3 HOH 44 644 44 HOH TIP A . C 3 HOH 45 645 45 HOH TIP A . C 3 HOH 46 646 46 HOH TIP A . C 3 HOH 47 647 47 HOH TIP A . C 3 HOH 48 648 48 HOH TIP A . C 3 HOH 49 649 49 HOH TIP A . C 3 HOH 50 650 50 HOH TIP A . C 3 HOH 51 651 51 HOH TIP A . C 3 HOH 52 652 52 HOH TIP A . C 3 HOH 53 653 53 HOH TIP A . C 3 HOH 54 654 54 HOH TIP A . C 3 HOH 55 655 55 HOH TIP A . C 3 HOH 56 656 56 HOH TIP A . C 3 HOH 57 657 57 HOH TIP A . C 3 HOH 58 658 58 HOH TIP A . C 3 HOH 59 659 59 HOH TIP A . C 3 HOH 60 660 60 HOH TIP A . C 3 HOH 61 661 61 HOH TIP A . C 3 HOH 62 662 62 HOH TIP A . C 3 HOH 63 663 63 HOH TIP A . C 3 HOH 64 664 64 HOH TIP A . C 3 HOH 65 665 65 HOH TIP A . C 3 HOH 66 666 66 HOH TIP A . C 3 HOH 67 667 67 HOH TIP A . C 3 HOH 68 668 68 HOH TIP A . C 3 HOH 69 669 69 HOH TIP A . C 3 HOH 70 670 70 HOH TIP A . C 3 HOH 71 671 71 HOH TIP A . C 3 HOH 72 672 72 HOH TIP A . C 3 HOH 73 673 73 HOH TIP A . C 3 HOH 74 674 74 HOH TIP A . C 3 HOH 75 675 75 HOH TIP A . C 3 HOH 76 676 76 HOH TIP A . C 3 HOH 77 677 77 HOH TIP A . C 3 HOH 78 678 78 HOH TIP A . C 3 HOH 79 679 79 HOH TIP A . C 3 HOH 80 680 80 HOH TIP A . C 3 HOH 81 681 81 HOH TIP A . C 3 HOH 82 682 82 HOH TIP A . C 3 HOH 83 683 83 HOH TIP A . C 3 HOH 84 684 84 HOH TIP A . C 3 HOH 85 685 85 HOH TIP A . C 3 HOH 86 686 86 HOH TIP A . C 3 HOH 87 687 87 HOH TIP A . C 3 HOH 88 688 88 HOH TIP A . C 3 HOH 89 689 89 HOH TIP A . C 3 HOH 90 690 90 HOH TIP A . C 3 HOH 91 691 91 HOH TIP A . C 3 HOH 92 692 92 HOH TIP A . C 3 HOH 93 693 93 HOH TIP A . C 3 HOH 94 694 94 HOH TIP A . C 3 HOH 95 695 95 HOH TIP A . C 3 HOH 96 696 96 HOH TIP A . C 3 HOH 97 697 97 HOH TIP A . C 3 HOH 98 698 98 HOH TIP A . C 3 HOH 99 699 99 HOH TIP A . C 3 HOH 100 700 100 HOH TIP A . C 3 HOH 101 701 101 HOH TIP A . C 3 HOH 102 702 102 HOH TIP A . C 3 HOH 103 703 103 HOH TIP A . C 3 HOH 104 704 104 HOH TIP A . C 3 HOH 105 705 105 HOH TIP A . C 3 HOH 106 706 106 HOH TIP A . C 3 HOH 107 707 107 HOH TIP A . C 3 HOH 108 708 108 HOH TIP A . C 3 HOH 109 709 109 HOH TIP A . C 3 HOH 110 710 110 HOH TIP A . C 3 HOH 111 711 111 HOH TIP A . C 3 HOH 112 712 112 HOH TIP A . C 3 HOH 113 713 113 HOH TIP A . C 3 HOH 114 714 114 HOH TIP A . C 3 HOH 115 715 115 HOH TIP A . C 3 HOH 116 716 116 HOH TIP A . C 3 HOH 117 717 117 HOH TIP A . C 3 HOH 118 718 118 HOH TIP A . C 3 HOH 119 719 119 HOH TIP A . C 3 HOH 120 720 120 HOH TIP A . C 3 HOH 121 721 121 HOH TIP A . C 3 HOH 122 722 122 HOH TIP A . C 3 HOH 123 723 123 HOH TIP A . C 3 HOH 124 724 124 HOH TIP A . C 3 HOH 125 725 125 HOH TIP A . C 3 HOH 126 726 126 HOH TIP A . C 3 HOH 127 727 127 HOH TIP A . C 3 HOH 128 728 128 HOH TIP A . C 3 HOH 129 729 129 HOH TIP A . C 3 HOH 130 730 130 HOH TIP A . C 3 HOH 131 731 131 HOH TIP A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-11-13 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 MOLREP phasing . ? 4 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 2 ? A SER 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A5A N N N N 1 A5A CA C N S 2 A5A CB C N N 3 A5A C C N N 4 A5A O O N N 5 A5A N3S N N N 6 A5A S S N N 7 A5A O1S O N N 8 A5A O2S O N N 9 A5A "O5'" O N N 10 A5A "C5'" C N N 11 A5A "C4'" C N R 12 A5A "O4'" O N N 13 A5A "C3'" C N S 14 A5A "O3'" O N N 15 A5A "C2'" C N R 16 A5A "O2'" O N N 17 A5A "C1'" C N R 18 A5A N9 N Y N 19 A5A C8 C Y N 20 A5A N7 N Y N 21 A5A C5 C Y N 22 A5A C6 C Y N 23 A5A N6 N N N 24 A5A N1 N Y N 25 A5A C2 C Y N 26 A5A N3 N Y N 27 A5A C4 C Y N 28 A5A H H N N 29 A5A HN2 H N N 30 A5A HA H N N 31 A5A HB1 H N N 32 A5A HB2 H N N 33 A5A HB3 H N N 34 A5A H3S H N N 35 A5A "H5'1" H N N 36 A5A "H5'2" H N N 37 A5A "H4'" H N N 38 A5A "H3'" H N N 39 A5A H3T H N N 40 A5A "H2'" H N N 41 A5A "HO'2" H N N 42 A5A "H1'" H N N 43 A5A H8 H N N 44 A5A H61 H N N 45 A5A H62 H N N 46 A5A H2 H N N 47 ALA N N N N 48 ALA CA C N S 49 ALA C C N N 50 ALA O O N N 51 ALA CB C N N 52 ALA OXT O N N 53 ALA H H N N 54 ALA H2 H N N 55 ALA HA H N N 56 ALA HB1 H N N 57 ALA HB2 H N N 58 ALA HB3 H N N 59 ALA HXT H N N 60 ARG N N N N 61 ARG CA C N S 62 ARG C C N N 63 ARG O O N N 64 ARG CB C N N 65 ARG CG C N N 66 ARG CD C N N 67 ARG NE N N N 68 ARG CZ C N N 69 ARG NH1 N N N 70 ARG NH2 N N N 71 ARG OXT O N N 72 ARG H H N N 73 ARG H2 H N N 74 ARG HA H N N 75 ARG HB2 H N N 76 ARG HB3 H N N 77 ARG HG2 H N N 78 ARG HG3 H N N 79 ARG HD2 H N N 80 ARG HD3 H N N 81 ARG HE H N N 82 ARG HH11 H N N 83 ARG HH12 H N N 84 ARG HH21 H N N 85 ARG HH22 H N N 86 ARG HXT H N N 87 ASN N N N N 88 ASN CA C N S 89 ASN C C N N 90 ASN O O N N 91 ASN CB C N N 92 ASN CG C N N 93 ASN OD1 O N N 94 ASN ND2 N N N 95 ASN OXT O N N 96 ASN H H N N 97 ASN H2 H N N 98 ASN HA H N N 99 ASN HB2 H N N 100 ASN HB3 H N N 101 ASN HD21 H N N 102 ASN HD22 H N N 103 ASN HXT H N N 104 ASP N N N N 105 ASP CA C N S 106 ASP C C N N 107 ASP O O N N 108 ASP CB C N N 109 ASP CG C N N 110 ASP OD1 O N N 111 ASP OD2 O N N 112 ASP OXT O N N 113 ASP H H N N 114 ASP H2 H N N 115 ASP HA H N N 116 ASP HB2 H N N 117 ASP HB3 H N N 118 ASP HD2 H N N 119 ASP HXT H N N 120 GLN N N N N 121 GLN CA C N S 122 GLN C C N N 123 GLN O O N N 124 GLN CB C N N 125 GLN CG C N N 126 GLN CD C N N 127 GLN OE1 O N N 128 GLN NE2 N N N 129 GLN OXT O N N 130 GLN H H N N 131 GLN H2 H N N 132 GLN HA H N N 133 GLN HB2 H N N 134 GLN HB3 H N N 135 GLN HG2 H N N 136 GLN HG3 H N N 137 GLN HE21 H N N 138 GLN HE22 H N N 139 GLN HXT H N N 140 GLU N N N N 141 GLU CA C N S 142 GLU C C N N 143 GLU O O N N 144 GLU CB C N N 145 GLU CG C N N 146 GLU CD C N N 147 GLU OE1 O N N 148 GLU OE2 O N N 149 GLU OXT O N N 150 GLU H H N N 151 GLU H2 H N N 152 GLU HA H N N 153 GLU HB2 H N N 154 GLU HB3 H N N 155 GLU HG2 H N N 156 GLU HG3 H N N 157 GLU HE2 H N N 158 GLU HXT H N N 159 GLY N N N N 160 GLY CA C N N 161 GLY C C N N 162 GLY O O N N 163 GLY OXT O N N 164 GLY H H N N 165 GLY H2 H N N 166 GLY HA2 H N N 167 GLY HA3 H N N 168 GLY HXT H N N 169 HIS N N N N 170 HIS CA C N S 171 HIS C C N N 172 HIS O O N N 173 HIS CB C N N 174 HIS CG C Y N 175 HIS ND1 N Y N 176 HIS CD2 C Y N 177 HIS CE1 C Y N 178 HIS NE2 N Y N 179 HIS OXT O N N 180 HIS H H N N 181 HIS H2 H N N 182 HIS HA H N N 183 HIS HB2 H N N 184 HIS HB3 H N N 185 HIS HD1 H N N 186 HIS HD2 H N N 187 HIS HE1 H N N 188 HIS HE2 H N N 189 HIS HXT H N N 190 HOH O O N N 191 HOH H1 H N N 192 HOH H2 H N N 193 ILE N N N N 194 ILE CA C N S 195 ILE C C N N 196 ILE O O N N 197 ILE CB C N S 198 ILE CG1 C N N 199 ILE CG2 C N N 200 ILE CD1 C N N 201 ILE OXT O N N 202 ILE H H N N 203 ILE H2 H N N 204 ILE HA H N N 205 ILE HB H N N 206 ILE HG12 H N N 207 ILE HG13 H N N 208 ILE HG21 H N N 209 ILE HG22 H N N 210 ILE HG23 H N N 211 ILE HD11 H N N 212 ILE HD12 H N N 213 ILE HD13 H N N 214 ILE HXT H N N 215 LEU N N N N 216 LEU CA C N S 217 LEU C C N N 218 LEU O O N N 219 LEU CB C N N 220 LEU CG C N N 221 LEU CD1 C N N 222 LEU CD2 C N N 223 LEU OXT O N N 224 LEU H H N N 225 LEU H2 H N N 226 LEU HA H N N 227 LEU HB2 H N N 228 LEU HB3 H N N 229 LEU HG H N N 230 LEU HD11 H N N 231 LEU HD12 H N N 232 LEU HD13 H N N 233 LEU HD21 H N N 234 LEU HD22 H N N 235 LEU HD23 H N N 236 LEU HXT H N N 237 LYS N N N N 238 LYS CA C N S 239 LYS C C N N 240 LYS O O N N 241 LYS CB C N N 242 LYS CG C N N 243 LYS CD C N N 244 LYS CE C N N 245 LYS NZ N N N 246 LYS OXT O N N 247 LYS H H N N 248 LYS H2 H N N 249 LYS HA H N N 250 LYS HB2 H N N 251 LYS HB3 H N N 252 LYS HG2 H N N 253 LYS HG3 H N N 254 LYS HD2 H N N 255 LYS HD3 H N N 256 LYS HE2 H N N 257 LYS HE3 H N N 258 LYS HZ1 H N N 259 LYS HZ2 H N N 260 LYS HZ3 H N N 261 LYS HXT H N N 262 MET N N N N 263 MET CA C N S 264 MET C C N N 265 MET O O N N 266 MET CB C N N 267 MET CG C N N 268 MET SD S N N 269 MET CE C N N 270 MET OXT O N N 271 MET H H N N 272 MET H2 H N N 273 MET HA H N N 274 MET HB2 H N N 275 MET HB3 H N N 276 MET HG2 H N N 277 MET HG3 H N N 278 MET HE1 H N N 279 MET HE2 H N N 280 MET HE3 H N N 281 MET HXT H N N 282 PHE N N N N 283 PHE CA C N S 284 PHE C C N N 285 PHE O O N N 286 PHE CB C N N 287 PHE CG C Y N 288 PHE CD1 C Y N 289 PHE CD2 C Y N 290 PHE CE1 C Y N 291 PHE CE2 C Y N 292 PHE CZ C Y N 293 PHE OXT O N N 294 PHE H H N N 295 PHE H2 H N N 296 PHE HA H N N 297 PHE HB2 H N N 298 PHE HB3 H N N 299 PHE HD1 H N N 300 PHE HD2 H N N 301 PHE HE1 H N N 302 PHE HE2 H N N 303 PHE HZ H N N 304 PHE HXT H N N 305 PRO N N N N 306 PRO CA C N S 307 PRO C C N N 308 PRO O O N N 309 PRO CB C N N 310 PRO CG C N N 311 PRO CD C N N 312 PRO OXT O N N 313 PRO H H N N 314 PRO HA H N N 315 PRO HB2 H N N 316 PRO HB3 H N N 317 PRO HG2 H N N 318 PRO HG3 H N N 319 PRO HD2 H N N 320 PRO HD3 H N N 321 PRO HXT H N N 322 SER N N N N 323 SER CA C N S 324 SER C C N N 325 SER O O N N 326 SER CB C N N 327 SER OG O N N 328 SER OXT O N N 329 SER H H N N 330 SER H2 H N N 331 SER HA H N N 332 SER HB2 H N N 333 SER HB3 H N N 334 SER HG H N N 335 SER HXT H N N 336 THR N N N N 337 THR CA C N S 338 THR C C N N 339 THR O O N N 340 THR CB C N R 341 THR OG1 O N N 342 THR CG2 C N N 343 THR OXT O N N 344 THR H H N N 345 THR H2 H N N 346 THR HA H N N 347 THR HB H N N 348 THR HG1 H N N 349 THR HG21 H N N 350 THR HG22 H N N 351 THR HG23 H N N 352 THR HXT H N N 353 TRP N N N N 354 TRP CA C N S 355 TRP C C N N 356 TRP O O N N 357 TRP CB C N N 358 TRP CG C Y N 359 TRP CD1 C Y N 360 TRP CD2 C Y N 361 TRP NE1 N Y N 362 TRP CE2 C Y N 363 TRP CE3 C Y N 364 TRP CZ2 C Y N 365 TRP CZ3 C Y N 366 TRP CH2 C Y N 367 TRP OXT O N N 368 TRP H H N N 369 TRP H2 H N N 370 TRP HA H N N 371 TRP HB2 H N N 372 TRP HB3 H N N 373 TRP HD1 H N N 374 TRP HE1 H N N 375 TRP HE3 H N N 376 TRP HZ2 H N N 377 TRP HZ3 H N N 378 TRP HH2 H N N 379 TRP HXT H N N 380 TYR N N N N 381 TYR CA C N S 382 TYR C C N N 383 TYR O O N N 384 TYR CB C N N 385 TYR CG C Y N 386 TYR CD1 C Y N 387 TYR CD2 C Y N 388 TYR CE1 C Y N 389 TYR CE2 C Y N 390 TYR CZ C Y N 391 TYR OH O N N 392 TYR OXT O N N 393 TYR H H N N 394 TYR H2 H N N 395 TYR HA H N N 396 TYR HB2 H N N 397 TYR HB3 H N N 398 TYR HD1 H N N 399 TYR HD2 H N N 400 TYR HE1 H N N 401 TYR HE2 H N N 402 TYR HH H N N 403 TYR HXT H N N 404 VAL N N N N 405 VAL CA C N S 406 VAL C C N N 407 VAL O O N N 408 VAL CB C N N 409 VAL CG1 C N N 410 VAL CG2 C N N 411 VAL OXT O N N 412 VAL H H N N 413 VAL H2 H N N 414 VAL HA H N N 415 VAL HB H N N 416 VAL HG11 H N N 417 VAL HG12 H N N 418 VAL HG13 H N N 419 VAL HG21 H N N 420 VAL HG22 H N N 421 VAL HG23 H N N 422 VAL HXT H N N 423 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A5A N CA sing N N 1 A5A N H sing N N 2 A5A N HN2 sing N N 3 A5A CA CB sing N N 4 A5A CA C sing N N 5 A5A CA HA sing N N 6 A5A CB HB1 sing N N 7 A5A CB HB2 sing N N 8 A5A CB HB3 sing N N 9 A5A C O doub N N 10 A5A C N3S sing N N 11 A5A N3S S sing N N 12 A5A N3S H3S sing N N 13 A5A S O1S doub N N 14 A5A S O2S doub N N 15 A5A S "O5'" sing N N 16 A5A "O5'" "C5'" sing N N 17 A5A "C5'" "C4'" sing N N 18 A5A "C5'" "H5'1" sing N N 19 A5A "C5'" "H5'2" sing N N 20 A5A "C4'" "O4'" sing N N 21 A5A "C4'" "C3'" sing N N 22 A5A "C4'" "H4'" sing N N 23 A5A "O4'" "C1'" sing N N 24 A5A "C3'" "O3'" sing N N 25 A5A "C3'" "C2'" sing N N 26 A5A "C3'" "H3'" sing N N 27 A5A "O3'" H3T sing N N 28 A5A "C2'" "O2'" sing N N 29 A5A "C2'" "C1'" sing N N 30 A5A "C2'" "H2'" sing N N 31 A5A "O2'" "HO'2" sing N N 32 A5A "C1'" N9 sing N N 33 A5A "C1'" "H1'" sing N N 34 A5A N9 C8 sing Y N 35 A5A N9 C4 sing Y N 36 A5A C8 N7 doub Y N 37 A5A C8 H8 sing N N 38 A5A N7 C5 sing Y N 39 A5A C5 C6 doub Y N 40 A5A C5 C4 sing Y N 41 A5A C6 N6 sing N N 42 A5A C6 N1 sing Y N 43 A5A N6 H61 sing N N 44 A5A N6 H62 sing N N 45 A5A N1 C2 doub Y N 46 A5A C2 N3 sing Y N 47 A5A C2 H2 sing N N 48 A5A N3 C4 doub Y N 49 ALA N CA sing N N 50 ALA N H sing N N 51 ALA N H2 sing N N 52 ALA CA C sing N N 53 ALA CA CB sing N N 54 ALA CA HA sing N N 55 ALA C O doub N N 56 ALA C OXT sing N N 57 ALA CB HB1 sing N N 58 ALA CB HB2 sing N N 59 ALA CB HB3 sing N N 60 ALA OXT HXT sing N N 61 ARG N CA sing N N 62 ARG N H sing N N 63 ARG N H2 sing N N 64 ARG CA C sing N N 65 ARG CA CB sing N N 66 ARG CA HA sing N N 67 ARG C O doub N N 68 ARG C OXT sing N N 69 ARG CB CG sing N N 70 ARG CB HB2 sing N N 71 ARG CB HB3 sing N N 72 ARG CG CD sing N N 73 ARG CG HG2 sing N N 74 ARG CG HG3 sing N N 75 ARG CD NE sing N N 76 ARG CD HD2 sing N N 77 ARG CD HD3 sing N N 78 ARG NE CZ sing N N 79 ARG NE HE sing N N 80 ARG CZ NH1 sing N N 81 ARG CZ NH2 doub N N 82 ARG NH1 HH11 sing N N 83 ARG NH1 HH12 sing N N 84 ARG NH2 HH21 sing N N 85 ARG NH2 HH22 sing N N 86 ARG OXT HXT sing N N 87 ASN N CA sing N N 88 ASN N H sing N N 89 ASN N H2 sing N N 90 ASN CA C sing N N 91 ASN CA CB sing N N 92 ASN CA HA sing N N 93 ASN C O doub N N 94 ASN C OXT sing N N 95 ASN CB CG sing N N 96 ASN CB HB2 sing N N 97 ASN CB HB3 sing N N 98 ASN CG OD1 doub N N 99 ASN CG ND2 sing N N 100 ASN ND2 HD21 sing N N 101 ASN ND2 HD22 sing N N 102 ASN OXT HXT sing N N 103 ASP N CA sing N N 104 ASP N H sing N N 105 ASP N H2 sing N N 106 ASP CA C sing N N 107 ASP CA CB sing N N 108 ASP CA HA sing N N 109 ASP C O doub N N 110 ASP C OXT sing N N 111 ASP CB CG sing N N 112 ASP CB HB2 sing N N 113 ASP CB HB3 sing N N 114 ASP CG OD1 doub N N 115 ASP CG OD2 sing N N 116 ASP OD2 HD2 sing N N 117 ASP OXT HXT sing N N 118 GLN N CA sing N N 119 GLN N H sing N N 120 GLN N H2 sing N N 121 GLN CA C sing N N 122 GLN CA CB sing N N 123 GLN CA HA sing N N 124 GLN C O doub N N 125 GLN C OXT sing N N 126 GLN CB CG sing N N 127 GLN CB HB2 sing N N 128 GLN CB HB3 sing N N 129 GLN CG CD sing N N 130 GLN CG HG2 sing N N 131 GLN CG HG3 sing N N 132 GLN CD OE1 doub N N 133 GLN CD NE2 sing N N 134 GLN NE2 HE21 sing N N 135 GLN NE2 HE22 sing N N 136 GLN OXT HXT sing N N 137 GLU N CA sing N N 138 GLU N H sing N N 139 GLU N H2 sing N N 140 GLU CA C sing N N 141 GLU CA CB sing N N 142 GLU CA HA sing N N 143 GLU C O doub N N 144 GLU C OXT sing N N 145 GLU CB CG sing N N 146 GLU CB HB2 sing N N 147 GLU CB HB3 sing N N 148 GLU CG CD sing N N 149 GLU CG HG2 sing N N 150 GLU CG HG3 sing N N 151 GLU CD OE1 doub N N 152 GLU CD OE2 sing N N 153 GLU OE2 HE2 sing N N 154 GLU OXT HXT sing N N 155 GLY N CA sing N N 156 GLY N H sing N N 157 GLY N H2 sing N N 158 GLY CA C sing N N 159 GLY CA HA2 sing N N 160 GLY CA HA3 sing N N 161 GLY C O doub N N 162 GLY C OXT sing N N 163 GLY OXT HXT sing N N 164 HIS N CA sing N N 165 HIS N H sing N N 166 HIS N H2 sing N N 167 HIS CA C sing N N 168 HIS CA CB sing N N 169 HIS CA HA sing N N 170 HIS C O doub N N 171 HIS C OXT sing N N 172 HIS CB CG sing N N 173 HIS CB HB2 sing N N 174 HIS CB HB3 sing N N 175 HIS CG ND1 sing Y N 176 HIS CG CD2 doub Y N 177 HIS ND1 CE1 doub Y N 178 HIS ND1 HD1 sing N N 179 HIS CD2 NE2 sing Y N 180 HIS CD2 HD2 sing N N 181 HIS CE1 NE2 sing Y N 182 HIS CE1 HE1 sing N N 183 HIS NE2 HE2 sing N N 184 HIS OXT HXT sing N N 185 HOH O H1 sing N N 186 HOH O H2 sing N N 187 ILE N CA sing N N 188 ILE N H sing N N 189 ILE N H2 sing N N 190 ILE CA C sing N N 191 ILE CA CB sing N N 192 ILE CA HA sing N N 193 ILE C O doub N N 194 ILE C OXT sing N N 195 ILE CB CG1 sing N N 196 ILE CB CG2 sing N N 197 ILE CB HB sing N N 198 ILE CG1 CD1 sing N N 199 ILE CG1 HG12 sing N N 200 ILE CG1 HG13 sing N N 201 ILE CG2 HG21 sing N N 202 ILE CG2 HG22 sing N N 203 ILE CG2 HG23 sing N N 204 ILE CD1 HD11 sing N N 205 ILE CD1 HD12 sing N N 206 ILE CD1 HD13 sing N N 207 ILE OXT HXT sing N N 208 LEU N CA sing N N 209 LEU N H sing N N 210 LEU N H2 sing N N 211 LEU CA C sing N N 212 LEU CA CB sing N N 213 LEU CA HA sing N N 214 LEU C O doub N N 215 LEU C OXT sing N N 216 LEU CB CG sing N N 217 LEU CB HB2 sing N N 218 LEU CB HB3 sing N N 219 LEU CG CD1 sing N N 220 LEU CG CD2 sing N N 221 LEU CG HG sing N N 222 LEU CD1 HD11 sing N N 223 LEU CD1 HD12 sing N N 224 LEU CD1 HD13 sing N N 225 LEU CD2 HD21 sing N N 226 LEU CD2 HD22 sing N N 227 LEU CD2 HD23 sing N N 228 LEU OXT HXT sing N N 229 LYS N CA sing N N 230 LYS N H sing N N 231 LYS N H2 sing N N 232 LYS CA C sing N N 233 LYS CA CB sing N N 234 LYS CA HA sing N N 235 LYS C O doub N N 236 LYS C OXT sing N N 237 LYS CB CG sing N N 238 LYS CB HB2 sing N N 239 LYS CB HB3 sing N N 240 LYS CG CD sing N N 241 LYS CG HG2 sing N N 242 LYS CG HG3 sing N N 243 LYS CD CE sing N N 244 LYS CD HD2 sing N N 245 LYS CD HD3 sing N N 246 LYS CE NZ sing N N 247 LYS CE HE2 sing N N 248 LYS CE HE3 sing N N 249 LYS NZ HZ1 sing N N 250 LYS NZ HZ2 sing N N 251 LYS NZ HZ3 sing N N 252 LYS OXT HXT sing N N 253 MET N CA sing N N 254 MET N H sing N N 255 MET N H2 sing N N 256 MET CA C sing N N 257 MET CA CB sing N N 258 MET CA HA sing N N 259 MET C O doub N N 260 MET C OXT sing N N 261 MET CB CG sing N N 262 MET CB HB2 sing N N 263 MET CB HB3 sing N N 264 MET CG SD sing N N 265 MET CG HG2 sing N N 266 MET CG HG3 sing N N 267 MET SD CE sing N N 268 MET CE HE1 sing N N 269 MET CE HE2 sing N N 270 MET CE HE3 sing N N 271 MET OXT HXT sing N N 272 PHE N CA sing N N 273 PHE N H sing N N 274 PHE N H2 sing N N 275 PHE CA C sing N N 276 PHE CA CB sing N N 277 PHE CA HA sing N N 278 PHE C O doub N N 279 PHE C OXT sing N N 280 PHE CB CG sing N N 281 PHE CB HB2 sing N N 282 PHE CB HB3 sing N N 283 PHE CG CD1 doub Y N 284 PHE CG CD2 sing Y N 285 PHE CD1 CE1 sing Y N 286 PHE CD1 HD1 sing N N 287 PHE CD2 CE2 doub Y N 288 PHE CD2 HD2 sing N N 289 PHE CE1 CZ doub Y N 290 PHE CE1 HE1 sing N N 291 PHE CE2 CZ sing Y N 292 PHE CE2 HE2 sing N N 293 PHE CZ HZ sing N N 294 PHE OXT HXT sing N N 295 PRO N CA sing N N 296 PRO N CD sing N N 297 PRO N H sing N N 298 PRO CA C sing N N 299 PRO CA CB sing N N 300 PRO CA HA sing N N 301 PRO C O doub N N 302 PRO C OXT sing N N 303 PRO CB CG sing N N 304 PRO CB HB2 sing N N 305 PRO CB HB3 sing N N 306 PRO CG CD sing N N 307 PRO CG HG2 sing N N 308 PRO CG HG3 sing N N 309 PRO CD HD2 sing N N 310 PRO CD HD3 sing N N 311 PRO OXT HXT sing N N 312 SER N CA sing N N 313 SER N H sing N N 314 SER N H2 sing N N 315 SER CA C sing N N 316 SER CA CB sing N N 317 SER CA HA sing N N 318 SER C O doub N N 319 SER C OXT sing N N 320 SER CB OG sing N N 321 SER CB HB2 sing N N 322 SER CB HB3 sing N N 323 SER OG HG sing N N 324 SER OXT HXT sing N N 325 THR N CA sing N N 326 THR N H sing N N 327 THR N H2 sing N N 328 THR CA C sing N N 329 THR CA CB sing N N 330 THR CA HA sing N N 331 THR C O doub N N 332 THR C OXT sing N N 333 THR CB OG1 sing N N 334 THR CB CG2 sing N N 335 THR CB HB sing N N 336 THR OG1 HG1 sing N N 337 THR CG2 HG21 sing N N 338 THR CG2 HG22 sing N N 339 THR CG2 HG23 sing N N 340 THR OXT HXT sing N N 341 TRP N CA sing N N 342 TRP N H sing N N 343 TRP N H2 sing N N 344 TRP CA C sing N N 345 TRP CA CB sing N N 346 TRP CA HA sing N N 347 TRP C O doub N N 348 TRP C OXT sing N N 349 TRP CB CG sing N N 350 TRP CB HB2 sing N N 351 TRP CB HB3 sing N N 352 TRP CG CD1 doub Y N 353 TRP CG CD2 sing Y N 354 TRP CD1 NE1 sing Y N 355 TRP CD1 HD1 sing N N 356 TRP CD2 CE2 doub Y N 357 TRP CD2 CE3 sing Y N 358 TRP NE1 CE2 sing Y N 359 TRP NE1 HE1 sing N N 360 TRP CE2 CZ2 sing Y N 361 TRP CE3 CZ3 doub Y N 362 TRP CE3 HE3 sing N N 363 TRP CZ2 CH2 doub Y N 364 TRP CZ2 HZ2 sing N N 365 TRP CZ3 CH2 sing Y N 366 TRP CZ3 HZ3 sing N N 367 TRP CH2 HH2 sing N N 368 TRP OXT HXT sing N N 369 TYR N CA sing N N 370 TYR N H sing N N 371 TYR N H2 sing N N 372 TYR CA C sing N N 373 TYR CA CB sing N N 374 TYR CA HA sing N N 375 TYR C O doub N N 376 TYR C OXT sing N N 377 TYR CB CG sing N N 378 TYR CB HB2 sing N N 379 TYR CB HB3 sing N N 380 TYR CG CD1 doub Y N 381 TYR CG CD2 sing Y N 382 TYR CD1 CE1 sing Y N 383 TYR CD1 HD1 sing N N 384 TYR CD2 CE2 doub Y N 385 TYR CD2 HD2 sing N N 386 TYR CE1 CZ doub Y N 387 TYR CE1 HE1 sing N N 388 TYR CE2 CZ sing Y N 389 TYR CE2 HE2 sing N N 390 TYR CZ OH sing N N 391 TYR OH HH sing N N 392 TYR OXT HXT sing N N 393 VAL N CA sing N N 394 VAL N H sing N N 395 VAL N H2 sing N N 396 VAL CA C sing N N 397 VAL CA CB sing N N 398 VAL CA HA sing N N 399 VAL C O doub N N 400 VAL C OXT sing N N 401 VAL CB CG1 sing N N 402 VAL CB CG2 sing N N 403 VAL CB HB sing N N 404 VAL CG1 HG11 sing N N 405 VAL CG1 HG12 sing N N 406 VAL CG1 HG13 sing N N 407 VAL CG2 HG21 sing N N 408 VAL CG2 HG22 sing N N 409 VAL CG2 HG23 sing N N 410 VAL OXT HXT sing N N 411 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "'5'-O-(N-(L-ALANYL)-SULFAMOYL)ADENOSINE" A5A 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2CX5 _pdbx_initial_refinement_model.details 'PDB ENTRY 2CX5' #