data_2Z1C # _entry.id 2Z1C # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2Z1C pdb_00002z1c 10.2210/pdb2z1c/pdb RCSB RCSB027396 ? ? WWPDB D_1000027396 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-07-17 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2Z1C _pdbx_database_status.recvd_initial_deposition_date 2007-05-08 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2Z1D . unspecified PDB 2Z1E . unspecified PDB 2Z1F . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Watanabe, S.' 1 'Matsumi, R.' 2 'Arai, T.' 3 'Atomi, H.' 4 'Imanaka, T.' 5 'Miki, K.' 6 # _citation.id primary _citation.title ;Crystal Structures of [NiFe] Hydrogenase Maturation Proteins HypC, HypD, and HypE: Insights into Cyanation Reaction by Thiol Redox Signaling ; _citation.journal_abbrev Mol.Cell _citation.journal_volume 27 _citation.page_first 29 _citation.page_last 40 _citation.year 2007 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17612488 _citation.pdbx_database_id_DOI 10.1016/j.molcel.2007.05.039 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Watanabe, S.' 1 ? primary 'Matsumi, R.' 2 ? primary 'Arai, T.' 3 ? primary 'Atomi, H.' 4 ? primary 'Imanaka, T.' 5 ? primary 'Miki, K.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hydrogenase expression/formation protein HypC' 8264.673 3 ? ? ? ? 2 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 3 non-polymer syn 'TETRAETHYLENE GLYCOL' 194.226 1 ? ? ? ? 4 water nat water 18.015 106 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MCLAVPGKVIEVNGPVAVVDFGGVKREVRLDLMPDTKPGDWVIVHTGFAIEKLDEKKAMEILEAWAEVEKAMEGF _entity_poly.pdbx_seq_one_letter_code_can MCLAVPGKVIEVNGPVAVVDFGGVKREVRLDLMPDTKPGDWVIVHTGFAIEKLDEKKAMEILEAWAEVEKAMEGF _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 'TETRAETHYLENE GLYCOL' PG4 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 CYS n 1 3 LEU n 1 4 ALA n 1 5 VAL n 1 6 PRO n 1 7 GLY n 1 8 LYS n 1 9 VAL n 1 10 ILE n 1 11 GLU n 1 12 VAL n 1 13 ASN n 1 14 GLY n 1 15 PRO n 1 16 VAL n 1 17 ALA n 1 18 VAL n 1 19 VAL n 1 20 ASP n 1 21 PHE n 1 22 GLY n 1 23 GLY n 1 24 VAL n 1 25 LYS n 1 26 ARG n 1 27 GLU n 1 28 VAL n 1 29 ARG n 1 30 LEU n 1 31 ASP n 1 32 LEU n 1 33 MET n 1 34 PRO n 1 35 ASP n 1 36 THR n 1 37 LYS n 1 38 PRO n 1 39 GLY n 1 40 ASP n 1 41 TRP n 1 42 VAL n 1 43 ILE n 1 44 VAL n 1 45 HIS n 1 46 THR n 1 47 GLY n 1 48 PHE n 1 49 ALA n 1 50 ILE n 1 51 GLU n 1 52 LYS n 1 53 LEU n 1 54 ASP n 1 55 GLU n 1 56 LYS n 1 57 LYS n 1 58 ALA n 1 59 MET n 1 60 GLU n 1 61 ILE n 1 62 LEU n 1 63 GLU n 1 64 ALA n 1 65 TRP n 1 66 ALA n 1 67 GLU n 1 68 VAL n 1 69 GLU n 1 70 LYS n 1 71 ALA n 1 72 MET n 1 73 GLU n 1 74 GLY n 1 75 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene hypC _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain KOD1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermococcus kodakarensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 69014 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET21a(+)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PG4 non-polymer . 'TETRAETHYLENE GLYCOL' ? 'C8 H18 O5' 194.226 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 CYS 2 2 2 CYS CYS A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 PRO 6 6 6 PRO PRO A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 ILE 10 10 10 ILE ILE A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 PHE 21 21 21 PHE PHE A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 ARG 29 29 29 ARG ARG A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 MET 33 33 33 MET MET A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 TRP 41 41 41 TRP TRP A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 HIS 45 45 45 HIS HIS A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 PHE 48 48 48 PHE PHE A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 MET 59 59 59 MET MET A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 TRP 65 65 65 TRP TRP A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 MET 72 72 72 MET MET A . n A 1 73 GLU 73 73 ? ? ? A . n A 1 74 GLY 74 74 ? ? ? A . n A 1 75 PHE 75 75 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 CYS 2 2 2 CYS CYS B . n B 1 3 LEU 3 3 3 LEU LEU B . n B 1 4 ALA 4 4 4 ALA ALA B . n B 1 5 VAL 5 5 5 VAL VAL B . n B 1 6 PRO 6 6 6 PRO PRO B . n B 1 7 GLY 7 7 7 GLY GLY B . n B 1 8 LYS 8 8 8 LYS LYS B . n B 1 9 VAL 9 9 9 VAL VAL B . n B 1 10 ILE 10 10 10 ILE ILE B . n B 1 11 GLU 11 11 11 GLU GLU B . n B 1 12 VAL 12 12 12 VAL VAL B . n B 1 13 ASN 13 13 13 ASN ASN B . n B 1 14 GLY 14 14 14 GLY GLY B . n B 1 15 PRO 15 15 15 PRO PRO B . n B 1 16 VAL 16 16 16 VAL VAL B . n B 1 17 ALA 17 17 17 ALA ALA B . n B 1 18 VAL 18 18 18 VAL VAL B . n B 1 19 VAL 19 19 19 VAL VAL B . n B 1 20 ASP 20 20 20 ASP ASP B . n B 1 21 PHE 21 21 21 PHE PHE B . n B 1 22 GLY 22 22 22 GLY GLY B . n B 1 23 GLY 23 23 23 GLY GLY B . n B 1 24 VAL 24 24 24 VAL VAL B . n B 1 25 LYS 25 25 25 LYS LYS B . n B 1 26 ARG 26 26 26 ARG ARG B . n B 1 27 GLU 27 27 27 GLU GLU B . n B 1 28 VAL 28 28 28 VAL VAL B . n B 1 29 ARG 29 29 29 ARG ARG B . n B 1 30 LEU 30 30 30 LEU LEU B . n B 1 31 ASP 31 31 31 ASP ASP B . n B 1 32 LEU 32 32 32 LEU LEU B . n B 1 33 MET 33 33 33 MET MET B . n B 1 34 PRO 34 34 34 PRO PRO B . n B 1 35 ASP 35 35 35 ASP ASP B . n B 1 36 THR 36 36 36 THR THR B . n B 1 37 LYS 37 37 37 LYS LYS B . n B 1 38 PRO 38 38 38 PRO PRO B . n B 1 39 GLY 39 39 39 GLY GLY B . n B 1 40 ASP 40 40 40 ASP ASP B . n B 1 41 TRP 41 41 41 TRP TRP B . n B 1 42 VAL 42 42 42 VAL VAL B . n B 1 43 ILE 43 43 43 ILE ILE B . n B 1 44 VAL 44 44 44 VAL VAL B . n B 1 45 HIS 45 45 45 HIS HIS B . n B 1 46 THR 46 46 46 THR THR B . n B 1 47 GLY 47 47 47 GLY GLY B . n B 1 48 PHE 48 48 48 PHE PHE B . n B 1 49 ALA 49 49 49 ALA ALA B . n B 1 50 ILE 50 50 50 ILE ILE B . n B 1 51 GLU 51 51 51 GLU GLU B . n B 1 52 LYS 52 52 52 LYS LYS B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 ASP 54 54 54 ASP ASP B . n B 1 55 GLU 55 55 55 GLU GLU B . n B 1 56 LYS 56 56 56 LYS LYS B . n B 1 57 LYS 57 57 57 LYS LYS B . n B 1 58 ALA 58 58 58 ALA ALA B . n B 1 59 MET 59 59 59 MET MET B . n B 1 60 GLU 60 60 60 GLU GLU B . n B 1 61 ILE 61 61 61 ILE ILE B . n B 1 62 LEU 62 62 62 LEU LEU B . n B 1 63 GLU 63 63 63 GLU GLU B . n B 1 64 ALA 64 64 64 ALA ALA B . n B 1 65 TRP 65 65 65 TRP TRP B . n B 1 66 ALA 66 66 66 ALA ALA B . n B 1 67 GLU 67 67 67 GLU GLU B . n B 1 68 VAL 68 68 68 VAL VAL B . n B 1 69 GLU 69 69 69 GLU GLU B . n B 1 70 LYS 70 70 70 LYS LYS B . n B 1 71 ALA 71 71 71 ALA ALA B . n B 1 72 MET 72 72 72 MET MET B . n B 1 73 GLU 73 73 73 GLU GLU B . n B 1 74 GLY 74 74 74 GLY GLY B . n B 1 75 PHE 75 75 75 PHE PHE B . n C 1 1 MET 1 1 ? ? ? C . n C 1 2 CYS 2 2 ? ? ? C . n C 1 3 LEU 3 3 3 LEU LEU C . n C 1 4 ALA 4 4 4 ALA ALA C . n C 1 5 VAL 5 5 5 VAL VAL C . n C 1 6 PRO 6 6 6 PRO PRO C . n C 1 7 GLY 7 7 7 GLY GLY C . n C 1 8 LYS 8 8 8 LYS LYS C . n C 1 9 VAL 9 9 9 VAL VAL C . n C 1 10 ILE 10 10 10 ILE ILE C . n C 1 11 GLU 11 11 11 GLU GLU C . n C 1 12 VAL 12 12 12 VAL VAL C . n C 1 13 ASN 13 13 13 ASN ASN C . n C 1 14 GLY 14 14 14 GLY GLY C . n C 1 15 PRO 15 15 15 PRO PRO C . n C 1 16 VAL 16 16 16 VAL VAL C . n C 1 17 ALA 17 17 17 ALA ALA C . n C 1 18 VAL 18 18 18 VAL VAL C . n C 1 19 VAL 19 19 19 VAL VAL C . n C 1 20 ASP 20 20 20 ASP ASP C . n C 1 21 PHE 21 21 21 PHE PHE C . n C 1 22 GLY 22 22 22 GLY GLY C . n C 1 23 GLY 23 23 23 GLY GLY C . n C 1 24 VAL 24 24 24 VAL VAL C . n C 1 25 LYS 25 25 25 LYS LYS C . n C 1 26 ARG 26 26 26 ARG ARG C . n C 1 27 GLU 27 27 27 GLU GLU C . n C 1 28 VAL 28 28 28 VAL VAL C . n C 1 29 ARG 29 29 29 ARG ARG C . n C 1 30 LEU 30 30 30 LEU LEU C . n C 1 31 ASP 31 31 31 ASP ASP C . n C 1 32 LEU 32 32 32 LEU LEU C . n C 1 33 MET 33 33 33 MET MET C . n C 1 34 PRO 34 34 34 PRO PRO C . n C 1 35 ASP 35 35 35 ASP ASP C . n C 1 36 THR 36 36 36 THR THR C . n C 1 37 LYS 37 37 37 LYS LYS C . n C 1 38 PRO 38 38 ? ? ? C . n C 1 39 GLY 39 39 39 GLY GLY C . n C 1 40 ASP 40 40 40 ASP ASP C . n C 1 41 TRP 41 41 41 TRP TRP C . n C 1 42 VAL 42 42 42 VAL VAL C . n C 1 43 ILE 43 43 43 ILE ILE C . n C 1 44 VAL 44 44 44 VAL VAL C . n C 1 45 HIS 45 45 45 HIS HIS C . n C 1 46 THR 46 46 46 THR THR C . n C 1 47 GLY 47 47 47 GLY GLY C . n C 1 48 PHE 48 48 48 PHE PHE C . n C 1 49 ALA 49 49 49 ALA ALA C . n C 1 50 ILE 50 50 50 ILE ILE C . n C 1 51 GLU 51 51 51 GLU GLU C . n C 1 52 LYS 52 52 ? ? ? C . n C 1 53 LEU 53 53 53 LEU LEU C . n C 1 54 ASP 54 54 54 ASP ASP C . n C 1 55 GLU 55 55 55 GLU GLU C . n C 1 56 LYS 56 56 56 LYS LYS C . n C 1 57 LYS 57 57 57 LYS LYS C . n C 1 58 ALA 58 58 58 ALA ALA C . n C 1 59 MET 59 59 59 MET MET C . n C 1 60 GLU 60 60 60 GLU GLU C . n C 1 61 ILE 61 61 61 ILE ILE C . n C 1 62 LEU 62 62 62 LEU LEU C . n C 1 63 GLU 63 63 63 GLU GLU C . n C 1 64 ALA 64 64 64 ALA ALA C . n C 1 65 TRP 65 65 65 TRP TRP C . n C 1 66 ALA 66 66 66 ALA ALA C . n C 1 67 GLU 67 67 67 GLU GLU C . n C 1 68 VAL 68 68 68 VAL VAL C . n C 1 69 GLU 69 69 69 GLU GLU C . n C 1 70 LYS 70 70 70 LYS LYS C . n C 1 71 ALA 71 71 71 ALA ALA C . n C 1 72 MET 72 72 72 MET MET C . n C 1 73 GLU 73 73 73 GLU GLU C . n C 1 74 GLY 74 74 74 GLY GLY C . n C 1 75 PHE 75 75 75 PHE PHE C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 GOL 1 901 901 GOL GOL A . E 3 PG4 1 502 502 PG4 PG4 B . F 4 HOH 1 202 202 HOH HOH A . F 4 HOH 2 205 205 HOH HOH A . F 4 HOH 3 207 207 HOH HOH A . F 4 HOH 4 208 208 HOH HOH A . F 4 HOH 5 210 210 HOH HOH A . F 4 HOH 6 213 213 HOH HOH A . F 4 HOH 7 214 214 HOH HOH A . F 4 HOH 8 215 215 HOH HOH A . F 4 HOH 9 216 216 HOH HOH A . F 4 HOH 10 218 218 HOH HOH A . F 4 HOH 11 219 219 HOH HOH A . F 4 HOH 12 220 220 HOH HOH A . F 4 HOH 13 222 222 HOH HOH A . F 4 HOH 14 223 223 HOH HOH A . F 4 HOH 15 232 232 HOH HOH A . F 4 HOH 16 234 234 HOH HOH A . F 4 HOH 17 235 235 HOH HOH A . F 4 HOH 18 236 236 HOH HOH A . F 4 HOH 19 237 237 HOH HOH A . F 4 HOH 20 238 238 HOH HOH A . F 4 HOH 21 239 239 HOH HOH A . F 4 HOH 22 240 240 HOH HOH A . F 4 HOH 23 241 241 HOH HOH A . F 4 HOH 24 242 242 HOH HOH A . F 4 HOH 25 243 243 HOH HOH A . F 4 HOH 26 244 244 HOH HOH A . F 4 HOH 27 248 248 HOH HOH A . F 4 HOH 28 251 251 HOH HOH A . F 4 HOH 29 252 252 HOH HOH A . F 4 HOH 30 255 255 HOH HOH A . F 4 HOH 31 259 259 HOH HOH A . F 4 HOH 32 260 260 HOH HOH A . F 4 HOH 33 261 261 HOH HOH A . F 4 HOH 34 262 262 HOH HOH A . F 4 HOH 35 263 263 HOH HOH A . F 4 HOH 36 264 264 HOH HOH A . F 4 HOH 37 265 265 HOH HOH A . F 4 HOH 38 266 266 HOH HOH A . F 4 HOH 39 268 268 HOH HOH A . F 4 HOH 40 270 270 HOH HOH A . F 4 HOH 41 273 273 HOH HOH A . F 4 HOH 42 275 275 HOH HOH A . F 4 HOH 43 276 276 HOH HOH A . F 4 HOH 44 277 277 HOH HOH A . F 4 HOH 45 285 285 HOH HOH A . F 4 HOH 46 287 287 HOH HOH A . F 4 HOH 47 289 289 HOH HOH A . F 4 HOH 48 290 290 HOH HOH A . F 4 HOH 49 292 292 HOH HOH A . F 4 HOH 50 299 299 HOH HOH A . F 4 HOH 51 300 300 HOH HOH A . F 4 HOH 52 301 301 HOH HOH A . F 4 HOH 53 305 305 HOH HOH A . F 4 HOH 54 306 306 HOH HOH A . G 4 HOH 1 203 203 HOH HOH B . G 4 HOH 2 204 204 HOH HOH B . G 4 HOH 3 206 206 HOH HOH B . G 4 HOH 4 211 211 HOH HOH B . G 4 HOH 5 212 212 HOH HOH B . G 4 HOH 6 221 221 HOH HOH B . G 4 HOH 7 224 224 HOH HOH B . G 4 HOH 8 225 225 HOH HOH B . G 4 HOH 9 226 226 HOH HOH B . G 4 HOH 10 228 228 HOH HOH B . G 4 HOH 11 229 229 HOH HOH B . G 4 HOH 12 230 230 HOH HOH B . G 4 HOH 13 233 233 HOH HOH B . G 4 HOH 14 245 245 HOH HOH B . G 4 HOH 15 247 247 HOH HOH B . G 4 HOH 16 249 249 HOH HOH B . G 4 HOH 17 250 250 HOH HOH B . G 4 HOH 18 253 253 HOH HOH B . G 4 HOH 19 254 254 HOH HOH B . G 4 HOH 20 256 256 HOH HOH B . G 4 HOH 21 257 257 HOH HOH B . G 4 HOH 22 258 258 HOH HOH B . G 4 HOH 23 269 269 HOH HOH B . G 4 HOH 24 271 271 HOH HOH B . G 4 HOH 25 272 272 HOH HOH B . G 4 HOH 26 274 274 HOH HOH B . G 4 HOH 27 279 279 HOH HOH B . G 4 HOH 28 280 280 HOH HOH B . G 4 HOH 29 281 281 HOH HOH B . G 4 HOH 30 282 282 HOH HOH B . G 4 HOH 31 284 284 HOH HOH B . G 4 HOH 32 286 286 HOH HOH B . G 4 HOH 33 288 288 HOH HOH B . G 4 HOH 34 293 293 HOH HOH B . G 4 HOH 35 294 294 HOH HOH B . G 4 HOH 36 295 295 HOH HOH B . G 4 HOH 37 297 297 HOH HOH B . G 4 HOH 38 298 298 HOH HOH B . G 4 HOH 39 302 302 HOH HOH B . G 4 HOH 40 303 303 HOH HOH B . G 4 HOH 41 304 304 HOH HOH B . H 4 HOH 1 201 201 HOH HOH C . H 4 HOH 2 209 209 HOH HOH C . H 4 HOH 3 217 217 HOH HOH C . H 4 HOH 4 227 227 HOH HOH C . H 4 HOH 5 231 231 HOH HOH C . H 4 HOH 6 246 246 HOH HOH C . H 4 HOH 7 267 267 HOH HOH C . H 4 HOH 8 278 278 HOH HOH C . H 4 HOH 9 283 283 HOH HOH C . H 4 HOH 10 291 291 HOH HOH C . H 4 HOH 11 296 296 HOH HOH C . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 26 ? CG ? A ARG 26 CG 2 1 Y 1 A ARG 26 ? CD ? A ARG 26 CD 3 1 Y 1 A ARG 26 ? NE ? A ARG 26 NE 4 1 Y 1 A ARG 26 ? CZ ? A ARG 26 CZ 5 1 Y 1 A ARG 26 ? NH1 ? A ARG 26 NH1 6 1 Y 1 A ARG 26 ? NH2 ? A ARG 26 NH2 7 1 Y 1 A LYS 70 ? CG ? A LYS 70 CG 8 1 Y 1 A LYS 70 ? CD ? A LYS 70 CD 9 1 Y 1 A LYS 70 ? CE ? A LYS 70 CE 10 1 Y 1 A LYS 70 ? NZ ? A LYS 70 NZ 11 1 Y 1 B GLU 55 ? CG ? B GLU 55 CG 12 1 Y 1 B GLU 55 ? CD ? B GLU 55 CD 13 1 Y 1 B GLU 55 ? OE1 ? B GLU 55 OE1 14 1 Y 1 B GLU 55 ? OE2 ? B GLU 55 OE2 15 1 Y 1 B GLU 63 ? CG ? B GLU 63 CG 16 1 Y 1 B GLU 63 ? CD ? B GLU 63 CD 17 1 Y 1 B GLU 63 ? OE1 ? B GLU 63 OE1 18 1 Y 1 B GLU 63 ? OE2 ? B GLU 63 OE2 19 1 Y 1 C LYS 8 ? CG ? C LYS 8 CG 20 1 Y 1 C LYS 8 ? CD ? C LYS 8 CD 21 1 Y 1 C LYS 8 ? CE ? C LYS 8 CE 22 1 Y 1 C LYS 8 ? NZ ? C LYS 8 NZ 23 1 Y 1 C GLU 11 ? CG ? C GLU 11 CG 24 1 Y 1 C GLU 11 ? CD ? C GLU 11 CD 25 1 Y 1 C GLU 11 ? OE1 ? C GLU 11 OE1 26 1 Y 1 C GLU 11 ? OE2 ? C GLU 11 OE2 27 1 Y 1 C LEU 32 ? CG ? C LEU 32 CG 28 1 Y 1 C LEU 32 ? CD1 ? C LEU 32 CD1 29 1 Y 1 C LEU 32 ? CD2 ? C LEU 32 CD2 30 1 Y 1 C MET 33 ? CG ? C MET 33 CG 31 1 Y 1 C MET 33 ? SD ? C MET 33 SD 32 1 Y 1 C MET 33 ? CE ? C MET 33 CE 33 1 Y 1 C ASP 35 ? CG ? C ASP 35 CG 34 1 Y 1 C ASP 35 ? OD1 ? C ASP 35 OD1 35 1 Y 1 C ASP 35 ? OD2 ? C ASP 35 OD2 36 1 Y 1 C LYS 37 ? CG ? C LYS 37 CG 37 1 Y 1 C LYS 37 ? CD ? C LYS 37 CD 38 1 Y 1 C LYS 37 ? CE ? C LYS 37 CE 39 1 Y 1 C LYS 37 ? NZ ? C LYS 37 NZ 40 1 Y 1 C ASP 40 ? CG ? C ASP 40 CG 41 1 Y 1 C ASP 40 ? OD1 ? C ASP 40 OD1 42 1 Y 1 C ASP 40 ? OD2 ? C ASP 40 OD2 43 1 Y 1 C PHE 48 ? CG ? C PHE 48 CG 44 1 Y 1 C PHE 48 ? CD1 ? C PHE 48 CD1 45 1 Y 1 C PHE 48 ? CD2 ? C PHE 48 CD2 46 1 Y 1 C PHE 48 ? CE1 ? C PHE 48 CE1 47 1 Y 1 C PHE 48 ? CE2 ? C PHE 48 CE2 48 1 Y 1 C PHE 48 ? CZ ? C PHE 48 CZ 49 1 Y 1 C LEU 53 ? CG ? C LEU 53 CG 50 1 Y 1 C LEU 53 ? CD1 ? C LEU 53 CD1 51 1 Y 1 C LEU 53 ? CD2 ? C LEU 53 CD2 52 1 Y 1 C ASP 54 ? CG ? C ASP 54 CG 53 1 Y 1 C ASP 54 ? OD1 ? C ASP 54 OD1 54 1 Y 1 C ASP 54 ? OD2 ? C ASP 54 OD2 55 1 Y 1 C GLU 55 ? CG ? C GLU 55 CG 56 1 Y 1 C GLU 55 ? CD ? C GLU 55 CD 57 1 Y 1 C GLU 55 ? OE1 ? C GLU 55 OE1 58 1 Y 1 C GLU 55 ? OE2 ? C GLU 55 OE2 59 1 Y 1 C LYS 56 ? CG ? C LYS 56 CG 60 1 Y 1 C LYS 56 ? CD ? C LYS 56 CD 61 1 Y 1 C LYS 56 ? CE ? C LYS 56 CE 62 1 Y 1 C LYS 56 ? NZ ? C LYS 56 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 SOLVE phasing . ? 5 # _cell.entry_id 2Z1C _cell.length_a 78.237 _cell.length_b 59.130 _cell.length_c 53.973 _cell.angle_alpha 90.00 _cell.angle_beta 109.01 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2Z1C _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2Z1C _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_percent_sol 48.30 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_details '0.1M citrate acid, pH 4.3-4.5, 100-600mM NaBr, 17-20% PEG4000, 20% Glycerol, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2003-10-28 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NW12A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline AR-NW12A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 2Z1C _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_high 1.8 _reflns.d_resolution_low 50 _reflns.number_all ? _reflns.number_obs 21035 _reflns.percent_possible_obs 97.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.035 _reflns.pdbx_netI_over_sigmaI 31.3 _reflns.B_iso_Wilson_estimate 31.7 _reflns.pdbx_redundancy 3.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_all 93.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.213 _reflns_shell.meanI_over_sigI_obs 4.3 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2Z1C _refine.ls_number_reflns_obs 21030 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 46.18 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 97.06 _refine.ls_R_factor_obs 0.223 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.222 _refine.ls_R_factor_R_free 0.246 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1045 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.939 _refine.correlation_coeff_Fo_to_Fc_free 0.929 _refine.B_iso_mean 48.431 _refine.aniso_B[1][1] -0.98 _refine.aniso_B[2][2] 2.52 _refine.aniso_B[3][3] -1.16 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.57 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIRAS _refine.pdbx_isotropic_thermal_model isotropic _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.149 _refine.pdbx_overall_ESU_R_Free 0.134 _refine.overall_SU_ML 0.096 _refine.overall_SU_B 6.145 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1601 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 19 _refine_hist.number_atoms_solvent 106 _refine_hist.number_atoms_total 1726 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 46.18 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.022 ? 1647 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.331 1.975 ? 2229 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.110 5.000 ? 211 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.404 25.517 ? 58 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.608 15.000 ? 269 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11.393 15.000 ? 5 'X-RAY DIFFRACTION' ? r_chiral_restr 0.085 0.200 ? 260 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1200 'X-RAY DIFFRACTION' ? r_nbd_refined 0.210 0.200 ? 725 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.307 0.200 ? 1110 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.130 0.200 ? 104 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.204 0.200 ? 54 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.183 0.200 ? 14 'X-RAY DIFFRACTION' ? r_mcbond_it 0.749 1.500 ? 1087 'X-RAY DIFFRACTION' ? r_mcangle_it 1.220 2.000 ? 1706 'X-RAY DIFFRACTION' ? r_scbond_it 2.268 3.000 ? 629 'X-RAY DIFFRACTION' ? r_scangle_it 3.700 4.500 ? 523 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.number_reflns_R_work 1380 _refine_ls_shell.R_factor_R_work 0.234 _refine_ls_shell.percent_reflns_obs 93.15 _refine_ls_shell.R_factor_R_free 0.269 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 74 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2Z1C _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2Z1C _struct.title 'Crystal structure of HypC from Thermococcus kodakaraensis KOD1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2Z1C _struct_keywords.pdbx_keywords 'CHAPERONE, METAL BINDING PROTEIN' _struct_keywords.text '[NiFe] hydrogenase maturation, OB-fold, CHAPERONE, METAL BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5JII0_PYRKO _struct_ref.pdbx_db_accession Q5JII0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MCLAVPGKVIEVNGPVAVVDFGGVKREVRLDLMPDTKPGDWVIVHTGFAIEKLDEKKAMEILEAWAEVEKAMEGF _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2Z1C A 1 ? 75 ? Q5JII0 1 ? 75 ? 1 75 2 1 2Z1C B 1 ? 75 ? Q5JII0 1 ? 75 ? 1 75 3 1 2Z1C C 1 ? 75 ? Q5JII0 1 ? 75 ? 1 75 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,D,F 2 1 B,E,G 3 1 C,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 54 ? MET A 72 ? ASP A 54 MET A 72 1 ? 19 HELX_P HELX_P2 2 ASP B 54 ? GLY B 74 ? ASP B 54 GLY B 74 1 ? 21 HELX_P HELX_P3 3 ASP C 54 ? GLU C 73 ? ASP C 54 GLU C 73 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 12 ? B ? 4 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 7 ? ASN A 13 ? GLY A 7 ASN A 13 A 2 VAL A 16 ? PHE A 21 ? VAL A 16 PHE A 21 A 3 VAL A 24 ? ARG A 29 ? VAL A 24 ARG A 29 A 4 PHE A 48 ? LEU A 53 ? PHE A 48 LEU A 53 A 5 TRP A 41 ? HIS A 45 ? TRP A 41 HIS A 45 A 6 GLY A 7 ? ASN A 13 ? GLY A 7 ASN A 13 A 7 VAL B 24 ? ARG B 29 ? VAL B 24 ARG B 29 A 8 PHE B 48 ? LEU B 53 ? PHE B 48 LEU B 53 A 9 TRP B 41 ? HIS B 45 ? TRP B 41 HIS B 45 A 10 GLY B 7 ? ASN B 13 ? GLY B 7 ASN B 13 A 11 VAL B 16 ? PHE B 21 ? VAL B 16 PHE B 21 A 12 VAL B 24 ? ARG B 29 ? VAL B 24 ARG B 29 B 1 VAL C 24 ? ARG C 29 ? VAL C 24 ARG C 29 B 2 VAL C 16 ? PHE C 21 ? VAL C 16 PHE C 21 B 3 GLY C 7 ? ASN C 13 ? GLY C 7 ASN C 13 B 4 TRP C 41 ? VAL C 42 ? TRP C 41 VAL C 42 C 1 VAL C 44 ? HIS C 45 ? VAL C 44 HIS C 45 C 2 PHE C 48 ? ALA C 49 ? PHE C 48 ALA C 49 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASN A 13 ? N ASN A 13 O VAL A 16 ? O VAL A 16 A 2 3 N ALA A 17 ? N ALA A 17 O VAL A 28 ? O VAL A 28 A 3 4 N ARG A 29 ? N ARG A 29 O ALA A 49 ? O ALA A 49 A 4 5 O LEU A 53 ? O LEU A 53 N TRP A 41 ? N TRP A 41 A 5 6 O VAL A 42 ? O VAL A 42 N GLY A 7 ? N GLY A 7 A 6 7 N VAL A 12 ? N VAL A 12 O LYS B 25 ? O LYS B 25 A 7 8 N ARG B 29 ? N ARG B 29 O ALA B 49 ? O ALA B 49 A 8 9 O ILE B 50 ? O ILE B 50 N ILE B 43 ? N ILE B 43 A 9 10 O VAL B 42 ? O VAL B 42 N GLY B 7 ? N GLY B 7 A 10 11 N LYS B 8 ? N LYS B 8 O ASP B 20 ? O ASP B 20 A 11 12 N PHE B 21 ? N PHE B 21 O VAL B 24 ? O VAL B 24 B 1 2 O VAL C 28 ? O VAL C 28 N ALA C 17 ? N ALA C 17 B 2 3 O VAL C 16 ? O VAL C 16 N ASN C 13 ? N ASN C 13 B 3 4 N GLY C 7 ? N GLY C 7 O VAL C 42 ? O VAL C 42 C 1 2 N HIS C 45 ? N HIS C 45 O PHE C 48 ? O PHE C 48 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B PG4 502 ? 9 'BINDING SITE FOR RESIDUE PG4 B 502' AC2 Software A GOL 901 ? 9 'BINDING SITE FOR RESIDUE GOL A 901' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 GLY B 22 ? GLY B 22 . ? 1_555 ? 2 AC1 9 GLU B 69 ? GLU B 69 . ? 1_555 ? 3 AC1 9 MET B 72 ? MET B 72 . ? 1_555 ? 4 AC1 9 GLU B 73 ? GLU B 73 . ? 1_555 ? 5 AC1 9 HOH G . ? HOH B 293 . ? 1_555 ? 6 AC1 9 TRP C 65 ? TRP C 65 . ? 1_555 ? 7 AC1 9 GLU C 69 ? GLU C 69 . ? 1_555 ? 8 AC1 9 MET C 72 ? MET C 72 . ? 1_555 ? 9 AC1 9 GLU C 73 ? GLU C 73 . ? 1_555 ? 10 AC2 9 GLU A 11 ? GLU A 11 . ? 1_555 ? 11 AC2 9 ASN A 13 ? ASN A 13 . ? 1_555 ? 12 AC2 9 VAL A 16 ? VAL A 16 . ? 1_555 ? 13 AC2 9 ALA A 17 ? ALA A 17 . ? 1_555 ? 14 AC2 9 VAL A 18 ? VAL A 18 . ? 1_555 ? 15 AC2 9 GLU A 27 ? GLU A 27 . ? 1_555 ? 16 AC2 9 HOH F . ? HOH A 213 . ? 1_555 ? 17 AC2 9 HOH F . ? HOH A 263 . ? 1_555 ? 18 AC2 9 GLU C 63 ? GLU C 63 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD C GLU 60 ? ? OE1 C GLU 60 ? ? 1.323 1.252 0.071 0.011 N 2 1 CD C GLU 60 ? ? OE2 C GLU 60 ? ? 1.321 1.252 0.069 0.011 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN C 13 ? ? -118.78 60.85 2 1 THR C 46 ? ? 47.79 26.34 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 235 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 24.8681 8.3700 35.8536 -0.1618 -0.2289 -0.2506 0.0706 -0.0277 0.0022 5.0510 3.0967 5.8446 -2.6275 -2.0812 0.7008 -0.0437 -0.0392 -0.2644 0.0544 -0.1593 0.0096 0.3890 0.4216 0.2030 'X-RAY DIFFRACTION' 2 ? refined 11.4826 29.8777 30.7015 -0.1776 -0.2655 -0.1636 0.0111 -0.0491 0.0411 11.1879 4.9150 4.3541 -4.4656 1.0008 -1.8564 -0.3554 0.0912 0.6165 0.2889 0.0525 -0.5431 -0.3755 0.2346 0.3028 'X-RAY DIFFRACTION' 3 ? refined -5.3717 20.5817 51.8628 0.3779 0.7643 0.1148 0.4519 0.2368 0.6533 16.9249 12.2695 18.1589 -2.2908 -8.5231 7.4772 -0.9975 -3.0185 -1.0579 1.6123 0.2268 0.2281 1.2010 0.7803 0.7707 'X-RAY DIFFRACTION' 4 ? refined 2.4745 14.9793 35.5922 -0.1066 -0.0716 0.3633 0.0317 0.0665 0.3064 18.1931 15.8413 12.5089 3.2311 -6.1957 -9.9815 -0.1617 -1.6843 -2.4582 0.4868 0.4297 1.2608 0.5240 -0.1522 -0.2679 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 3 A 3 A 72 A 72 ? 'X-RAY DIFFRACTION' ? 2 2 B 2 B 2 B 75 B 75 ? 'X-RAY DIFFRACTION' ? 3 3 C 3 C 3 C 51 C 51 ? 'X-RAY DIFFRACTION' ? 4 4 C 53 C 53 C 75 C 75 ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLU 73 ? A GLU 73 3 1 Y 1 A GLY 74 ? A GLY 74 4 1 Y 1 A PHE 75 ? A PHE 75 5 1 Y 1 B MET 1 ? B MET 1 6 1 Y 1 C MET 1 ? C MET 1 7 1 Y 1 C CYS 2 ? C CYS 2 8 1 Y 1 C PRO 38 ? C PRO 38 9 1 Y 1 C LYS 52 ? C LYS 52 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLU N N N N 88 GLU CA C N S 89 GLU C C N N 90 GLU O O N N 91 GLU CB C N N 92 GLU CG C N N 93 GLU CD C N N 94 GLU OE1 O N N 95 GLU OE2 O N N 96 GLU OXT O N N 97 GLU H H N N 98 GLU H2 H N N 99 GLU HA H N N 100 GLU HB2 H N N 101 GLU HB3 H N N 102 GLU HG2 H N N 103 GLU HG3 H N N 104 GLU HE2 H N N 105 GLU HXT H N N 106 GLY N N N N 107 GLY CA C N N 108 GLY C C N N 109 GLY O O N N 110 GLY OXT O N N 111 GLY H H N N 112 GLY H2 H N N 113 GLY HA2 H N N 114 GLY HA3 H N N 115 GLY HXT H N N 116 GOL C1 C N N 117 GOL O1 O N N 118 GOL C2 C N N 119 GOL O2 O N N 120 GOL C3 C N N 121 GOL O3 O N N 122 GOL H11 H N N 123 GOL H12 H N N 124 GOL HO1 H N N 125 GOL H2 H N N 126 GOL HO2 H N N 127 GOL H31 H N N 128 GOL H32 H N N 129 GOL HO3 H N N 130 HIS N N N N 131 HIS CA C N S 132 HIS C C N N 133 HIS O O N N 134 HIS CB C N N 135 HIS CG C Y N 136 HIS ND1 N Y N 137 HIS CD2 C Y N 138 HIS CE1 C Y N 139 HIS NE2 N Y N 140 HIS OXT O N N 141 HIS H H N N 142 HIS H2 H N N 143 HIS HA H N N 144 HIS HB2 H N N 145 HIS HB3 H N N 146 HIS HD1 H N N 147 HIS HD2 H N N 148 HIS HE1 H N N 149 HIS HE2 H N N 150 HIS HXT H N N 151 HOH O O N N 152 HOH H1 H N N 153 HOH H2 H N N 154 ILE N N N N 155 ILE CA C N S 156 ILE C C N N 157 ILE O O N N 158 ILE CB C N S 159 ILE CG1 C N N 160 ILE CG2 C N N 161 ILE CD1 C N N 162 ILE OXT O N N 163 ILE H H N N 164 ILE H2 H N N 165 ILE HA H N N 166 ILE HB H N N 167 ILE HG12 H N N 168 ILE HG13 H N N 169 ILE HG21 H N N 170 ILE HG22 H N N 171 ILE HG23 H N N 172 ILE HD11 H N N 173 ILE HD12 H N N 174 ILE HD13 H N N 175 ILE HXT H N N 176 LEU N N N N 177 LEU CA C N S 178 LEU C C N N 179 LEU O O N N 180 LEU CB C N N 181 LEU CG C N N 182 LEU CD1 C N N 183 LEU CD2 C N N 184 LEU OXT O N N 185 LEU H H N N 186 LEU H2 H N N 187 LEU HA H N N 188 LEU HB2 H N N 189 LEU HB3 H N N 190 LEU HG H N N 191 LEU HD11 H N N 192 LEU HD12 H N N 193 LEU HD13 H N N 194 LEU HD21 H N N 195 LEU HD22 H N N 196 LEU HD23 H N N 197 LEU HXT H N N 198 LYS N N N N 199 LYS CA C N S 200 LYS C C N N 201 LYS O O N N 202 LYS CB C N N 203 LYS CG C N N 204 LYS CD C N N 205 LYS CE C N N 206 LYS NZ N N N 207 LYS OXT O N N 208 LYS H H N N 209 LYS H2 H N N 210 LYS HA H N N 211 LYS HB2 H N N 212 LYS HB3 H N N 213 LYS HG2 H N N 214 LYS HG3 H N N 215 LYS HD2 H N N 216 LYS HD3 H N N 217 LYS HE2 H N N 218 LYS HE3 H N N 219 LYS HZ1 H N N 220 LYS HZ2 H N N 221 LYS HZ3 H N N 222 LYS HXT H N N 223 MET N N N N 224 MET CA C N S 225 MET C C N N 226 MET O O N N 227 MET CB C N N 228 MET CG C N N 229 MET SD S N N 230 MET CE C N N 231 MET OXT O N N 232 MET H H N N 233 MET H2 H N N 234 MET HA H N N 235 MET HB2 H N N 236 MET HB3 H N N 237 MET HG2 H N N 238 MET HG3 H N N 239 MET HE1 H N N 240 MET HE2 H N N 241 MET HE3 H N N 242 MET HXT H N N 243 PG4 O1 O N N 244 PG4 C1 C N N 245 PG4 C2 C N N 246 PG4 O2 O N N 247 PG4 C3 C N N 248 PG4 C4 C N N 249 PG4 O3 O N N 250 PG4 C5 C N N 251 PG4 C6 C N N 252 PG4 O4 O N N 253 PG4 C7 C N N 254 PG4 C8 C N N 255 PG4 O5 O N N 256 PG4 HO1 H N N 257 PG4 H11 H N N 258 PG4 H12 H N N 259 PG4 H21 H N N 260 PG4 H22 H N N 261 PG4 H31 H N N 262 PG4 H32 H N N 263 PG4 H41 H N N 264 PG4 H42 H N N 265 PG4 H51 H N N 266 PG4 H52 H N N 267 PG4 H61 H N N 268 PG4 H62 H N N 269 PG4 H71 H N N 270 PG4 H72 H N N 271 PG4 H81 H N N 272 PG4 H82 H N N 273 PG4 HO5 H N N 274 PHE N N N N 275 PHE CA C N S 276 PHE C C N N 277 PHE O O N N 278 PHE CB C N N 279 PHE CG C Y N 280 PHE CD1 C Y N 281 PHE CD2 C Y N 282 PHE CE1 C Y N 283 PHE CE2 C Y N 284 PHE CZ C Y N 285 PHE OXT O N N 286 PHE H H N N 287 PHE H2 H N N 288 PHE HA H N N 289 PHE HB2 H N N 290 PHE HB3 H N N 291 PHE HD1 H N N 292 PHE HD2 H N N 293 PHE HE1 H N N 294 PHE HE2 H N N 295 PHE HZ H N N 296 PHE HXT H N N 297 PRO N N N N 298 PRO CA C N S 299 PRO C C N N 300 PRO O O N N 301 PRO CB C N N 302 PRO CG C N N 303 PRO CD C N N 304 PRO OXT O N N 305 PRO H H N N 306 PRO HA H N N 307 PRO HB2 H N N 308 PRO HB3 H N N 309 PRO HG2 H N N 310 PRO HG3 H N N 311 PRO HD2 H N N 312 PRO HD3 H N N 313 PRO HXT H N N 314 THR N N N N 315 THR CA C N S 316 THR C C N N 317 THR O O N N 318 THR CB C N R 319 THR OG1 O N N 320 THR CG2 C N N 321 THR OXT O N N 322 THR H H N N 323 THR H2 H N N 324 THR HA H N N 325 THR HB H N N 326 THR HG1 H N N 327 THR HG21 H N N 328 THR HG22 H N N 329 THR HG23 H N N 330 THR HXT H N N 331 TRP N N N N 332 TRP CA C N S 333 TRP C C N N 334 TRP O O N N 335 TRP CB C N N 336 TRP CG C Y N 337 TRP CD1 C Y N 338 TRP CD2 C Y N 339 TRP NE1 N Y N 340 TRP CE2 C Y N 341 TRP CE3 C Y N 342 TRP CZ2 C Y N 343 TRP CZ3 C Y N 344 TRP CH2 C Y N 345 TRP OXT O N N 346 TRP H H N N 347 TRP H2 H N N 348 TRP HA H N N 349 TRP HB2 H N N 350 TRP HB3 H N N 351 TRP HD1 H N N 352 TRP HE1 H N N 353 TRP HE3 H N N 354 TRP HZ2 H N N 355 TRP HZ3 H N N 356 TRP HH2 H N N 357 TRP HXT H N N 358 VAL N N N N 359 VAL CA C N S 360 VAL C C N N 361 VAL O O N N 362 VAL CB C N N 363 VAL CG1 C N N 364 VAL CG2 C N N 365 VAL OXT O N N 366 VAL H H N N 367 VAL H2 H N N 368 VAL HA H N N 369 VAL HB H N N 370 VAL HG11 H N N 371 VAL HG12 H N N 372 VAL HG13 H N N 373 VAL HG21 H N N 374 VAL HG22 H N N 375 VAL HG23 H N N 376 VAL HXT H N N 377 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLU N CA sing N N 83 GLU N H sing N N 84 GLU N H2 sing N N 85 GLU CA C sing N N 86 GLU CA CB sing N N 87 GLU CA HA sing N N 88 GLU C O doub N N 89 GLU C OXT sing N N 90 GLU CB CG sing N N 91 GLU CB HB2 sing N N 92 GLU CB HB3 sing N N 93 GLU CG CD sing N N 94 GLU CG HG2 sing N N 95 GLU CG HG3 sing N N 96 GLU CD OE1 doub N N 97 GLU CD OE2 sing N N 98 GLU OE2 HE2 sing N N 99 GLU OXT HXT sing N N 100 GLY N CA sing N N 101 GLY N H sing N N 102 GLY N H2 sing N N 103 GLY CA C sing N N 104 GLY CA HA2 sing N N 105 GLY CA HA3 sing N N 106 GLY C O doub N N 107 GLY C OXT sing N N 108 GLY OXT HXT sing N N 109 GOL C1 O1 sing N N 110 GOL C1 C2 sing N N 111 GOL C1 H11 sing N N 112 GOL C1 H12 sing N N 113 GOL O1 HO1 sing N N 114 GOL C2 O2 sing N N 115 GOL C2 C3 sing N N 116 GOL C2 H2 sing N N 117 GOL O2 HO2 sing N N 118 GOL C3 O3 sing N N 119 GOL C3 H31 sing N N 120 GOL C3 H32 sing N N 121 GOL O3 HO3 sing N N 122 HIS N CA sing N N 123 HIS N H sing N N 124 HIS N H2 sing N N 125 HIS CA C sing N N 126 HIS CA CB sing N N 127 HIS CA HA sing N N 128 HIS C O doub N N 129 HIS C OXT sing N N 130 HIS CB CG sing N N 131 HIS CB HB2 sing N N 132 HIS CB HB3 sing N N 133 HIS CG ND1 sing Y N 134 HIS CG CD2 doub Y N 135 HIS ND1 CE1 doub Y N 136 HIS ND1 HD1 sing N N 137 HIS CD2 NE2 sing Y N 138 HIS CD2 HD2 sing N N 139 HIS CE1 NE2 sing Y N 140 HIS CE1 HE1 sing N N 141 HIS NE2 HE2 sing N N 142 HIS OXT HXT sing N N 143 HOH O H1 sing N N 144 HOH O H2 sing N N 145 ILE N CA sing N N 146 ILE N H sing N N 147 ILE N H2 sing N N 148 ILE CA C sing N N 149 ILE CA CB sing N N 150 ILE CA HA sing N N 151 ILE C O doub N N 152 ILE C OXT sing N N 153 ILE CB CG1 sing N N 154 ILE CB CG2 sing N N 155 ILE CB HB sing N N 156 ILE CG1 CD1 sing N N 157 ILE CG1 HG12 sing N N 158 ILE CG1 HG13 sing N N 159 ILE CG2 HG21 sing N N 160 ILE CG2 HG22 sing N N 161 ILE CG2 HG23 sing N N 162 ILE CD1 HD11 sing N N 163 ILE CD1 HD12 sing N N 164 ILE CD1 HD13 sing N N 165 ILE OXT HXT sing N N 166 LEU N CA sing N N 167 LEU N H sing N N 168 LEU N H2 sing N N 169 LEU CA C sing N N 170 LEU CA CB sing N N 171 LEU CA HA sing N N 172 LEU C O doub N N 173 LEU C OXT sing N N 174 LEU CB CG sing N N 175 LEU CB HB2 sing N N 176 LEU CB HB3 sing N N 177 LEU CG CD1 sing N N 178 LEU CG CD2 sing N N 179 LEU CG HG sing N N 180 LEU CD1 HD11 sing N N 181 LEU CD1 HD12 sing N N 182 LEU CD1 HD13 sing N N 183 LEU CD2 HD21 sing N N 184 LEU CD2 HD22 sing N N 185 LEU CD2 HD23 sing N N 186 LEU OXT HXT sing N N 187 LYS N CA sing N N 188 LYS N H sing N N 189 LYS N H2 sing N N 190 LYS CA C sing N N 191 LYS CA CB sing N N 192 LYS CA HA sing N N 193 LYS C O doub N N 194 LYS C OXT sing N N 195 LYS CB CG sing N N 196 LYS CB HB2 sing N N 197 LYS CB HB3 sing N N 198 LYS CG CD sing N N 199 LYS CG HG2 sing N N 200 LYS CG HG3 sing N N 201 LYS CD CE sing N N 202 LYS CD HD2 sing N N 203 LYS CD HD3 sing N N 204 LYS CE NZ sing N N 205 LYS CE HE2 sing N N 206 LYS CE HE3 sing N N 207 LYS NZ HZ1 sing N N 208 LYS NZ HZ2 sing N N 209 LYS NZ HZ3 sing N N 210 LYS OXT HXT sing N N 211 MET N CA sing N N 212 MET N H sing N N 213 MET N H2 sing N N 214 MET CA C sing N N 215 MET CA CB sing N N 216 MET CA HA sing N N 217 MET C O doub N N 218 MET C OXT sing N N 219 MET CB CG sing N N 220 MET CB HB2 sing N N 221 MET CB HB3 sing N N 222 MET CG SD sing N N 223 MET CG HG2 sing N N 224 MET CG HG3 sing N N 225 MET SD CE sing N N 226 MET CE HE1 sing N N 227 MET CE HE2 sing N N 228 MET CE HE3 sing N N 229 MET OXT HXT sing N N 230 PG4 O1 C1 sing N N 231 PG4 O1 HO1 sing N N 232 PG4 C1 C2 sing N N 233 PG4 C1 H11 sing N N 234 PG4 C1 H12 sing N N 235 PG4 C2 O2 sing N N 236 PG4 C2 H21 sing N N 237 PG4 C2 H22 sing N N 238 PG4 O2 C3 sing N N 239 PG4 C3 C4 sing N N 240 PG4 C3 H31 sing N N 241 PG4 C3 H32 sing N N 242 PG4 C4 O3 sing N N 243 PG4 C4 H41 sing N N 244 PG4 C4 H42 sing N N 245 PG4 O3 C5 sing N N 246 PG4 C5 C6 sing N N 247 PG4 C5 H51 sing N N 248 PG4 C5 H52 sing N N 249 PG4 C6 O4 sing N N 250 PG4 C6 H61 sing N N 251 PG4 C6 H62 sing N N 252 PG4 O4 C7 sing N N 253 PG4 C7 C8 sing N N 254 PG4 C7 H71 sing N N 255 PG4 C7 H72 sing N N 256 PG4 C8 O5 sing N N 257 PG4 C8 H81 sing N N 258 PG4 C8 H82 sing N N 259 PG4 O5 HO5 sing N N 260 PHE N CA sing N N 261 PHE N H sing N N 262 PHE N H2 sing N N 263 PHE CA C sing N N 264 PHE CA CB sing N N 265 PHE CA HA sing N N 266 PHE C O doub N N 267 PHE C OXT sing N N 268 PHE CB CG sing N N 269 PHE CB HB2 sing N N 270 PHE CB HB3 sing N N 271 PHE CG CD1 doub Y N 272 PHE CG CD2 sing Y N 273 PHE CD1 CE1 sing Y N 274 PHE CD1 HD1 sing N N 275 PHE CD2 CE2 doub Y N 276 PHE CD2 HD2 sing N N 277 PHE CE1 CZ doub Y N 278 PHE CE1 HE1 sing N N 279 PHE CE2 CZ sing Y N 280 PHE CE2 HE2 sing N N 281 PHE CZ HZ sing N N 282 PHE OXT HXT sing N N 283 PRO N CA sing N N 284 PRO N CD sing N N 285 PRO N H sing N N 286 PRO CA C sing N N 287 PRO CA CB sing N N 288 PRO CA HA sing N N 289 PRO C O doub N N 290 PRO C OXT sing N N 291 PRO CB CG sing N N 292 PRO CB HB2 sing N N 293 PRO CB HB3 sing N N 294 PRO CG CD sing N N 295 PRO CG HG2 sing N N 296 PRO CG HG3 sing N N 297 PRO CD HD2 sing N N 298 PRO CD HD3 sing N N 299 PRO OXT HXT sing N N 300 THR N CA sing N N 301 THR N H sing N N 302 THR N H2 sing N N 303 THR CA C sing N N 304 THR CA CB sing N N 305 THR CA HA sing N N 306 THR C O doub N N 307 THR C OXT sing N N 308 THR CB OG1 sing N N 309 THR CB CG2 sing N N 310 THR CB HB sing N N 311 THR OG1 HG1 sing N N 312 THR CG2 HG21 sing N N 313 THR CG2 HG22 sing N N 314 THR CG2 HG23 sing N N 315 THR OXT HXT sing N N 316 TRP N CA sing N N 317 TRP N H sing N N 318 TRP N H2 sing N N 319 TRP CA C sing N N 320 TRP CA CB sing N N 321 TRP CA HA sing N N 322 TRP C O doub N N 323 TRP C OXT sing N N 324 TRP CB CG sing N N 325 TRP CB HB2 sing N N 326 TRP CB HB3 sing N N 327 TRP CG CD1 doub Y N 328 TRP CG CD2 sing Y N 329 TRP CD1 NE1 sing Y N 330 TRP CD1 HD1 sing N N 331 TRP CD2 CE2 doub Y N 332 TRP CD2 CE3 sing Y N 333 TRP NE1 CE2 sing Y N 334 TRP NE1 HE1 sing N N 335 TRP CE2 CZ2 sing Y N 336 TRP CE3 CZ3 doub Y N 337 TRP CE3 HE3 sing N N 338 TRP CZ2 CH2 doub Y N 339 TRP CZ2 HZ2 sing N N 340 TRP CZ3 CH2 sing Y N 341 TRP CZ3 HZ3 sing N N 342 TRP CH2 HH2 sing N N 343 TRP OXT HXT sing N N 344 VAL N CA sing N N 345 VAL N H sing N N 346 VAL N H2 sing N N 347 VAL CA C sing N N 348 VAL CA CB sing N N 349 VAL CA HA sing N N 350 VAL C O doub N N 351 VAL C OXT sing N N 352 VAL CB CG1 sing N N 353 VAL CB CG2 sing N N 354 VAL CB HB sing N N 355 VAL CG1 HG11 sing N N 356 VAL CG1 HG12 sing N N 357 VAL CG1 HG13 sing N N 358 VAL CG2 HG21 sing N N 359 VAL CG2 HG22 sing N N 360 VAL CG2 HG23 sing N N 361 VAL OXT HXT sing N N 362 # _atom_sites.entry_id 2Z1C _atom_sites.fract_transf_matrix[1][1] 0.012782 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004405 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016912 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019597 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_