HEADER PEPTIDE BINDING PROTEIN 17-MAY-07 2Z23 TITLE CRYSTAL STRUCTURE OF Y.PESTIS OLIGO PEPTIDE BINDING PROTEIN OPPA WITH TITLE 2 TRI-LYSINE LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1-517; COMPND 5 SYNONYM: OLIGO-PEPTIDE PERIPLASMIC BINDING PROTEIN OPPA; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PEPTIDE (LYS)(LYS)(LYS); COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA PESTIS; SOURCE 3 ORGANISM_TAXID: 214092; SOURCE 4 STRAIN: CO92; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET24A; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED KEYWDS ABC TRANSPORTER, PERIPLASMIC BINDING PROTEIN, OLIGOPEPTIDE, PEPTIDE KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.TANABE,T.BERTLAND,O.MIRZA,B.BYRNE,K.A.BROWN REVDAT 3 13-JUL-11 2Z23 1 VERSN REVDAT 2 24-FEB-09 2Z23 1 VERSN REVDAT 1 30-OCT-07 2Z23 0 JRNL AUTH M.TANABE,O.MIRZA,T.BERTRAND,H.S.ATKINS,R.W.TITBALL,S.IWATA, JRNL AUTH 2 K.A.BROWN,B.BYRNE JRNL TITL STRUCTURES OF OPPA AND PSTS FROM YERSINIA PESTIS INDICATE JRNL TITL 2 VARIABILITY OF INTERACTIONS WITH TRANSMEMBRANE DOMAINS. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 63 1185 2007 JRNL REFN ISSN 0907-4449 JRNL PMID 18007034 JRNL DOI 10.1107/S0907444907048299 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 71053 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RAMDOM REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4181 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 389 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.80 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2Z23 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-MAY-07. REMARK 100 THE RCSB ID CODE IS RCSB027423. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71053 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 32% (W/V) PEG 1500, 3% AMINO CAPROIC REMARK 280 ACID, PH 7.50, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.91350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.85100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.31850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.85100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.91350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.31850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 517 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB TYR A 109 CD2 LEU A 163 2.02 REMARK 500 OE1 GLU A 200 O HOH A 841 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 845 O HOH A 888 2565 1.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 22 CA GLU A 22 C -0.163 REMARK 500 PRO A 23 CA PRO A 23 C -0.234 REMARK 500 PRO A 103 CD PRO A 103 N -0.253 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 23 CA - C - O ANGL. DEV. = 18.5 DEGREES REMARK 500 GLU A 22 O - C - N ANGL. DEV. = -22.7 DEGREES REMARK 500 PRO A 23 C - N - CA ANGL. DEV. = 21.6 DEGREES REMARK 500 PRO A 23 C - N - CD ANGL. DEV. = -22.1 DEGREES REMARK 500 PRO A 23 O - C - N ANGL. DEV. = -27.7 DEGREES REMARK 500 PRO A 283 CA - N - CD ANGL. DEV. = -52.0 DEGREES REMARK 500 PRO A 283 CA - CB - CG ANGL. DEV. = -12.2 DEGREES REMARK 500 PRO A 283 C - N - CA ANGL. DEV. = 37.5 DEGREES REMARK 500 PRO A 283 C - N - CD ANGL. DEV. = -22.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 25 169.86 179.50 REMARK 500 GLU A 32 -9.39 -156.22 REMARK 500 ASP A 68 16.58 58.15 REMARK 500 ASN A 199 1.02 82.09 REMARK 500 GLU A 200 -53.47 -120.67 REMARK 500 PRO A 225 40.75 -101.90 REMARK 500 TYR A 236 -47.42 -144.16 REMARK 500 PRO A 283 -25.93 118.29 REMARK 500 SER A 368 147.81 179.79 REMARK 500 THR A 408 59.66 -91.97 REMARK 500 ASP A 410 -63.27 -103.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 PRO A 23 -13.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 663 DISTANCE = 5.23 ANGSTROMS REMARK 525 HOH A 689 DISTANCE = 5.35 ANGSTROMS REMARK 525 HOH A 708 DISTANCE = 5.07 ANGSTROMS REMARK 525 HOH A 744 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH A 747 DISTANCE = 5.15 ANGSTROMS REMARK 525 HOH A 758 DISTANCE = 5.14 ANGSTROMS REMARK 525 HOH A 843 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH A 855 DISTANCE = 5.04 ANGSTROMS REMARK 525 HOH A 866 DISTANCE = 5.02 ANGSTROMS REMARK 525 HOH A 867 DISTANCE = 5.19 ANGSTROMS REMARK 525 HOH A 901 DISTANCE = 5.15 ANGSTROMS DBREF 2Z23 A 1 517 UNP Q74TY5 Q74TY5_YERPE 29 545 DBREF 2Z23 B 1 3 PDB 2Z23 2Z23 1 3 SEQRES 1 A 517 ALA ASN VAL PRO THR GLY VAL GLN LEU ALA GLU LYS GLN SEQRES 2 A 517 VAL LEU VAL ARG ASN ASN GLY SER GLU PRO GLN SER LEU SEQRES 3 A 517 ASP PRO HIS LYS ILE GLU GLY VAL PRO GLU SER ASN ILE SEQRES 4 A 517 SER ARG ASP LEU LEU GLU GLY LEU VAL ILE ASN ASP PRO SEQRES 5 A 517 ASN GLY ASN ILE VAL PRO GLY ALA ALA GLU SER TRP ASP SEQRES 6 A 517 ASN LYS ASP PHE LYS VAL TRP THR PHE ASN ILE ARG LYS SEQRES 7 A 517 ASP ALA LYS TRP SER ASN GLY ASP PRO VAL THR ALA GLN SEQRES 8 A 517 ASP PHE VAL TYR SER TRP GLN ARG LEU ALA ASP PRO LYS SEQRES 9 A 517 THR VAL SER PRO TYR ALA SER TYR LEU GLN TYR ALA HIS SEQRES 10 A 517 LEU THR ASN ILE ASP ASP ILE ILE THR GLY LYS ALA ALA SEQRES 11 A 517 PRO ASP THR LEU GLY VAL LYS ALA LEU ASP ASP HIS THR SEQRES 12 A 517 LEU GLU VAL THR LEU SER GLU PRO VAL PRO TYR LEU ASP SEQRES 13 A 517 LYS LEU LEU ALA HIS PRO LEU MET SER PRO VAL ASN LYS SEQRES 14 A 517 THR VAL VAL GLU LYS PHE GLY GLU LYS TRP THR GLN PRO SEQRES 15 A 517 GLN ASN PHE VAL GLY ASN GLY ALA TYR LYS LEU LYS ASP SEQRES 16 A 517 TRP ILE VAL ASN GLU ARG ILE VAL LEU GLU ARG SER PRO SEQRES 17 A 517 THR TYR TRP ASP ASN ALA LYS THR VAL ILE ASN GLN VAL SEQRES 18 A 517 THR TYR LEU PRO ILE SER SER GLU VAL THR ASP VAL ASN SEQRES 19 A 517 ARG TYR ARG SER GLY GLU ILE ASP MET THR TYR ASN ASN SEQRES 20 A 517 MET PRO ILE GLU LEU PHE GLN LYS LEU LYS LYS GLU ILE SEQRES 21 A 517 PRO ASP GLN VAL HIS VAL ASP PRO TYR LEU CYS THR TYR SEQRES 22 A 517 TYR TYR GLU ILE ASN ASN GLN LYS ALA PRO PHE THR ASP SEQRES 23 A 517 ALA ARG VAL ARG GLU ALA LEU LYS LEU GLY MET ASP ARG SEQRES 24 A 517 ASP ILE ILE VAL ASN LYS VAL LYS ASN GLN GLY ASP LEU SEQRES 25 A 517 PRO ALA TYR GLY PHE THR PRO PRO TYR THR SER GLY ALA SEQRES 26 A 517 GLU LEU THR PRO PRO GLU TRP PHE SER TRP THR GLN GLU SEQRES 27 A 517 LYS ARG ASN GLU VAL ALA LYS LYS LEU LEU ALA GLU ALA SEQRES 28 A 517 GLY TYR THR LYS ASP ASN PRO LEU LYS PHE SER LEU LEU SEQRES 29 A 517 TYR ASN THR SER ASP LEU HIS LYS LYS LEU ALA ILE ALA SEQRES 30 A 517 ALA ALA SER ILE TRP LYS LYS ASN LEU GLY VAL ASP VAL SEQRES 31 A 517 LYS LEU GLU ASN GLN GLU TRP LYS THR PHE LEU ASP THR SEQRES 32 A 517 ARG HIS GLN GLY THR TYR ASP VAL ALA ARG ALA ALA TRP SEQRES 33 A 517 CYS ALA ASP TYR ASN GLU PRO SER SER PHE LEU ASN MET SEQRES 34 A 517 MET LEU SER ASN SER SER ASN ASN THR THR HIS TYR LYS SEQRES 35 A 517 SER SER VAL PHE ASP LYS LEU ILE GLU ASP THR LEU LYS SEQRES 36 A 517 VAL LYS SER GLU LYS GLU ARG ALA ASP LEU TYR GLN GLN SEQRES 37 A 517 ALA GLU ILE GLN LEU ASP LYS ASP SER ALA ILE VAL PRO SEQRES 38 A 517 VAL PHE TYR TYR VAL SER ALA ARG LEU VAL LYS PRO TYR SEQRES 39 A 517 VAL GLY GLY TYR THR GLY LYS ASP PRO LEU ASP ASN MET SEQRES 40 A 517 HIS VAL LYS ASP LEU TYR ILE ILE LYS GLN SEQRES 1 B 3 LYS LYS LYS FORMUL 3 HOH *389(H2 O) HELIX 1 1 ASP A 27 ILE A 31 5 5 HELIX 2 2 GLY A 33 LEU A 44 1 12 HELIX 3 3 THR A 89 ASP A 102 1 14 HELIX 4 4 PRO A 103 VAL A 106 5 4 HELIX 5 5 SER A 111 HIS A 117 1 7 HELIX 6 6 ASN A 120 THR A 126 1 7 HELIX 7 7 ALA A 130 LEU A 134 5 5 HELIX 8 8 TYR A 154 LEU A 159 1 6 HELIX 9 9 ALA A 160 SER A 165 5 6 HELIX 10 10 ASN A 168 GLY A 176 1 9 HELIX 11 11 GLU A 177 TRP A 179 5 3 HELIX 12 12 ASP A 212 THR A 216 5 5 HELIX 13 13 SER A 228 SER A 238 1 11 HELIX 14 14 LEU A 252 ILE A 260 1 9 HELIX 15 15 ASP A 286 MET A 297 1 12 HELIX 16 16 ASP A 298 LYS A 305 1 8 HELIX 17 17 PRO A 330 TRP A 335 1 6 HELIX 18 18 THR A 336 GLU A 350 1 15 HELIX 19 19 SER A 368 GLY A 387 1 20 HELIX 20 20 GLU A 396 GLY A 407 1 12 HELIX 21 21 PRO A 423 ASN A 428 1 6 HELIX 22 22 MET A 429 LEU A 431 5 3 HELIX 23 23 SER A 443 THR A 453 1 11 HELIX 24 24 SER A 458 SER A 477 1 20 HELIX 25 25 HIS A 508 LEU A 512 5 5 SHEET 1 A 4 VAL A 14 ASN A 18 0 SHEET 2 A 4 GLN A 220 LEU A 224 1 O THR A 222 N ARG A 17 SHEET 3 A 4 ARG A 201 ARG A 206 -1 N LEU A 204 O VAL A 221 SHEET 4 A 4 TYR A 191 ILE A 197 -1 N ASP A 195 O VAL A 203 SHEET 1 B 2 VAL A 48 ASN A 50 0 SHEET 2 B 2 ILE A 56 PRO A 58 -1 O VAL A 57 N ILE A 49 SHEET 1 C 4 ALA A 61 LYS A 67 0 SHEET 2 C 4 VAL A 71 ILE A 76 -1 O ASN A 75 N SER A 63 SHEET 3 C 4 THR A 143 THR A 147 -1 O VAL A 146 N TRP A 72 SHEET 4 C 4 VAL A 136 ASP A 140 -1 N LYS A 137 O GLU A 145 SHEET 1 D 6 LEU A 312 PRO A 313 0 SHEET 2 D 6 ILE A 479 LEU A 490 -1 O TYR A 484 N LEU A 312 SHEET 3 D 6 VAL A 264 ILE A 277 -1 N ASP A 267 O SER A 487 SHEET 4 D 6 VAL A 411 CYS A 417 -1 O ALA A 412 N GLU A 276 SHEET 5 D 6 LYS A 360 ASN A 366 1 N LEU A 364 O VAL A 411 SHEET 6 D 6 ASP A 389 GLN A 395 1 O ASP A 389 N PHE A 361 SHEET 1 E 2 VAL A 495 GLY A 496 0 SHEET 2 E 2 TYR A 513 ILE A 514 -1 O TYR A 513 N GLY A 496 SSBOND 1 CYS A 271 CYS A 417 1555 1555 1.92 CRYST1 71.827 90.637 93.702 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013922 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011033 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010672 0.00000