HEADER LYASE/ANTIBIOTIC 25-MAY-07 2Z2P TITLE CRYSTAL STRUCTURE OF CATALYTICALLY INACTIVE H270A VIRGINIAMYCIN B TITLE 2 LYASE FROM STAPHYLOCOCCUS AUREUS WITH QUINUPRISTIN CAVEAT 2Z2P MHT C 8 HAS WRONG CHIRALITY AT ATOM C3 MHT D 8 HAS WRONG CAVEAT 2 2Z2P CHIRALITY AT ATOM C3 DOL A 2002 HAS WRONG CHIRALITY AT ATOM CAVEAT 3 2Z2P C32 DOL B 2003 HAS WRONG CHIRALITY AT ATOM C17 DOL B 2003 CAVEAT 4 2Z2P HAS WRONG CHIRALITY AT ATOM C30 DOL B 2003 HAS WRONG CAVEAT 5 2Z2P CHIRALITY AT ATOM C32 COMPND MOL_ID: 1; COMPND 2 MOLECULE: VIRGINIAMYCIN B LYASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: STREPTOGRAMIN B LYASE; COMPND 5 EC: 4.2.99.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: 1. SEQUENCE FOR RESIDUES 211 AND 212 WAS DERIVED FROM COMPND 9 THE ORIGINAL GENE. 2. RESIDUES 51 TO 56 [PLPTPD] WERE REPLACED TO COMPND 10 DISRUPT CRYSTAL PACKING INTERACTIONS BY A CORRESPONDING LOOP, COMPND 11 RESIDUES 135-140 [ELPNKG].; COMPND 12 MOL_ID: 2; COMPND 13 MOLECULE: QUINUPRISTIN; COMPND 14 CHAIN: C, D; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 STRAIN: BM30002, PIP524; SOURCE 5 GENE: VGB, VGH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: STREPTOMYCES GRAMINOFACIEN; SOURCE 13 ORGANISM_TAXID: 68212 KEYWDS QUINUPRISTIN, DALFOPRISTIN, STREPTOGRAMIN, SYNERCID, LYASE-ANTIBIOTIC KEYWDS 2 COMPLEX, ANTIBIOTIC RESISTANCE, ANTIBIOTIC, VIRGINIAMYCIN B LYASE, KEYWDS 3 VIRGINIAMYCIN B HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.KORCZYNSKA,A.M.BERGHUIS REVDAT 11 15-NOV-23 2Z2P 1 LINK REVDAT 10 08-NOV-23 2Z2P 1 REMARK REVDAT 9 12-JUL-23 2Z2P 1 CAVEAT COMPND SOURCE REMARK REVDAT 9 2 1 DBREF SEQADV SEQRES LINK REVDAT 9 3 1 SITE ATOM REVDAT 8 01-NOV-17 2Z2P 1 REMARK REVDAT 7 22-APR-15 2Z2P 1 DBREF REVDAT 6 27-JUL-11 2Z2P 1 ATOM CAVEAT HEADER HETATM REVDAT 6 2 1 REMARK SEQRES SOURCE REVDAT 5 13-JUL-11 2Z2P 1 VERSN REVDAT 4 24-FEB-09 2Z2P 1 VERSN REVDAT 3 06-MAY-08 2Z2P 1 COMPND REVDAT 2 27-NOV-07 2Z2P 1 JRNL REVDAT 1 19-JUN-07 2Z2P 0 JRNL AUTH M.KORCZYNSKA,T.A.MUKHTAR,G.D.WRIGHT,A.M.BERGHUIS JRNL TITL STRUCTURAL BASIS FOR STREPTOGRAMIN B RESISTANCE IN JRNL TITL 2 STAPHYLOCOCCUS AUREUS BY VIRGINIAMYCIN B LYASE JRNL REF PROC.NATL.ACAD.SCI.USA V. 104 10388 2007 JRNL REFN ISSN 0027-8424 JRNL PMID 17563376 JRNL DOI 10.1073/PNAS.0701809104 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 3 NUMBER OF REFLECTIONS : 13189 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.268 REMARK 3 R VALUE (WORKING SET) : 0.262 REMARK 3 FREE R VALUE : 0.318 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1587 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1935 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.25 REMARK 3 BIN R VALUE (WORKING SET) : 0.3020 REMARK 3 BIN FREE R VALUE SET COUNT : 244 REMARK 3 BIN FREE R VALUE : 0.4240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4682 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.578 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.385 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 38.266 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.909 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.858 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4912 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6692 ; 1.512 ; 2.009 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 588 ; 8.874 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 202 ;38.518 ;25.644 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 788 ;18.149 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;11.864 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 734 ; 0.496 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3734 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2373 ; 0.239 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3353 ; 0.318 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 208 ; 0.181 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 11 ; 0.152 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 46 ; 0.373 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.459 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2995 ; 0.548 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4720 ; 0.752 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2245 ; 0.541 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1972 ; 0.972 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 2 A 294 2 REMARK 3 1 B 2 B 294 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 1176 ; 0.05 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 A (A): 1098 ; 0.51 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 1176 ; 0.30 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1098 ; 0.37 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 294 REMARK 3 ORIGIN FOR THE GROUP (A): -1.2157 14.3421 -23.4271 REMARK 3 T TENSOR REMARK 3 T11: -0.0665 T22: -0.0355 REMARK 3 T33: -0.0219 T12: -0.0169 REMARK 3 T13: 0.0093 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 0.5101 L22: 0.9084 REMARK 3 L33: 1.1879 L12: -0.2936 REMARK 3 L13: 0.3419 L23: 0.3164 REMARK 3 S TENSOR REMARK 3 S11: 0.0113 S12: -0.0147 S13: -0.0781 REMARK 3 S21: 0.0120 S22: -0.0447 S23: -0.0426 REMARK 3 S31: 0.0275 S32: -0.0795 S33: 0.0335 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 294 REMARK 3 ORIGIN FOR THE GROUP (A): -36.7497 20.7055 -24.1827 REMARK 3 T TENSOR REMARK 3 T11: -0.0575 T22: -0.0299 REMARK 3 T33: -0.0058 T12: 0.0161 REMARK 3 T13: -0.0121 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 0.6138 L22: 0.7623 REMARK 3 L33: 0.9556 L12: 0.3674 REMARK 3 L13: -0.2748 L23: 0.1163 REMARK 3 S TENSOR REMARK 3 S11: 0.0362 S12: 0.0109 S13: 0.0267 REMARK 3 S21: -0.0212 S22: -0.0372 S23: -0.0605 REMARK 3 S31: -0.0009 S32: -0.0747 S33: 0.0010 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2Z2P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-MAY-07. REMARK 100 THE DEPOSITION ID IS D_1000027445. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-06 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14813 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.1 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.13600 REMARK 200 FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.31000 REMARK 200 FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2Z2N REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM MES BUFFER (PH 6.5), 20%(W/V) REMARK 280 PEG 10000, PROTEIN SOLUTION SUPPLEMENTED WITH 3MM MGCL2, 3MM REMARK 280 DALFOPRISTIN, 1MM QUINUPRISTIN, PH 7.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.49950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.65050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.85000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.65050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.49950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.85000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 QUINUPRISTIN IS A STREPTOGRAMIN ANTIBIOTIC. REMARK 400 HERE, QUINUPRISTIN IS REPRESENTED BY SEQUENCE (SEQRES). REMARK 400 REMARK 400 THE QUINUPRISTIN IS OLIGOPEPTIDE, A MEMBER OF ANTIBIOTIC CLASS. REMARK 400 REMARK 400 GROUP: 1 REMARK 400 NAME: QUINUPRISTIN REMARK 400 CHAIN: C, D REMARK 400 COMPONENT_1: PEPTIDE LIKE POLYMER REMARK 400 DESCRIPTION: QUINUPRISTIN IS A CYLIC HEPTAPEPTIDE. THE RING REMARK 400 GENERATED BY LINKING RESIDUE 2 SIDE-CHAIN IS AND REMARK 400 MAIN-CHAIN RESIDUE 7. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 295 REMARK 465 ASP A 296 REMARK 465 ASN A 297 REMARK 465 MET A 298 REMARK 465 GLU A 299 REMARK 465 MET B 1 REMARK 465 LYS B 295 REMARK 465 ASP B 296 REMARK 465 ASN B 297 REMARK 465 MET B 298 REMARK 465 GLU B 299 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 86 CG CD CE NZ REMARK 470 LYS B 86 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 97 C - N - CA ANGL. DEV. = -10.3 DEGREES REMARK 500 PRO B 97 O - C - N ANGL. DEV. = 10.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 18 -56.12 -134.17 REMARK 500 SER A 23 -160.63 -125.98 REMARK 500 MET A 60 -99.26 -105.00 REMARK 500 ASP A 67 31.23 -99.84 REMARK 500 TYR A 102 -81.30 -131.87 REMARK 500 SER A 144 -102.90 -125.38 REMARK 500 VAL A 186 -87.11 -129.47 REMARK 500 ASP A 194 -7.16 81.00 REMARK 500 ARG A 226 71.62 51.30 REMARK 500 THR A 252 -153.13 -103.56 REMARK 500 GLN A 263 60.37 -66.81 REMARK 500 GLU A 268 66.66 62.85 REMARK 500 ALA A 270 -109.30 -117.90 REMARK 500 TYR B 18 -55.78 -131.87 REMARK 500 SER B 23 -164.53 -119.73 REMARK 500 LYS B 58 62.22 61.39 REMARK 500 MET B 60 -99.11 -103.66 REMARK 500 ALA B 100 61.26 61.24 REMARK 500 TYR B 102 -82.48 -131.77 REMARK 500 SER B 144 -101.35 -126.35 REMARK 500 VAL B 186 -86.45 -128.96 REMARK 500 ASP B 194 -5.33 80.34 REMARK 500 ARG B 226 73.10 47.97 REMARK 500 THR B 252 -153.19 -102.99 REMARK 500 SER B 266 56.83 36.88 REMARK 500 GLU B 268 66.37 63.22 REMARK 500 ALA B 270 -110.39 -118.64 REMARK 500 THR C 2 30.03 -96.49 REMARK 500 THR D 2 33.80 -97.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 14 THR A 15 -111.46 REMARK 500 ASP A 24 LYS A 25 145.93 REMARK 500 ASP A 128 GLY A 129 -125.22 REMARK 500 ILE A 262 GLN A 263 -122.07 REMARK 500 GLN A 263 ILE A 264 133.54 REMARK 500 ASP B 14 THR B 15 -125.33 REMARK 500 ASP B 24 LYS B 25 149.07 REMARK 500 PRO B 97 ASP B 98 -114.31 REMARK 500 ASP B 128 GLY B 129 -119.68 REMARK 500 GLN B 263 ILE B 264 137.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1003 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 67 OD2 REMARK 620 2 GLU A 69 OE2 77.8 REMARK 620 3 ASP A 127 OD2 118.4 86.0 REMARK 620 4 ASP A 127 OD1 138.1 135.9 56.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 268 OE1 REMARK 620 2 GLU A 284 OE1 89.9 REMARK 620 3 MHW C 1 O 103.1 111.1 REMARK 620 4 MHW C 1 OG1 81.2 160.8 87.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1004 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 67 OD2 REMARK 620 2 GLU B 69 OE2 76.8 REMARK 620 3 ASP B 127 OD1 134.3 80.4 REMARK 620 4 ASP B 127 OD2 131.9 138.8 58.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1002 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 268 OE1 REMARK 620 2 GLU B 284 OE1 90.8 REMARK 620 3 MHW D 1 O 91.1 107.0 REMARK 620 4 MHW D 1 OG1 81.0 167.5 82.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DOL A2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DOL B2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN C OF QUINUPRISTIN REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN D OF QUINUPRISTIN REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1SM1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS REMARK 900 RADIODURANS COMPLEXED WITH QUINUPRISTIN AND DALFOPRISTIN DBREF 2Z2P A 1 299 UNP P17978 VGB_STAAU 1 299 DBREF 2Z2P B 1 299 UNP P17978 VGB_STAAU 1 299 DBREF 2Z2P C 1 8 PDB 2Z2P 2Z2P 1 8 DBREF 2Z2P D 1 8 PDB 2Z2P 2Z2P 1 8 SEQADV 2Z2P GLU A 51 UNP P17978 PRO 51 CONFLICT SEQADV 2Z2P ASN A 54 UNP P17978 THR 54 CONFLICT SEQADV 2Z2P LYS A 55 UNP P17978 PRO 55 CONFLICT SEQADV 2Z2P GLY A 56 UNP P17978 ASP 56 CONFLICT SEQADV 2Z2P THR A 211 UNP P17978 PRO 211 CONFLICT SEQADV 2Z2P SER A 212 UNP P17978 LEU 212 CONFLICT SEQADV 2Z2P ALA A 267 UNP P17978 GLY 267 CONFLICT SEQADV 2Z2P ALA A 270 UNP P17978 HIS 270 ENGINEERED MUTATION SEQADV 2Z2P GLU B 51 UNP P17978 PRO 51 CONFLICT SEQADV 2Z2P ASN B 54 UNP P17978 THR 54 CONFLICT SEQADV 2Z2P LYS B 55 UNP P17978 PRO 55 CONFLICT SEQADV 2Z2P GLY B 56 UNP P17978 ASP 56 CONFLICT SEQADV 2Z2P THR B 211 UNP P17978 PRO 211 CONFLICT SEQADV 2Z2P SER B 212 UNP P17978 LEU 212 CONFLICT SEQADV 2Z2P ALA B 267 UNP P17978 GLY 267 CONFLICT SEQADV 2Z2P ALA B 270 UNP P17978 HIS 270 ENGINEERED MUTATION SEQRES 1 A 299 MET GLU PHE LYS LEU GLN GLU LEU ASN LEU THR ASN GLN SEQRES 2 A 299 ASP THR GLY PRO TYR GLY ILE THR VAL SER ASP LYS GLY SEQRES 3 A 299 LYS VAL TRP ILE THR GLN HIS LYS ALA ASN MET ILE SER SEQRES 4 A 299 CYS ILE ASN LEU ASP GLY LYS ILE THR GLU TYR GLU LEU SEQRES 5 A 299 PRO ASN LYS GLY ALA LYS VAL MET CYS LEU THR ILE SER SEQRES 6 A 299 SER ASP GLY GLU VAL TRP PHE THR GLU ASN ALA ALA ASN SEQRES 7 A 299 LYS ILE GLY ARG ILE THR LYS LYS GLY ILE ILE LYS GLU SEQRES 8 A 299 TYR THR LEU PRO ASN PRO ASP SER ALA PRO TYR GLY ILE SEQRES 9 A 299 THR GLU GLY PRO ASN GLY ASP ILE TRP PHE THR GLU MET SEQRES 10 A 299 ASN GLY ASN ARG ILE GLY ARG ILE THR ASP ASP GLY LYS SEQRES 11 A 299 ILE ARG GLU TYR GLU LEU PRO ASN LYS GLY SER TYR PRO SEQRES 12 A 299 SER PHE ILE THR LEU GLY SER ASP ASN ALA LEU TRP PHE SEQRES 13 A 299 THR GLU ASN GLN ASN ASN ALA ILE GLY ARG ILE THR GLU SEQRES 14 A 299 SER GLY ASP ILE THR GLU PHE LYS ILE PRO THR PRO ALA SEQRES 15 A 299 SER GLY PRO VAL GLY ILE THR LYS GLY ASN ASP ASP ALA SEQRES 16 A 299 LEU TRP PHE VAL GLU ILE ILE GLY ASN LYS ILE GLY ARG SEQRES 17 A 299 ILE THR THR SER GLY GLU ILE THR GLU PHE LYS ILE PRO SEQRES 18 A 299 THR PRO ASN ALA ARG PRO HIS ALA ILE THR ALA GLY ALA SEQRES 19 A 299 GLY ILE ASP LEU TRP PHE THR GLU TRP GLY ALA ASN LYS SEQRES 20 A 299 ILE GLY ARG LEU THR SER ASN ASN ILE ILE GLU GLU TYR SEQRES 21 A 299 PRO ILE GLN ILE LYS SER ALA GLU PRO ALA GLY ILE CYS SEQRES 22 A 299 PHE ASP GLY GLU THR ILE TRP PHE ALA MET GLU CYS ASP SEQRES 23 A 299 LYS ILE GLY LYS LEU THR LEU ILE LYS ASP ASN MET GLU SEQRES 1 B 299 MET GLU PHE LYS LEU GLN GLU LEU ASN LEU THR ASN GLN SEQRES 2 B 299 ASP THR GLY PRO TYR GLY ILE THR VAL SER ASP LYS GLY SEQRES 3 B 299 LYS VAL TRP ILE THR GLN HIS LYS ALA ASN MET ILE SER SEQRES 4 B 299 CYS ILE ASN LEU ASP GLY LYS ILE THR GLU TYR GLU LEU SEQRES 5 B 299 PRO ASN LYS GLY ALA LYS VAL MET CYS LEU THR ILE SER SEQRES 6 B 299 SER ASP GLY GLU VAL TRP PHE THR GLU ASN ALA ALA ASN SEQRES 7 B 299 LYS ILE GLY ARG ILE THR LYS LYS GLY ILE ILE LYS GLU SEQRES 8 B 299 TYR THR LEU PRO ASN PRO ASP SER ALA PRO TYR GLY ILE SEQRES 9 B 299 THR GLU GLY PRO ASN GLY ASP ILE TRP PHE THR GLU MET SEQRES 10 B 299 ASN GLY ASN ARG ILE GLY ARG ILE THR ASP ASP GLY LYS SEQRES 11 B 299 ILE ARG GLU TYR GLU LEU PRO ASN LYS GLY SER TYR PRO SEQRES 12 B 299 SER PHE ILE THR LEU GLY SER ASP ASN ALA LEU TRP PHE SEQRES 13 B 299 THR GLU ASN GLN ASN ASN ALA ILE GLY ARG ILE THR GLU SEQRES 14 B 299 SER GLY ASP ILE THR GLU PHE LYS ILE PRO THR PRO ALA SEQRES 15 B 299 SER GLY PRO VAL GLY ILE THR LYS GLY ASN ASP ASP ALA SEQRES 16 B 299 LEU TRP PHE VAL GLU ILE ILE GLY ASN LYS ILE GLY ARG SEQRES 17 B 299 ILE THR THR SER GLY GLU ILE THR GLU PHE LYS ILE PRO SEQRES 18 B 299 THR PRO ASN ALA ARG PRO HIS ALA ILE THR ALA GLY ALA SEQRES 19 B 299 GLY ILE ASP LEU TRP PHE THR GLU TRP GLY ALA ASN LYS SEQRES 20 B 299 ILE GLY ARG LEU THR SER ASN ASN ILE ILE GLU GLU TYR SEQRES 21 B 299 PRO ILE GLN ILE LYS SER ALA GLU PRO ALA GLY ILE CYS SEQRES 22 B 299 PHE ASP GLY GLU THR ILE TRP PHE ALA MET GLU CYS ASP SEQRES 23 B 299 LYS ILE GLY LYS LEU THR LEU ILE LYS ASP ASN MET GLU SEQRES 1 C 8 MHW THR DBB PRO MHU MHV 004 MHT SEQRES 1 D 8 MHW THR DBB PRO MHU MHV 004 MHT HET MHW C 1 9 HET DBB C 3 6 HET MHU C 5 15 HET MHV C 6 9 HET 004 C 7 10 HET MHT C 8 10 HET MHW D 1 9 HET DBB D 3 6 HET MHU D 5 15 HET MHV D 6 9 HET 004 D 7 10 HET MHT D 8 10 HET MG A1001 1 HET MG A1003 1 HET DOL A2002 48 HET MG B1002 1 HET MG B1004 1 HET DOL B2003 48 HETNAM MHW 3-HYDROXYPICOLINIC ACID HETNAM DBB D-ALPHA-AMINOBUTYRIC ACID HETNAM MHU 4-N,N-(DIMETHYLAMINO)-L-PHENYLALANINE HETNAM MHV 4-OXO-L-PIPECOLIC ACID HETNAM 004 (2S)-AMINO(PHENYL)ETHANOIC ACID HETNAM MHT (3S)-3-(METHYLSULFANYL)-1-AZABICYCLO[2.2.2]OCTANE HETNAM MG MAGNESIUM ION HETNAM DOL 5-(2-DIETHYLAMINO-ETHANESULFONYL)-21-HYDROXY-10- HETNAM 2 DOL ISOPROPYL-11,19-DIMETHYL-9,26-DIOXA-3,15,28-TRIAZA- HETNAM 3 DOL TRICYCLO[23.2.1.00,255]OCTACOSA-1(27),12,17,19,25(28)- HETNAM 4 DOL PENTAENE-2,8,14,23-TETRAONE HETSYN 004 L-PHENYLGLYCINE HETSYN DOL DALFOPRISTIN FORMUL 3 MHW 2(C6 H5 N O3) FORMUL 3 DBB 2(C4 H9 N O2) FORMUL 3 MHU 2(C12 H18 N2 O2) FORMUL 3 MHV 2(C6 H9 N O3) FORMUL 3 004 2(C8 H9 N O2) FORMUL 3 MHT 2(C8 H15 N S) FORMUL 5 MG 4(MG 2+) FORMUL 7 DOL 2(C34 H50 N4 O9 S) HELIX 1 1 SER A 253 ASN A 255 5 3 HELIX 2 2 SER B 253 ASN B 255 5 3 SHEET 1 AA 4 PHE A 3 ASN A 9 0 SHEET 2 AA 4 LYS A 287 LEU A 293 -1 O ILE A 288 N LEU A 8 SHEET 3 AA 4 ILE A 279 MET A 283 -1 O ILE A 279 N LEU A 291 SHEET 4 AA 4 PRO A 269 PHE A 274 -1 N ALA A 270 O ALA A 282 SHEET 1 AB 4 PRO A 17 THR A 21 0 SHEET 2 AB 4 VAL A 28 GLN A 32 -1 O TRP A 29 N THR A 21 SHEET 3 AB 4 MET A 37 ILE A 41 -1 O MET A 37 N GLN A 32 SHEET 4 AB 4 ILE A 47 GLU A 51 -1 O THR A 48 N CYS A 40 SHEET 1 AC 4 VAL A 59 ILE A 64 0 SHEET 2 AC 4 VAL A 70 GLU A 74 -1 O TRP A 71 N THR A 63 SHEET 3 AC 4 LYS A 79 ILE A 83 -1 O LYS A 79 N GLU A 74 SHEET 4 AC 4 ILE A 89 THR A 93 -1 O LYS A 90 N ARG A 82 SHEET 1 AD 4 PRO A 101 GLU A 106 0 SHEET 2 AD 4 ILE A 112 GLU A 116 -1 O TRP A 113 N THR A 105 SHEET 3 AD 4 ARG A 121 ILE A 125 -1 O ARG A 121 N GLU A 116 SHEET 4 AD 4 TYR A 134 GLU A 135 -1 O TYR A 134 N ILE A 122 SHEET 1 AE 4 PRO A 143 LEU A 148 0 SHEET 2 AE 4 LEU A 154 GLU A 158 -1 O TRP A 155 N THR A 147 SHEET 3 AE 4 ALA A 163 ILE A 167 -1 O ALA A 163 N GLU A 158 SHEET 4 AE 4 ILE A 173 LYS A 177 -1 O THR A 174 N ARG A 166 SHEET 1 AF 4 PRO A 185 LYS A 190 0 SHEET 2 AF 4 LEU A 196 GLU A 200 -1 O TRP A 197 N THR A 189 SHEET 3 AF 4 LYS A 205 ILE A 209 -1 O LYS A 205 N GLU A 200 SHEET 4 AF 4 ILE A 215 LYS A 219 -1 O THR A 216 N ARG A 208 SHEET 1 AG 4 PRO A 227 ALA A 232 0 SHEET 2 AG 4 LEU A 238 GLU A 242 -1 O TRP A 239 N THR A 231 SHEET 3 AG 4 LYS A 247 LEU A 251 -1 O LYS A 247 N GLU A 242 SHEET 4 AG 4 ILE A 257 PRO A 261 -1 O GLU A 258 N ARG A 250 SHEET 1 BA 4 PHE B 3 ASN B 9 0 SHEET 2 BA 4 LYS B 287 LEU B 293 -1 O ILE B 288 N LEU B 8 SHEET 3 BA 4 ILE B 279 MET B 283 -1 O ILE B 279 N LEU B 291 SHEET 4 BA 4 PRO B 269 PHE B 274 -1 N ALA B 270 O ALA B 282 SHEET 1 BB 4 PRO B 17 VAL B 22 0 SHEET 2 BB 4 VAL B 28 GLN B 32 -1 O TRP B 29 N THR B 21 SHEET 3 BB 4 MET B 37 ILE B 41 -1 O MET B 37 N GLN B 32 SHEET 4 BB 4 ILE B 47 GLU B 51 -1 O THR B 48 N CYS B 40 SHEET 1 BC 4 VAL B 59 ILE B 64 0 SHEET 2 BC 4 VAL B 70 GLU B 74 -1 O TRP B 71 N THR B 63 SHEET 3 BC 4 LYS B 79 ILE B 83 -1 O LYS B 79 N GLU B 74 SHEET 4 BC 4 ILE B 89 THR B 93 -1 O LYS B 90 N ARG B 82 SHEET 1 BD 4 PRO B 101 GLU B 106 0 SHEET 2 BD 4 ILE B 112 GLU B 116 -1 O TRP B 113 N THR B 105 SHEET 3 BD 4 ARG B 121 ILE B 125 -1 O ARG B 121 N GLU B 116 SHEET 4 BD 4 TYR B 134 GLU B 135 -1 O TYR B 134 N ILE B 122 SHEET 1 BE 4 PRO B 143 LEU B 148 0 SHEET 2 BE 4 LEU B 154 GLU B 158 -1 O TRP B 155 N THR B 147 SHEET 3 BE 4 ALA B 163 ILE B 167 -1 O ALA B 163 N GLU B 158 SHEET 4 BE 4 ILE B 173 LYS B 177 -1 O THR B 174 N ARG B 166 SHEET 1 BF 4 PRO B 185 LYS B 190 0 SHEET 2 BF 4 LEU B 196 GLU B 200 -1 O TRP B 197 N THR B 189 SHEET 3 BF 4 LYS B 205 ILE B 209 -1 O LYS B 205 N GLU B 200 SHEET 4 BF 4 ILE B 215 LYS B 219 -1 O THR B 216 N ARG B 208 SHEET 1 BG 4 PRO B 227 ALA B 232 0 SHEET 2 BG 4 LEU B 238 GLU B 242 -1 O TRP B 239 N THR B 231 SHEET 3 BG 4 LYS B 247 LEU B 251 -1 O LYS B 247 N GLU B 242 SHEET 4 BG 4 ILE B 257 PRO B 261 -1 O GLU B 258 N ARG B 250 LINK C MHW C 1 N THR C 2 1555 1555 1.32 LINK C THR C 2 N DBB C 3 1555 1555 1.34 LINK OG1 THR C 2 C 004 C 7 1555 1555 1.33 LINK C DBB C 3 N PRO C 4 1555 1555 1.35 LINK C PRO C 4 N MHU C 5 1555 1555 1.34 LINK C MHU C 5 N MHV C 6 1555 1555 1.37 LINK C MHV C 6 N 004 C 7 1555 1555 1.33 LINK CD2 MHV C 6 CM MHT C 8 1555 1555 1.57 LINK C MHW D 1 N THR D 2 1555 1555 1.32 LINK C THR D 2 N DBB D 3 1555 1555 1.34 LINK OG1 THR D 2 C 004 D 7 1555 1555 1.33 LINK C DBB D 3 N PRO D 4 1555 1555 1.35 LINK C PRO D 4 N MHU D 5 1555 1555 1.34 LINK C MHU D 5 N MHV D 6 1555 1555 1.37 LINK C MHV D 6 N 004 D 7 1555 1555 1.32 LINK CD2 MHV D 6 CM MHT D 8 1555 1555 1.56 LINK OD2 ASP A 67 MG MG A1003 1555 1555 2.51 LINK OE2 GLU A 69 MG MG A1003 1555 1555 1.98 LINK OD2 ASP A 127 MG MG A1003 1555 1555 2.14 LINK OD1 ASP A 127 MG MG A1003 1555 1555 2.42 LINK OE1 GLU A 268 MG MG A1001 1555 1555 2.07 LINK OE1 GLU A 284 MG MG A1001 1555 1555 1.91 LINK MG MG A1001 O MHW C 1 1555 1555 1.93 LINK MG MG A1001 OG1 MHW C 1 1555 1555 1.71 LINK OD2 ASP B 67 MG MG B1004 1555 1555 2.50 LINK OE2 GLU B 69 MG MG B1004 1555 1555 1.91 LINK OD1 ASP B 127 MG MG B1004 1555 1555 2.37 LINK OD2 ASP B 127 MG MG B1004 1555 1555 2.09 LINK OE1 GLU B 268 MG MG B1002 1555 1555 2.10 LINK OE1 GLU B 284 MG MG B1002 1555 1555 1.95 LINK MG MG B1002 O MHW D 1 1555 1555 2.09 LINK MG MG B1002 OG1 MHW D 1 1555 1555 1.66 CISPEP 1 MHU C 5 MHV C 6 0 0.83 CISPEP 2 MHU D 5 MHV D 6 0 0.19 SITE 1 AC1 2 GLU A 268 GLU A 284 SITE 1 AC2 4 ASP A 67 GLU A 69 TRP A 71 ASP A 127 SITE 1 AC3 9 LYS A 34 TRP A 243 SER A 266 GLU A 268 SITE 2 AC3 9 ASN B 109 ASP B 151 ASN B 152 THR B 168 SITE 3 AC3 9 GLU B 169 SITE 1 AC4 2 GLU B 268 GLU B 284 SITE 1 AC5 3 ASP B 67 GLU B 69 ASP B 127 SITE 1 AC6 4 ASN A 152 LYS B 34 TRP B 243 GLU B 268 SITE 1 AC7 24 TYR A 18 HIS A 33 TYR A 102 MET A 117 SITE 2 AC7 24 TYR A 142 SER A 144 ASN A 159 GLN A 160 SITE 3 AC7 24 ALA A 182 GLY A 184 VAL A 186 ILE A 201 SITE 4 AC7 24 ARG A 226 HIS A 228 TRP A 243 GLU A 268 SITE 5 AC7 24 GLU A 284 MG A1001 DOL A2002 ASP B 24 SITE 6 AC7 24 SER B 66 GLU B 106 PRO B 108 ASN B 152 SITE 1 AC8 22 ASP A 24 SER A 66 GLU A 106 PRO A 108 SITE 2 AC8 22 ASN A 152 TYR B 18 HIS B 33 TYR B 102 SITE 3 AC8 22 MET B 117 TYR B 142 SER B 144 ASN B 159 SITE 4 AC8 22 GLN B 160 ALA B 182 ILE B 201 ARG B 226 SITE 5 AC8 22 HIS B 228 TRP B 243 GLU B 268 GLU B 284 SITE 6 AC8 22 MG B1002 DOL B2003 CRYST1 70.999 93.700 95.301 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014085 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010672 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010493 0.00000