data_2Z2T # _entry.id 2Z2T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2Z2T pdb_00002z2t 10.2210/pdb2z2t/pdb RCSB RCSB027449 ? ? WWPDB D_1000027449 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-06-03 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 4 'Structure model' 1 3 2023-11-15 5 'Structure model' 1 4 2024-10-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 4 'Structure model' 'Data collection' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site 7 4 'Structure model' chem_comp_atom 8 4 'Structure model' chem_comp_bond 9 5 'Structure model' pdbx_entry_details 10 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 5 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 6 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 7 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 8 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 9 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 10 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 11 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 12 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 13 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 14 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 15 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 16 3 'Structure model' '_struct_site.pdbx_auth_seq_id' 17 4 'Structure model' '_chem_comp_atom.atom_id' 18 4 'Structure model' '_chem_comp_bond.atom_id_2' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2Z2T _pdbx_database_status.recvd_initial_deposition_date 2007-05-28 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nakamura, S.' 1 'Ohkubo, T.' 2 'Kobayashi, Y.' 3 # _citation.id primary _citation.title 'Intrahelical Salt-bridges in a-Helical Peptide Enhances its Binding to the Target: A New Design for HIV-1 Fusion Inhibitors' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nishikawa, H.' 1 ? primary 'Nakamura, S.' 2 ? primary 'Kodama, E.' 3 ? primary 'Ito, S.' 4 ? primary 'Kajiwara, K.' 5 ? primary 'Izumi, K.' 6 ? primary 'Sakagami, Y.' 7 ? primary 'Oishi, S.' 8 ? primary 'Ohkubo, T.' 9 ? primary 'Kobayashi, Y.' 10 ? primary 'Fujii, N.' 11 ? primary 'Matsuoka, M.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'gp41 fragment N36' 4208.886 3 ? ? ? ? 2 polymer syn 'Fusion inhibitor peptide SC34EK' 4411.016 3 ? ? ? ? 3 non-polymer syn 'ACETIC ACID' 60.052 1 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 5 water nat water 18.015 171 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes '(ACE)SDIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARIL(NH2)' XSDIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILX A,B,C ? 2 'polypeptide(L)' no yes '(ACE)W(NLE)EWDRKIEEYTKKIEELIKKSQEQQEKNEKELK(NH2)' XWLEWDRKIEEYTKKIEELIKKSQEQQEKNEKELKX D,E,F ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ACETIC ACID' ACY 4 'SULFATE ION' SO4 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 SER n 1 3 ASP n 1 4 ILE n 1 5 VAL n 1 6 GLN n 1 7 GLN n 1 8 GLN n 1 9 ASN n 1 10 ASN n 1 11 LEU n 1 12 LEU n 1 13 ARG n 1 14 ALA n 1 15 ILE n 1 16 GLU n 1 17 ALA n 1 18 GLN n 1 19 GLN n 1 20 HIS n 1 21 LEU n 1 22 LEU n 1 23 GLN n 1 24 LEU n 1 25 THR n 1 26 VAL n 1 27 TRP n 1 28 GLY n 1 29 ILE n 1 30 LYS n 1 31 GLN n 1 32 LEU n 1 33 GLN n 1 34 ALA n 1 35 ARG n 1 36 ILE n 1 37 LEU n 1 38 NH2 n 2 1 ACE n 2 2 TRP n 2 3 NLE n 2 4 GLU n 2 5 TRP n 2 6 ASP n 2 7 ARG n 2 8 LYS n 2 9 ILE n 2 10 GLU n 2 11 GLU n 2 12 TYR n 2 13 THR n 2 14 LYS n 2 15 LYS n 2 16 ILE n 2 17 GLU n 2 18 GLU n 2 19 LEU n 2 20 ILE n 2 21 LYS n 2 22 LYS n 2 23 SER n 2 24 GLN n 2 25 GLU n 2 26 GLN n 2 27 GLN n 2 28 GLU n 2 29 LYS n 2 30 ASN n 2 31 GLU n 2 32 LYS n 2 33 GLU n 2 34 LEU n 2 35 LYS n 2 36 NH2 n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? 'peptide synthesis' 2 1 sample ? ? ? ? ? 'peptide synthesis' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ACY non-polymer . 'ACETIC ACID' ? 'C2 H4 O2' 60.052 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 NLE 'L-peptide linking' n NORLEUCINE ? 'C6 H13 N O2' 131.173 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 1545 1545 ACE ACE A . n A 1 2 SER 2 1546 1546 SER SER A . n A 1 3 ASP 3 1547 1547 ASP ASP A . n A 1 4 ILE 4 1548 1548 ILE ILE A . n A 1 5 VAL 5 1549 1549 VAL VAL A . n A 1 6 GLN 6 1550 1550 GLN GLN A . n A 1 7 GLN 7 1551 1551 GLN GLN A . n A 1 8 GLN 8 1552 1552 GLN GLN A . n A 1 9 ASN 9 1553 1553 ASN ASN A . n A 1 10 ASN 10 1554 1554 ASN ASN A . n A 1 11 LEU 11 1555 1555 LEU LEU A . n A 1 12 LEU 12 1556 1556 LEU LEU A . n A 1 13 ARG 13 1557 1557 ARG ARG A . n A 1 14 ALA 14 1558 1558 ALA ALA A . n A 1 15 ILE 15 1559 1559 ILE ILE A . n A 1 16 GLU 16 1560 1560 GLU GLU A . n A 1 17 ALA 17 1561 1561 ALA ALA A . n A 1 18 GLN 18 1562 1562 GLN GLN A . n A 1 19 GLN 19 1563 1563 GLN GLN A . n A 1 20 HIS 20 1564 1564 HIS HIS A . n A 1 21 LEU 21 1565 1565 LEU LEU A . n A 1 22 LEU 22 1566 1566 LEU LEU A . n A 1 23 GLN 23 1567 1567 GLN GLN A . n A 1 24 LEU 24 1568 1568 LEU LEU A . n A 1 25 THR 25 1569 1569 THR THR A . n A 1 26 VAL 26 1570 1570 VAL VAL A . n A 1 27 TRP 27 1571 1571 TRP TRP A . n A 1 28 GLY 28 1572 1572 GLY GLY A . n A 1 29 ILE 29 1573 1573 ILE ILE A . n A 1 30 LYS 30 1574 1574 LYS LYS A . n A 1 31 GLN 31 1575 1575 GLN GLN A . n A 1 32 LEU 32 1576 1576 LEU LEU A . n A 1 33 GLN 33 1577 1577 GLN GLN A . n A 1 34 ALA 34 1578 1578 ALA ALA A . n A 1 35 ARG 35 1579 1579 ARG ARG A . n A 1 36 ILE 36 1580 1580 ILE ILE A . n A 1 37 LEU 37 1581 1581 LEU LE1 A . n A 1 38 NH2 38 1582 1581 NH2 LE1 A . n B 1 1 ACE 1 2545 2545 ACE ACE B . n B 1 2 SER 2 2546 2546 SER SER B . n B 1 3 ASP 3 2547 2547 ASP ASP B . n B 1 4 ILE 4 2548 2548 ILE ILE B . n B 1 5 VAL 5 2549 2549 VAL VAL B . n B 1 6 GLN 6 2550 2550 GLN GLN B . n B 1 7 GLN 7 2551 2551 GLN GLN B . n B 1 8 GLN 8 2552 2552 GLN GLN B . n B 1 9 ASN 9 2553 2553 ASN ASN B . n B 1 10 ASN 10 2554 2554 ASN ASN B . n B 1 11 LEU 11 2555 2555 LEU LEU B . n B 1 12 LEU 12 2556 2556 LEU LEU B . n B 1 13 ARG 13 2557 2557 ARG ARG B . n B 1 14 ALA 14 2558 2558 ALA ALA B . n B 1 15 ILE 15 2559 2559 ILE ILE B . n B 1 16 GLU 16 2560 2560 GLU GLU B . n B 1 17 ALA 17 2561 2561 ALA ALA B . n B 1 18 GLN 18 2562 2562 GLN GLN B . n B 1 19 GLN 19 2563 2563 GLN GLN B . n B 1 20 HIS 20 2564 2564 HIS HIS B . n B 1 21 LEU 21 2565 2565 LEU LEU B . n B 1 22 LEU 22 2566 2566 LEU LEU B . n B 1 23 GLN 23 2567 2567 GLN GLN B . n B 1 24 LEU 24 2568 2568 LEU LEU B . n B 1 25 THR 25 2569 2569 THR THR B . n B 1 26 VAL 26 2570 2570 VAL VAL B . n B 1 27 TRP 27 2571 2571 TRP TRP B . n B 1 28 GLY 28 2572 2572 GLY GLY B . n B 1 29 ILE 29 2573 2573 ILE ILE B . n B 1 30 LYS 30 2574 2574 LYS LYS B . n B 1 31 GLN 31 2575 2575 GLN GLN B . n B 1 32 LEU 32 2576 2576 LEU LEU B . n B 1 33 GLN 33 2577 2577 GLN GLN B . n B 1 34 ALA 34 2578 2578 ALA ALA B . n B 1 35 ARG 35 2579 2579 ARG ARG B . n B 1 36 ILE 36 2580 2580 ILE ILE B . n B 1 37 LEU 37 2581 2581 LEU LE1 B . n B 1 38 NH2 38 2582 2581 NH2 LE1 B . n C 1 1 ACE 1 3545 3545 ACE ACE C . n C 1 2 SER 2 3546 3546 SER SER C . n C 1 3 ASP 3 3547 3547 ASP ASP C . n C 1 4 ILE 4 3548 3548 ILE ILE C . n C 1 5 VAL 5 3549 3549 VAL VAL C . n C 1 6 GLN 6 3550 3550 GLN GLN C . n C 1 7 GLN 7 3551 3551 GLN GLN C . n C 1 8 GLN 8 3552 3552 GLN GLN C . n C 1 9 ASN 9 3553 3553 ASN ASN C . n C 1 10 ASN 10 3554 3554 ASN ASN C . n C 1 11 LEU 11 3555 3555 LEU LEU C . n C 1 12 LEU 12 3556 3556 LEU LEU C . n C 1 13 ARG 13 3557 3557 ARG ARG C . n C 1 14 ALA 14 3558 3558 ALA ALA C . n C 1 15 ILE 15 3559 3559 ILE ILE C . n C 1 16 GLU 16 3560 3560 GLU GLU C . n C 1 17 ALA 17 3561 3561 ALA ALA C . n C 1 18 GLN 18 3562 3562 GLN GLN C . n C 1 19 GLN 19 3563 3563 GLN GLN C . n C 1 20 HIS 20 3564 3564 HIS HIS C . n C 1 21 LEU 21 3565 3565 LEU LEU C . n C 1 22 LEU 22 3566 3566 LEU LEU C . n C 1 23 GLN 23 3567 3567 GLN GLN C . n C 1 24 LEU 24 3568 3568 LEU LEU C . n C 1 25 THR 25 3569 3569 THR THR C . n C 1 26 VAL 26 3570 3570 VAL VAL C . n C 1 27 TRP 27 3571 3571 TRP TRP C . n C 1 28 GLY 28 3572 3572 GLY GLY C . n C 1 29 ILE 29 3573 3573 ILE ILE C . n C 1 30 LYS 30 3574 3574 LYS LYS C . n C 1 31 GLN 31 3575 3575 GLN GLN C . n C 1 32 LEU 32 3576 3576 LEU LEU C . n C 1 33 GLN 33 3577 3577 GLN GLN C . n C 1 34 ALA 34 3578 3578 ALA ALA C . n C 1 35 ARG 35 3579 3579 ARG ARG C . n C 1 36 ILE 36 3580 3580 ILE ILE C . n C 1 37 LEU 37 3581 3581 LEU LE1 C . n C 1 38 NH2 38 3582 3581 NH2 LE1 C . n D 2 1 ACE 1 1627 1627 ACE ACE D . n D 2 2 TRP 2 1628 1628 TRP TRP D . n D 2 3 NLE 3 1629 1629 NLE NLE D . n D 2 4 GLU 4 1630 1630 GLU GLU D . n D 2 5 TRP 5 1631 1631 TRP TRP D . n D 2 6 ASP 6 1632 1632 ASP ASP D . n D 2 7 ARG 7 1633 1633 ARG ARG D . n D 2 8 LYS 8 1634 1634 LYS LYS D . n D 2 9 ILE 9 1635 1635 ILE ILE D . n D 2 10 GLU 10 1636 1636 GLU GLU D . n D 2 11 GLU 11 1637 1637 GLU GLU D . n D 2 12 TYR 12 1638 1638 TYR TYR D . n D 2 13 THR 13 1639 1639 THR THR D . n D 2 14 LYS 14 1640 1640 LYS LYS D . n D 2 15 LYS 15 1641 1641 LYS LYS D . n D 2 16 ILE 16 1642 1642 ILE ILE D . n D 2 17 GLU 17 1643 1643 GLU GLU D . n D 2 18 GLU 18 1644 1644 GLU GLU D . n D 2 19 LEU 19 1645 1645 LEU LEU D . n D 2 20 ILE 20 1646 1646 ILE ILE D . n D 2 21 LYS 21 1647 1647 LYS LYS D . n D 2 22 LYS 22 1648 1648 LYS LYS D . n D 2 23 SER 23 1649 1649 SER SER D . n D 2 24 GLN 24 1650 1650 GLN GLN D . n D 2 25 GLU 25 1651 1651 GLU GLU D . n D 2 26 GLN 26 1652 1652 GLN GLN D . n D 2 27 GLN 27 1653 1653 GLN GLN D . n D 2 28 GLU 28 1654 1654 GLU GLU D . n D 2 29 LYS 29 1655 1655 LYS LYS D . n D 2 30 ASN 30 1656 1656 ASN ASN D . n D 2 31 GLU 31 1657 1657 GLU GLU D . n D 2 32 LYS 32 1658 1658 LYS LYS D . n D 2 33 GLU 33 1659 1659 GLU GLU D . n D 2 34 LEU 34 1660 1660 LEU LEU D . n D 2 35 LYS 35 1661 1661 LYS LY1 D . n D 2 36 NH2 36 1662 1661 NH2 LY1 D . n E 2 1 ACE 1 2627 2627 ACE ACE E . n E 2 2 TRP 2 2628 2628 TRP TRP E . n E 2 3 NLE 3 2629 2629 NLE NLE E . n E 2 4 GLU 4 2630 2630 GLU GLU E . n E 2 5 TRP 5 2631 2631 TRP TRP E . n E 2 6 ASP 6 2632 2632 ASP ASP E . n E 2 7 ARG 7 2633 2633 ARG ARG E . n E 2 8 LYS 8 2634 2634 LYS LYS E . n E 2 9 ILE 9 2635 2635 ILE ILE E . n E 2 10 GLU 10 2636 2636 GLU GLU E . n E 2 11 GLU 11 2637 2637 GLU GLU E . n E 2 12 TYR 12 2638 2638 TYR TYR E . n E 2 13 THR 13 2639 2639 THR THR E . n E 2 14 LYS 14 2640 2640 LYS LYS E . n E 2 15 LYS 15 2641 2641 LYS LYS E . n E 2 16 ILE 16 2642 2642 ILE ILE E . n E 2 17 GLU 17 2643 2643 GLU GLU E . n E 2 18 GLU 18 2644 2644 GLU GLU E . n E 2 19 LEU 19 2645 2645 LEU LEU E . n E 2 20 ILE 20 2646 2646 ILE ILE E . n E 2 21 LYS 21 2647 2647 LYS LYS E . n E 2 22 LYS 22 2648 2648 LYS LYS E . n E 2 23 SER 23 2649 2649 SER SER E . n E 2 24 GLN 24 2650 2650 GLN GLN E . n E 2 25 GLU 25 2651 2651 GLU GLU E . n E 2 26 GLN 26 2652 2652 GLN GLN E . n E 2 27 GLN 27 2653 2653 GLN GLN E . n E 2 28 GLU 28 2654 2654 GLU GLU E . n E 2 29 LYS 29 2655 2655 LYS LYS E . n E 2 30 ASN 30 2656 2656 ASN ASN E . n E 2 31 GLU 31 2657 2657 GLU GLU E . n E 2 32 LYS 32 2658 2658 LYS LYS E . n E 2 33 GLU 33 2659 2659 GLU GLU E . n E 2 34 LEU 34 2660 2660 LEU LEU E . n E 2 35 LYS 35 2661 2661 LYS LY1 E . n E 2 36 NH2 36 2662 2661 NH2 LY1 E . n F 2 1 ACE 1 3627 3627 ACE ACE F . n F 2 2 TRP 2 3628 3628 TRP TRP F . n F 2 3 NLE 3 3629 3629 NLE NLE F . n F 2 4 GLU 4 3630 3630 GLU GLU F . n F 2 5 TRP 5 3631 3631 TRP TRP F . n F 2 6 ASP 6 3632 3632 ASP ASP F . n F 2 7 ARG 7 3633 3633 ARG ARG F . n F 2 8 LYS 8 3634 3634 LYS LYS F . n F 2 9 ILE 9 3635 3635 ILE ILE F . n F 2 10 GLU 10 3636 3636 GLU GLU F . n F 2 11 GLU 11 3637 3637 GLU GLU F . n F 2 12 TYR 12 3638 3638 TYR TYR F . n F 2 13 THR 13 3639 3639 THR THR F . n F 2 14 LYS 14 3640 3640 LYS LYS F . n F 2 15 LYS 15 3641 3641 LYS LYS F . n F 2 16 ILE 16 3642 3642 ILE ILE F . n F 2 17 GLU 17 3643 3643 GLU GLU F . n F 2 18 GLU 18 3644 3644 GLU GLU F . n F 2 19 LEU 19 3645 3645 LEU LEU F . n F 2 20 ILE 20 3646 3646 ILE ILE F . n F 2 21 LYS 21 3647 3647 LYS LYS F . n F 2 22 LYS 22 3648 3648 LYS LYS F . n F 2 23 SER 23 3649 3649 SER SER F . n F 2 24 GLN 24 3650 3650 GLN GLN F . n F 2 25 GLU 25 3651 3651 GLU GLU F . n F 2 26 GLN 26 3652 3652 GLN GLN F . n F 2 27 GLN 27 3653 3653 GLN GLN F . n F 2 28 GLU 28 3654 3654 GLU GLU F . n F 2 29 LYS 29 3655 3655 LYS LYS F . n F 2 30 ASN 30 3656 3656 ASN ASN F . n F 2 31 GLU 31 3657 3657 GLU GLU F . n F 2 32 LYS 32 3658 3658 LYS LYS F . n F 2 33 GLU 33 3659 3659 GLU GLU F . n F 2 34 LEU 34 3660 3660 LEU LEU F . n F 2 35 LYS 35 3661 3661 LYS LY1 F . n F 2 36 NH2 36 3662 3661 NH2 LY1 F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 ACY 1 5001 5001 ACY ACY C . H 4 SO4 1 4001 4001 SO4 SO4 E . I 5 HOH 1 4 4 HOH HOH A . I 5 HOH 2 13 13 HOH HOH A . I 5 HOH 3 15 15 HOH HOH A . I 5 HOH 4 19 19 HOH HOH A . I 5 HOH 5 25 25 HOH HOH A . I 5 HOH 6 29 29 HOH HOH A . I 5 HOH 7 33 33 HOH HOH A . I 5 HOH 8 37 37 HOH HOH A . I 5 HOH 9 40 40 HOH HOH A . I 5 HOH 10 44 44 HOH HOH A . I 5 HOH 11 49 49 HOH HOH A . I 5 HOH 12 55 55 HOH HOH A . I 5 HOH 13 65 65 HOH HOH A . I 5 HOH 14 67 67 HOH HOH A . I 5 HOH 15 71 71 HOH HOH A . I 5 HOH 16 72 72 HOH HOH A . I 5 HOH 17 74 74 HOH HOH A . I 5 HOH 18 82 82 HOH HOH A . I 5 HOH 19 83 83 HOH HOH A . I 5 HOH 20 92 92 HOH HOH A . I 5 HOH 21 99 99 HOH HOH A . I 5 HOH 22 103 103 HOH HOH A . I 5 HOH 23 104 104 HOH HOH A . I 5 HOH 24 105 105 HOH HOH A . I 5 HOH 25 108 108 HOH HOH A . I 5 HOH 26 109 109 HOH HOH A . I 5 HOH 27 110 110 HOH HOH A . I 5 HOH 28 111 111 HOH HOH A . I 5 HOH 29 114 114 HOH HOH A . I 5 HOH 30 118 118 HOH HOH A . I 5 HOH 31 122 122 HOH HOH A . I 5 HOH 32 126 126 HOH HOH A . I 5 HOH 33 130 130 HOH HOH A . I 5 HOH 34 139 139 HOH HOH A . I 5 HOH 35 153 153 HOH HOH A . I 5 HOH 36 158 158 HOH HOH A . I 5 HOH 37 166 166 HOH HOH A . J 5 HOH 1 14 14 HOH HOH B . J 5 HOH 2 17 17 HOH HOH B . J 5 HOH 3 24 24 HOH HOH B . J 5 HOH 4 32 32 HOH HOH B . J 5 HOH 5 36 36 HOH HOH B . J 5 HOH 6 38 38 HOH HOH B . J 5 HOH 7 39 39 HOH HOH B . J 5 HOH 8 52 52 HOH HOH B . J 5 HOH 9 54 54 HOH HOH B . J 5 HOH 10 57 57 HOH HOH B . J 5 HOH 11 75 75 HOH HOH B . J 5 HOH 12 77 77 HOH HOH B . J 5 HOH 13 88 88 HOH HOH B . J 5 HOH 14 96 96 HOH HOH B . J 5 HOH 15 137 137 HOH HOH B . J 5 HOH 16 162 162 HOH HOH B . J 5 HOH 17 173 173 HOH HOH B . K 5 HOH 1 1 1 HOH HOH C . K 5 HOH 2 2 2 HOH HOH C . K 5 HOH 3 6 6 HOH HOH C . K 5 HOH 4 7 7 HOH HOH C . K 5 HOH 5 9 9 HOH HOH C . K 5 HOH 6 20 20 HOH HOH C . K 5 HOH 7 21 21 HOH HOH C . K 5 HOH 8 26 26 HOH HOH C . K 5 HOH 9 27 27 HOH HOH C . K 5 HOH 10 48 48 HOH HOH C . K 5 HOH 11 51 51 HOH HOH C . K 5 HOH 12 58 58 HOH HOH C . K 5 HOH 13 60 60 HOH HOH C . K 5 HOH 14 69 69 HOH HOH C . K 5 HOH 15 76 76 HOH HOH C . K 5 HOH 16 84 84 HOH HOH C . K 5 HOH 17 86 86 HOH HOH C . K 5 HOH 18 91 91 HOH HOH C . K 5 HOH 19 95 95 HOH HOH C . K 5 HOH 20 106 106 HOH HOH C . K 5 HOH 21 107 107 HOH HOH C . K 5 HOH 22 112 112 HOH HOH C . K 5 HOH 23 113 113 HOH HOH C . K 5 HOH 24 115 115 HOH HOH C . K 5 HOH 25 123 123 HOH HOH C . K 5 HOH 26 131 131 HOH HOH C . K 5 HOH 27 133 133 HOH HOH C . K 5 HOH 28 147 147 HOH HOH C . K 5 HOH 29 161 161 HOH HOH C . L 5 HOH 1 8 8 HOH HOH D . L 5 HOH 2 11 11 HOH HOH D . L 5 HOH 3 16 16 HOH HOH D . L 5 HOH 4 30 30 HOH HOH D . L 5 HOH 5 31 31 HOH HOH D . L 5 HOH 6 41 41 HOH HOH D . L 5 HOH 7 42 42 HOH HOH D . L 5 HOH 8 50 50 HOH HOH D . L 5 HOH 9 64 64 HOH HOH D . L 5 HOH 10 70 70 HOH HOH D . L 5 HOH 11 78 78 HOH HOH D . L 5 HOH 12 79 79 HOH HOH D . L 5 HOH 13 80 80 HOH HOH D . L 5 HOH 14 85 85 HOH HOH D . L 5 HOH 15 87 87 HOH HOH D . L 5 HOH 16 89 89 HOH HOH D . L 5 HOH 17 93 93 HOH HOH D . L 5 HOH 18 101 101 HOH HOH D . L 5 HOH 19 116 116 HOH HOH D . L 5 HOH 20 124 124 HOH HOH D . L 5 HOH 21 128 128 HOH HOH D . L 5 HOH 22 132 132 HOH HOH D . L 5 HOH 23 141 141 HOH HOH D . L 5 HOH 24 149 149 HOH HOH D . L 5 HOH 25 156 156 HOH HOH D . L 5 HOH 26 159 159 HOH HOH D . L 5 HOH 27 169 169 HOH HOH D . L 5 HOH 28 171 171 HOH HOH D . L 5 HOH 29 174 174 HOH HOH D . L 5 HOH 30 176 176 HOH HOH D . M 5 HOH 1 5 5 HOH HOH E . M 5 HOH 2 12 12 HOH HOH E . M 5 HOH 3 18 18 HOH HOH E . M 5 HOH 4 22 22 HOH HOH E . M 5 HOH 5 34 34 HOH HOH E . M 5 HOH 6 46 46 HOH HOH E . M 5 HOH 7 53 53 HOH HOH E . M 5 HOH 8 59 59 HOH HOH E . M 5 HOH 9 62 62 HOH HOH E . M 5 HOH 10 68 68 HOH HOH E . M 5 HOH 11 73 73 HOH HOH E . M 5 HOH 12 94 94 HOH HOH E . M 5 HOH 13 100 100 HOH HOH E . M 5 HOH 14 102 102 HOH HOH E . M 5 HOH 15 120 120 HOH HOH E . M 5 HOH 16 136 136 HOH HOH E . M 5 HOH 17 138 138 HOH HOH E . M 5 HOH 18 142 142 HOH HOH E . M 5 HOH 19 150 150 HOH HOH E . M 5 HOH 20 151 151 HOH HOH E . M 5 HOH 21 154 154 HOH HOH E . M 5 HOH 22 155 155 HOH HOH E . M 5 HOH 23 164 164 HOH HOH E . M 5 HOH 24 167 167 HOH HOH E . M 5 HOH 25 168 168 HOH HOH E . M 5 HOH 26 170 170 HOH HOH E . M 5 HOH 27 172 172 HOH HOH E . N 5 HOH 1 3 3 HOH HOH F . N 5 HOH 2 10 10 HOH HOH F . N 5 HOH 3 23 23 HOH HOH F . N 5 HOH 4 28 28 HOH HOH F . N 5 HOH 5 35 35 HOH HOH F . N 5 HOH 6 43 43 HOH HOH F . N 5 HOH 7 45 45 HOH HOH F . N 5 HOH 8 47 47 HOH HOH F . N 5 HOH 9 56 56 HOH HOH F . N 5 HOH 10 61 61 HOH HOH F . N 5 HOH 11 63 63 HOH HOH F . N 5 HOH 12 66 66 HOH HOH F . N 5 HOH 13 81 81 HOH HOH F . N 5 HOH 14 90 90 HOH HOH F . N 5 HOH 15 97 97 HOH HOH F . N 5 HOH 16 98 98 HOH HOH F . N 5 HOH 17 117 117 HOH HOH F . N 5 HOH 18 119 119 HOH HOH F . N 5 HOH 19 121 121 HOH HOH F . N 5 HOH 20 125 125 HOH HOH F . N 5 HOH 21 127 127 HOH HOH F . N 5 HOH 22 129 129 HOH HOH F . N 5 HOH 23 134 134 HOH HOH F . N 5 HOH 24 135 135 HOH HOH F . N 5 HOH 25 146 146 HOH HOH F . N 5 HOH 26 148 148 HOH HOH F . N 5 HOH 27 152 152 HOH HOH F . N 5 HOH 28 157 157 HOH HOH F . N 5 HOH 29 160 160 HOH HOH F . N 5 HOH 30 163 163 HOH HOH F . N 5 HOH 31 175 175 HOH HOH F . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 AMoRE phasing . ? 5 # _cell.entry_id 2Z2T _cell.length_a 105.014 _cell.length_b 105.014 _cell.length_c 78.308 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2Z2T _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2Z2T _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.85 _exptl_crystal.density_percent_sol 74.62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.0 _exptl_crystal_grow.pdbx_details '100mM Sodium Acetate Buffer, pH4.0, 200mM Ammonium Sulphate, 14% PEG2000MME, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU JUPITER 210' _diffrn_detector.pdbx_collection_date 2007-04-05 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL38B1' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL38B1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 2Z2T _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.10 _reflns.d_resolution_low 90.0 _reflns.number_all ? _reflns.number_obs 29461 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.122 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 35.9 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 2Z2T _refine.ls_number_reflns_obs 27843 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.85 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 99.76 _refine.ls_R_factor_obs 0.21464 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21337 _refine.ls_R_factor_R_free 0.23803 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1494 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.935 _refine.correlation_coeff_Fo_to_Fc_free 0.914 _refine.B_iso_mean 29.931 _refine.aniso_B[1][1] 0.01 _refine.aniso_B[2][2] 0.01 _refine.aniso_B[3][3] -0.01 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1AIK' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.145 _refine.pdbx_overall_ESU_R_Free 0.137 _refine.overall_SU_ML 0.092 _refine.overall_SU_B 3.373 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1806 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 175 _refine_hist.number_atoms_total 2010 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 19.85 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.022 ? 1855 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.015 1.983 ? 2463 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 3.788 5.000 ? 198 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 30.110 26.765 ? 102 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.896 15.000 ? 396 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.850 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.075 0.200 ? 267 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 1309 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.183 0.200 ? 890 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.280 0.200 ? 1265 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.149 0.200 ? 134 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.125 0.200 ? 21 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.158 0.200 ? 15 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.806 1.500 ? 1122 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.228 2.000 ? 1697 'X-RAY DIFFRACTION' ? r_scbond_it 2.203 3.000 ? 859 'X-RAY DIFFRACTION' ? r_scangle_it 3.725 4.500 ? 766 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.100 _refine_ls_shell.d_res_low 2.154 _refine_ls_shell.number_reflns_R_work 2029 _refine_ls_shell.R_factor_R_work 0.231 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.255 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 106 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2Z2T _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2Z2T _struct.title 'Crystal structure of the complex between gp41 fragment N36 and fusion inhibitor SC34EK' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2Z2T _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/INHIBITOR' _struct_keywords.text 'coiled-coil, VIRAL PROTEIN-INHIBITOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 5 ? M N N 5 ? N N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 PDB 2Z2T 2Z2T 1 ? ? ? 2 PDB 2Z2T 2Z2T 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2Z2T A 2 ? 37 ? 2Z2T 1546 ? 1581 ? 1546 1581 2 1 2Z2T B 2 ? 37 ? 2Z2T 2546 ? 2581 ? 2546 2581 3 1 2Z2T C 2 ? 37 ? 2Z2T 3546 ? 3581 ? 3546 3581 4 2 2Z2T D 2 ? 35 ? 2Z2T 1628 ? 1661 ? 1628 1661 5 2 2Z2T E 2 ? 35 ? 2Z2T 2628 ? 2661 ? 2628 2661 6 2 2Z2T F 2 ? 35 ? 2Z2T 3628 ? 3661 ? 3628 3661 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 13400 ? 1 MORE -106.8 ? 1 'SSA (A^2)' 11460 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 2 ? LEU A 37 ? SER A 1546 LEU A 1581 1 ? 36 HELX_P HELX_P2 2 SER B 2 ? LEU B 37 ? SER B 2546 LEU B 2581 1 ? 36 HELX_P HELX_P3 3 SER C 2 ? LEU C 37 ? SER C 3546 LEU C 3581 1 ? 36 HELX_P HELX_P4 4 TRP D 2 ? LYS D 35 ? TRP D 1628 LYS D 1661 1 ? 34 HELX_P HELX_P5 5 TRP E 2 ? LYS E 35 ? TRP E 2628 LYS E 2661 1 ? 34 HELX_P HELX_P6 6 TRP F 2 ? LYS F 35 ? TRP F 3628 LYS F 3661 1 ? 34 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A SER 2 N ? ? A ACE 1545 A SER 1546 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale2 covale both ? A LEU 37 C ? ? ? 1_555 A NH2 38 N ? ? A LEU 1581 A NH2 1582 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale3 covale both ? B ACE 1 C ? ? ? 1_555 B SER 2 N ? ? B ACE 2545 B SER 2546 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale4 covale both ? B LEU 37 C ? ? ? 1_555 B NH2 38 N ? ? B LEU 2581 B NH2 2582 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale5 covale both ? C ACE 1 C ? ? ? 1_555 C SER 2 N ? ? C ACE 3545 C SER 3546 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale6 covale both ? C LEU 37 C ? ? ? 1_555 C NH2 38 N ? ? C LEU 3581 C NH2 3582 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale7 covale both ? D ACE 1 C ? ? ? 1_555 D TRP 2 N ? ? D ACE 1627 D TRP 1628 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale8 covale both ? D TRP 2 C ? ? ? 1_555 D NLE 3 N ? ? D TRP 1628 D NLE 1629 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale9 covale both ? D NLE 3 C ? ? ? 1_555 D GLU 4 N ? ? D NLE 1629 D GLU 1630 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale10 covale both ? D LYS 35 C ? ? ? 1_555 D NH2 36 N ? ? D LYS 1661 D NH2 1662 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale11 covale both ? E ACE 1 C ? ? ? 1_555 E TRP 2 N ? ? E ACE 2627 E TRP 2628 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale12 covale both ? E TRP 2 C ? ? ? 1_555 E NLE 3 N ? ? E TRP 2628 E NLE 2629 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale13 covale both ? E NLE 3 C ? ? ? 1_555 E GLU 4 N ? ? E NLE 2629 E GLU 2630 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale14 covale both ? E LYS 35 C ? ? ? 1_555 E NH2 36 N ? ? E LYS 2661 E NH2 2662 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale15 covale both ? F ACE 1 C ? ? ? 1_555 F TRP 2 N ? ? F ACE 3627 F TRP 3628 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale16 covale both ? F TRP 2 C ? ? ? 1_555 F NLE 3 N ? ? F TRP 3628 F NLE 3629 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale17 covale both ? F NLE 3 C ? ? ? 1_555 F GLU 4 N ? ? F NLE 3629 F GLU 3630 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale18 covale both ? F LYS 35 C ? ? ? 1_555 F NH2 36 N ? ? F LYS 3661 F NH2 3662 1_555 ? ? ? ? ? ? ? 1.335 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NLE D 3 ? . . . . NLE D 1629 ? 1_555 . . . . . . . LEU 1 NLE Norleucine 'Named protein modification' 2 NLE E 3 ? . . . . NLE E 2629 ? 1_555 . . . . . . . LEU 1 NLE Norleucine 'Named protein modification' 3 NLE F 3 ? . . . . NLE F 3629 ? 1_555 . . . . . . . LEU 1 NLE Norleucine 'Named protein modification' 4 ACE A 1 ? SER A 2 ? ACE A 1545 ? 1_555 SER A 1546 ? 1_555 . . SER 6 ACE None 'Terminal acetylation' 5 ACE B 1 ? SER B 2 ? ACE B 2545 ? 1_555 SER B 2546 ? 1_555 . . SER 6 ACE None 'Terminal acetylation' 6 ACE C 1 ? SER C 2 ? ACE C 3545 ? 1_555 SER C 3546 ? 1_555 . . SER 6 ACE None 'Terminal acetylation' 7 ACE D 1 ? TRP D 2 ? ACE D 1627 ? 1_555 TRP D 1628 ? 1_555 . . TRP 16 ACE None 'Terminal acetylation' 8 ACE E 1 ? TRP E 2 ? ACE E 2627 ? 1_555 TRP E 2628 ? 1_555 . . TRP 16 ACE None 'Terminal acetylation' 9 ACE F 1 ? TRP F 2 ? ACE F 3627 ? 1_555 TRP F 3628 ? 1_555 . . TRP 16 ACE None 'Terminal acetylation' 10 NH2 A 38 ? LEU A 37 ? NH2 A 1582 ? 1_555 LEU A 1581 ? 1_555 . . LEU 14 NH2 None 'Terminal amidation' 11 NH2 B 38 ? LEU B 37 ? NH2 B 2582 ? 1_555 LEU B 2581 ? 1_555 . . LEU 14 NH2 None 'Terminal amidation' 12 NH2 C 38 ? LEU C 37 ? NH2 C 3582 ? 1_555 LEU C 3581 ? 1_555 . . LEU 14 NH2 None 'Terminal amidation' 13 NH2 D 36 ? LYS D 35 ? NH2 D 1662 ? 1_555 LYS D 1661 ? 1_555 . . LYS 20 NH2 None 'Terminal amidation' 14 NH2 E 36 ? LYS E 35 ? NH2 E 2662 ? 1_555 LYS E 2661 ? 1_555 . . LYS 20 NH2 None 'Terminal amidation' 15 NH2 F 36 ? LYS F 35 ? NH2 F 3662 ? 1_555 LYS F 3661 ? 1_555 . . LYS 20 NH2 None 'Terminal amidation' # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software E SO4 4001 ? 3 'BINDING SITE FOR RESIDUE SO4 E 4001' BC5 Software C ACY 5001 ? 3 'BINDING SITE FOR RESIDUE ACY C 5001' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 TRP D 2 ? TRP D 1628 . ? 3_664 ? 2 AC1 3 TRP E 2 ? TRP E 2628 . ? 1_555 ? 3 AC1 3 GLU E 4 ? GLU E 2630 . ? 1_555 ? 4 BC5 3 GLN C 6 ? GLN C 3550 . ? 5_665 ? 5 BC5 3 ARG C 35 ? ARG C 3579 . ? 1_555 ? 6 BC5 3 GLN F 26 ? GLN F 3652 . ? 5_665 ? # _pdbx_entry_details.entry_id 2Z2T _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 O B ILE 2580 ? ? C B ILE 2580 ? ? N B LEU 2581 ? ? 108.91 122.70 -13.79 1.60 Y 2 1 C D LEU 1660 ? ? N D LYS 1661 ? ? CA D LYS 1661 ? ? 137.92 121.70 16.22 2.50 Y # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 ILE B 2580 ? ? -15.13 2 1 LEU E 2660 ? ? -12.56 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 D NLE 3 D NLE 1629 ? LEU NORLEUCINE 2 E NLE 3 E NLE 2629 ? LEU NORLEUCINE 3 F NLE 3 F NLE 3629 ? LEU NORLEUCINE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ACY C C N N 8 ACY O O N N 9 ACY OXT O N N 10 ACY CH3 C N N 11 ACY HXT H N N 12 ACY H1 H N N 13 ACY H2 H N N 14 ACY H3 H N N 15 ALA N N N N 16 ALA CA C N S 17 ALA C C N N 18 ALA O O N N 19 ALA CB C N N 20 ALA OXT O N N 21 ALA H H N N 22 ALA H2 H N N 23 ALA HA H N N 24 ALA HB1 H N N 25 ALA HB2 H N N 26 ALA HB3 H N N 27 ALA HXT H N N 28 ARG N N N N 29 ARG CA C N S 30 ARG C C N N 31 ARG O O N N 32 ARG CB C N N 33 ARG CG C N N 34 ARG CD C N N 35 ARG NE N N N 36 ARG CZ C N N 37 ARG NH1 N N N 38 ARG NH2 N N N 39 ARG OXT O N N 40 ARG H H N N 41 ARG H2 H N N 42 ARG HA H N N 43 ARG HB2 H N N 44 ARG HB3 H N N 45 ARG HG2 H N N 46 ARG HG3 H N N 47 ARG HD2 H N N 48 ARG HD3 H N N 49 ARG HE H N N 50 ARG HH11 H N N 51 ARG HH12 H N N 52 ARG HH21 H N N 53 ARG HH22 H N N 54 ARG HXT H N N 55 ASN N N N N 56 ASN CA C N S 57 ASN C C N N 58 ASN O O N N 59 ASN CB C N N 60 ASN CG C N N 61 ASN OD1 O N N 62 ASN ND2 N N N 63 ASN OXT O N N 64 ASN H H N N 65 ASN H2 H N N 66 ASN HA H N N 67 ASN HB2 H N N 68 ASN HB3 H N N 69 ASN HD21 H N N 70 ASN HD22 H N N 71 ASN HXT H N N 72 ASP N N N N 73 ASP CA C N S 74 ASP C C N N 75 ASP O O N N 76 ASP CB C N N 77 ASP CG C N N 78 ASP OD1 O N N 79 ASP OD2 O N N 80 ASP OXT O N N 81 ASP H H N N 82 ASP H2 H N N 83 ASP HA H N N 84 ASP HB2 H N N 85 ASP HB3 H N N 86 ASP HD2 H N N 87 ASP HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 NH2 N N N N 231 NH2 HN1 H N N 232 NH2 HN2 H N N 233 NLE N N N N 234 NLE CA C N S 235 NLE C C N N 236 NLE O O N N 237 NLE OXT O N N 238 NLE CB C N N 239 NLE CG C N N 240 NLE CD C N N 241 NLE CE C N N 242 NLE H H N N 243 NLE H2 H N N 244 NLE HA H N N 245 NLE HXT H N N 246 NLE HB2 H N N 247 NLE HB3 H N N 248 NLE HG2 H N N 249 NLE HG3 H N N 250 NLE HD2 H N N 251 NLE HD3 H N N 252 NLE HE1 H N N 253 NLE HE2 H N N 254 NLE HE3 H N N 255 SER N N N N 256 SER CA C N S 257 SER C C N N 258 SER O O N N 259 SER CB C N N 260 SER OG O N N 261 SER OXT O N N 262 SER H H N N 263 SER H2 H N N 264 SER HA H N N 265 SER HB2 H N N 266 SER HB3 H N N 267 SER HG H N N 268 SER HXT H N N 269 SO4 S S N N 270 SO4 O1 O N N 271 SO4 O2 O N N 272 SO4 O3 O N N 273 SO4 O4 O N N 274 THR N N N N 275 THR CA C N S 276 THR C C N N 277 THR O O N N 278 THR CB C N R 279 THR OG1 O N N 280 THR CG2 C N N 281 THR OXT O N N 282 THR H H N N 283 THR H2 H N N 284 THR HA H N N 285 THR HB H N N 286 THR HG1 H N N 287 THR HG21 H N N 288 THR HG22 H N N 289 THR HG23 H N N 290 THR HXT H N N 291 TRP N N N N 292 TRP CA C N S 293 TRP C C N N 294 TRP O O N N 295 TRP CB C N N 296 TRP CG C Y N 297 TRP CD1 C Y N 298 TRP CD2 C Y N 299 TRP NE1 N Y N 300 TRP CE2 C Y N 301 TRP CE3 C Y N 302 TRP CZ2 C Y N 303 TRP CZ3 C Y N 304 TRP CH2 C Y N 305 TRP OXT O N N 306 TRP H H N N 307 TRP H2 H N N 308 TRP HA H N N 309 TRP HB2 H N N 310 TRP HB3 H N N 311 TRP HD1 H N N 312 TRP HE1 H N N 313 TRP HE3 H N N 314 TRP HZ2 H N N 315 TRP HZ3 H N N 316 TRP HH2 H N N 317 TRP HXT H N N 318 TYR N N N N 319 TYR CA C N S 320 TYR C C N N 321 TYR O O N N 322 TYR CB C N N 323 TYR CG C Y N 324 TYR CD1 C Y N 325 TYR CD2 C Y N 326 TYR CE1 C Y N 327 TYR CE2 C Y N 328 TYR CZ C Y N 329 TYR OH O N N 330 TYR OXT O N N 331 TYR H H N N 332 TYR H2 H N N 333 TYR HA H N N 334 TYR HB2 H N N 335 TYR HB3 H N N 336 TYR HD1 H N N 337 TYR HD2 H N N 338 TYR HE1 H N N 339 TYR HE2 H N N 340 TYR HH H N N 341 TYR HXT H N N 342 VAL N N N N 343 VAL CA C N S 344 VAL C C N N 345 VAL O O N N 346 VAL CB C N N 347 VAL CG1 C N N 348 VAL CG2 C N N 349 VAL OXT O N N 350 VAL H H N N 351 VAL H2 H N N 352 VAL HA H N N 353 VAL HB H N N 354 VAL HG11 H N N 355 VAL HG12 H N N 356 VAL HG13 H N N 357 VAL HG21 H N N 358 VAL HG22 H N N 359 VAL HG23 H N N 360 VAL HXT H N N 361 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ACY C O doub N N 7 ACY C OXT sing N N 8 ACY C CH3 sing N N 9 ACY OXT HXT sing N N 10 ACY CH3 H1 sing N N 11 ACY CH3 H2 sing N N 12 ACY CH3 H3 sing N N 13 ALA N CA sing N N 14 ALA N H sing N N 15 ALA N H2 sing N N 16 ALA CA C sing N N 17 ALA CA CB sing N N 18 ALA CA HA sing N N 19 ALA C O doub N N 20 ALA C OXT sing N N 21 ALA CB HB1 sing N N 22 ALA CB HB2 sing N N 23 ALA CB HB3 sing N N 24 ALA OXT HXT sing N N 25 ARG N CA sing N N 26 ARG N H sing N N 27 ARG N H2 sing N N 28 ARG CA C sing N N 29 ARG CA CB sing N N 30 ARG CA HA sing N N 31 ARG C O doub N N 32 ARG C OXT sing N N 33 ARG CB CG sing N N 34 ARG CB HB2 sing N N 35 ARG CB HB3 sing N N 36 ARG CG CD sing N N 37 ARG CG HG2 sing N N 38 ARG CG HG3 sing N N 39 ARG CD NE sing N N 40 ARG CD HD2 sing N N 41 ARG CD HD3 sing N N 42 ARG NE CZ sing N N 43 ARG NE HE sing N N 44 ARG CZ NH1 sing N N 45 ARG CZ NH2 doub N N 46 ARG NH1 HH11 sing N N 47 ARG NH1 HH12 sing N N 48 ARG NH2 HH21 sing N N 49 ARG NH2 HH22 sing N N 50 ARG OXT HXT sing N N 51 ASN N CA sing N N 52 ASN N H sing N N 53 ASN N H2 sing N N 54 ASN CA C sing N N 55 ASN CA CB sing N N 56 ASN CA HA sing N N 57 ASN C O doub N N 58 ASN C OXT sing N N 59 ASN CB CG sing N N 60 ASN CB HB2 sing N N 61 ASN CB HB3 sing N N 62 ASN CG OD1 doub N N 63 ASN CG ND2 sing N N 64 ASN ND2 HD21 sing N N 65 ASN ND2 HD22 sing N N 66 ASN OXT HXT sing N N 67 ASP N CA sing N N 68 ASP N H sing N N 69 ASP N H2 sing N N 70 ASP CA C sing N N 71 ASP CA CB sing N N 72 ASP CA HA sing N N 73 ASP C O doub N N 74 ASP C OXT sing N N 75 ASP CB CG sing N N 76 ASP CB HB2 sing N N 77 ASP CB HB3 sing N N 78 ASP CG OD1 doub N N 79 ASP CG OD2 sing N N 80 ASP OD2 HD2 sing N N 81 ASP OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 NH2 N HN1 sing N N 218 NH2 N HN2 sing N N 219 NLE N CA sing N N 220 NLE N H sing N N 221 NLE N H2 sing N N 222 NLE CA C sing N N 223 NLE CA CB sing N N 224 NLE CA HA sing N N 225 NLE C O doub N N 226 NLE C OXT sing N N 227 NLE OXT HXT sing N N 228 NLE CB CG sing N N 229 NLE CB HB2 sing N N 230 NLE CB HB3 sing N N 231 NLE CG CD sing N N 232 NLE CG HG2 sing N N 233 NLE CG HG3 sing N N 234 NLE CD CE sing N N 235 NLE CD HD2 sing N N 236 NLE CD HD3 sing N N 237 NLE CE HE1 sing N N 238 NLE CE HE2 sing N N 239 NLE CE HE3 sing N N 240 SER N CA sing N N 241 SER N H sing N N 242 SER N H2 sing N N 243 SER CA C sing N N 244 SER CA CB sing N N 245 SER CA HA sing N N 246 SER C O doub N N 247 SER C OXT sing N N 248 SER CB OG sing N N 249 SER CB HB2 sing N N 250 SER CB HB3 sing N N 251 SER OG HG sing N N 252 SER OXT HXT sing N N 253 SO4 S O1 doub N N 254 SO4 S O2 doub N N 255 SO4 S O3 sing N N 256 SO4 S O4 sing N N 257 THR N CA sing N N 258 THR N H sing N N 259 THR N H2 sing N N 260 THR CA C sing N N 261 THR CA CB sing N N 262 THR CA HA sing N N 263 THR C O doub N N 264 THR C OXT sing N N 265 THR CB OG1 sing N N 266 THR CB CG2 sing N N 267 THR CB HB sing N N 268 THR OG1 HG1 sing N N 269 THR CG2 HG21 sing N N 270 THR CG2 HG22 sing N N 271 THR CG2 HG23 sing N N 272 THR OXT HXT sing N N 273 TRP N CA sing N N 274 TRP N H sing N N 275 TRP N H2 sing N N 276 TRP CA C sing N N 277 TRP CA CB sing N N 278 TRP CA HA sing N N 279 TRP C O doub N N 280 TRP C OXT sing N N 281 TRP CB CG sing N N 282 TRP CB HB2 sing N N 283 TRP CB HB3 sing N N 284 TRP CG CD1 doub Y N 285 TRP CG CD2 sing Y N 286 TRP CD1 NE1 sing Y N 287 TRP CD1 HD1 sing N N 288 TRP CD2 CE2 doub Y N 289 TRP CD2 CE3 sing Y N 290 TRP NE1 CE2 sing Y N 291 TRP NE1 HE1 sing N N 292 TRP CE2 CZ2 sing Y N 293 TRP CE3 CZ3 doub Y N 294 TRP CE3 HE3 sing N N 295 TRP CZ2 CH2 doub Y N 296 TRP CZ2 HZ2 sing N N 297 TRP CZ3 CH2 sing Y N 298 TRP CZ3 HZ3 sing N N 299 TRP CH2 HH2 sing N N 300 TRP OXT HXT sing N N 301 TYR N CA sing N N 302 TYR N H sing N N 303 TYR N H2 sing N N 304 TYR CA C sing N N 305 TYR CA CB sing N N 306 TYR CA HA sing N N 307 TYR C O doub N N 308 TYR C OXT sing N N 309 TYR CB CG sing N N 310 TYR CB HB2 sing N N 311 TYR CB HB3 sing N N 312 TYR CG CD1 doub Y N 313 TYR CG CD2 sing Y N 314 TYR CD1 CE1 sing Y N 315 TYR CD1 HD1 sing N N 316 TYR CD2 CE2 doub Y N 317 TYR CD2 HD2 sing N N 318 TYR CE1 CZ doub Y N 319 TYR CE1 HE1 sing N N 320 TYR CE2 CZ sing Y N 321 TYR CE2 HE2 sing N N 322 TYR CZ OH sing N N 323 TYR OH HH sing N N 324 TYR OXT HXT sing N N 325 VAL N CA sing N N 326 VAL N H sing N N 327 VAL N H2 sing N N 328 VAL CA C sing N N 329 VAL CA CB sing N N 330 VAL CA HA sing N N 331 VAL C O doub N N 332 VAL C OXT sing N N 333 VAL CB CG1 sing N N 334 VAL CB CG2 sing N N 335 VAL CB HB sing N N 336 VAL CG1 HG11 sing N N 337 VAL CG1 HG12 sing N N 338 VAL CG1 HG13 sing N N 339 VAL CG2 HG21 sing N N 340 VAL CG2 HG22 sing N N 341 VAL CG2 HG23 sing N N 342 VAL OXT HXT sing N N 343 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1AIK _pdbx_initial_refinement_model.details 'PDB ENTRY 1AIK' # _atom_sites.entry_id 2Z2T _atom_sites.fract_transf_matrix[1][1] 0.009523 _atom_sites.fract_transf_matrix[1][2] 0.005498 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010996 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012770 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_