HEADER CHAPERONE 12-JUN-07 2Z46 TITLE CRYSTAL STRUCTURE OF NATIVE-ORF134 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ORF134; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 SYNONYM: RBCX; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCOCCUS SP.; SOURCE 3 STRAIN: PCC7002; SOURCE 4 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 5 EXPRESSION_SYSTEM_PLASMID: PIVEX3.2; SOURCE 6 OTHER_DETAILS: IN VITRO TRANSLATION KEYWDS CHAPERONE, HELIX BUNDLE EXPDTA X-RAY DIFFRACTION AUTHOR Y.TOMIMOTO,K.IHARA,T.ONIZUKA,S.KANAI,H.ASHIDA,A.YOKOTA,S.TANAKA, AUTHOR 2 H.MIYASAKA,Y.YAMADA,R.KATO,S.WAKATSUKI REVDAT 3 01-NOV-23 2Z46 1 REMARK REVDAT 2 24-FEB-09 2Z46 1 VERSN REVDAT 1 24-JUN-08 2Z46 0 JRNL AUTH Y.TOMIMOTO,K.IHARA,T.ONIZUKA,S.KANAI,H.ASHIDA,A.YOKOTA, JRNL AUTH 2 S.TANAKA,H.MIYASAKA,Y.YAMADA,R.KATO,S.WAKATSUKI JRNL TITL CRYSTAL STRUCTURE OF ORF134 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0034 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 37069 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.250 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1955 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.97 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2629 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.4230 REMARK 3 BIN FREE R VALUE SET COUNT : 145 REMARK 3 BIN FREE R VALUE : 0.4140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5347 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 90.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 71.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.44000 REMARK 3 B22 (A**2) : 0.44000 REMARK 3 B33 (A**2) : -0.89000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.438 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.318 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.252 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.646 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.924 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.899 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5419 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7302 ; 1.268 ; 1.984 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 652 ; 5.489 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 259 ;34.990 ;24.672 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1081 ;21.309 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;18.892 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 852 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3944 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2514 ; 0.213 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3775 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 115 ; 0.109 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 40 ; 0.169 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.181 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3369 ; 0.587 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5302 ; 1.067 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2265 ; 1.105 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2000 ; 2.007 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2Z46 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000027498. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-05 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9200 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37069 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.970 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.72600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2Z44 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4M NA ACETATE, 0.1M NA CACODYLATE , REMARK 280 PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 205.11100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 46.89700 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 46.89700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 102.55550 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 46.89700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 46.89700 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 307.66650 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 46.89700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 46.89700 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 102.55550 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 46.89700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.89700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 307.66650 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 205.11100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 111 REMARK 465 VAL A 112 REMARK 465 ASP A 113 REMARK 465 SER A 114 REMARK 465 SER A 115 REMARK 465 SER A 116 REMARK 465 THR A 117 REMARK 465 ASP A 118 REMARK 465 GLN A 119 REMARK 465 THR A 120 REMARK 465 GLU A 121 REMARK 465 PRO A 122 REMARK 465 ASN A 123 REMARK 465 PRO A 124 REMARK 465 GLY A 125 REMARK 465 GLU A 126 REMARK 465 SER A 127 REMARK 465 ASP A 128 REMARK 465 THR A 129 REMARK 465 SER A 130 REMARK 465 GLU A 131 REMARK 465 ASP A 132 REMARK 465 SER A 133 REMARK 465 GLU A 134 REMARK 465 MET B 1 REMARK 465 GLN B 111 REMARK 465 VAL B 112 REMARK 465 ASP B 113 REMARK 465 SER B 114 REMARK 465 SER B 115 REMARK 465 SER B 116 REMARK 465 THR B 117 REMARK 465 ASP B 118 REMARK 465 GLN B 119 REMARK 465 THR B 120 REMARK 465 GLU B 121 REMARK 465 PRO B 122 REMARK 465 ASN B 123 REMARK 465 PRO B 124 REMARK 465 GLY B 125 REMARK 465 GLU B 126 REMARK 465 SER B 127 REMARK 465 ASP B 128 REMARK 465 THR B 129 REMARK 465 SER B 130 REMARK 465 GLU B 131 REMARK 465 ASP B 132 REMARK 465 SER B 133 REMARK 465 GLU B 134 REMARK 465 MET C 1 REMARK 465 GLU C 2 REMARK 465 VAL C 112 REMARK 465 ASP C 113 REMARK 465 SER C 114 REMARK 465 SER C 115 REMARK 465 SER C 116 REMARK 465 THR C 117 REMARK 465 ASP C 118 REMARK 465 GLN C 119 REMARK 465 THR C 120 REMARK 465 GLU C 121 REMARK 465 PRO C 122 REMARK 465 ASN C 123 REMARK 465 PRO C 124 REMARK 465 GLY C 125 REMARK 465 GLU C 126 REMARK 465 SER C 127 REMARK 465 ASP C 128 REMARK 465 THR C 129 REMARK 465 SER C 130 REMARK 465 GLU C 131 REMARK 465 ASP C 132 REMARK 465 SER C 133 REMARK 465 GLU C 134 REMARK 465 GLN D 111 REMARK 465 VAL D 112 REMARK 465 ASP D 113 REMARK 465 SER D 114 REMARK 465 SER D 115 REMARK 465 SER D 116 REMARK 465 THR D 117 REMARK 465 ASP D 118 REMARK 465 GLN D 119 REMARK 465 THR D 120 REMARK 465 GLU D 121 REMARK 465 PRO D 122 REMARK 465 ASN D 123 REMARK 465 PRO D 124 REMARK 465 GLY D 125 REMARK 465 GLU D 126 REMARK 465 SER D 127 REMARK 465 ASP D 128 REMARK 465 THR D 129 REMARK 465 SER D 130 REMARK 465 GLU D 131 REMARK 465 ASP D 132 REMARK 465 SER D 133 REMARK 465 GLU D 134 REMARK 465 MET E 1 REMARK 465 GLU E 2 REMARK 465 ASP E 113 REMARK 465 SER E 114 REMARK 465 SER E 115 REMARK 465 SER E 116 REMARK 465 THR E 117 REMARK 465 ASP E 118 REMARK 465 GLN E 119 REMARK 465 THR E 120 REMARK 465 GLU E 121 REMARK 465 PRO E 122 REMARK 465 ASN E 123 REMARK 465 PRO E 124 REMARK 465 GLY E 125 REMARK 465 GLU E 126 REMARK 465 SER E 127 REMARK 465 ASP E 128 REMARK 465 THR E 129 REMARK 465 SER E 130 REMARK 465 GLU E 131 REMARK 465 ASP E 132 REMARK 465 SER E 133 REMARK 465 GLU E 134 REMARK 465 MET F 1 REMARK 465 ASP F 113 REMARK 465 SER F 114 REMARK 465 SER F 115 REMARK 465 SER F 116 REMARK 465 THR F 117 REMARK 465 ASP F 118 REMARK 465 GLN F 119 REMARK 465 THR F 120 REMARK 465 GLU F 121 REMARK 465 PRO F 122 REMARK 465 ASN F 123 REMARK 465 PRO F 124 REMARK 465 GLY F 125 REMARK 465 GLU F 126 REMARK 465 SER F 127 REMARK 465 ASP F 128 REMARK 465 THR F 129 REMARK 465 SER F 130 REMARK 465 GLU F 131 REMARK 465 ASP F 132 REMARK 465 SER F 133 REMARK 465 GLU F 134 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU F 105 CA - CB - CG ANGL. DEV. = 16.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 49 99.45 -59.09 REMARK 500 ASN A 64 81.10 -150.99 REMARK 500 LEU B 109 48.10 -95.47 REMARK 500 GLU C 63 -5.32 -153.86 REMARK 500 ASN C 64 83.11 -167.97 REMARK 500 ARG C 108 36.93 -88.30 REMARK 500 GLU D 63 -32.24 -130.06 REMARK 500 ASN D 64 78.74 -159.49 REMARK 500 ARG D 108 64.10 -106.15 REMARK 500 GLN E 29 -28.59 -39.07 REMARK 500 ASN E 34 77.77 -119.68 REMARK 500 ASN E 64 102.61 -161.37 REMARK 500 SER F 27 -14.89 -151.09 REMARK 500 GLU F 32 -77.95 -65.64 REMARK 500 SER F 53 -64.79 63.25 REMARK 500 GLU F 63 -94.44 -108.52 REMARK 500 LEU F 83 -1.89 -58.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Z44 RELATED DB: PDB REMARK 900 RELATED ID: 2Z45 RELATED DB: PDB DBREF 2Z46 A 1 134 UNP Q44177 Q44177_SYNP2 1 134 DBREF 2Z46 B 1 134 UNP Q44177 Q44177_SYNP2 1 134 DBREF 2Z46 C 1 134 UNP Q44177 Q44177_SYNP2 1 134 DBREF 2Z46 D 1 134 UNP Q44177 Q44177_SYNP2 1 134 DBREF 2Z46 E 1 134 UNP Q44177 Q44177_SYNP2 1 134 DBREF 2Z46 F 1 134 UNP Q44177 Q44177_SYNP2 1 134 SEQRES 1 A 134 MET GLU PHE LYS LYS VAL ALA LYS GLU THR ALA ILE THR SEQRES 2 A 134 LEU GLN SER TYR LEU THR TYR GLN ALA VAL ARG LEU ILE SEQRES 3 A 134 SER GLN GLN LEU SER GLU THR ASN PRO GLY GLN ALA ILE SEQRES 4 A 134 TRP LEU GLY GLU PHE SER LYS ARG HIS PRO ILE GLN GLU SEQRES 5 A 134 SER ASP LEU TYR LEU GLU ALA MET MET LEU GLU ASN LYS SEQRES 6 A 134 GLU LEU VAL LEU ARG ILE LEU THR VAL ARG GLU ASN LEU SEQRES 7 A 134 ALA GLU GLY VAL LEU GLU PHE LEU PRO GLU MET VAL LEU SEQRES 8 A 134 SER GLN ILE LYS GLN SER ASN GLY ASN HIS ARG ARG SER SEQRES 9 A 134 LEU LEU GLU ARG LEU THR GLN VAL ASP SER SER SER THR SEQRES 10 A 134 ASP GLN THR GLU PRO ASN PRO GLY GLU SER ASP THR SER SEQRES 11 A 134 GLU ASP SER GLU SEQRES 1 B 134 MET GLU PHE LYS LYS VAL ALA LYS GLU THR ALA ILE THR SEQRES 2 B 134 LEU GLN SER TYR LEU THR TYR GLN ALA VAL ARG LEU ILE SEQRES 3 B 134 SER GLN GLN LEU SER GLU THR ASN PRO GLY GLN ALA ILE SEQRES 4 B 134 TRP LEU GLY GLU PHE SER LYS ARG HIS PRO ILE GLN GLU SEQRES 5 B 134 SER ASP LEU TYR LEU GLU ALA MET MET LEU GLU ASN LYS SEQRES 6 B 134 GLU LEU VAL LEU ARG ILE LEU THR VAL ARG GLU ASN LEU SEQRES 7 B 134 ALA GLU GLY VAL LEU GLU PHE LEU PRO GLU MET VAL LEU SEQRES 8 B 134 SER GLN ILE LYS GLN SER ASN GLY ASN HIS ARG ARG SER SEQRES 9 B 134 LEU LEU GLU ARG LEU THR GLN VAL ASP SER SER SER THR SEQRES 10 B 134 ASP GLN THR GLU PRO ASN PRO GLY GLU SER ASP THR SER SEQRES 11 B 134 GLU ASP SER GLU SEQRES 1 C 134 MET GLU PHE LYS LYS VAL ALA LYS GLU THR ALA ILE THR SEQRES 2 C 134 LEU GLN SER TYR LEU THR TYR GLN ALA VAL ARG LEU ILE SEQRES 3 C 134 SER GLN GLN LEU SER GLU THR ASN PRO GLY GLN ALA ILE SEQRES 4 C 134 TRP LEU GLY GLU PHE SER LYS ARG HIS PRO ILE GLN GLU SEQRES 5 C 134 SER ASP LEU TYR LEU GLU ALA MET MET LEU GLU ASN LYS SEQRES 6 C 134 GLU LEU VAL LEU ARG ILE LEU THR VAL ARG GLU ASN LEU SEQRES 7 C 134 ALA GLU GLY VAL LEU GLU PHE LEU PRO GLU MET VAL LEU SEQRES 8 C 134 SER GLN ILE LYS GLN SER ASN GLY ASN HIS ARG ARG SER SEQRES 9 C 134 LEU LEU GLU ARG LEU THR GLN VAL ASP SER SER SER THR SEQRES 10 C 134 ASP GLN THR GLU PRO ASN PRO GLY GLU SER ASP THR SER SEQRES 11 C 134 GLU ASP SER GLU SEQRES 1 D 134 MET GLU PHE LYS LYS VAL ALA LYS GLU THR ALA ILE THR SEQRES 2 D 134 LEU GLN SER TYR LEU THR TYR GLN ALA VAL ARG LEU ILE SEQRES 3 D 134 SER GLN GLN LEU SER GLU THR ASN PRO GLY GLN ALA ILE SEQRES 4 D 134 TRP LEU GLY GLU PHE SER LYS ARG HIS PRO ILE GLN GLU SEQRES 5 D 134 SER ASP LEU TYR LEU GLU ALA MET MET LEU GLU ASN LYS SEQRES 6 D 134 GLU LEU VAL LEU ARG ILE LEU THR VAL ARG GLU ASN LEU SEQRES 7 D 134 ALA GLU GLY VAL LEU GLU PHE LEU PRO GLU MET VAL LEU SEQRES 8 D 134 SER GLN ILE LYS GLN SER ASN GLY ASN HIS ARG ARG SER SEQRES 9 D 134 LEU LEU GLU ARG LEU THR GLN VAL ASP SER SER SER THR SEQRES 10 D 134 ASP GLN THR GLU PRO ASN PRO GLY GLU SER ASP THR SER SEQRES 11 D 134 GLU ASP SER GLU SEQRES 1 E 134 MET GLU PHE LYS LYS VAL ALA LYS GLU THR ALA ILE THR SEQRES 2 E 134 LEU GLN SER TYR LEU THR TYR GLN ALA VAL ARG LEU ILE SEQRES 3 E 134 SER GLN GLN LEU SER GLU THR ASN PRO GLY GLN ALA ILE SEQRES 4 E 134 TRP LEU GLY GLU PHE SER LYS ARG HIS PRO ILE GLN GLU SEQRES 5 E 134 SER ASP LEU TYR LEU GLU ALA MET MET LEU GLU ASN LYS SEQRES 6 E 134 GLU LEU VAL LEU ARG ILE LEU THR VAL ARG GLU ASN LEU SEQRES 7 E 134 ALA GLU GLY VAL LEU GLU PHE LEU PRO GLU MET VAL LEU SEQRES 8 E 134 SER GLN ILE LYS GLN SER ASN GLY ASN HIS ARG ARG SER SEQRES 9 E 134 LEU LEU GLU ARG LEU THR GLN VAL ASP SER SER SER THR SEQRES 10 E 134 ASP GLN THR GLU PRO ASN PRO GLY GLU SER ASP THR SER SEQRES 11 E 134 GLU ASP SER GLU SEQRES 1 F 134 MET GLU PHE LYS LYS VAL ALA LYS GLU THR ALA ILE THR SEQRES 2 F 134 LEU GLN SER TYR LEU THR TYR GLN ALA VAL ARG LEU ILE SEQRES 3 F 134 SER GLN GLN LEU SER GLU THR ASN PRO GLY GLN ALA ILE SEQRES 4 F 134 TRP LEU GLY GLU PHE SER LYS ARG HIS PRO ILE GLN GLU SEQRES 5 F 134 SER ASP LEU TYR LEU GLU ALA MET MET LEU GLU ASN LYS SEQRES 6 F 134 GLU LEU VAL LEU ARG ILE LEU THR VAL ARG GLU ASN LEU SEQRES 7 F 134 ALA GLU GLY VAL LEU GLU PHE LEU PRO GLU MET VAL LEU SEQRES 8 F 134 SER GLN ILE LYS GLN SER ASN GLY ASN HIS ARG ARG SER SEQRES 9 F 134 LEU LEU GLU ARG LEU THR GLN VAL ASP SER SER SER THR SEQRES 10 F 134 ASP GLN THR GLU PRO ASN PRO GLY GLU SER ASP THR SER SEQRES 11 F 134 GLU ASP SER GLU HELIX 1 1 GLU A 2 ASN A 34 1 33 HELIX 2 2 ASN A 34 HIS A 48 1 15 HELIX 3 3 GLU A 52 ASN A 64 1 13 HELIX 4 4 ASN A 64 GLU A 84 1 21 HELIX 5 5 PHE A 85 ARG A 108 1 24 HELIX 6 6 GLU B 2 ASN B 34 1 33 HELIX 7 7 ASN B 34 HIS B 48 1 15 HELIX 8 8 GLU B 52 LEU B 62 1 11 HELIX 9 9 ASN B 64 LEU B 83 1 20 HELIX 10 10 PHE B 85 LEU B 109 1 25 HELIX 11 11 PHE C 3 ASN C 34 1 32 HELIX 12 12 GLN C 37 HIS C 48 1 12 HELIX 13 13 GLU C 52 MET C 61 1 10 HELIX 14 14 ASN C 64 LEU C 83 1 20 HELIX 15 15 PHE C 85 GLN C 111 1 27 HELIX 16 16 GLU D 2 ASN D 34 1 33 HELIX 17 17 ASN D 34 HIS D 48 1 15 HELIX 18 18 GLU D 52 LEU D 62 1 11 HELIX 19 19 ASN D 64 LEU D 83 1 20 HELIX 20 20 PHE D 85 GLU D 107 1 23 HELIX 21 21 PHE E 3 ASN E 34 1 32 HELIX 22 22 ASN E 34 HIS E 48 1 15 HELIX 23 23 GLU E 52 MET E 61 1 10 HELIX 24 24 ASN E 64 GLY E 81 1 18 HELIX 25 25 PHE E 85 THR E 110 1 26 HELIX 26 26 PHE F 3 ILE F 26 1 24 HELIX 27 27 GLN F 28 THR F 33 1 6 HELIX 28 28 ASN F 34 LYS F 46 1 13 HELIX 29 29 SER F 53 ASN F 64 1 12 HELIX 30 30 ASN F 64 LEU F 83 1 20 HELIX 31 31 PHE F 85 GLN F 111 1 27 CRYST1 93.794 93.794 410.222 90.00 90.00 90.00 P 41 21 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010662 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010662 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002438 0.00000