HEADER OXIDOREDUCTASE 01-AUG-07 2Z6J TITLE CRYSTAL STRUCTURE OF S. PNEUMONIAE ENOYL-ACYL CARRIER PROTEIN TITLE 2 REDUCTASE (FABK) IN COMPLEX WITH AN INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANS-2-ENOYL-ACP REDUCTASE II; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ENOYL-ACYL-CARRIER-PROTEIN, REDUCTASE; COMPND 5 EC: 1.3.1.9; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 1313; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET-21B(+) KEYWDS FATTY ACID SYNTHESIS, ANTIBIOTICS, OXIDOREDUCTASE, FLAVOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.SAITO,M.YAMADA,T.WATANABE,Y.TAKEUCHI REVDAT 3 01-NOV-23 2Z6J 1 REMARK SEQADV REVDAT 2 24-FEB-09 2Z6J 1 VERSN REVDAT 1 01-APR-08 2Z6J 0 JRNL AUTH J.SAITO,M.YAMADA,T.WATANABE,M.IIDA,H.KITAGAWA,S.TAKAHATA, JRNL AUTH 2 T.OZAWA,Y.TAKEUCHI,F.OHSAWA JRNL TITL CRYSTAL STRUCTURE OF ENOYL-ACYL CARRIER PROTEIN REDUCTASE JRNL TITL 2 (FABK) FROM STREPTOCOCCUS PNEUMONIAE REVEALS THE BINDING JRNL TITL 3 MODE OF AN INHIBITOR. JRNL REF PROTEIN SCI. V. 17 691 2008 JRNL REFN ISSN 0961-8368 JRNL PMID 18305197 JRNL DOI 10.1110/PS.073288808 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.9 REMARK 3 NUMBER OF REFLECTIONS : 24154 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.252 REMARK 3 R VALUE (WORKING SET) : 0.249 REMARK 3 FREE R VALUE : 0.306 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1288 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1666 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.54 REMARK 3 BIN R VALUE (WORKING SET) : 0.2570 REMARK 3 BIN FREE R VALUE SET COUNT : 98 REMARK 3 BIN FREE R VALUE : 0.3780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4507 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 140 REMARK 3 SOLVENT ATOMS : 72 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.52000 REMARK 3 B22 (A**2) : -2.73000 REMARK 3 B33 (A**2) : 1.28000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.62000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.568 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.326 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.229 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.273 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.905 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.859 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4707 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6357 ; 1.216 ; 2.004 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 608 ; 5.486 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 165 ;40.865 ;25.455 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 812 ;16.873 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;15.084 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 732 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3428 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2056 ; 0.188 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3193 ; 0.294 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 147 ; 0.142 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 4 ; 0.132 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 35 ; 0.245 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.320 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3109 ; 0.433 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4791 ; 0.756 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1843 ; 1.092 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1566 ; 1.740 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: AUTHOR SKIPPED THE MOLECULAR REMARK 3 REPLACEMENT AND DIRECTLY PROCEEDED TO RIGID BODY REFINEMENT REMARK 3 USING THE MODEL. HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2Z6J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-AUG-07. REMARK 100 THE DEPOSITION ID IS D_1000027583. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-APR-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : A FIXED EXIT SI DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR FOLLOWED REMARK 200 BYSTANDARD DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR AND RH-COATED REMARK 200 DOWNWARD-DEFLECTION MIRROR WITH REMARK 200 A TYPICAL GLANCING ANGLE OF 3.7 REMARK 200 MRAD. REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU JUPITER 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25448 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 29.080 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.9 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.16300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 2Z6I REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8-15% PEG 1000, 8-15% MPD, 0.1M MES PH REMARK 280 5.5-7.0, 0.1M AMMONIUM CHLORIDE, 0.2M CALCIUM CHLORIDE, 5MM REMARK 280 DITHIOTHREITOL , VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 63.24250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -87.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 224 REMARK 465 PHE A 225 REMARK 465 GLY A 226 REMARK 465 PHE A 248 REMARK 465 LYS A 249 REMARK 465 GLN A 250 REMARK 465 GLU A 251 REMARK 465 ASP A 252 REMARK 465 PRO A 253 REMARK 465 ASP A 254 REMARK 465 LEU A 255 REMARK 465 GLU A 256 REMARK 465 ILE A 257 REMARK 465 VAL A 321 REMARK 465 ARG A 322 REMARK 465 ASN A 323 REMARK 465 ASP A 324 REMARK 465 LEU A 325 REMARK 465 GLU A 326 REMARK 465 HIS A 327 REMARK 465 HIS A 328 REMARK 465 HIS A 329 REMARK 465 HIS A 330 REMARK 465 HIS A 331 REMARK 465 HIS A 332 REMARK 465 HIS B 224 REMARK 465 PHE B 225 REMARK 465 GLY B 226 REMARK 465 HIS B 227 REMARK 465 PHE B 248 REMARK 465 LYS B 249 REMARK 465 GLN B 250 REMARK 465 GLU B 251 REMARK 465 ASP B 252 REMARK 465 PRO B 253 REMARK 465 ASP B 254 REMARK 465 LEU B 255 REMARK 465 GLU B 256 REMARK 465 ILE B 257 REMARK 465 ARG B 322 REMARK 465 ASN B 323 REMARK 465 ASP B 324 REMARK 465 LEU B 325 REMARK 465 GLU B 326 REMARK 465 HIS B 327 REMARK 465 HIS B 328 REMARK 465 HIS B 329 REMARK 465 HIS B 330 REMARK 465 HIS B 331 REMARK 465 HIS B 332 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 22 -52.27 80.58 REMARK 500 ASN A 234 -165.58 -164.74 REMARK 500 TRP B 22 -48.36 74.00 REMARK 500 SER B 290 28.28 -150.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 603 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 158 O REMARK 620 2 ILE A 161 O 88.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 604 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA B 158 O REMARK 620 2 ILE B 161 O 77.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TUI A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TUI B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 701 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Z6I RELATED DB: PDB DBREF 2Z6J A 1 324 UNP Q9FBC5 Q9FBC5_STRPN 1 324 DBREF 2Z6J B 1 324 UNP Q9FBC5 Q9FBC5_STRPN 1 324 SEQADV 2Z6J LEU A 325 UNP Q9FBC5 EXPRESSION TAG SEQADV 2Z6J GLU A 326 UNP Q9FBC5 EXPRESSION TAG SEQADV 2Z6J HIS A 327 UNP Q9FBC5 EXPRESSION TAG SEQADV 2Z6J HIS A 328 UNP Q9FBC5 EXPRESSION TAG SEQADV 2Z6J HIS A 329 UNP Q9FBC5 EXPRESSION TAG SEQADV 2Z6J HIS A 330 UNP Q9FBC5 EXPRESSION TAG SEQADV 2Z6J HIS A 331 UNP Q9FBC5 EXPRESSION TAG SEQADV 2Z6J HIS A 332 UNP Q9FBC5 EXPRESSION TAG SEQADV 2Z6J LEU B 325 UNP Q9FBC5 EXPRESSION TAG SEQADV 2Z6J GLU B 326 UNP Q9FBC5 EXPRESSION TAG SEQADV 2Z6J HIS B 327 UNP Q9FBC5 EXPRESSION TAG SEQADV 2Z6J HIS B 328 UNP Q9FBC5 EXPRESSION TAG SEQADV 2Z6J HIS B 329 UNP Q9FBC5 EXPRESSION TAG SEQADV 2Z6J HIS B 330 UNP Q9FBC5 EXPRESSION TAG SEQADV 2Z6J HIS B 331 UNP Q9FBC5 EXPRESSION TAG SEQADV 2Z6J HIS B 332 UNP Q9FBC5 EXPRESSION TAG SEQRES 1 A 332 MET LYS THR ARG ILE THR GLU LEU LEU LYS ILE ASP TYR SEQRES 2 A 332 PRO ILE PHE GLN GLY GLY MET ALA TRP VAL ALA ASP GLY SEQRES 3 A 332 ASP LEU ALA GLY ALA VAL SER LYS ALA GLY GLY LEU GLY SEQRES 4 A 332 ILE ILE GLY GLY GLY ASN ALA PRO LYS GLU VAL VAL LYS SEQRES 5 A 332 ALA ASN ILE ASP LYS ILE LYS SER LEU THR ASP LYS PRO SEQRES 6 A 332 PHE GLY VAL ASN ILE MET LEU LEU SER PRO PHE VAL GLU SEQRES 7 A 332 ASP ILE VAL ASP LEU VAL ILE GLU GLU GLY VAL LYS VAL SEQRES 8 A 332 VAL THR THR GLY ALA GLY ASN PRO SER LYS TYR MET GLU SEQRES 9 A 332 ARG PHE HIS GLU ALA GLY ILE ILE VAL ILE PRO VAL VAL SEQRES 10 A 332 PRO SER VAL ALA LEU ALA LYS ARG MET GLU LYS ILE GLY SEQRES 11 A 332 ALA ASP ALA VAL ILE ALA GLU GLY MET GLU ALA GLY GLY SEQRES 12 A 332 HIS ILE GLY LYS LEU THR THR MET THR LEU VAL ARG GLN SEQRES 13 A 332 VAL ALA THR ALA ILE SER ILE PRO VAL ILE ALA ALA GLY SEQRES 14 A 332 GLY ILE ALA ASP GLY GLU GLY ALA ALA ALA GLY PHE MET SEQRES 15 A 332 LEU GLY ALA GLU ALA VAL GLN VAL GLY THR ARG PHE VAL SEQRES 16 A 332 VAL ALA LYS GLU SER ASN ALA HIS PRO ASN TYR LYS GLU SEQRES 17 A 332 LYS ILE LEU LYS ALA ARG ASP ILE ASP THR THR ILE SER SEQRES 18 A 332 ALA GLN HIS PHE GLY HIS ALA VAL ARG ALA ILE LYS ASN SEQRES 19 A 332 GLN LEU THR ARG ASP PHE GLU LEU ALA GLU LYS ASP ALA SEQRES 20 A 332 PHE LYS GLN GLU ASP PRO ASP LEU GLU ILE PHE GLU GLN SEQRES 21 A 332 MET GLY ALA GLY ALA LEU ALA LYS ALA VAL VAL HIS GLY SEQRES 22 A 332 ASP VAL ASP GLY GLY SER VAL MET ALA GLY GLN ILE ALA SEQRES 23 A 332 GLY LEU VAL SER LYS GLU GLU THR ALA GLU GLU ILE LEU SEQRES 24 A 332 LYS ASP LEU TYR TYR GLY ALA ALA LYS LYS ILE GLN GLU SEQRES 25 A 332 GLU ALA SER ARG TRP THR GLY VAL VAL ARG ASN ASP LEU SEQRES 26 A 332 GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 332 MET LYS THR ARG ILE THR GLU LEU LEU LYS ILE ASP TYR SEQRES 2 B 332 PRO ILE PHE GLN GLY GLY MET ALA TRP VAL ALA ASP GLY SEQRES 3 B 332 ASP LEU ALA GLY ALA VAL SER LYS ALA GLY GLY LEU GLY SEQRES 4 B 332 ILE ILE GLY GLY GLY ASN ALA PRO LYS GLU VAL VAL LYS SEQRES 5 B 332 ALA ASN ILE ASP LYS ILE LYS SER LEU THR ASP LYS PRO SEQRES 6 B 332 PHE GLY VAL ASN ILE MET LEU LEU SER PRO PHE VAL GLU SEQRES 7 B 332 ASP ILE VAL ASP LEU VAL ILE GLU GLU GLY VAL LYS VAL SEQRES 8 B 332 VAL THR THR GLY ALA GLY ASN PRO SER LYS TYR MET GLU SEQRES 9 B 332 ARG PHE HIS GLU ALA GLY ILE ILE VAL ILE PRO VAL VAL SEQRES 10 B 332 PRO SER VAL ALA LEU ALA LYS ARG MET GLU LYS ILE GLY SEQRES 11 B 332 ALA ASP ALA VAL ILE ALA GLU GLY MET GLU ALA GLY GLY SEQRES 12 B 332 HIS ILE GLY LYS LEU THR THR MET THR LEU VAL ARG GLN SEQRES 13 B 332 VAL ALA THR ALA ILE SER ILE PRO VAL ILE ALA ALA GLY SEQRES 14 B 332 GLY ILE ALA ASP GLY GLU GLY ALA ALA ALA GLY PHE MET SEQRES 15 B 332 LEU GLY ALA GLU ALA VAL GLN VAL GLY THR ARG PHE VAL SEQRES 16 B 332 VAL ALA LYS GLU SER ASN ALA HIS PRO ASN TYR LYS GLU SEQRES 17 B 332 LYS ILE LEU LYS ALA ARG ASP ILE ASP THR THR ILE SER SEQRES 18 B 332 ALA GLN HIS PHE GLY HIS ALA VAL ARG ALA ILE LYS ASN SEQRES 19 B 332 GLN LEU THR ARG ASP PHE GLU LEU ALA GLU LYS ASP ALA SEQRES 20 B 332 PHE LYS GLN GLU ASP PRO ASP LEU GLU ILE PHE GLU GLN SEQRES 21 B 332 MET GLY ALA GLY ALA LEU ALA LYS ALA VAL VAL HIS GLY SEQRES 22 B 332 ASP VAL ASP GLY GLY SER VAL MET ALA GLY GLN ILE ALA SEQRES 23 B 332 GLY LEU VAL SER LYS GLU GLU THR ALA GLU GLU ILE LEU SEQRES 24 B 332 LYS ASP LEU TYR TYR GLY ALA ALA LYS LYS ILE GLN GLU SEQRES 25 B 332 GLU ALA SER ARG TRP THR GLY VAL VAL ARG ASN ASP LEU SEQRES 26 B 332 GLU HIS HIS HIS HIS HIS HIS HET CA A 602 1 HET CA A 603 1 HET FMN A 401 31 HET TUI A 501 33 HET MPD A 701 8 HET CA B 601 1 HET CA B 604 1 HET FMN B 402 31 HET TUI B 502 33 HETNAM CA CALCIUM ION HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM TUI 2-(4-(2-((3-(5-(PYRIDIN-2-YLTHIO)THIAZOL-2-YL)UREIDO) HETNAM 2 TUI METHYL)-1H-IMIDAZOL-4-YL)PHENOXY)ACETIC ACID HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 3 CA 4(CA 2+) FORMUL 5 FMN 2(C17 H21 N4 O9 P) FORMUL 6 TUI 2(C21 H18 N6 O4 S2) FORMUL 7 MPD C6 H14 O2 FORMUL 12 HOH *72(H2 O) HELIX 1 1 THR A 3 LYS A 10 1 8 HELIX 2 2 ASP A 25 ALA A 35 1 11 HELIX 3 3 PRO A 47 SER A 60 1 14 HELIX 4 4 PHE A 76 GLU A 87 1 12 HELIX 5 5 PRO A 99 LYS A 101 5 3 HELIX 6 6 TYR A 102 ALA A 109 1 8 HELIX 7 7 SER A 119 GLY A 130 1 12 HELIX 8 8 THR A 149 ILE A 161 1 13 HELIX 9 9 ASP A 173 LEU A 183 1 11 HELIX 10 10 GLY A 191 VAL A 196 1 6 HELIX 11 11 HIS A 203 LYS A 212 1 10 HELIX 12 12 ASN A 234 ALA A 247 1 14 HELIX 13 13 PHE A 258 ALA A 263 1 6 HELIX 14 14 GLY A 264 VAL A 271 1 8 HELIX 15 15 GLY A 283 VAL A 289 5 7 HELIX 16 16 THR A 294 THR A 318 1 25 HELIX 17 17 THR B 3 LYS B 10 1 8 HELIX 18 18 ASP B 25 GLY B 36 1 12 HELIX 19 19 PRO B 47 SER B 60 1 14 HELIX 20 20 PHE B 76 GLY B 88 1 13 HELIX 21 21 PRO B 99 LYS B 101 5 3 HELIX 22 22 TYR B 102 ALA B 109 1 8 HELIX 23 23 SER B 119 ILE B 129 1 11 HELIX 24 24 THR B 149 ILE B 161 1 13 HELIX 25 25 ASP B 173 LEU B 183 1 11 HELIX 26 26 GLY B 191 VAL B 196 1 6 HELIX 27 27 HIS B 203 ALA B 213 1 11 HELIX 28 28 ASN B 234 ALA B 247 1 14 HELIX 29 29 PHE B 258 ALA B 263 1 6 HELIX 30 30 GLY B 264 GLY B 273 1 10 HELIX 31 31 GLY B 283 VAL B 289 5 7 HELIX 32 32 THR B 294 THR B 318 1 25 SHEET 1 A 8 ILE A 15 GLN A 17 0 SHEET 2 A 8 ALA A 187 VAL A 190 1 O VAL A 188 N PHE A 16 SHEET 3 A 8 VAL A 165 ALA A 168 1 N ALA A 167 O GLN A 189 SHEET 4 A 8 VAL A 134 GLU A 137 1 N ALA A 136 O ALA A 168 SHEET 5 A 8 ILE A 112 VAL A 117 1 N VAL A 117 O ILE A 135 SHEET 6 A 8 VAL A 91 GLY A 95 1 N VAL A 92 O ILE A 114 SHEET 7 A 8 PHE A 66 MET A 71 1 N ILE A 70 O THR A 93 SHEET 8 A 8 GLY A 39 GLY A 42 1 N ILE A 41 O ASN A 69 SHEET 1 B 3 GLY A 143 HIS A 144 0 SHEET 2 B 3 VAL A 229 ILE A 232 -1 O ARG A 230 N GLY A 143 SHEET 3 B 3 THR A 218 SER A 221 -1 N SER A 221 O VAL A 229 SHEET 1 C 8 ILE B 15 GLN B 17 0 SHEET 2 C 8 ALA B 187 VAL B 190 1 O VAL B 188 N PHE B 16 SHEET 3 C 8 VAL B 165 ALA B 168 1 N ALA B 167 O GLN B 189 SHEET 4 C 8 VAL B 134 GLU B 137 1 N ALA B 136 O ILE B 166 SHEET 5 C 8 ILE B 112 VAL B 117 1 N VAL B 117 O ILE B 135 SHEET 6 C 8 VAL B 91 GLY B 95 1 N VAL B 92 O ILE B 114 SHEET 7 C 8 PHE B 66 MET B 71 1 N ILE B 70 O THR B 93 SHEET 8 C 8 GLY B 39 GLY B 42 1 N ILE B 41 O ASN B 69 SHEET 1 D 3 GLY B 143 HIS B 144 0 SHEET 2 D 3 VAL B 229 ILE B 232 -1 O ARG B 230 N GLY B 143 SHEET 3 D 3 THR B 218 SER B 221 -1 N SER B 221 O VAL B 229 LINK O ALA A 158 CA CA A 603 1555 1555 2.20 LINK O ILE A 161 CA CA A 603 1555 1555 2.28 LINK OD1 ASN A 201 CA CA A 602 1555 1555 2.39 LINK O ALA B 158 CA CA B 604 1555 1555 2.39 LINK O ILE B 161 CA CA B 604 1555 1555 2.56 LINK OD1 ASN B 201 CA CA B 601 1555 1555 2.44 SITE 1 AC1 2 ALA A 158 ILE A 161 SITE 1 AC2 2 ALA B 158 ILE B 161 SITE 1 AC3 19 GLY A 18 GLY A 19 MET A 20 ALA A 21 SITE 2 AC3 19 ASN A 69 MET A 71 GLY A 95 GLU A 137 SITE 3 AC3 19 ALA A 141 GLY A 142 GLY A 169 GLY A 170 SITE 4 AC3 19 GLN A 189 GLY A 191 THR A 192 HOH A 702 SITE 5 AC3 19 HOH A 703 HOH A 708 HOH A 713 SITE 1 AC4 19 GLY B 18 GLY B 19 MET B 20 ALA B 21 SITE 2 AC4 19 ASN B 69 GLY B 95 GLU B 137 ALA B 141 SITE 3 AC4 19 GLY B 142 GLY B 169 GLY B 170 GLN B 189 SITE 4 AC4 19 GLY B 191 THR B 192 TYR B 206 HOH B 605 SITE 5 AC4 19 HOH B 607 HOH B 608 HOH B 620 SITE 1 AC5 9 ASN A 45 MET A 71 LEU A 73 ALA A 96 SITE 2 AC5 9 GLY A 97 LEU A 122 GLU A 137 HIS A 144 SITE 3 AC5 9 HOH A 718 SITE 1 AC6 9 ASN B 45 MET B 71 ALA B 96 GLY B 97 SITE 2 AC6 9 LEU B 122 GLU B 137 GLY B 143 HIS B 144 SITE 3 AC6 9 HOH B 634 SITE 1 AC7 6 THR A 3 ARG A 4 LEU A 236 ASP A 239 SITE 2 AC7 6 MET A 261 GLY A 277 CRYST1 50.630 126.485 53.522 90.00 112.04 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019751 0.000000 0.007994 0.00000 SCALE2 0.000000 0.007906 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020156 0.00000