HEADER ISOMERASE 16-AUG-07 2Z77 TITLE X-RAY CRYSTAL STRUCTURE OF RV0760C FROM MYCOBACTERIUM TUBERCULOSIS IN TITLE 2 COMPLEX WITH ESTRADIOL-17BETA-HEMISUCCINATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE STEROID ISOMERASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 ATCC: 25618; SOURCE 6 GENE: RV0760C, MT0785; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_VECTOR: PDEST15-RV0760C; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PGST-0760C KEYWDS ALPHA+BETA CONICAL BARREL, COMPLEX WITH ESTRADIOL-17BETA- KEYWDS 2 HEMISUCCINATE, STRUCTURAL GENOMICS, TB STRUCTURAL GENOMICS KEYWDS 3 CONSORTIUM, TBSGC, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.M.CHERNEY,C.R.GAREN,M.N.G.JAMES,TB STRUCTURAL GENOMICS CONSORTIUM AUTHOR 2 (TBSGC) REVDAT 6 30-AUG-23 2Z77 1 REMARK REVDAT 5 13-JUL-11 2Z77 1 VERSN REVDAT 4 24-FEB-09 2Z77 1 VERSN REVDAT 3 11-NOV-08 2Z77 1 JRNL REVDAT 2 09-SEP-08 2Z77 1 JRNL REVDAT 1 18-SEP-07 2Z77 0 JRNL AUTH M.M.CHERNEY,C.R.GAREN,M.N.JAMES JRNL TITL CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS RV0760C AT JRNL TITL 2 1.50 A RESOLUTION, A STRUCTURAL HOMOLOG OF JRNL TITL 3 DELTA(5)-3-KETOSTEROID ISOMERASE. JRNL REF BIOCHIM.BIOPHYS.ACTA V.1784 1625 2008 JRNL REFN ISSN 0006-3002 JRNL PMID 18589008 JRNL DOI 10.1016/J.BBAPAP.2008.05.012 REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.47 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 33416 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1740 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.03 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2396 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.2750 REMARK 3 BIN FREE R VALUE SET COUNT : 106 REMARK 3 BIN FREE R VALUE : 0.3800 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4051 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 98 REMARK 3 SOLVENT ATOMS : 355 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.84000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : 0.98000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.20000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.231 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.213 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.155 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.617 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4264 ; 0.018 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5798 ; 1.831 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 523 ; 6.992 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 193 ;35.080 ;24.145 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 660 ;16.338 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;20.777 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 644 ; 0.133 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3248 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1926 ; 0.213 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2816 ; 0.312 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 318 ; 0.164 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 77 ; 0.247 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 12 ; 0.184 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2697 ; 1.675 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4205 ; 2.492 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1810 ; 2.395 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1593 ; 3.275 ; 4.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2Z77 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-AUG-07. REMARK 100 THE DEPOSITION ID IS D_1000027607. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-SEP-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.11587 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35166 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04500 REMARK 200 FOR THE DATA SET : 17.0900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.7 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.42600 REMARK 200 FOR SHELL : 2.040 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2A15 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8% PEG 8000, 0.1M SODIUM ACETATE, PH REMARK 280 4.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.21400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: TWO MOLECULES IN THE ASYMMETRIC UNIT IS A BIOLOGICAL REMARK 300 ASSEMBLY REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1880 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1880 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4860 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5000 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -22.06714 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 77.21148 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 GLN A 3 REMARK 465 THR A 4 REMARK 465 THR A 5 REMARK 465 GLU A 139 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 GLN B 3 REMARK 465 THR B 4 REMARK 465 GLY B 136 REMARK 465 ASN B 137 REMARK 465 GLN B 138 REMARK 465 GLU B 139 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 GLN C 3 REMARK 465 THR C 4 REMARK 465 GLN C 138 REMARK 465 GLU C 139 REMARK 465 MET D 1 REMARK 465 THR D 2 REMARK 465 GLN D 3 REMARK 465 THR D 4 REMARK 465 THR D 5 REMARK 465 GLY D 136 REMARK 465 ASN D 137 REMARK 465 GLN D 138 REMARK 465 GLU D 139 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 19 CB CYS A 19 SG -0.139 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 THR A 104 C - N - CA ANGL. DEV. = 17.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 23 54.79 36.23 REMARK 500 ASN A 48 69.94 -151.28 REMARK 500 ASN A 71 147.75 -175.60 REMARK 500 LEU A 73 66.30 -108.68 REMARK 500 THR A 74 131.14 -38.94 REMARK 500 SER A 83 -149.74 -102.12 REMARK 500 THR A 104 79.93 89.90 REMARK 500 SER B 83 -162.59 -109.37 REMARK 500 ASN B 116 -169.96 -78.38 REMARK 500 GLU C 39 75.33 -105.46 REMARK 500 ASP C 100 80.98 4.29 REMARK 500 CYS D 19 29.59 -62.77 REMARK 500 VAL D 20 -35.17 -134.46 REMARK 500 HIS D 23 2.09 112.48 REMARK 500 ASP D 24 85.08 -51.89 REMARK 500 GLU D 58 -72.31 -53.13 REMARK 500 ILE D 68 -51.04 -126.05 REMARK 500 SER D 83 -163.89 -109.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT C 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HE7 B 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HE7 C 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HE7 A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCA D 200 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: RV0760C RELATED DB: TARGETDB REMARK 900 RELATED ID: 2A15 RELATED DB: PDB REMARK 900 X-RAY CRYSTAL STRUCTURE OF RV0760C FROM MYCOBACTERIUM TUBERCULOSIS REMARK 900 AT 1.68 ANGSTROM RESOLUTION REMARK 900 RELATED ID: 2Z76 RELATED DB: PDB REMARK 900 X-RAY CRYSTAL STRUCTURE OF RV0760C FROM MYCOBACTERIUM TUBERCULOSIS REMARK 900 AT 1.82 ANGSTROM RESOLUTION REMARK 900 RELATED ID: 2Z7A RELATED DB: PDB REMARK 900 X-RAY CRYSTAL STRUCTURE OF RV0760C FROM MYCOBACTERIUM TUBERCULOSIS REMARK 900 AT 2.10 ANGSTROM RESOLUTION DBREF 2Z77 A 1 139 UNP P71817 P71817_MYCTU 1 139 DBREF 2Z77 B 1 139 UNP P71817 P71817_MYCTU 1 139 DBREF 2Z77 C 1 139 UNP P71817 P71817_MYCTU 1 139 DBREF 2Z77 D 1 139 UNP P71817 P71817_MYCTU 1 139 SEQRES 1 A 139 MET THR GLN THR THR GLN SER PRO ALA LEU ILE ALA SER SEQRES 2 A 139 GLN SER SER TRP ARG CYS VAL GLN ALA HIS ASP ARG GLU SEQRES 3 A 139 GLY TRP LEU ALA LEU MET ALA ASP ASP VAL VAL ILE GLU SEQRES 4 A 139 ASP PRO ILE GLY LYS SER VAL THR ASN PRO ASP GLY SER SEQRES 5 A 139 GLY ILE LYS GLY LYS GLU ALA VAL GLY ALA PHE PHE ASP SEQRES 6 A 139 THR HIS ILE ALA ALA ASN ARG LEU THR VAL THR CYS GLU SEQRES 7 A 139 GLU THR PHE PRO SER SER SER PRO ASP GLU ILE ALA HIS SEQRES 8 A 139 ILE LEU VAL LEU HIS SER GLU PHE ASP GLY GLY PHE THR SEQRES 9 A 139 SER GLU VAL ARG GLY VAL PHE THR TYR ARG VAL ASN LYS SEQRES 10 A 139 ALA GLY LEU ILE THR ASN MET ARG GLY TYR TRP ASN LEU SEQRES 11 A 139 ASP MET MET THR PHE GLY ASN GLN GLU SEQRES 1 B 139 MET THR GLN THR THR GLN SER PRO ALA LEU ILE ALA SER SEQRES 2 B 139 GLN SER SER TRP ARG CYS VAL GLN ALA HIS ASP ARG GLU SEQRES 3 B 139 GLY TRP LEU ALA LEU MET ALA ASP ASP VAL VAL ILE GLU SEQRES 4 B 139 ASP PRO ILE GLY LYS SER VAL THR ASN PRO ASP GLY SER SEQRES 5 B 139 GLY ILE LYS GLY LYS GLU ALA VAL GLY ALA PHE PHE ASP SEQRES 6 B 139 THR HIS ILE ALA ALA ASN ARG LEU THR VAL THR CYS GLU SEQRES 7 B 139 GLU THR PHE PRO SER SER SER PRO ASP GLU ILE ALA HIS SEQRES 8 B 139 ILE LEU VAL LEU HIS SER GLU PHE ASP GLY GLY PHE THR SEQRES 9 B 139 SER GLU VAL ARG GLY VAL PHE THR TYR ARG VAL ASN LYS SEQRES 10 B 139 ALA GLY LEU ILE THR ASN MET ARG GLY TYR TRP ASN LEU SEQRES 11 B 139 ASP MET MET THR PHE GLY ASN GLN GLU SEQRES 1 C 139 MET THR GLN THR THR GLN SER PRO ALA LEU ILE ALA SER SEQRES 2 C 139 GLN SER SER TRP ARG CYS VAL GLN ALA HIS ASP ARG GLU SEQRES 3 C 139 GLY TRP LEU ALA LEU MET ALA ASP ASP VAL VAL ILE GLU SEQRES 4 C 139 ASP PRO ILE GLY LYS SER VAL THR ASN PRO ASP GLY SER SEQRES 5 C 139 GLY ILE LYS GLY LYS GLU ALA VAL GLY ALA PHE PHE ASP SEQRES 6 C 139 THR HIS ILE ALA ALA ASN ARG LEU THR VAL THR CYS GLU SEQRES 7 C 139 GLU THR PHE PRO SER SER SER PRO ASP GLU ILE ALA HIS SEQRES 8 C 139 ILE LEU VAL LEU HIS SER GLU PHE ASP GLY GLY PHE THR SEQRES 9 C 139 SER GLU VAL ARG GLY VAL PHE THR TYR ARG VAL ASN LYS SEQRES 10 C 139 ALA GLY LEU ILE THR ASN MET ARG GLY TYR TRP ASN LEU SEQRES 11 C 139 ASP MET MET THR PHE GLY ASN GLN GLU SEQRES 1 D 139 MET THR GLN THR THR GLN SER PRO ALA LEU ILE ALA SER SEQRES 2 D 139 GLN SER SER TRP ARG CYS VAL GLN ALA HIS ASP ARG GLU SEQRES 3 D 139 GLY TRP LEU ALA LEU MET ALA ASP ASP VAL VAL ILE GLU SEQRES 4 D 139 ASP PRO ILE GLY LYS SER VAL THR ASN PRO ASP GLY SER SEQRES 5 D 139 GLY ILE LYS GLY LYS GLU ALA VAL GLY ALA PHE PHE ASP SEQRES 6 D 139 THR HIS ILE ALA ALA ASN ARG LEU THR VAL THR CYS GLU SEQRES 7 D 139 GLU THR PHE PRO SER SER SER PRO ASP GLU ILE ALA HIS SEQRES 8 D 139 ILE LEU VAL LEU HIS SER GLU PHE ASP GLY GLY PHE THR SEQRES 9 D 139 SER GLU VAL ARG GLY VAL PHE THR TYR ARG VAL ASN LYS SEQRES 10 D 139 ALA GLY LEU ILE THR ASN MET ARG GLY TYR TRP ASN LEU SEQRES 11 D 139 ASP MET MET THR PHE GLY ASN GLN GLU HET HE7 A 200 27 HET ACT B 300 4 HET HE7 B 200 27 HET ACT C 400 4 HET HE7 C 200 27 HET NCA D 200 9 HETNAM HE7 4-{[(14BETA,17ALPHA)-3-HYDROXYESTRA-1,3,5(10)-TRIEN-17- HETNAM 2 HE7 YL]OXY}-4-OXOBUTANOIC ACID HETNAM ACT ACETATE ION HETNAM NCA NICOTINAMIDE HETSYN HE7 1,3,5(10)-ESTRATRIEN-3-[(17BETA)-DIOL]-17- HETSYN 2 HE7 HEMISUCCINATE; (17BETA-ESTRADIOL)-17-HEMISUCCINATE FORMUL 5 HE7 3(C22 H28 O5) FORMUL 6 ACT 2(C2 H3 O2 1-) FORMUL 10 NCA C6 H6 N2 O FORMUL 11 HOH *355(H2 O) HELIX 1 1 SER A 7 ALA A 22 1 16 HELIX 2 2 ASP A 24 LEU A 31 1 8 HELIX 3 3 GLY A 56 ALA A 69 1 14 HELIX 4 4 ASP A 100 GLY A 102 5 3 HELIX 5 5 ASN A 129 MET A 133 5 5 HELIX 6 6 SER B 7 ALA B 22 1 16 HELIX 7 7 ASP B 24 ALA B 30 1 7 HELIX 8 8 GLY B 56 ALA B 69 1 14 HELIX 9 9 ASN B 129 MET B 133 5 5 HELIX 10 10 SER C 7 HIS C 23 1 17 HELIX 11 11 ASP C 24 LEU C 31 1 8 HELIX 12 12 GLY C 56 ILE C 68 1 13 HELIX 13 13 ASN C 129 MET C 133 5 5 HELIX 14 14 SER D 7 ALA D 22 1 16 HELIX 15 15 ASP D 24 ALA D 30 1 7 HELIX 16 16 GLY D 56 ILE D 68 1 13 HELIX 17 17 ASN D 129 MET D 133 5 5 SHEET 1 A 6 ILE A 54 LYS A 55 0 SHEET 2 A 6 MET A 32 GLU A 39 -1 N ILE A 38 O ILE A 54 SHEET 3 A 6 ILE A 121 TYR A 127 1 O MET A 124 N GLU A 39 SHEET 4 A 6 THR A 104 VAL A 115 -1 N VAL A 110 O TYR A 127 SHEET 5 A 6 GLU A 88 GLU A 98 -1 N HIS A 91 O PHE A 111 SHEET 6 A 6 ARG A 72 PRO A 82 -1 N PHE A 81 O ALA A 90 SHEET 1 B 5 ILE A 54 LYS A 55 0 SHEET 2 B 5 MET A 32 GLU A 39 -1 N ILE A 38 O ILE A 54 SHEET 3 B 5 ILE A 121 TYR A 127 1 O MET A 124 N GLU A 39 SHEET 4 B 5 THR A 104 VAL A 115 -1 N VAL A 110 O TYR A 127 SHEET 5 B 5 THR A 134 PHE A 135 -1 O THR A 134 N GLU A 106 SHEET 1 C 6 ILE B 54 LYS B 55 0 SHEET 2 C 6 MET B 32 GLU B 39 -1 N ILE B 38 O ILE B 54 SHEET 3 C 6 ILE B 121 TYR B 127 1 O MET B 124 N GLU B 39 SHEET 4 C 6 THR B 104 VAL B 115 -1 N VAL B 110 O TYR B 127 SHEET 5 C 6 GLU B 88 PHE B 99 -1 N SER B 97 O SER B 105 SHEET 6 C 6 ASN B 71 PRO B 82 -1 N PHE B 81 O ALA B 90 SHEET 1 D 6 ILE C 54 LYS C 55 0 SHEET 2 D 6 MET C 32 GLU C 39 -1 N ILE C 38 O ILE C 54 SHEET 3 D 6 ILE C 121 TYR C 127 1 O MET C 124 N GLU C 39 SHEET 4 D 6 PHE C 103 VAL C 115 -1 N VAL C 110 O TYR C 127 SHEET 5 D 6 GLU C 88 PHE C 99 -1 N HIS C 91 O PHE C 111 SHEET 6 D 6 THR C 74 PRO C 82 -1 N PHE C 81 O ALA C 90 SHEET 1 E 5 ILE C 54 LYS C 55 0 SHEET 2 E 5 MET C 32 GLU C 39 -1 N ILE C 38 O ILE C 54 SHEET 3 E 5 ILE C 121 TYR C 127 1 O MET C 124 N GLU C 39 SHEET 4 E 5 PHE C 103 VAL C 115 -1 N VAL C 110 O TYR C 127 SHEET 5 E 5 THR C 134 PHE C 135 -1 O THR C 134 N GLU C 106 SHEET 1 F 6 ILE D 54 LYS D 55 0 SHEET 2 F 6 MET D 32 GLU D 39 -1 N ILE D 38 O ILE D 54 SHEET 3 F 6 ILE D 121 TYR D 127 1 O GLY D 126 N GLU D 39 SHEET 4 F 6 THR D 104 VAL D 115 -1 N VAL D 110 O TYR D 127 SHEET 5 F 6 GLU D 88 GLU D 98 -1 N LEU D 95 O VAL D 107 SHEET 6 F 6 THR D 74 PRO D 82 -1 N PHE D 81 O ALA D 90 CISPEP 1 ASP A 40 PRO A 41 0 0.79 CISPEP 2 PHE A 103 THR A 104 0 12.84 CISPEP 3 ASP B 40 PRO B 41 0 4.66 CISPEP 4 ASP C 40 PRO C 41 0 1.20 CISPEP 5 ASP D 40 PRO D 41 0 -1.76 SITE 1 AC1 1 ASP B 40 SITE 1 AC2 5 ALA C 70 ARG C 72 GLU C 98 ASP C 100 SITE 2 AC2 5 GLY C 101 SITE 1 AC3 16 VAL B 46 HIS B 67 ASN B 71 LEU B 73 SITE 2 AC3 16 LEU B 95 SER B 97 PHE B 99 SER B 105 SITE 3 AC3 16 PHE B 135 THR C 66 HIS C 67 PHE C 99 SITE 4 AC3 16 ASP C 100 PHE C 103 HE7 C 200 HOH C 427 SITE 1 AC4 16 LEU B 130 HE7 B 200 SER C 16 TRP C 17 SITE 2 AC4 16 VAL C 20 ASP C 40 VAL C 46 PHE C 63 SITE 3 AC4 16 HIS C 67 LEU C 73 VAL C 75 TYR C 113 SITE 4 AC4 16 MET C 124 TRP C 128 MET C 133 HOH C 476 SITE 1 AC5 12 ASP A 40 HIS A 67 LEU A 95 SER A 97 SITE 2 AC5 12 SER A 105 TRP A 128 MET A 133 HOH C 478 SITE 3 AC5 12 SER D 45 VAL D 46 LEU D 130 HOH D 213 SITE 1 AC6 8 SER D 16 TRP D 17 TRP D 28 ASP D 40 SITE 2 AC6 8 LEU D 73 PHE D 111 TYR D 113 MET D 124 CRYST1 55.906 66.428 80.303 90.00 105.95 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017887 0.000000 0.005112 0.00000 SCALE2 0.000000 0.015054 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012951 0.00000