HEADER BIOSYNTHETIC PROTEIN 19-SEP-07 2Z9F OBSLTE 06-OCT-10 2Z9F 3AJ2 TITLE CRYSTAL STRUCTURE OF AXCESD PROTEIN FROM ACETOBACTER XYLINUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELLULOSE SYNTHASE OPERON PROTEIN D; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACETOBACTER XYLINUS; SOURCE 3 ORGANISM_COMMON: GLUCONACETOBACTER XYLINUS; SOURCE 4 ORGANISM_TAXID: 28448; SOURCE 5 STRAIN: ATCC 23769; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B834; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-28 KEYWDS ALPHA AND BETA FOLD, OCTAMER, TETRAMER OF DIMERS, MOLECULE RING, KEYWDS 2 CELLULOSE BIOSYNTHESIS, STRUCTURAL GENOMICS, NPPSFA, NATIONAL KEYWDS 3 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, BIOSYNTHETIC KEYWDS 4 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.Q.HU,Y.G.GAO,M.YAO,K.TAJIMA,Y.ZHOU,I.TANAKA REVDAT 3 06-OCT-10 2Z9F 1 OBSLTE REVDAT 2 24-FEB-09 2Z9F 1 VERSN REVDAT 1 23-SEP-08 2Z9F 0 JRNL AUTH M.YAO,S.Q.HU,Y.G.GAO,K.TAJIMA,T.YODA,D.SHIMURA,Y.SATOH, JRNL AUTH 2 S.KAWANO,I.TANAKA,M.MUNEKATA JRNL TITL PURIFICATION, CRYSTALLIZATION AND PRELIMINARY X-RAY STUDIES JRNL TITL 2 OF AXCESD REQUIRED FOR EFFICIENT CELLULOSE BIOSYNTHESIS IN JRNL TITL 3 ACETOBACTER XYLINUM JRNL REF PROTEIN PEPT.LETT. V. 15 115 2008 JRNL REFN ISSN 0929-8665 JRNL PMID 18221022 JRNL DOI 10.2174/092986608783330422 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.Q.HU,Y.G.GAO,K.TAJIMA,N.SUNAGAWA,Y.ZHOU,S.KAWANO,T.YODA, REMARK 1 AUTH 2 D.SHIMURA,Y.SATOH,M.MUNEKATA REMARK 1 TITL STRUCTURE OF BACTERIAL CELLULOSE SYNTHASE SUBUNIT D OCTAMER REMARK 1 TITL 2 WITH FOUR INNER PASSAGEWAYS REMARK 1 REF PROC.NATL.ACAD.SCI.USA 2010 REMARK 1 REFN ESSN 1091-6490 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 24045 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.238 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2377 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.90 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3145 REMARK 3 BIN FREE R VALUE : 0.3308 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 236 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4581 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 291 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 65.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.90000 REMARK 3 B22 (A**2) : -3.90000 REMARK 3 B33 (A**2) : 7.80000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM SIGMAA (A) : 0.39 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.43 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.42 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.39 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.57 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.89 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2Z9F COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-OCT-07. REMARK 100 THE RCSB ID CODE IS RCSB027687. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27157 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 8.700 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 20.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.43200 REMARK 200 R SYM FOR SHELL (I) : 0.43200 REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2Z9E REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LI2SO4, 0.1M PHOSPHATE-CITRATE PH REMARK 280 5.4, 10% (V/V) ISO-PROPANOL, EVAPORATION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 66.67550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 66.67550 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 108.87950 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 66.67550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 54.43975 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 66.67550 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 163.31925 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 66.67550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 163.31925 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 66.67550 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 54.43975 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 66.67550 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 66.67550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 108.87950 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 66.67550 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 66.67550 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 108.87950 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 66.67550 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 163.31925 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 66.67550 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 54.43975 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 66.67550 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 54.43975 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 66.67550 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 163.31925 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 66.67550 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 66.67550 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 108.87950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20560 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 133.35100 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ILE A 3 REMARK 465 ASP A 136 REMARK 465 LEU A 137 REMARK 465 ASN A 138 REMARK 465 ARG A 152 REMARK 465 SER A 153 REMARK 465 SER A 154 REMARK 465 ALA A 155 REMARK 465 THR A 156 REMARK 465 LEU A 157 REMARK 465 GLU A 158 REMARK 465 HIS A 159 REMARK 465 HIS A 160 REMARK 465 HIS A 161 REMARK 465 HIS A 162 REMARK 465 HIS A 163 REMARK 465 HIS A 164 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 ILE B 3 REMARK 465 PHE B 4 REMARK 465 HIS B 163 REMARK 465 HIS B 164 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 ILE C 3 REMARK 465 GLU C 135 REMARK 465 ASP C 136 REMARK 465 LEU C 137 REMARK 465 ARG C 152 REMARK 465 SER C 153 REMARK 465 SER C 154 REMARK 465 ALA C 155 REMARK 465 THR C 156 REMARK 465 LEU C 157 REMARK 465 GLU C 158 REMARK 465 HIS C 159 REMARK 465 HIS C 160 REMARK 465 HIS C 161 REMARK 465 HIS C 162 REMARK 465 HIS C 163 REMARK 465 HIS C 164 REMARK 465 MET D 1 REMARK 465 THR D 2 REMARK 465 ILE D 3 REMARK 465 PHE D 4 REMARK 465 HIS D 162 REMARK 465 HIS D 163 REMARK 465 HIS D 164 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 4 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 5 CG CD OE1 OE2 REMARK 470 LYS A 6 CG CD CE NZ REMARK 470 GLU A 79 CG CD OE1 OE2 REMARK 470 SER A 118 OG REMARK 470 GLN A 119 CG CD OE1 NE2 REMARK 470 ASP A 125 CG OD1 OD2 REMARK 470 VAL A 127 CG1 CG2 REMARK 470 VAL A 128 CG1 CG2 REMARK 470 THR A 129 OG1 CG2 REMARK 470 GLU A 135 CG CD OE1 OE2 REMARK 470 VAL A 140 CG1 CG2 REMARK 470 GLU B 5 CG CD OE1 OE2 REMARK 470 PHE B 123 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP B 125 CG OD1 OD2 REMARK 470 ASP B 136 CG OD1 OD2 REMARK 470 LEU B 137 CG CD1 CD2 REMARK 470 LEU B 157 CG CD1 CD2 REMARK 470 GLU B 158 CG CD OE1 OE2 REMARK 470 HIS B 159 CG ND1 CD2 CE1 NE2 REMARK 470 HIS B 160 CG ND1 CD2 CE1 NE2 REMARK 470 HIS B 161 CG ND1 CD2 CE1 NE2 REMARK 470 HIS B 162 CG ND1 CD2 CE1 NE2 REMARK 470 PHE C 4 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU C 5 CG CD OE1 OE2 REMARK 470 LYS C 6 CG CD CE NZ REMARK 470 GLU C 79 CG CD OE1 OE2 REMARK 470 ASP C 80 CG OD1 OD2 REMARK 470 PHE C 123 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR C 126 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL C 128 CG1 CG2 REMARK 470 THR C 129 OG1 CG2 REMARK 470 ASN C 138 CG OD1 ND2 REMARK 470 GLU D 5 CG CD OE1 OE2 REMARK 470 LYS D 6 CG CD CE NZ REMARK 470 SER D 78 OG REMARK 470 GLU D 79 CG CD OE1 OE2 REMARK 470 GLN D 81 CG CD OE1 NE2 REMARK 470 PHE D 123 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU D 157 CG CD1 CD2 REMARK 470 GLU D 158 CG CD OE1 OE2 REMARK 470 HIS D 159 CG ND1 CD2 CE1 NE2 REMARK 470 HIS D 160 CG ND1 CD2 CE1 NE2 REMARK 470 HIS D 161 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ALA D 139 O HOH D 247 2.00 REMARK 500 N VAL A 116 O HOH A 203 2.04 REMARK 500 O TYR A 112 O HOH A 203 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 99 C - N - CA ANGL. DEV. = -16.0 DEGREES REMARK 500 PRO B 99 C - N - CD ANGL. DEV. = 12.6 DEGREES REMARK 500 ARG C 150 N - CA - C ANGL. DEV. = 17.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 5 96.54 60.71 REMARK 500 ASP A 80 -158.23 -137.44 REMARK 500 SER A 118 40.43 -78.90 REMARK 500 ALA A 120 -156.60 -72.39 REMARK 500 VAL A 132 19.60 -69.21 REMARK 500 LYS B 7 154.12 -49.76 REMARK 500 GLU B 98 -86.17 -44.82 REMARK 500 ALA B 122 -83.87 -7.02 REMARK 500 PHE B 123 -71.08 -77.27 REMARK 500 ASP B 125 25.02 -75.73 REMARK 500 LEU B 137 43.67 -88.47 REMARK 500 TRP C 103 -36.18 -38.74 REMARK 500 THR C 117 12.16 -56.44 REMARK 500 GLN C 119 -154.94 -112.66 REMARK 500 ALA C 122 93.45 -29.08 REMARK 500 PHE C 123 105.26 -17.10 REMARK 500 VAL C 127 141.53 -38.70 REMARK 500 VAL C 128 152.76 -48.25 REMARK 500 ARG C 150 -72.51 -130.28 REMARK 500 GLN D 81 5.38 81.32 REMARK 500 THR D 117 7.02 -68.30 REMARK 500 PRO D 141 152.06 -49.70 REMARK 500 SER D 153 172.81 171.39 REMARK 500 HIS D 160 -54.95 -120.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ARG C 150 23.1 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Z9E RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH N-TERMINUS HIS-TAG DBREF 2Z9F A 1 156 UNP P37719 ACSD_ACEXY 1 156 DBREF 2Z9F B 1 156 UNP P37719 ACSD_ACEXY 1 156 DBREF 2Z9F C 1 156 UNP P37719 ACSD_ACEXY 1 156 DBREF 2Z9F D 1 156 UNP P37719 ACSD_ACEXY 1 156 SEQADV 2Z9F LEU A 157 UNP P37719 EXPRESSION TAG SEQADV 2Z9F GLU A 158 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS A 159 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS A 160 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS A 161 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS A 162 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS A 163 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS A 164 UNP P37719 EXPRESSION TAG SEQADV 2Z9F LEU B 157 UNP P37719 EXPRESSION TAG SEQADV 2Z9F GLU B 158 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS B 159 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS B 160 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS B 161 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS B 162 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS B 163 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS B 164 UNP P37719 EXPRESSION TAG SEQADV 2Z9F LEU C 157 UNP P37719 EXPRESSION TAG SEQADV 2Z9F GLU C 158 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS C 159 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS C 160 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS C 161 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS C 162 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS C 163 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS C 164 UNP P37719 EXPRESSION TAG SEQADV 2Z9F LEU D 157 UNP P37719 EXPRESSION TAG SEQADV 2Z9F GLU D 158 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS D 159 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS D 160 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS D 161 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS D 162 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS D 163 UNP P37719 EXPRESSION TAG SEQADV 2Z9F HIS D 164 UNP P37719 EXPRESSION TAG SEQRES 1 A 164 MET THR ILE PHE GLU LYS LYS PRO ASP PHE THR LEU PHE SEQRES 2 A 164 LEU GLN THR LEU SER TRP GLU ILE ASP ASP GLN VAL GLY SEQRES 3 A 164 ILE GLU VAL ARG ASN GLU LEU LEU ARG GLU VAL GLY ARG SEQRES 4 A 164 GLY MET GLY THR ARG ILE MET PRO PRO PRO CYS GLN THR SEQRES 5 A 164 VAL ASP LYS LEU GLN ILE GLU LEU ASN ALA LEU LEU ALA SEQRES 6 A 164 LEU ILE GLY TRP GLY THR VAL THR LEU GLU LEU LEU SER SEQRES 7 A 164 GLU ASP GLN SER LEU ARG ILE VAL HIS GLU ASN LEU PRO SEQRES 8 A 164 GLN VAL GLY SER ALA GLY GLU PRO SER GLY THR TRP LEU SEQRES 9 A 164 ALA PRO VAL LEU GLU GLY LEU TYR GLY ARG TRP VAL THR SEQRES 10 A 164 SER GLN ALA GLY ALA PHE GLY ASP TYR VAL VAL THR ARG SEQRES 11 A 164 ASP VAL ASP ALA GLU ASP LEU ASN ALA VAL PRO ARG GLN SEQRES 12 A 164 THR ILE ILE MET TYR MET ARG VAL ARG SER SER ALA THR SEQRES 13 A 164 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 164 MET THR ILE PHE GLU LYS LYS PRO ASP PHE THR LEU PHE SEQRES 2 B 164 LEU GLN THR LEU SER TRP GLU ILE ASP ASP GLN VAL GLY SEQRES 3 B 164 ILE GLU VAL ARG ASN GLU LEU LEU ARG GLU VAL GLY ARG SEQRES 4 B 164 GLY MET GLY THR ARG ILE MET PRO PRO PRO CYS GLN THR SEQRES 5 B 164 VAL ASP LYS LEU GLN ILE GLU LEU ASN ALA LEU LEU ALA SEQRES 6 B 164 LEU ILE GLY TRP GLY THR VAL THR LEU GLU LEU LEU SER SEQRES 7 B 164 GLU ASP GLN SER LEU ARG ILE VAL HIS GLU ASN LEU PRO SEQRES 8 B 164 GLN VAL GLY SER ALA GLY GLU PRO SER GLY THR TRP LEU SEQRES 9 B 164 ALA PRO VAL LEU GLU GLY LEU TYR GLY ARG TRP VAL THR SEQRES 10 B 164 SER GLN ALA GLY ALA PHE GLY ASP TYR VAL VAL THR ARG SEQRES 11 B 164 ASP VAL ASP ALA GLU ASP LEU ASN ALA VAL PRO ARG GLN SEQRES 12 B 164 THR ILE ILE MET TYR MET ARG VAL ARG SER SER ALA THR SEQRES 13 B 164 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 164 MET THR ILE PHE GLU LYS LYS PRO ASP PHE THR LEU PHE SEQRES 2 C 164 LEU GLN THR LEU SER TRP GLU ILE ASP ASP GLN VAL GLY SEQRES 3 C 164 ILE GLU VAL ARG ASN GLU LEU LEU ARG GLU VAL GLY ARG SEQRES 4 C 164 GLY MET GLY THR ARG ILE MET PRO PRO PRO CYS GLN THR SEQRES 5 C 164 VAL ASP LYS LEU GLN ILE GLU LEU ASN ALA LEU LEU ALA SEQRES 6 C 164 LEU ILE GLY TRP GLY THR VAL THR LEU GLU LEU LEU SER SEQRES 7 C 164 GLU ASP GLN SER LEU ARG ILE VAL HIS GLU ASN LEU PRO SEQRES 8 C 164 GLN VAL GLY SER ALA GLY GLU PRO SER GLY THR TRP LEU SEQRES 9 C 164 ALA PRO VAL LEU GLU GLY LEU TYR GLY ARG TRP VAL THR SEQRES 10 C 164 SER GLN ALA GLY ALA PHE GLY ASP TYR VAL VAL THR ARG SEQRES 11 C 164 ASP VAL ASP ALA GLU ASP LEU ASN ALA VAL PRO ARG GLN SEQRES 12 C 164 THR ILE ILE MET TYR MET ARG VAL ARG SER SER ALA THR SEQRES 13 C 164 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 D 164 MET THR ILE PHE GLU LYS LYS PRO ASP PHE THR LEU PHE SEQRES 2 D 164 LEU GLN THR LEU SER TRP GLU ILE ASP ASP GLN VAL GLY SEQRES 3 D 164 ILE GLU VAL ARG ASN GLU LEU LEU ARG GLU VAL GLY ARG SEQRES 4 D 164 GLY MET GLY THR ARG ILE MET PRO PRO PRO CYS GLN THR SEQRES 5 D 164 VAL ASP LYS LEU GLN ILE GLU LEU ASN ALA LEU LEU ALA SEQRES 6 D 164 LEU ILE GLY TRP GLY THR VAL THR LEU GLU LEU LEU SER SEQRES 7 D 164 GLU ASP GLN SER LEU ARG ILE VAL HIS GLU ASN LEU PRO SEQRES 8 D 164 GLN VAL GLY SER ALA GLY GLU PRO SER GLY THR TRP LEU SEQRES 9 D 164 ALA PRO VAL LEU GLU GLY LEU TYR GLY ARG TRP VAL THR SEQRES 10 D 164 SER GLN ALA GLY ALA PHE GLY ASP TYR VAL VAL THR ARG SEQRES 11 D 164 ASP VAL ASP ALA GLU ASP LEU ASN ALA VAL PRO ARG GLN SEQRES 12 D 164 THR ILE ILE MET TYR MET ARG VAL ARG SER SER ALA THR SEQRES 13 D 164 LEU GLU HIS HIS HIS HIS HIS HIS FORMUL 5 HOH *291(H2 O) HELIX 1 1 PHE A 10 VAL A 25 1 16 HELIX 2 2 ILE A 27 THR A 43 1 17 HELIX 3 3 THR A 52 ILE A 67 1 16 HELIX 4 4 LEU A 104 SER A 118 1 15 HELIX 5 5 PHE B 10 VAL B 25 1 16 HELIX 6 6 GLY B 26 ILE B 45 1 20 HELIX 7 7 THR B 52 ILE B 67 1 16 HELIX 8 8 LEU B 104 THR B 117 1 14 HELIX 9 9 GLU B 135 ALA B 139 5 5 HELIX 10 10 LEU B 157 HIS B 161 5 5 HELIX 11 11 PHE C 10 VAL C 25 1 16 HELIX 12 12 GLY C 26 ILE C 45 1 20 HELIX 13 13 THR C 52 ILE C 67 1 16 HELIX 14 14 LEU C 104 THR C 117 1 14 HELIX 15 15 PHE D 10 VAL D 25 1 16 HELIX 16 16 GLY D 26 ILE D 45 1 20 HELIX 17 17 THR D 52 GLY D 68 1 17 HELIX 18 18 LEU D 104 THR D 117 1 14 SHEET 1 A 4 THR A 71 LEU A 76 0 SHEET 2 A 4 LEU A 83 GLU A 88 -1 O ARG A 84 N GLU A 75 SHEET 3 A 4 ILE A 145 ARG A 150 -1 O MET A 147 N ILE A 85 SHEET 4 A 4 VAL A 127 ARG A 130 -1 N THR A 129 O TYR A 148 SHEET 1 B 4 THR B 71 LEU B 76 0 SHEET 2 B 4 LEU B 83 GLU B 88 -1 O ARG B 84 N GLU B 75 SHEET 3 B 4 ILE B 145 VAL B 151 -1 O MET B 147 N ILE B 85 SHEET 4 B 4 TYR B 126 ARG B 130 -1 N VAL B 127 O ARG B 150 SHEET 1 C 4 THR C 71 LEU C 76 0 SHEET 2 C 4 LEU C 83 GLU C 88 -1 O ARG C 84 N GLU C 75 SHEET 3 C 4 ILE C 145 MET C 149 -1 O MET C 147 N ILE C 85 SHEET 4 C 4 THR C 129 ARG C 130 -1 N THR C 129 O TYR C 148 SHEET 1 D 4 THR D 71 LEU D 76 0 SHEET 2 D 4 LEU D 83 GLU D 88 -1 O ARG D 84 N GLU D 75 SHEET 3 D 4 ILE D 145 VAL D 151 -1 O MET D 147 N ILE D 85 SHEET 4 D 4 TYR D 126 ARG D 130 -1 N VAL D 127 O ARG D 150 CISPEP 1 GLU A 98 PRO A 99 0 -0.17 CISPEP 2 GLU C 98 PRO C 99 0 -0.20 CISPEP 3 GLU D 98 PRO D 99 0 0.37 CRYST1 133.351 133.351 217.759 90.00 90.00 90.00 I 41 2 2 64 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007499 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007499 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004592 0.00000