HEADER HYDROLASE 25-SEP-07 2Z9R OBSLTE 20-NOV-07 2Z9R 2ZBD TITLE CRYSTAL STRUCTURE OF THE SR CALCIUM PUMP WITH BOUND TITLE 2 ALUMINIUM FLUORIDE, ADP AND CALCIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM COMPND 3 ATPASE 1; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: CALCIUM PUMP 1, SERCA1, SR CA(2+)-ATPASE 1, COMPND 6 CALCIUM-TRANSPORTING ATPASE SARCOPLASMIC RETICULUM TYPE, COMPND 7 FAST TWITCH SKELETAL MUSCLE ISOFORM, ENDOPLASMIC RETICULUM COMPND 8 CLASS 1/2 CA(2+)ATPASE; COMPND 9 EC: 3.6.3.8 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: RABBIT; SOURCE 4 TISSUE: SKELETAL MUSCLE (WHITE) KEYWDS MEMBRANE PROTEIN, P-TYPE ATPASE, HAD FOLD, ALTERNATIVE KEYWDS 2 SPLICING, ATP-BINDING, CALCIUM, CALCIUM TRANSPORT, KEYWDS 3 ENDOPLASMIC RETICULUM, HYDROLASE, ION TRANSPORT, MAGNESIUM, KEYWDS 4 METAL-BINDING, NUCLEOTIDE-BINDING, PHOSPHORYLATION, KEYWDS 5 SARCOPLASMIC RETICULUM, TRANSMEMBRANE, TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR C.TOYOSHIMA,H.NOMURA,T.TSUDA REVDAT 2 20-NOV-07 2Z9R 1 OBSLTE REVDAT 1 09-OCT-07 2Z9R 0 SPRSDE 09-OCT-07 2Z9R 1WPE JRNL AUTH C.TOYOSHIMA,H.NOMURA,T.TSUDA JRNL TITL LUMENAL GATING MECHANISM REVEALED IN CALCIUM PUMP JRNL TITL 2 CRYSTAL STRUCTURES WITH PHOSPHATE ANALOGUES JRNL REF NATURE V. 432 361 2004 JRNL REFN ASTM NATUAS UK ISSN 0028-0836 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.TOYOSHIMA,M.NAKASAKO,H.NOMURA,H.OGAWA REMARK 1 TITL CRYSTAL STRUCTURE OF THE CALCIUM PUMP OF REMARK 1 TITL 2 SARCOPLASMIC RETICULUM AT 2.6 A RESOLUTION REMARK 1 REF NATURE V. 405 647 2000 REMARK 1 REFN ASTM NATUAS UK ISSN 0028-0836 REMARK 1 REFERENCE 2 REMARK 1 AUTH C.TOYOSHIMA,H.NOMURA REMARK 1 TITL STRUCTURAL CHANGES IN THE CALCIUM PUMP REMARK 1 TITL 2 ACCOMPANYING THE DISSOCIATION OF CALCIUM REMARK 1 REF NATURE V. 418 605 2002 REMARK 1 REFN ASTM NATUAS UK ISSN 0028-0836 REMARK 1 REFERENCE 3 REMARK 1 AUTH C.TOYOSHIMA,T.MIZUTANI REMARK 1 TITL CRYSTAL STRUCTURE OF THE CALCIUM PUMP WITH A BOUND REMARK 1 TITL 2 ATP ANALOGUE REMARK 1 REF NATURE V. 430 529 2004 REMARK 1 REFN ASTM NATUAS UK ISSN 0028-0836 REMARK 1 REFERENCE 4 REMARK 1 AUTH K.OBARA,N.MIYASHITA,C.XU,I.TOYOSHIMA,Y.SUGITA, REMARK 1 AUTH 2 G.INESI,C.TOYOSHIMA REMARK 1 TITL STRUCTURAL ROLE OF COUNTERTRANSPORT REVEALED IN REMARK 1 TITL 2 CA(2+) PUMP CRYSTAL STRUCTURE IN THE ABSENCE OF REMARK 1 TITL 3 CA(2+) REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 102 14489 2005 REMARK 1 REFN ASTM PNASA6 US ISSN 0027-8424 REMARK 1 REFERENCE 5 REMARK 1 AUTH M.TAKAHASHI,Y.KONDOU,C.TOYOSHIMA REMARK 1 TITL INTERDOMAIN COMMUNICATION IN CALCIUM PUMP AS REMARK 1 TITL 2 REVEALED IN THE CRYSTAL STRUCTURES WITH REMARK 1 TITL 3 TRANSMEMBRANE INHIBITORS REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 104 5800 2007 REMARK 1 REFN ASTM PNASA6 US ISSN 0027-8424 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 58529 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.243 REMARK 3 R VALUE (WORKING SET) : 0.242 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3111 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2702 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.4090 REMARK 3 BIN FREE R VALUE SET COUNT : 157 REMARK 3 BIN FREE R VALUE : 0.3640 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 ALL ATOMS : 7919 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 102.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.50000 REMARK 3 B22 (A**2) : 14.11000 REMARK 3 B33 (A**2) : -14.22000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -6.98000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.321 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.241 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.264 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 25.237 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7955 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10773 ; 1.228 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 993 ; 5.415 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 319 ;35.856 ;24.357 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1382 ;18.244 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;18.522 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1245 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5816 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3797 ; 0.200 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5486 ; 0.299 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 284 ; 0.131 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 9 ; 0.140 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 25 ; 0.127 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.185 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5084 ; 0.429 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8016 ; 0.767 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3218 ; 1.014 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2757 ; 1.598 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 0 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 0 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2Z9R COMPLIES WITH FORMAT V. 3.1, 1-AUG-2007 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ. REMARK 100 THE RCSB ID CODE IS RCSB027699. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUL-2005 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.10 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8000 REMARK 200 MONOCHROMATOR : ROTATED-INCLINED DOUBLE- REMARK 200 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61807 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.8 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 58.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.35000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1WPE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 400, PH 6.10, MICRODIALYSIS, REMARK 280 TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 1/2+X,1/2+Y,Z REMARK 290 4555 1/2-X,1/2+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 81.46600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.56850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 81.46600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 37.56850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMER REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMER REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI REMARK 500 OD1 ASP A 351 AL ALF A 998 1.89 REMARK 500 AL ALF A 998 O3B ADP A 1002 1.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCELIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 11 CD GLU A 11 OE1 0.125 REMARK 500 GLU A 11 CD GLU A 11 OE2 0.361 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 3 59.02 39.20 REMARK 500 LYS A 47 -89.89 -84.84 REMARK 500 GLU A 83 44.02 -92.50 REMARK 500 VAL A 155 134.04 -36.58 REMARK 500 LEU A 180 -76.92 -100.35 REMARK 500 ASN A 280 61.43 -112.08 REMARK 500 LYS A 352 -71.82 -87.84 REMARK 500 THR A 388 -168.20 -77.40 REMARK 500 PRO A 391 39.40 -72.63 REMARK 500 ASP A 399 7.03 81.95 REMARK 500 ASN A 453 79.43 -102.97 REMARK 500 LYS A 502 38.36 78.97 REMARK 500 SER A 503 -64.98 -129.37 REMARK 500 SER A 504 -77.31 -106.43 REMARK 500 ARG A 505 -6.85 -55.69 REMARK 500 VAL A 508 -85.35 -64.10 REMARK 500 GLU A 588 57.96 -100.99 REMARK 500 ASP A 601 84.93 -159.25 REMARK 500 ALA A 714 151.50 -47.74 REMARK 500 PRO A 820 156.73 -48.86 REMARK 500 MET A 857 -89.70 -102.81 REMARK 500 ALA A 859 100.47 -58.27 REMARK 500 HIS A 872 76.83 -114.96 REMARK 500 MET A 874 35.86 -88.12 REMARK 500 CYS A 888 41.75 -89.94 REMARK 500 GLU A 889 7.94 -158.40 REMARK 500 SER A 915 31.69 -84.76 REMARK 500 LEU A 992 -82.69 -72.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 996 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 304 O REMARK 620 2 ALA A 305 O 79.7 REMARK 620 3 ILE A 307 O 92.7 107.7 REMARK 620 4 GLU A 309 OE2 71.4 149.0 84.9 REMARK 620 5 ASN A 796 OD1 75.2 88.3 158.0 74.0 REMARK 620 6 ASP A 800 OD2 152.9 80.5 110.9 122.2 86.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 995 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 768 OD1 REMARK 620 2 GLU A 771 OE2 84.1 REMARK 620 3 THR A 799 OG1 169.5 100.4 REMARK 620 4 ASP A 800 OD1 87.7 151.2 83.9 REMARK 620 5 GLU A 908 OE2 118.4 76.1 72.0 131.4 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1SU4 RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH BOUND CALCIUM REMARK 900 RELATED ID: 1IWO RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITHOUT CALCIUM REMARK 900 RELATED ID: 1VFP RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH BOUND AMPPCP AND CALCIUM REMARK 900 RELATED ID: 1WPG RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH BOUND MAGNESIUM FLUORIDE AND REMARK 900 THAPSIGARGIN IN THE ABSENCE OF CALCIUM REMARK 900 RELATED ID: 2AGV RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH BOUND BHQ AND THAPSIGARGIN IN THE REMARK 900 ABSENCE OF CALCIUM REMARK 900 RELATED ID: 2DQS RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH BOUND AMPPCP IN THE ABSENCE OF CALCIUM REMARK 900 RELATED ID: 2EAR RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH BOUND TG REMARK 900 RELATED ID: 2EAS RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH BOUND CPA REMARK 900 RELATED ID: 2EAT RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH BOUND CPA AND TG REMARK 900 RELATED ID: 2EAU RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH BOUND CPA IN THE PRESENCE OF CURCUMIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE C-TERMINAL RESIDUES IN UNP ENTRY P04191 REMARK 999 ARE FROM 994 TO 1001, DPEDERRK. REMARK 999 IN ISOFORM SERCA1A, THERE IS ONLY ONE C-TERMINAL REMARK 999 RESIDUE 994 GLY. DBREF 2Z9R A 1 993 UNP P04191 AT2A1_RABIT 1 993 SEQADV 2Z9R GLY A 994 UNP P04191 SEE REMARK 999 SEQRES 1 A 994 MET GLU ALA ALA HIS SER LYS SER THR GLU GLU CYS LEU SEQRES 2 A 994 ALA TYR PHE GLY VAL SER GLU THR THR GLY LEU THR PRO SEQRES 3 A 994 ASP GLN VAL LYS ARG HIS LEU GLU LYS TYR GLY HIS ASN SEQRES 4 A 994 GLU LEU PRO ALA GLU GLU GLY LYS SER LEU TRP GLU LEU SEQRES 5 A 994 VAL ILE GLU GLN PHE GLU ASP LEU LEU VAL ARG ILE LEU SEQRES 6 A 994 LEU LEU ALA ALA CYS ILE SER PHE VAL LEU ALA TRP PHE SEQRES 7 A 994 GLU GLU GLY GLU GLU THR ILE THR ALA PHE VAL GLU PRO SEQRES 8 A 994 PHE VAL ILE LEU LEU ILE LEU ILE ALA ASN ALA ILE VAL SEQRES 9 A 994 GLY VAL TRP GLN GLU ARG ASN ALA GLU ASN ALA ILE GLU SEQRES 10 A 994 ALA LEU LYS GLU TYR GLU PRO GLU MET GLY LYS VAL TYR SEQRES 11 A 994 ARG ALA ASP ARG LYS SER VAL GLN ARG ILE LYS ALA ARG SEQRES 12 A 994 ASP ILE VAL PRO GLY ASP ILE VAL GLU VAL ALA VAL GLY SEQRES 13 A 994 ASP LYS VAL PRO ALA ASP ILE ARG ILE LEU SER ILE LYS SEQRES 14 A 994 SER THR THR LEU ARG VAL ASP GLN SER ILE LEU THR GLY SEQRES 15 A 994 GLU SER VAL SER VAL ILE LYS HIS THR GLU PRO VAL PRO SEQRES 16 A 994 ASP PRO ARG ALA VAL ASN GLN ASP LYS LYS ASN MET LEU SEQRES 17 A 994 PHE SER GLY THR ASN ILE ALA ALA GLY LYS ALA LEU GLY SEQRES 18 A 994 ILE VAL ALA THR THR GLY VAL SER THR GLU ILE GLY LYS SEQRES 19 A 994 ILE ARG ASP GLN MET ALA ALA THR GLU GLN ASP LYS THR SEQRES 20 A 994 PRO LEU GLN GLN LYS LEU ASP GLU PHE GLY GLU GLN LEU SEQRES 21 A 994 SER LYS VAL ILE SER LEU ILE CYS VAL ALA VAL TRP LEU SEQRES 22 A 994 ILE ASN ILE GLY HIS PHE ASN ASP PRO VAL HIS GLY GLY SEQRES 23 A 994 SER TRP ILE ARG GLY ALA ILE TYR TYR PHE LYS ILE ALA SEQRES 24 A 994 VAL ALA LEU ALA VAL ALA ALA ILE PRO GLU GLY LEU PRO SEQRES 25 A 994 ALA VAL ILE THR THR CYS LEU ALA LEU GLY THR ARG ARG SEQRES 26 A 994 MET ALA LYS LYS ASN ALA ILE VAL ARG SER LEU PRO SER SEQRES 27 A 994 VAL GLU THR LEU GLY CYS THR SER VAL ILE CYS SER ASP SEQRES 28 A 994 LYS THR GLY THR LEU THR THR ASN GLN MET SER VAL CYS SEQRES 29 A 994 LYS MET PHE ILE ILE ASP LYS VAL ASP GLY ASP PHE CYS SEQRES 30 A 994 SER LEU ASN GLU PHE SER ILE THR GLY SER THR TYR ALA SEQRES 31 A 994 PRO GLU GLY GLU VAL LEU LYS ASN ASP LYS PRO ILE ARG SEQRES 32 A 994 SER GLY GLN PHE ASP GLY LEU VAL GLU LEU ALA THR ILE SEQRES 33 A 994 CYS ALA LEU CYS ASN ASP SER SER LEU ASP PHE ASN GLU SEQRES 34 A 994 THR LYS GLY VAL TYR GLU LYS VAL GLY GLU ALA THR GLU SEQRES 35 A 994 THR ALA LEU THR THR LEU VAL GLU LYS MET ASN VAL PHE SEQRES 36 A 994 ASN THR GLU VAL ARG ASN LEU SER LYS VAL GLU ARG ALA SEQRES 37 A 994 ASN ALA CYS ASN SER VAL ILE ARG GLN LEU MET LYS LYS SEQRES 38 A 994 GLU PHE THR LEU GLU PHE SER ARG ASP ARG LYS SER MET SEQRES 39 A 994 SER VAL TYR CYS SER PRO ALA LYS SER SER ARG ALA ALA SEQRES 40 A 994 VAL GLY ASN LYS MET PHE VAL LYS GLY ALA PRO GLU GLY SEQRES 41 A 994 VAL ILE ASP ARG CYS ASN TYR VAL ARG VAL GLY THR THR SEQRES 42 A 994 ARG VAL PRO MET THR GLY PRO VAL LYS GLU LYS ILE LEU SEQRES 43 A 994 SER VAL ILE LYS GLU TRP GLY THR GLY ARG ASP THR LEU SEQRES 44 A 994 ARG CYS LEU ALA LEU ALA THR ARG ASP THR PRO PRO LYS SEQRES 45 A 994 ARG GLU GLU MET VAL LEU ASP ASP SER SER ARG PHE MET SEQRES 46 A 994 GLU TYR GLU THR ASP LEU THR PHE VAL GLY VAL VAL GLY SEQRES 47 A 994 MET LEU ASP PRO PRO ARG LYS GLU VAL MET GLY SER ILE SEQRES 48 A 994 GLN LEU CYS ARG ASP ALA GLY ILE ARG VAL ILE MET ILE SEQRES 49 A 994 THR GLY ASP ASN LYS GLY THR ALA ILE ALA ILE CYS ARG SEQRES 50 A 994 ARG ILE GLY ILE PHE GLY GLU ASN GLU GLU VAL ALA ASP SEQRES 51 A 994 ARG ALA TYR THR GLY ARG GLU PHE ASP ASP LEU PRO LEU SEQRES 52 A 994 ALA GLU GLN ARG GLU ALA CYS ARG ARG ALA CYS CYS PHE SEQRES 53 A 994 ALA ARG VAL GLU PRO SER HIS LYS SER LYS ILE VAL GLU SEQRES 54 A 994 TYR LEU GLN SER TYR ASP GLU ILE THR ALA MET THR GLY SEQRES 55 A 994 ASP GLY VAL ASN ASP ALA PRO ALA LEU LYS LYS ALA GLU SEQRES 56 A 994 ILE GLY ILE ALA MET GLY SER GLY THR ALA VAL ALA LYS SEQRES 57 A 994 THR ALA SER GLU MET VAL LEU ALA ASP ASP ASN PHE SER SEQRES 58 A 994 THR ILE VAL ALA ALA VAL GLU GLU GLY ARG ALA ILE TYR SEQRES 59 A 994 ASN ASN MET LYS GLN PHE ILE ARG TYR LEU ILE SER SER SEQRES 60 A 994 ASN VAL GLY GLU VAL VAL CYS ILE PHE LEU THR ALA ALA SEQRES 61 A 994 LEU GLY LEU PRO GLU ALA LEU ILE PRO VAL GLN LEU LEU SEQRES 62 A 994 TRP VAL ASN LEU VAL THR ASP GLY LEU PRO ALA THR ALA SEQRES 63 A 994 LEU GLY PHE ASN PRO PRO ASP LEU ASP ILE MET ASP ARG SEQRES 64 A 994 PRO PRO ARG SER PRO LYS GLU PRO LEU ILE SER GLY TRP SEQRES 65 A 994 LEU PHE PHE ARG TYR MET ALA ILE GLY GLY TYR VAL GLY SEQRES 66 A 994 ALA ALA THR VAL GLY ALA ALA ALA TRP TRP PHE MET TYR SEQRES 67 A 994 ALA GLU ASP GLY PRO GLY VAL THR TYR HIS GLN LEU THR SEQRES 68 A 994 HIS PHE MET GLN CYS THR GLU ASP HIS PRO HIS PHE GLU SEQRES 69 A 994 GLY LEU ASP CYS GLU ILE PHE GLU ALA PRO GLU PRO MET SEQRES 70 A 994 THR MET ALA LEU SER VAL LEU VAL THR ILE GLU MET CYS SEQRES 71 A 994 ASN ALA LEU ASN SER LEU SER GLU ASN GLN SER LEU MET SEQRES 72 A 994 ARG MET PRO PRO TRP VAL ASN ILE TRP LEU LEU GLY SER SEQRES 73 A 994 ILE CYS LEU SER MET SER LEU HIS PHE LEU ILE LEU TYR SEQRES 74 A 994 VAL ASP PRO LEU PRO MET ILE PHE LYS LEU LYS ALA LEU SEQRES 75 A 994 ASP LEU THR GLN TRP LEU MET VAL LEU LYS ILE SER LEU SEQRES 76 A 994 PRO VAL ILE GLY LEU ASP GLU ILE LEU LYS PHE ILE ALA SEQRES 77 A 994 ARG ASN TYR LEU GLU GLY HET CA A 995 1 HET CA A 996 1 HET MG A 997 1 HET ALF A 998 5 HET MG A1001 1 HET ACE A 0 3 HET ADP A1002 27 HET PC1 A1011 54 HET PC1 A1012 54 HETNAM CA CALCIUM ION HETNAM MG MAGNESIUM ION HETNAM ALF TETRAFLUOROALUMINATE ION HETNAM ACE ACETYL GROUP HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM PC1 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE HETSYN PC1 3-SN-PHOSPHATIDYLCHOLINE FORMUL 2 CA 2(CA 2+) FORMUL 4 MG 2(MG 2+) FORMUL 5 ALF AL F4 1- FORMUL 7 ACE C2 H4 O FORMUL 8 ADP C10 H15 N5 O10 P2 FORMUL 9 PC1 2(C44 H88 N O8 P) FORMUL 11 HOH *101(H2 O) HELIX 1 1 ALA A 3 LYS A 7 5 5 HELIX 2 2 SER A 8 GLY A 17 1 10 HELIX 3 3 THR A 25 GLY A 37 1 13 HELIX 4 4 LEU A 49 ILE A 54 1 6 HELIX 5 5 GLU A 55 GLU A 58 5 4 HELIX 6 6 ASP A 59 LEU A 75 1 17 HELIX 7 7 GLU A 80 GLU A 82 5 3 HELIX 8 8 GLU A 83 GLU A 121 1 39 HELIX 9 9 ARG A 143 ILE A 145 5 3 HELIX 10 10 GLN A 177 GLY A 182 1 6 HELIX 11 11 THR A 226 THR A 230 5 5 HELIX 12 12 THR A 247 ILE A 274 1 28 HELIX 13 13 ASN A 275 PHE A 279 5 5 HELIX 14 14 ILE A 289 ILE A 307 1 19 HELIX 15 15 GLU A 309 LYS A 328 1 20 HELIX 16 16 PRO A 337 CYS A 344 1 8 HELIX 17 17 ARG A 403 GLN A 406 5 4 HELIX 18 18 PHE A 407 CYS A 420 1 14 HELIX 19 19 GLU A 439 MET A 452 1 14 HELIX 20 20 SER A 463 ALA A 468 1 6 HELIX 21 21 ASN A 469 GLN A 477 1 9 HELIX 22 22 SER A 504 VAL A 508 5 5 HELIX 23 23 ALA A 517 ARG A 524 1 8 HELIX 24 24 THR A 538 GLY A 555 1 18 HELIX 25 25 LYS A 572 MET A 576 5 5 HELIX 26 26 ARG A 583 GLU A 588 1 6 HELIX 27 27 GLU A 606 ALA A 617 1 12 HELIX 28 28 ASN A 628 ILE A 639 1 12 HELIX 29 29 GLY A 655 ASP A 660 1 6 HELIX 30 30 PRO A 662 ALA A 673 1 12 HELIX 31 31 GLU A 680 TYR A 694 1 15 HELIX 32 32 ASP A 707 ALA A 714 1 8 HELIX 33 33 THR A 724 ALA A 730 1 7 HELIX 34 34 PHE A 740 GLY A 782 1 43 HELIX 35 35 ILE A 788 ASP A 800 1 13 HELIX 36 36 GLY A 801 ALA A 806 1 6 HELIX 37 37 LEU A 807 ASN A 810 5 4 HELIX 38 38 SER A 830 MET A 857 1 28 HELIX 39 39 GLU A 889 GLU A 892 5 4 HELIX 40 40 ALA A 893 SER A 915 1 23 HELIX 41 41 PRO A 926 VAL A 929 5 4 HELIX 42 42 ASN A 930 VAL A 950 1 21 HELIX 43 43 ASP A 951 PHE A 957 1 7 HELIX 44 44 GLN A 966 LEU A 975 1 10 HELIX 45 45 LEU A 975 ASN A 990 1 16 SHEET 1 A 6 GLN A 138 LYS A 141 0 SHEET 2 A 6 MET A 126 TYR A 130 -1 N GLY A 127 O ILE A 140 SHEET 3 A 6 ILE A 150 ALA A 154 -1 O ILE A 150 N TYR A 130 SHEET 4 A 6 LYS A 218 THR A 225 -1 O ALA A 219 N VAL A 153 SHEET 5 A 6 ASP A 162 ILE A 168 -1 N SER A 167 O LEU A 220 SHEET 6 A 6 MET A 207 LEU A 208 -1 O LEU A 208 N ILE A 163 SHEET 1 B 3 VAL A 187 ILE A 188 0 SHEET 2 B 3 ARG A 174 ASP A 176 -1 N VAL A 175 O VAL A 187 SHEET 3 B 3 ASN A 213 ALA A 216 -1 O ASN A 213 N ASP A 176 SHEET 1 C 8 ALA A 331 VAL A 333 0 SHEET 2 C 8 MET A 733 LEU A 735 -1 O VAL A 734 N ILE A 332 SHEET 3 C 8 ILE A 716 MET A 720 1 N ALA A 719 O LEU A 735 SHEET 4 C 8 THR A 698 GLY A 702 1 N MET A 700 O ILE A 718 SHEET 5 C 8 VAL A 347 SER A 350 1 N CYS A 349 O ALA A 699 SHEET 6 C 8 ARG A 620 ILE A 624 1 O ARG A 620 N ILE A 348 SHEET 7 C 8 CYS A 675 ALA A 677 1 O PHE A 676 N MET A 623 SHEET 8 C 8 ALA A 652 THR A 654 1 N TYR A 653 O ALA A 677 SHEET 1 D 9 LYS A 400 PRO A 401 0 SHEET 2 D 9 VAL A 395 LYS A 397 -1 N LYS A 397 O LYS A 400 SHEET 3 D 9 PHE A 376 ILE A 384 -1 N SER A 383 O LEU A 396 SHEET 4 D 9 SER A 362 ASP A 373 -1 N ILE A 368 O ASN A 380 SHEET 5 D 9 LEU A 591 LEU A 600 -1 O GLY A 598 N LYS A 365 SHEET 6 D 9 ARG A 560 ARG A 567 -1 N LEU A 564 O GLY A 595 SHEET 7 D 9 LYS A 511 GLY A 516 -1 N VAL A 514 O ALA A 565 SHEET 8 D 9 SER A 493 PRO A 500 -1 N CYS A 498 O LYS A 511 SHEET 9 D 9 MET A 479 SER A 488 -1 N LEU A 485 O SER A 495 SHEET 1 E 7 LYS A 400 PRO A 401 0 SHEET 2 E 7 VAL A 395 LYS A 397 -1 N LYS A 397 O LYS A 400 SHEET 3 E 7 PHE A 376 ILE A 384 -1 N SER A 383 O LEU A 396 SHEET 4 E 7 SER A 362 ASP A 373 -1 N ILE A 368 O ASN A 380 SHEET 5 E 7 LEU A 591 LEU A 600 -1 O GLY A 598 N LYS A 365 SHEET 6 E 7 CYS A 525 VAL A 530 1 N ARG A 529 O PHE A 593 SHEET 7 E 7 THR A 533 PRO A 536 -1 O VAL A 535 N VAL A 528 SHEET 1 F 2 SER A 424 ASN A 428 0 SHEET 2 F 2 VAL A 433 VAL A 437 -1 O GLU A 435 N ASP A 426 SSBOND 1 CYS A 876 CYS A 888 1555 1555 2.04 LINK C ACE A 0 N MET A 1 1555 1555 1.33 LINK O VAL A 304 CA CA A 996 1555 1555 2.64 LINK O ALA A 305 CA CA A 996 1555 1555 2.39 LINK O ILE A 307 CA CA A 996 1555 1555 2.25 LINK OE2 GLU A 309 CA CA A 996 1555 1555 2.24 LINK OD1 ASN A 768 CA CA A 995 1555 1555 2.31 LINK OE2 GLU A 771 CA CA A 995 1555 1555 2.39 LINK OD1 ASN A 796 CA CA A 996 1555 1555 2.27 LINK OG1 THR A 799 CA CA A 995 1555 1555 2.45 LINK OD1 ASP A 800 CA CA A 995 1555 1555 2.23 LINK OD2 ASP A 800 CA CA A 996 1555 1555 2.21 LINK OE2 GLU A 908 CA CA A 995 1555 1555 2.58 CRYST1 162.932 75.137 152.054 90.00 109.25 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006138 0.000000 0.002143 0.00000 SCALE2 0.000000 0.013309 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006966 0.00000