HEADER IMMUNE SYSTEM 26-SEP-07 2Z9T TITLE CRYSTAL STRUCTURE OF THE HUMAN BETA-2 MICROGLOBULIN MUTANT W60G COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NM_004048; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS BETA-2-MICROGLOBULIN, TRYPTOPHAN, GLYCINE, AMYLOIDOSIS, DRA, BETA KEYWDS 2 FIBRILS, DISEASE MUTATION, GLYCATION, GLYCOPROTEIN, IMMUNE RESPONSE, KEYWDS 3 IMMUNOGLOBULIN DOMAIN, MHC I, PYRROLIDONE CARBOXYLIC ACID, SECRETED, KEYWDS 4 IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR S.RICAGNO,M.BOLOGNESI,V.BELLOTTI,A.CORAZZA,E.RENNELLA,D.GURAL, AUTHOR 2 M.C.MIMMI,E.BETTO,C.PUCILLO,F.FOGOLARI,P.VIGLINO,S.RAIMONDI, AUTHOR 3 S.GIORGETTI,B.BOLOGNESI,G.MERLINI,M.STOPPINI REVDAT 6 01-NOV-23 2Z9T 1 REMARK REVDAT 5 10-NOV-21 2Z9T 1 SEQADV REVDAT 4 13-JUL-11 2Z9T 1 VERSN REVDAT 3 24-FEB-09 2Z9T 1 VERSN REVDAT 2 03-JUN-08 2Z9T 1 JRNL REVDAT 1 22-APR-08 2Z9T 0 JRNL AUTH G.ESPOSITO,S.RICAGNO,A.CORAZZA,E.RENNELLA,D.GUMRAL, JRNL AUTH 2 M.C.MIMMI,E.BETTO,C.E.M.PUCILLO,F.FOGOLARI,P.VIGLINO, JRNL AUTH 3 S.RAIMONDI,S.GIORGETTI,B.BOLOGNESI,G.MERLINI,M.STOPPINI, JRNL AUTH 4 M.BOLOGNESI,V.BELLOTTI JRNL TITL THE CONTROLLING ROLES OF TRP60 AND TRP95 IN JRNL TITL 2 BETA2-MICROGLOBULIN FUNCTION, FOLDING AND AMYLOID JRNL TITL 3 AGGREGATION PROPERTIES JRNL REF J.MOL.BIOL. V. 378 885 2008 JRNL REFN ISSN 0022-2836 JRNL PMID 18395224 JRNL DOI 10.1016/J.JMB.2008.03.002 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.16 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 3 NUMBER OF REFLECTIONS : 9273 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.300 REMARK 3 FREE R VALUE TEST SET COUNT : 489 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 638 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.21 REMARK 3 BIN R VALUE (WORKING SET) : 0.1720 REMARK 3 BIN FREE R VALUE SET COUNT : 45 REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 827 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 99 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 13.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 7.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.57000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : 0.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.21000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.143 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.133 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.569 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 874 ; 0.008 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 602 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1202 ; 1.241 ; 1.939 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1452 ; 0.807 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 115 ; 6.118 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 43 ;34.015 ;23.488 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 142 ;13.617 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;12.118 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 131 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1003 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 190 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 128 ; 0.233 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 602 ; 0.196 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 400 ; 0.172 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 493 ; 0.081 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 70 ; 0.176 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 14 ; 0.310 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 26 ; 0.244 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 13 ; 0.141 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 699 ; 0.487 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 208 ; 0.096 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 875 ; 0.614 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 404 ; 1.090 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 319 ; 1.512 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 10 REMARK 3 ORIGIN FOR THE GROUP (A): -5.2187 -6.5649 22.8606 REMARK 3 T TENSOR REMARK 3 T11: -0.0414 T22: -0.1102 REMARK 3 T33: -0.0327 T12: -0.0053 REMARK 3 T13: -0.0017 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 18.4849 L22: 2.4316 REMARK 3 L33: 8.2171 L12: -5.9240 REMARK 3 L13: 11.6623 L23: -4.1374 REMARK 3 S TENSOR REMARK 3 S11: 0.0546 S12: -0.4000 S13: -0.2157 REMARK 3 S21: -0.0084 S22: 0.1253 S23: 0.0447 REMARK 3 S31: 0.0487 S32: -0.3320 S33: -0.1799 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 11 A 20 REMARK 3 ORIGIN FOR THE GROUP (A): -25.1851 6.8145 14.7958 REMARK 3 T TENSOR REMARK 3 T11: 0.0035 T22: 0.0086 REMARK 3 T33: 0.0053 T12: 0.0420 REMARK 3 T13: 0.0312 T23: 0.0403 REMARK 3 L TENSOR REMARK 3 L11: 6.4261 L22: 2.3695 REMARK 3 L33: 7.4311 L12: -3.3608 REMARK 3 L13: -2.4495 L23: 0.0644 REMARK 3 S TENSOR REMARK 3 S11: 0.2831 S12: 0.3508 S13: 0.2945 REMARK 3 S21: -0.0137 S22: -0.1406 S23: 0.0743 REMARK 3 S31: -0.5128 S32: -0.4503 S33: -0.1425 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 21 A 30 REMARK 3 ORIGIN FOR THE GROUP (A): -12.6517 0.9179 17.9306 REMARK 3 T TENSOR REMARK 3 T11: -0.0535 T22: -0.1041 REMARK 3 T33: -0.0846 T12: 0.0087 REMARK 3 T13: 0.0072 T23: -0.0079 REMARK 3 L TENSOR REMARK 3 L11: 10.8574 L22: 2.9150 REMARK 3 L33: 6.8411 L12: -5.0763 REMARK 3 L13: 7.0960 L23: -4.3056 REMARK 3 S TENSOR REMARK 3 S11: -0.0368 S12: -0.1837 S13: 0.1384 REMARK 3 S21: 0.0344 S22: 0.0996 S23: -0.0309 REMARK 3 S31: -0.0356 S32: -0.3196 S33: -0.0629 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 31 A 40 REMARK 3 ORIGIN FOR THE GROUP (A): -1.3866 0.7033 18.2915 REMARK 3 T TENSOR REMARK 3 T11: -0.0599 T22: -0.1254 REMARK 3 T33: -0.0242 T12: 0.0041 REMARK 3 T13: -0.0175 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 5.4576 L22: 0.6196 REMARK 3 L33: 6.0410 L12: -1.2974 REMARK 3 L13: 3.8122 L23: -1.9234 REMARK 3 S TENSOR REMARK 3 S11: -0.0698 S12: 0.2299 S13: 0.1827 REMARK 3 S21: -0.0199 S22: -0.0232 S23: -0.1464 REMARK 3 S31: -0.1408 S32: 0.1411 S33: 0.0930 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 41 A 50 REMARK 3 ORIGIN FOR THE GROUP (A): -7.8270 7.3017 6.1859 REMARK 3 T TENSOR REMARK 3 T11: 0.0414 T22: 0.0721 REMARK 3 T33: 0.0228 T12: -0.0330 REMARK 3 T13: -0.0005 T23: 0.0631 REMARK 3 L TENSOR REMARK 3 L11: 2.0148 L22: 3.1880 REMARK 3 L33: 7.8090 L12: -0.2706 REMARK 3 L13: -0.1056 L23: 2.4961 REMARK 3 S TENSOR REMARK 3 S11: -0.0610 S12: 0.4556 S13: 0.4073 REMARK 3 S21: -0.2434 S22: 0.0630 S23: -0.2684 REMARK 3 S31: -0.4998 S32: 0.2855 S33: -0.0021 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 51 A 60 REMARK 3 ORIGIN FOR THE GROUP (A): -7.8090 3.5423 28.6924 REMARK 3 T TENSOR REMARK 3 T11: -0.0381 T22: -0.0605 REMARK 3 T33: -0.0296 T12: -0.0074 REMARK 3 T13: 0.0263 T23: -0.0241 REMARK 3 L TENSOR REMARK 3 L11: 4.1884 L22: 1.4782 REMARK 3 L33: 17.2563 L12: -0.6348 REMARK 3 L13: 3.2375 L23: -2.8206 REMARK 3 S TENSOR REMARK 3 S11: -0.0693 S12: -0.3724 S13: 0.1537 REMARK 3 S21: 0.0473 S22: 0.0737 S23: 0.0952 REMARK 3 S31: -0.1829 S32: 0.0893 S33: -0.0044 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 61 A 70 REMARK 3 ORIGIN FOR THE GROUP (A): -11.1793 3.9973 18.9643 REMARK 3 T TENSOR REMARK 3 T11: -0.0209 T22: -0.1116 REMARK 3 T33: -0.0622 T12: 0.0306 REMARK 3 T13: 0.0186 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 6.9961 L22: 1.1158 REMARK 3 L33: 9.1201 L12: -1.9871 REMARK 3 L13: 5.4515 L23: -3.1875 REMARK 3 S TENSOR REMARK 3 S11: -0.0617 S12: -0.0502 S13: 0.2518 REMARK 3 S21: 0.0565 S22: 0.0927 S23: 0.0413 REMARK 3 S31: -0.0773 S32: -0.2191 S33: -0.0310 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 71 A 80 REMARK 3 ORIGIN FOR THE GROUP (A): -15.9333 0.7070 2.6275 REMARK 3 T TENSOR REMARK 3 T11: 0.0285 T22: 0.0952 REMARK 3 T33: -0.0437 T12: -0.0089 REMARK 3 T13: -0.0118 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 4.3978 L22: 1.9907 REMARK 3 L33: 1.9967 L12: -0.8781 REMARK 3 L13: -0.0512 L23: 1.6970 REMARK 3 S TENSOR REMARK 3 S11: 0.1211 S12: 0.5135 S13: -0.2759 REMARK 3 S21: -0.3552 S22: 0.0172 S23: 0.2444 REMARK 3 S31: -0.1312 S32: -0.2657 S33: -0.1383 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 81 A 90 REMARK 3 ORIGIN FOR THE GROUP (A): 1.3587 -5.3320 14.4417 REMARK 3 T TENSOR REMARK 3 T11: -0.0421 T22: -0.0560 REMARK 3 T33: -0.0407 T12: 0.0247 REMARK 3 T13: 0.0024 T23: -0.0241 REMARK 3 L TENSOR REMARK 3 L11: 8.0994 L22: 2.2764 REMARK 3 L33: 2.5373 L12: -3.6495 REMARK 3 L13: 3.2615 L23: -2.3491 REMARK 3 S TENSOR REMARK 3 S11: 0.1583 S12: 0.6427 S13: 0.1310 REMARK 3 S21: -0.1626 S22: -0.3128 S23: -0.2512 REMARK 3 S31: 0.1382 S32: 0.3209 S33: 0.1545 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 91 A 97 REMARK 3 ORIGIN FOR THE GROUP (A): -12.8318 -5.9405 8.0798 REMARK 3 T TENSOR REMARK 3 T11: -0.0142 T22: -0.0103 REMARK 3 T33: -0.0340 T12: -0.0254 REMARK 3 T13: -0.0130 T23: -0.0341 REMARK 3 L TENSOR REMARK 3 L11: 27.8117 L22: 1.0528 REMARK 3 L33: 3.8104 L12: -2.5916 REMARK 3 L13: 6.6901 L23: 0.7129 REMARK 3 S TENSOR REMARK 3 S11: 0.3252 S12: 0.6301 S13: -0.7998 REMARK 3 S21: 0.0313 S22: -0.0174 S23: 0.0111 REMARK 3 S31: 0.2291 S32: -0.1235 S33: -0.3078 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2Z9T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-SEP-07. REMARK 100 THE DEPOSITION ID IS D_1000027701. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : L REMARK 200 WAVELENGTH OR RANGE (A) : 0.873 REMARK 200 MONOCHROMATOR : DIAMOND (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9273 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 19.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06800 REMARK 200 FOR THE DATA SET : 14.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.11200 REMARK 200 FOR SHELL : 8.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: LAUE REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1PY4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES, PEG 4000, AMMONIUM ACETATE, REMARK 280 GLYCEROL, PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 38.83900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 14.50700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 38.83900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 14.50700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -34.15234 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 48.30655 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 6 CD CE NZ REMARK 480 GLU A 16 CD OE1 OE2 REMARK 480 LYS A 19 CB CG CD CE NZ REMARK 480 GLU A 44 CD OE1 OE2 REMARK 480 LYS A 48 NZ REMARK 480 GLU A 50 OE2 REMARK 480 LYS A 58 CE NZ REMARK 480 GLU A 74 CG CD REMARK 480 LYS A 75 CG CD CE NZ REMARK 480 GLU A 77 CD OE1 OE2 REMARK 480 LYS A 94 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 83 O HOH A 174 2.01 REMARK 500 OD2 ASP A 34 O HOH A 155 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15480 RELATED DB: BMRB DBREF 2Z9T A 1 99 UNP P61769 B2MG_HUMAN 21 119 SEQADV 2Z9T MET A 0 UNP P61769 INITIATING METHIONINE SEQADV 2Z9T GLY A 60 UNP P61769 TRP 80 ENGINEERED MUTATION SEQRES 1 A 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 A 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 A 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 A 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 A 100 SER ASP LEU SER PHE SER LYS ASP GLY SER PHE TYR LEU SEQRES 6 A 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 A 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 A 100 LYS ILE VAL LYS TRP ASP ARG ASP MET FORMUL 2 HOH *99(H2 O) SHEET 1 A 4 LYS A 6 ARG A 12 0 SHEET 2 A 4 ASN A 21 PHE A 30 -1 O ASN A 24 N TYR A 10 SHEET 3 A 4 PHE A 62 PHE A 70 -1 O LEU A 64 N VAL A 27 SHEET 4 A 4 HIS A 51 PHE A 56 -1 N ASP A 53 O LEU A 65 SHEET 1 B 4 GLU A 44 ARG A 45 0 SHEET 2 B 4 GLU A 36 LYS A 41 -1 N LYS A 41 O GLU A 44 SHEET 3 B 4 TYR A 78 ASN A 83 -1 O ARG A 81 N ASP A 38 SHEET 4 B 4 LYS A 91 LYS A 94 -1 O VAL A 93 N CYS A 80 SSBOND 1 CYS A 25 CYS A 80 1555 1555 2.02 CISPEP 1 HIS A 31 PRO A 32 0 -3.16 CRYST1 77.678 29.014 59.160 90.00 125.26 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012874 0.000000 0.009100 0.00000 SCALE2 0.000000 0.034467 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020700 0.00000