HEADER LYASE 08-NOV-07 2ZCF TITLE MUTATIONAL STUDY ON ALPHA-GLN90 OF FE-TYPE NITRILE HYDRATASE FROM TITLE 2 RHODOCOCCUS SP. N771 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NITRILE HYDRATASE SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NITRILASE, NHASE; COMPND 5 EC: 4.2.1.84; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: NITRILE HYDRATASE SUBUNIT BETA; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: NITRILASE, NHASE; COMPND 12 EC: 4.2.1.84; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOCOCCUS ERYTHROPOLIS; SOURCE 3 ORGANISM_TAXID: 1833; SOURCE 4 GENE: NTHA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PRCN103, PHSG; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: RHODOCOCCUS ERYTHROPOLIS; SOURCE 11 ORGANISM_TAXID: 1833; SOURCE 12 GENE: NTHB; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PRCN103, PHSG KEYWDS CYSTEINE-SULFINIC ACID, CYSTEINE-SULFENIC ACID, PHOTO-REACTIVE, KEYWDS 2 NITRILE, HYDRATION, PHOTO-ACTIVATION, IRON, LYASE, METAL-BINDING, KEYWDS 3 OXIDATION, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 4 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 5 GENOMICS/PROTEOMICS INITIATIVE, RSGI EXPDTA X-RAY DIFFRACTION AUTHOR H.TAKARADA,Y.KAWANO,K.HASHIMOTO,H.NAKAYAMA,S.UEDA,M.YOHDA,N.KAMIYA, AUTHOR 2 N.DOHMAE,M.MAEDA,M.ODAKA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 3 INITIATIVE (RSGI) REVDAT 5 15-NOV-23 2ZCF 1 REMARK REVDAT 4 01-NOV-23 2ZCF 1 REMARK REVDAT 3 10-NOV-21 2ZCF 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 2ZCF 1 VERSN REVDAT 1 20-NOV-07 2ZCF 0 JRNL AUTH H.TAKARADA,Y.KAWANO,K.HASHIMOTO,H.NAKAYAMA,S.UEDA,M.YOHDA, JRNL AUTH 2 N.KAMIYA,N.DOHMAE,M.MAEDA,M.ODAKA JRNL TITL MUTATIONAL STUDY ON ALPHAGLN90 OF FE-TYPE NITRILE HYDRATASE JRNL TITL 2 FROM RHODOCOCCUS SP. N771 JRNL REF BIOSCI.BIOTECHNOL.BIOCHEM. V. 70 881 2006 JRNL REFN ISSN 0916-8451 JRNL PMID 16636455 JRNL DOI 10.1271/BBB.70.881 REMARK 2 REMARK 2 RESOLUTION. 1.43 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.43 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.4 REMARK 3 CROSS-VALIDATION METHOD : FREE R REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.170 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.169 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 11.200 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 8288 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 74058 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : 0.159 REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.159 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 11.100 REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 7153 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 64348 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3210 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 655 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 3865.2 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 0.00 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 0 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 15501 REMARK 3 NUMBER OF RESTRAINTS : 13344 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 ANGLE DISTANCES (A) : 0.026 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.000 REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.026 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.060 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.061 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.017 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : 0.000 REMARK 3 SIMILAR ADP COMPONENTS (A**2) : 0.055 REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : 0.000 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH & HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ANISOTROPIC REFINEMENT REDUCED FREE R REMARK 3 (NO CUTOFF) BY ? REMARK 4 REMARK 4 2ZCF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-NOV-07. REMARK 100 THE DEPOSITION ID IS D_1000027795. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : PT REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 85342 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.430 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.43 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.28000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.480 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 2AHJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG8000, MAGNESIUM CHLORIDE, 50MM TRIS REMARK 280 -HCL, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 57.41900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.27700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 57.41900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.27700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE SECOND PART OF THE BIOLOGICAL ASSEMBLY IS GENERATED REMARK 300 BY THE TWO FOLD AXIS: -X+2,Y,-Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18650 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 229.67600 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 479 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 493 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 509 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 708 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 VAL A 2 REMARK 465 THR A 3 REMARK 465 ILE A 4 REMARK 465 ASP A 5 REMARK 465 HIS A 6 REMARK 465 THR A 7 REMARK 465 VAL A 206 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 130 CB - CG - CD1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG A 138 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG A 174 NE - CZ - NH2 ANGL. DEV. = -5.1 DEGREES REMARK 500 ARG B 61 NE - CZ - NH1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG B 61 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG B 65 CD - NE - CZ ANGL. DEV. = 8.9 DEGREES REMARK 500 ARG B 65 NE - CZ - NH1 ANGL. DEV. = -6.9 DEGREES REMARK 500 ARG B 65 NE - CZ - NH2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG B 75 NE - CZ - NH2 ANGL. DEV. = 4.5 DEGREES REMARK 500 TYR B 76 CB - CG - CD2 ANGL. DEV. = -4.7 DEGREES REMARK 500 TYR B 76 CG - CD2 - CE2 ANGL. DEV. = -5.1 DEGREES REMARK 500 ARG B 107 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG B 114 NE - CZ - NH2 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG B 156 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ASP B 165 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 PHE B 184 CB - CG - CD2 ANGL. DEV. = 4.8 DEGREES REMARK 500 TYR B 207 CB - CG - CD2 ANGL. DEV. = -5.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 101 -9.83 -59.79 REMARK 500 CSD A 112 -91.08 -173.17 REMARK 500 SER A 113 4.94 -164.69 REMARK 500 ALA A 164 -132.58 -137.71 REMARK 500 ARG B 141 46.86 -104.21 REMARK 500 ASP B 193 58.17 -98.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 206 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 109 SG REMARK 620 2 CSD A 112 SG 90.6 REMARK 620 3 SER A 113 N 91.6 98.4 REMARK 620 4 CSO A 114 N 92.2 177.1 82.2 REMARK 620 5 CSO A 114 SG 83.5 92.8 167.8 86.8 REMARK 620 6 HOH A 207 O 174.9 86.0 92.6 91.2 92.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 213 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 478 O REMARK 620 2 HOH B 479 O 92.6 REMARK 620 3 HOH B 480 O 84.2 88.0 REMARK 620 4 HOH B 481 O 84.7 47.6 40.5 REMARK 620 5 HOH B 482 O 82.1 174.8 91.6 131.5 REMARK 620 6 HOH B 483 O 101.5 90.3 174.2 137.9 90.5 REMARK 620 7 HOH B 484 O 161.8 94.8 79.5 88.2 90.2 95.1 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 213 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1AHJ RELATED DB: PDB REMARK 900 WILD TYPE PROTEIN BUT DIFFERENT SOURCE REMARK 900 RELATED ID: 2AHJ RELATED DB: PDB REMARK 900 WILD TYPE PROTEIN FROM SAME SOURCE, DIFFERENT CRYSTAL SYSTEM REMARK 900 RELATED ID: 2CYZ RELATED DB: PDB REMARK 900 WILD TYPE PROTEIN FROM SAME SOURCE, SAME CRYSTAL SYSTEM, REMARK 900 CRYSTALLIZATION UNDER ANAEROBIC CONDITION REMARK 900 RELATED ID: 2CZ0 RELATED DB: PDB REMARK 900 WILD TYPE PROTEIN FROM SAME SOURCE, SAME CRYSTAL SYSTEM, REMARK 900 CRYSTALLIZATION UNDER AEROBIC CONDITION REMARK 900 RELATED ID: 2CZ1 RELATED DB: PDB REMARK 900 N-BA BINDING FORM OF WILD TYPE REMARK 900 RELATED ID: 2D0Q RELATED DB: PDB REMARK 900 INHIBITOR BINDING FORM OF WILD TYPE DBREF 2ZCF A 1 206 UNP P13448 NHAA_RHOER 2 207 DBREF 2ZCF B 1 212 UNP P13449 NHAB_RHOER 1 212 SEQADV 2ZCF ASN A 90 UNP P13448 GLN 91 ENGINEERED MUTATION SEQRES 1 A 206 SER VAL THR ILE ASP HIS THR THR GLU ASN ALA ALA PRO SEQRES 2 A 206 ALA GLN ALA PRO VAL SER ASP ARG ALA TRP ALA LEU PHE SEQRES 3 A 206 ARG ALA LEU ASP GLY LYS GLY LEU VAL PRO ASP GLY TYR SEQRES 4 A 206 VAL GLU GLY TRP LYS LYS THR PHE GLU GLU ASP PHE SER SEQRES 5 A 206 PRO ARG ARG GLY ALA GLU LEU VAL ALA ARG ALA TRP THR SEQRES 6 A 206 ASP PRO GLU PHE ARG GLN LEU LEU LEU THR ASP GLY THR SEQRES 7 A 206 ALA ALA VAL ALA GLN TYR GLY TYR LEU GLY PRO ASN GLY SEQRES 8 A 206 GLU TYR ILE VAL ALA VAL GLU ASP THR PRO THR LEU LYS SEQRES 9 A 206 ASN VAL ILE VAL CYS SER LEU CSD SER CSO THR ALA TRP SEQRES 10 A 206 PRO ILE LEU GLY LEU PRO PRO THR TRP TYR LYS SER PHE SEQRES 11 A 206 GLU TYR ARG ALA ARG VAL VAL ARG GLU PRO ARG LYS VAL SEQRES 12 A 206 LEU SER GLU MET GLY THR GLU ILE ALA SER ASP ILE GLU SEQRES 13 A 206 ILE ARG VAL TYR ASP THR THR ALA GLU THR ARG TYR MET SEQRES 14 A 206 VAL LEU PRO GLN ARG PRO ALA GLY THR GLU GLY TRP SER SEQRES 15 A 206 GLN GLU GLN LEU GLN GLU ILE VAL THR LYS ASP CYS LEU SEQRES 16 A 206 ILE GLY VAL ALA ILE PRO GLN VAL PRO THR VAL SEQRES 1 B 212 MET ASP GLY VAL HIS ASP LEU ALA GLY VAL GLN GLY PHE SEQRES 2 B 212 GLY LYS VAL PRO HIS THR VAL ASN ALA ASP ILE GLY PRO SEQRES 3 B 212 THR PHE HIS ALA GLU TRP GLU HIS LEU PRO TYR SER LEU SEQRES 4 B 212 MET PHE ALA GLY VAL ALA GLU LEU GLY ALA PHE SER VAL SEQRES 5 B 212 ASP GLU VAL ARG TYR VAL VAL GLU ARG MET GLU PRO ARG SEQRES 6 B 212 HIS TYR MET MET THR PRO TYR TYR GLU ARG TYR VAL ILE SEQRES 7 B 212 GLY VAL ALA THR LEU MET VAL GLU LYS GLY ILE LEU THR SEQRES 8 B 212 GLN ASP GLU LEU GLU SER LEU ALA GLY GLY PRO PHE PRO SEQRES 9 B 212 LEU SER ARG PRO SER GLU SER GLU GLY ARG PRO ALA PRO SEQRES 10 B 212 VAL GLU THR THR THR PHE GLU VAL GLY GLN ARG VAL ARG SEQRES 11 B 212 VAL ARG ASP GLU TYR VAL PRO GLY HIS ILE ARG MET PRO SEQRES 12 B 212 ALA TYR CYS ARG GLY ARG VAL GLY THR ILE SER HIS ARG SEQRES 13 B 212 THR THR GLU LYS TRP PRO PHE PRO ASP ALA ILE GLY HIS SEQRES 14 B 212 GLY ARG ASN ASP ALA GLY GLU GLU PRO THR TYR HIS VAL SEQRES 15 B 212 LYS PHE ALA ALA GLU GLU LEU PHE GLY SER ASP THR ASP SEQRES 16 B 212 GLY GLY SER VAL VAL VAL ASP LEU PHE GLU GLY TYR LEU SEQRES 17 B 212 GLU PRO ALA ALA MODRES 2ZCF CSD A 112 CYS 3-SULFINOALANINE MODRES 2ZCF CSO A 114 CYS S-HYDROXYCYSTEINE HET CSD A 112 8 HET CSO A 114 7 HET FE A 206 1 HET MG B 213 1 HETNAM CSD 3-SULFINOALANINE HETNAM CSO S-HYDROXYCYSTEINE HETNAM FE FE (III) ION HETNAM MG MAGNESIUM ION HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE FORMUL 1 CSD C3 H7 N O4 S FORMUL 1 CSO C3 H7 N O3 S FORMUL 3 FE FE 3+ FORMUL 4 MG MG 2+ FORMUL 5 HOH *655(H2 O) HELIX 1 1 PRO A 17 GLY A 31 1 15 HELIX 2 2 GLY A 38 ASP A 50 1 13 HELIX 3 3 SER A 52 ASP A 66 1 15 HELIX 4 4 ASP A 66 ASP A 76 1 11 HELIX 5 5 ASP A 76 TYR A 84 1 9 HELIX 6 6 ALA A 116 GLY A 121 1 6 HELIX 7 7 PRO A 124 LYS A 128 5 5 HELIX 8 8 SER A 129 VAL A 136 1 8 HELIX 9 9 GLU A 139 GLY A 148 1 10 HELIX 10 10 SER A 182 VAL A 190 1 9 HELIX 11 11 THR A 191 GLY A 197 1 7 HELIX 12 12 HIS B 34 GLU B 46 1 13 HELIX 13 13 SER B 51 ARG B 61 1 11 HELIX 14 14 GLU B 63 THR B 70 1 8 HELIX 15 15 PRO B 71 LYS B 87 1 17 HELIX 16 16 THR B 91 GLY B 100 1 10 HELIX 17 17 PRO B 143 ARG B 147 5 5 HELIX 18 18 PHE B 163 GLY B 168 1 6 HELIX 19 19 ALA B 186 GLY B 191 1 6 SHEET 1 A 2 ILE A 94 GLU A 98 0 SHEET 2 A 2 ARG A 167 LEU A 171 1 O LEU A 171 N VAL A 97 SHEET 1 B 7 LEU A 103 VAL A 108 0 SHEET 2 B 7 GLU A 156 ASP A 161 1 O TYR A 160 N VAL A 106 SHEET 3 B 7 SER B 198 PHE B 204 1 O VAL B 200 N VAL A 159 SHEET 4 B 7 THR B 179 ALA B 185 -1 N VAL B 182 O VAL B 201 SHEET 5 B 7 VAL B 150 ARG B 156 -1 N SER B 154 O HIS B 181 SHEET 6 B 7 ARG B 128 VAL B 131 -1 N VAL B 129 O GLY B 151 SHEET 7 B 7 LEU B 208 PRO B 210 -1 O GLU B 209 N ARG B 130 LINK C LEU A 111 N CSD A 112 1555 1555 1.35 LINK C CSD A 112 N SER A 113 1555 1555 1.33 LINK C SER A 113 N CSO A 114 1555 1555 1.33 LINK C CSO A 114 N THR A 115 1555 1555 1.32 LINK SG CYS A 109 FE FE A 206 1555 1555 2.32 LINK SG CSD A 112 FE FE A 206 1555 1555 2.18 LINK N SER A 113 FE FE A 206 1555 1555 2.03 LINK N CSO A 114 FE FE A 206 1555 1555 2.02 LINK SG CSO A 114 FE FE A 206 1555 1555 2.27 LINK FE FE A 206 O HOH A 207 1555 1555 1.96 LINK MG MG B 213 O HOH B 478 1555 1555 2.08 LINK MG MG B 213 O HOH B 479 1555 1555 2.06 LINK MG MG B 213 O HOH B 480 1555 1555 2.11 LINK MG MG B 213 O HOH B 481 1555 1555 2.10 LINK MG MG B 213 O HOH B 482 1555 1555 2.37 LINK MG MG B 213 O HOH B 483 1555 1555 2.10 LINK MG MG B 213 O HOH B 484 1555 1555 1.99 SITE 1 AC1 5 CYS A 109 CSD A 112 SER A 113 CSO A 114 SITE 2 AC1 5 HOH A 207 SITE 1 AC2 7 HOH B 478 HOH B 479 HOH B 480 HOH B 481 SITE 2 AC2 7 HOH B 482 HOH B 483 HOH B 484 CRYST1 114.838 60.554 82.187 90.00 125.05 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008708 0.000000 0.006109 0.00000 SCALE2 0.000000 0.016514 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014863 0.00000