data_2ZDQ # _entry.id 2ZDQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2ZDQ pdb_00002zdq 10.2210/pdb2zdq/pdb RCSB RCSB027842 ? ? WWPDB D_1000027842 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2YZG 'Free form of Ligase' unspecified PDB 2YZM 'Cocrystal with ligand' unspecified TargetDB ttk003001114.6 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2ZDQ _pdbx_database_status.recvd_initial_deposition_date 2007-11-27 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kitamuta, Y.' 1 'Yokoyama, S.' 2 'Kuramitsu, S.' 3 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 4 # _citation.id primary _citation.title 'Crystal structure of D-Alanine:D-Alanine Ligase with ATP and D-Alanine:D-Alanine from Thermus thermophius HB8' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kitamura, Y.' 1 ? primary 'Yokoyama, S.' 2 ? primary 'Kuramitsu, S.' 3 ? # _cell.entry_id 2ZDQ _cell.length_a 95.052 _cell.length_b 95.052 _cell.length_c 192.009 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2ZDQ _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'D-alanine--D-alanine ligase' 34699.812 2 6.3.2.4 ? ? ? 2 non-polymer syn D-ALANINE 89.093 4 ? ? ? ? 3 non-polymer syn "ADENOSINE-5'-TRIPHOSPHATE" 507.181 2 ? ? ? ? 4 water nat water 18.015 194 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MRVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAVIAQDGRWLLGEKALTALEAKAAPEGEHPFPPPLSWERYDVVFPL LHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKRVLAQAGVPVVPWVAVRKGEPPVVPFDPPFFVKPANTGSS VGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFGEASPVGEVRYEAPFYDYETKYTPGRAELLIPA PLDPGTQETVQELALKAYKVLGVRGMARVDFFLAEGELYLNELNTIPGFTPTSMYPRLFEAGGVAYPELLRRLVELALT ; _entity_poly.pdbx_seq_one_letter_code_can ;MRVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAVIAQDGRWLLGEKALTALEAKAAPEGEHPFPPPLSWERYDVVFPL LHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKRVLAQAGVPVVPWVAVRKGEPPVVPFDPPFFVKPANTGSS VGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFGEASPVGEVRYEAPFYDYETKYTPGRAELLIPA PLDPGTQETVQELALKAYKVLGVRGMARVDFFLAEGELYLNELNTIPGFTPTSMYPRLFEAGGVAYPELLRRLVELALT ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ttk003001114.6 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 VAL n 1 4 LEU n 1 5 LEU n 1 6 ILE n 1 7 ALA n 1 8 GLY n 1 9 GLY n 1 10 VAL n 1 11 SER n 1 12 PRO n 1 13 GLU n 1 14 HIS n 1 15 GLU n 1 16 VAL n 1 17 SER n 1 18 LEU n 1 19 LEU n 1 20 SER n 1 21 ALA n 1 22 GLU n 1 23 GLY n 1 24 VAL n 1 25 LEU n 1 26 ARG n 1 27 HIS n 1 28 ILE n 1 29 PRO n 1 30 PHE n 1 31 PRO n 1 32 THR n 1 33 ASP n 1 34 LEU n 1 35 ALA n 1 36 VAL n 1 37 ILE n 1 38 ALA n 1 39 GLN n 1 40 ASP n 1 41 GLY n 1 42 ARG n 1 43 TRP n 1 44 LEU n 1 45 LEU n 1 46 GLY n 1 47 GLU n 1 48 LYS n 1 49 ALA n 1 50 LEU n 1 51 THR n 1 52 ALA n 1 53 LEU n 1 54 GLU n 1 55 ALA n 1 56 LYS n 1 57 ALA n 1 58 ALA n 1 59 PRO n 1 60 GLU n 1 61 GLY n 1 62 GLU n 1 63 HIS n 1 64 PRO n 1 65 PHE n 1 66 PRO n 1 67 PRO n 1 68 PRO n 1 69 LEU n 1 70 SER n 1 71 TRP n 1 72 GLU n 1 73 ARG n 1 74 TYR n 1 75 ASP n 1 76 VAL n 1 77 VAL n 1 78 PHE n 1 79 PRO n 1 80 LEU n 1 81 LEU n 1 82 HIS n 1 83 GLY n 1 84 ARG n 1 85 PHE n 1 86 GLY n 1 87 GLU n 1 88 ASP n 1 89 GLY n 1 90 THR n 1 91 VAL n 1 92 GLN n 1 93 GLY n 1 94 PHE n 1 95 LEU n 1 96 GLU n 1 97 LEU n 1 98 LEU n 1 99 GLY n 1 100 LYS n 1 101 PRO n 1 102 TYR n 1 103 VAL n 1 104 GLY n 1 105 ALA n 1 106 GLY n 1 107 VAL n 1 108 ALA n 1 109 ALA n 1 110 SER n 1 111 ALA n 1 112 LEU n 1 113 CYS n 1 114 MET n 1 115 ASP n 1 116 LYS n 1 117 ASP n 1 118 LEU n 1 119 SER n 1 120 LYS n 1 121 ARG n 1 122 VAL n 1 123 LEU n 1 124 ALA n 1 125 GLN n 1 126 ALA n 1 127 GLY n 1 128 VAL n 1 129 PRO n 1 130 VAL n 1 131 VAL n 1 132 PRO n 1 133 TRP n 1 134 VAL n 1 135 ALA n 1 136 VAL n 1 137 ARG n 1 138 LYS n 1 139 GLY n 1 140 GLU n 1 141 PRO n 1 142 PRO n 1 143 VAL n 1 144 VAL n 1 145 PRO n 1 146 PHE n 1 147 ASP n 1 148 PRO n 1 149 PRO n 1 150 PHE n 1 151 PHE n 1 152 VAL n 1 153 LYS n 1 154 PRO n 1 155 ALA n 1 156 ASN n 1 157 THR n 1 158 GLY n 1 159 SER n 1 160 SER n 1 161 VAL n 1 162 GLY n 1 163 ILE n 1 164 SER n 1 165 ARG n 1 166 VAL n 1 167 GLU n 1 168 ARG n 1 169 PHE n 1 170 GLN n 1 171 ASP n 1 172 LEU n 1 173 GLU n 1 174 ALA n 1 175 ALA n 1 176 LEU n 1 177 ALA n 1 178 LEU n 1 179 ALA n 1 180 PHE n 1 181 ARG n 1 182 TYR n 1 183 ASP n 1 184 GLU n 1 185 LYS n 1 186 ALA n 1 187 VAL n 1 188 VAL n 1 189 GLU n 1 190 LYS n 1 191 ALA n 1 192 LEU n 1 193 SER n 1 194 PRO n 1 195 VAL n 1 196 ARG n 1 197 GLU n 1 198 LEU n 1 199 GLU n 1 200 VAL n 1 201 GLY n 1 202 VAL n 1 203 LEU n 1 204 GLY n 1 205 ASN n 1 206 VAL n 1 207 PHE n 1 208 GLY n 1 209 GLU n 1 210 ALA n 1 211 SER n 1 212 PRO n 1 213 VAL n 1 214 GLY n 1 215 GLU n 1 216 VAL n 1 217 ARG n 1 218 TYR n 1 219 GLU n 1 220 ALA n 1 221 PRO n 1 222 PHE n 1 223 TYR n 1 224 ASP n 1 225 TYR n 1 226 GLU n 1 227 THR n 1 228 LYS n 1 229 TYR n 1 230 THR n 1 231 PRO n 1 232 GLY n 1 233 ARG n 1 234 ALA n 1 235 GLU n 1 236 LEU n 1 237 LEU n 1 238 ILE n 1 239 PRO n 1 240 ALA n 1 241 PRO n 1 242 LEU n 1 243 ASP n 1 244 PRO n 1 245 GLY n 1 246 THR n 1 247 GLN n 1 248 GLU n 1 249 THR n 1 250 VAL n 1 251 GLN n 1 252 GLU n 1 253 LEU n 1 254 ALA n 1 255 LEU n 1 256 LYS n 1 257 ALA n 1 258 TYR n 1 259 LYS n 1 260 VAL n 1 261 LEU n 1 262 GLY n 1 263 VAL n 1 264 ARG n 1 265 GLY n 1 266 MET n 1 267 ALA n 1 268 ARG n 1 269 VAL n 1 270 ASP n 1 271 PHE n 1 272 PHE n 1 273 LEU n 1 274 ALA n 1 275 GLU n 1 276 GLY n 1 277 GLU n 1 278 LEU n 1 279 TYR n 1 280 LEU n 1 281 ASN n 1 282 GLU n 1 283 LEU n 1 284 ASN n 1 285 THR n 1 286 ILE n 1 287 PRO n 1 288 GLY n 1 289 PHE n 1 290 THR n 1 291 PRO n 1 292 THR n 1 293 SER n 1 294 MET n 1 295 TYR n 1 296 PRO n 1 297 ARG n 1 298 LEU n 1 299 PHE n 1 300 GLU n 1 301 ALA n 1 302 GLY n 1 303 GLY n 1 304 VAL n 1 305 ALA n 1 306 TYR n 1 307 PRO n 1 308 GLU n 1 309 LEU n 1 310 LEU n 1 311 ARG n 1 312 ARG n 1 313 LEU n 1 314 VAL n 1 315 GLU n 1 316 LEU n 1 317 ALA n 1 318 LEU n 1 319 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain HB8 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermus thermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-11a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5SHZ3_THET8 _struct_ref.pdbx_db_accession Q5SHZ3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAVIAQDGRWLLGEKALTALEAKAAPEGEHPFPPPLSWERYDVVFPL LHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKRVLAQAGVPVVPWVAVRKGEPPVVPFDPPFFVKPANTGSS VGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGNVFGEASPVGEVRYEAPFYDYETKYTPGRAELLIPA PLDPGTQETVQELALKAYKVLGVRGMARVDFFLAEGELYLNELNTIPGFTPTSMYPRLFEAGGVAYPELLRRLVELALT ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2ZDQ A 1 ? 319 ? Q5SHZ3 1 ? 319 ? 1 319 2 1 2ZDQ B 1 ? 319 ? Q5SHZ3 1 ? 319 ? 1 319 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 ATP non-polymer . "ADENOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O13 P3' 507.181 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DAL 'D-peptide linking' . D-ALANINE ? 'C3 H7 N O2' 89.093 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2ZDQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.12 _exptl_crystal.density_percent_sol 60.63 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.9 _exptl_crystal_grow.pdbx_details '0.91M K2 H Phosphate, 0.49M Na H2 Phosphate, 20% Glycerol, pH 6.9, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2007-09-29 _diffrn_detector.details 'A fixed exit Si double crystal monochromator followed by a two dimensional focusing mirror which is coated in rhodium.' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Fixed exit Si double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL26B2' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL26B2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 2ZDQ _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.30 _reflns.number_obs 39771 _reflns.number_all 39948 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.087 _reflns.pdbx_Rsym_value 0.070 _reflns.pdbx_netI_over_sigmaI 34.8 _reflns.B_iso_Wilson_estimate 31.8 _reflns.pdbx_redundancy 17.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_all 96.2 _reflns_shell.Rmerge_I_obs 0.388 _reflns_shell.pdbx_Rsym_value 0.326 _reflns_shell.meanI_over_sigI_obs 3.65 _reflns_shell.pdbx_redundancy 8.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3776 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2ZDQ _refine.ls_number_reflns_obs 37945 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 68875.54 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 48.00 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 94.9 _refine.ls_R_factor_obs 0.231 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.231 _refine.ls_R_factor_R_free 0.266 _refine.ls_R_factor_R_free_error 0.004 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.1 _refine.ls_number_reflns_R_free 3828 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 41.2 _refine.aniso_B[1][1] 7.17 _refine.aniso_B[2][2] 7.17 _refine.aniso_B[3][3] -14.34 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.331428 _refine.solvent_model_param_bsol 12.1816 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 2ZDG _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2ZDQ _refine_analyze.Luzzati_coordinate_error_obs 0.32 _refine_analyze.Luzzati_sigma_a_obs 0.34 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.37 _refine_analyze.Luzzati_sigma_a_free 0.37 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4906 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 84 _refine_hist.number_atoms_solvent 194 _refine_hist.number_atoms_total 5184 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 48.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 2.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 26.1 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 3.70 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.30 _refine_ls_shell.d_res_low 2.44 _refine_ls_shell.number_reflns_R_work 5025 _refine_ls_shell.R_factor_R_work 0.335 _refine_ls_shell.percent_reflns_obs 85.5 _refine_ls_shell.R_factor_R_free 0.360 _refine_ls_shell.R_factor_R_free_error 0.015 _refine_ls_shell.percent_reflns_R_free 10.3 _refine_ls_shell.number_reflns_R_free 579 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein2.param protein2.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' 3 atp_xplor.param atp_xplor.top 'X-RAY DIFFRACTION' # _struct.entry_id 2ZDQ _struct.title 'Crystal structure of D-Alanine:D-Alanine Ligase with ATP and D-Alanine:D-Alanine from Thermus thermophius HB8' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2ZDQ _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text ;D-Alanine-D-Alanine Ligase, Peptidoglycan Biosynthesis, Cell shape, Cell wall biogenesis/degradation, Peptidoglycan synthesis, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Ligase ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 2 ? G N N 2 ? H N N 3 ? I N N 4 ? J N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 13 ? ILE A 28 ? GLU A 13 ILE A 28 1 ? 16 HELX_P HELX_P2 2 GLY A 46 ? ALA A 55 ? GLY A 46 ALA A 55 1 ? 10 HELX_P HELX_P3 3 SER A 70 ? TYR A 74 ? SER A 70 TYR A 74 5 ? 5 HELX_P HELX_P4 4 GLY A 89 ? GLY A 99 ? GLY A 89 GLY A 99 1 ? 11 HELX_P HELX_P5 5 GLY A 106 ? ASP A 115 ? GLY A 106 ASP A 115 1 ? 10 HELX_P HELX_P6 6 ASP A 115 ? ALA A 126 ? ASP A 115 ALA A 126 1 ? 12 HELX_P HELX_P7 7 ARG A 168 ? GLN A 170 ? ARG A 168 GLN A 170 5 ? 3 HELX_P HELX_P8 8 ASP A 171 ? PHE A 180 ? ASP A 171 PHE A 180 1 ? 10 HELX_P HELX_P9 9 ASP A 224 ? THR A 230 ? ASP A 224 THR A 230 1 ? 7 HELX_P HELX_P10 10 ASP A 243 ? GLY A 262 ? ASP A 243 GLY A 262 1 ? 20 HELX_P HELX_P11 11 MET A 294 ? ALA A 301 ? MET A 294 ALA A 301 1 ? 8 HELX_P HELX_P12 12 ALA A 305 ? LEU A 318 ? ALA A 305 LEU A 318 1 ? 14 HELX_P HELX_P13 13 GLU B 13 ? ILE B 28 ? GLU B 13 ILE B 28 1 ? 16 HELX_P HELX_P14 14 GLY B 46 ? ALA B 55 ? GLY B 46 ALA B 55 1 ? 10 HELX_P HELX_P15 15 SER B 70 ? TYR B 74 ? SER B 70 TYR B 74 5 ? 5 HELX_P HELX_P16 16 GLY B 89 ? GLY B 99 ? GLY B 89 GLY B 99 1 ? 11 HELX_P HELX_P17 17 GLY B 106 ? MET B 114 ? GLY B 106 MET B 114 1 ? 9 HELX_P HELX_P18 18 ASP B 115 ? ALA B 126 ? ASP B 115 ALA B 126 1 ? 12 HELX_P HELX_P19 19 ARG B 168 ? GLN B 170 ? ARG B 168 GLN B 170 5 ? 3 HELX_P HELX_P20 20 ASP B 171 ? PHE B 180 ? ASP B 171 PHE B 180 1 ? 10 HELX_P HELX_P21 21 ASP B 224 ? THR B 230 ? ASP B 224 THR B 230 1 ? 7 HELX_P HELX_P22 22 ASP B 243 ? LEU B 261 ? ASP B 243 LEU B 261 1 ? 19 HELX_P HELX_P23 23 SER B 293 ? ALA B 301 ? SER B 293 ALA B 301 1 ? 9 HELX_P HELX_P24 24 ALA B 305 ? LEU B 318 ? ALA B 305 LEU B 318 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C DAL . C ? ? ? 1_555 D DAL . N ? ? A DAL 401 A DAL 402 1_555 ? ? ? ? ? ? ? 1.463 ? ? covale2 covale both ? F DAL . C ? ? ? 1_555 G DAL . N ? ? B DAL 403 B DAL 404 1_555 ? ? ? ? ? ? ? 1.236 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PHE 65 A . ? PHE 65 A PRO 66 A ? PRO 66 A 1 -0.40 2 PRO 148 A . ? PRO 148 A PRO 149 A ? PRO 149 A 1 -0.05 3 SER 193 A . ? SER 193 A PRO 194 A ? PRO 194 A 1 -0.37 4 ILE 238 A . ? ILE 238 A PRO 239 A ? PRO 239 A 1 -0.15 5 PHE 65 B . ? PHE 65 B PRO 66 B ? PRO 66 B 1 -0.24 6 PRO 148 B . ? PRO 148 B PRO 149 B ? PRO 149 B 1 -0.05 7 SER 193 B . ? SER 193 B PRO 194 B ? PRO 194 B 1 -0.26 8 ILE 238 B . ? ILE 238 B PRO 239 B ? PRO 239 B 1 -0.11 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? G ? 4 ? H ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? parallel E 3 4 ? parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel H 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TRP A 43 ? LEU A 44 ? TRP A 43 LEU A 44 A 2 THR A 32 ? ILE A 37 ? THR A 32 ILE A 37 A 3 VAL A 3 ? GLY A 8 ? VAL A 3 GLY A 8 A 4 VAL A 76 ? PRO A 79 ? VAL A 76 PRO A 79 B 1 TRP A 133 ? ARG A 137 ? TRP A 133 ARG A 137 B 2 LYS A 185 ? LYS A 190 ? LYS A 185 LYS A 190 B 3 PHE A 150 ? PRO A 154 ? PHE A 150 PRO A 154 B 4 SER A 164 ? VAL A 166 ? SER A 164 VAL A 166 C 1 GLU A 209 ? ALA A 210 ? GLU A 209 ALA A 210 C 2 ARG A 196 ? LEU A 203 ? ARG A 196 LEU A 203 C 3 GLY A 214 ? ARG A 217 ? GLY A 214 ARG A 217 C 4 GLU A 235 ? LEU A 237 ? GLU A 235 LEU A 237 D 1 GLU A 209 ? ALA A 210 ? GLU A 209 ALA A 210 D 2 ARG A 196 ? LEU A 203 ? ARG A 196 LEU A 203 D 3 MET A 266 ? ALA A 274 ? MET A 266 ALA A 274 D 4 GLU A 277 ? ASN A 284 ? GLU A 277 ASN A 284 E 1 TRP B 43 ? LEU B 44 ? TRP B 43 LEU B 44 E 2 THR B 32 ? ILE B 37 ? THR B 32 ILE B 37 E 3 VAL B 3 ? GLY B 8 ? VAL B 3 GLY B 8 E 4 VAL B 76 ? LEU B 80 ? VAL B 76 LEU B 80 F 1 TRP B 133 ? ARG B 137 ? TRP B 133 ARG B 137 F 2 LYS B 185 ? LYS B 190 ? LYS B 185 LYS B 190 F 3 PHE B 150 ? PRO B 154 ? PHE B 150 PRO B 154 F 4 SER B 164 ? VAL B 166 ? SER B 164 VAL B 166 G 1 GLU B 209 ? ALA B 210 ? GLU B 209 ALA B 210 G 2 ARG B 196 ? LEU B 203 ? ARG B 196 LEU B 203 G 3 GLY B 214 ? ARG B 217 ? GLY B 214 ARG B 217 G 4 GLU B 235 ? LEU B 237 ? GLU B 235 LEU B 237 H 1 GLU B 209 ? ALA B 210 ? GLU B 209 ALA B 210 H 2 ARG B 196 ? LEU B 203 ? ARG B 196 LEU B 203 H 3 MET B 266 ? ALA B 274 ? MET B 266 ALA B 274 H 4 GLU B 277 ? ASN B 284 ? GLU B 277 ASN B 284 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 44 ? O LEU A 44 N VAL A 36 ? N VAL A 36 A 2 3 O ASP A 33 ? O ASP A 33 N LEU A 5 ? N LEU A 5 A 3 4 N LEU A 4 ? N LEU A 4 O PHE A 78 ? O PHE A 78 B 1 2 N VAL A 136 ? N VAL A 136 O ALA A 186 ? O ALA A 186 B 2 3 O VAL A 187 ? O VAL A 187 N LYS A 153 ? N LYS A 153 B 3 4 N PHE A 150 ? N PHE A 150 O VAL A 166 ? O VAL A 166 C 1 2 O GLU A 209 ? O GLU A 209 N LEU A 203 ? N LEU A 203 C 2 3 N GLU A 199 ? N GLU A 199 O GLY A 214 ? O GLY A 214 C 3 4 N GLU A 215 ? N GLU A 215 O LEU A 237 ? O LEU A 237 D 1 2 O GLU A 209 ? O GLU A 209 N LEU A 203 ? N LEU A 203 D 2 3 N LEU A 198 ? N LEU A 198 O PHE A 271 ? O PHE A 271 D 3 4 N ASP A 270 ? N ASP A 270 O GLU A 282 ? O GLU A 282 E 1 2 O LEU B 44 ? O LEU B 44 N VAL B 36 ? N VAL B 36 E 2 3 O ASP B 33 ? O ASP B 33 N LEU B 5 ? N LEU B 5 E 3 4 N LEU B 4 ? N LEU B 4 O PHE B 78 ? O PHE B 78 F 1 2 N VAL B 136 ? N VAL B 136 O ALA B 186 ? O ALA B 186 F 2 3 O VAL B 187 ? O VAL B 187 N LYS B 153 ? N LYS B 153 F 3 4 N PHE B 150 ? N PHE B 150 O VAL B 166 ? O VAL B 166 G 1 2 O GLU B 209 ? O GLU B 209 N LEU B 203 ? N LEU B 203 G 2 3 N GLU B 199 ? N GLU B 199 O GLY B 214 ? O GLY B 214 G 3 4 N ARG B 217 ? N ARG B 217 O GLU B 235 ? O GLU B 235 H 1 2 O GLU B 209 ? O GLU B 209 N LEU B 203 ? N LEU B 203 H 2 3 N LEU B 198 ? N LEU B 198 O PHE B 271 ? O PHE B 271 H 3 4 N PHE B 272 ? N PHE B 272 O TYR B 279 ? O TYR B 279 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A DAL 401 ? 5 'BINDING SITE FOR RESIDUE DAL A 401' AC2 Software A DAL 402 ? 7 'BINDING SITE FOR RESIDUE DAL A 402' AC3 Software B DAL 403 ? 4 'BINDING SITE FOR RESIDUE DAL B 403' AC4 Software B DAL 404 ? 6 'BINDING SITE FOR RESIDUE DAL B 404' AC5 Software A ATP 1501 ? 26 'BINDING SITE FOR RESIDUE ATP A 1501' AC6 Software B ATP 1502 ? 24 'BINDING SITE FOR RESIDUE ATP B 1502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 GLU A 13 ? GLU A 13 . ? 1_555 ? 2 AC1 5 TYR A 229 ? TYR A 229 . ? 1_555 ? 3 AC1 5 ARG A 268 ? ARG A 268 . ? 1_555 ? 4 AC1 5 ASN A 284 ? ASN A 284 . ? 1_555 ? 5 AC1 5 GLY A 288 ? GLY A 288 . ? 1_555 ? 6 AC2 7 TYR A 229 ? TYR A 229 . ? 1_555 ? 7 AC2 7 ARG A 268 ? ARG A 268 . ? 1_555 ? 8 AC2 7 GLY A 288 ? GLY A 288 . ? 1_555 ? 9 AC2 7 SER A 293 ? SER A 293 . ? 1_555 ? 10 AC2 7 MET A 294 ? MET A 294 . ? 1_555 ? 11 AC2 7 HOH I . ? HOH A 1508 . ? 1_555 ? 12 AC2 7 HOH I . ? HOH A 1509 . ? 1_555 ? 13 AC3 4 GLU B 13 ? GLU B 13 . ? 1_555 ? 14 AC3 4 TYR B 229 ? TYR B 229 . ? 1_555 ? 15 AC3 4 ARG B 268 ? ARG B 268 . ? 1_555 ? 16 AC3 4 GLY B 288 ? GLY B 288 . ? 1_555 ? 17 AC4 6 LYS B 228 ? LYS B 228 . ? 1_555 ? 18 AC4 6 TYR B 229 ? TYR B 229 . ? 1_555 ? 19 AC4 6 ARG B 268 ? ARG B 268 . ? 1_555 ? 20 AC4 6 SER B 293 ? SER B 293 . ? 1_555 ? 21 AC4 6 MET B 294 ? MET B 294 . ? 1_555 ? 22 AC4 6 HOH J . ? HOH B 1546 . ? 1_555 ? 23 AC5 26 LYS A 116 ? LYS A 116 . ? 1_555 ? 24 AC5 26 PHE A 151 ? PHE A 151 . ? 1_555 ? 25 AC5 26 LYS A 153 ? LYS A 153 . ? 1_555 ? 26 AC5 26 GLY A 158 ? GLY A 158 . ? 1_555 ? 27 AC5 26 SER A 159 ? SER A 159 . ? 1_555 ? 28 AC5 26 SER A 160 ? SER A 160 . ? 1_555 ? 29 AC5 26 ILE A 163 ? ILE A 163 . ? 1_555 ? 30 AC5 26 GLU A 189 ? GLU A 189 . ? 1_555 ? 31 AC5 26 LYS A 190 ? LYS A 190 . ? 1_555 ? 32 AC5 26 ALA A 191 ? ALA A 191 . ? 1_555 ? 33 AC5 26 LEU A 192 ? LEU A 192 . ? 1_555 ? 34 AC5 26 GLU A 197 ? GLU A 197 . ? 1_555 ? 35 AC5 26 TYR A 218 ? TYR A 218 . ? 1_555 ? 36 AC5 26 PHE A 222 ? PHE A 222 . ? 1_555 ? 37 AC5 26 TYR A 223 ? TYR A 223 . ? 1_555 ? 38 AC5 26 LYS A 228 ? LYS A 228 . ? 1_555 ? 39 AC5 26 ARG A 268 ? ARG A 268 . ? 1_555 ? 40 AC5 26 ASP A 270 ? ASP A 270 . ? 1_555 ? 41 AC5 26 PHE A 272 ? PHE A 272 . ? 1_555 ? 42 AC5 26 ASN A 281 ? ASN A 281 . ? 1_555 ? 43 AC5 26 GLU A 282 ? GLU A 282 . ? 1_555 ? 44 AC5 26 ASN A 284 ? ASN A 284 . ? 1_555 ? 45 AC5 26 HOH I . ? HOH A 1502 . ? 1_555 ? 46 AC5 26 HOH I . ? HOH A 1530 . ? 1_555 ? 47 AC5 26 HOH I . ? HOH A 1536 . ? 1_555 ? 48 AC5 26 HOH I . ? HOH A 1579 . ? 1_555 ? 49 AC6 24 LYS B 116 ? LYS B 116 . ? 1_555 ? 50 AC6 24 PHE B 151 ? PHE B 151 . ? 1_555 ? 51 AC6 24 LYS B 153 ? LYS B 153 . ? 1_555 ? 52 AC6 24 GLY B 158 ? GLY B 158 . ? 1_555 ? 53 AC6 24 SER B 159 ? SER B 159 . ? 1_555 ? 54 AC6 24 SER B 160 ? SER B 160 . ? 1_555 ? 55 AC6 24 ILE B 163 ? ILE B 163 . ? 1_555 ? 56 AC6 24 GLU B 189 ? GLU B 189 . ? 1_555 ? 57 AC6 24 LYS B 190 ? LYS B 190 . ? 1_555 ? 58 AC6 24 ALA B 191 ? ALA B 191 . ? 1_555 ? 59 AC6 24 LEU B 192 ? LEU B 192 . ? 1_555 ? 60 AC6 24 GLU B 197 ? GLU B 197 . ? 1_555 ? 61 AC6 24 TYR B 218 ? TYR B 218 . ? 1_555 ? 62 AC6 24 PHE B 222 ? PHE B 222 . ? 1_555 ? 63 AC6 24 TYR B 223 ? TYR B 223 . ? 1_555 ? 64 AC6 24 LYS B 228 ? LYS B 228 . ? 1_555 ? 65 AC6 24 ARG B 268 ? ARG B 268 . ? 1_555 ? 66 AC6 24 ASP B 270 ? ASP B 270 . ? 1_555 ? 67 AC6 24 PHE B 272 ? PHE B 272 . ? 1_555 ? 68 AC6 24 ASN B 281 ? ASN B 281 . ? 1_555 ? 69 AC6 24 GLU B 282 ? GLU B 282 . ? 1_555 ? 70 AC6 24 ASN B 284 ? ASN B 284 . ? 1_555 ? 71 AC6 24 HOH J . ? HOH B 1504 . ? 1_555 ? 72 AC6 24 HOH J . ? HOH B 1547 . ? 1_555 ? # _database_PDB_matrix.entry_id 2ZDQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2ZDQ _atom_sites.fract_transf_matrix[1][1] 0.010521 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010521 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005208 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 PRO 12 12 12 PRO PRO A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 HIS 14 14 14 HIS HIS A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 HIS 27 27 27 HIS HIS A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 TRP 43 43 43 TRP TRP A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 HIS 63 63 63 HIS HIS A . n A 1 64 PRO 64 64 64 PRO PRO A . n A 1 65 PHE 65 65 65 PHE PHE A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 PRO 67 67 67 PRO PRO A . n A 1 68 PRO 68 68 68 PRO PRO A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 TRP 71 71 71 TRP TRP A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 TYR 74 74 74 TYR TYR A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 PHE 78 78 78 PHE PHE A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 HIS 82 82 82 HIS HIS A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 PHE 94 94 94 PHE PHE A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 PRO 101 101 101 PRO PRO A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 VAL 107 107 107 VAL VAL A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 CYS 113 113 113 CYS CYS A . n A 1 114 MET 114 114 114 MET MET A . n A 1 115 ASP 115 115 115 ASP ASP A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 LEU 118 118 118 LEU LEU A . n A 1 119 SER 119 119 119 SER SER A . n A 1 120 LYS 120 120 120 LYS LYS A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 VAL 122 122 122 VAL VAL A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 GLN 125 125 125 GLN GLN A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 GLY 127 127 127 GLY GLY A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 PRO 129 129 129 PRO PRO A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 PRO 132 132 132 PRO PRO A . n A 1 133 TRP 133 133 133 TRP TRP A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 GLU 140 140 140 GLU GLU A . n A 1 141 PRO 141 141 141 PRO PRO A . n A 1 142 PRO 142 142 142 PRO PRO A . n A 1 143 VAL 143 143 143 VAL VAL A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 PRO 145 145 145 PRO PRO A . n A 1 146 PHE 146 146 146 PHE PHE A . n A 1 147 ASP 147 147 147 ASP ASP A . n A 1 148 PRO 148 148 148 PRO PRO A . n A 1 149 PRO 149 149 149 PRO PRO A . n A 1 150 PHE 150 150 150 PHE PHE A . n A 1 151 PHE 151 151 151 PHE PHE A . n A 1 152 VAL 152 152 152 VAL VAL A . n A 1 153 LYS 153 153 153 LYS LYS A . n A 1 154 PRO 154 154 154 PRO PRO A . n A 1 155 ALA 155 155 155 ALA ALA A . n A 1 156 ASN 156 156 156 ASN ASN A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 GLY 158 158 158 GLY GLY A . n A 1 159 SER 159 159 159 SER SER A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 VAL 161 161 161 VAL VAL A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 ILE 163 163 163 ILE ILE A . n A 1 164 SER 164 164 164 SER SER A . n A 1 165 ARG 165 165 165 ARG ARG A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 GLU 167 167 167 GLU GLU A . n A 1 168 ARG 168 168 168 ARG ARG A . n A 1 169 PHE 169 169 169 PHE PHE A . n A 1 170 GLN 170 170 170 GLN GLN A . n A 1 171 ASP 171 171 171 ASP ASP A . n A 1 172 LEU 172 172 172 LEU LEU A . n A 1 173 GLU 173 173 173 GLU GLU A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 ALA 175 175 175 ALA ALA A . n A 1 176 LEU 176 176 176 LEU LEU A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 LEU 178 178 178 LEU LEU A . n A 1 179 ALA 179 179 179 ALA ALA A . n A 1 180 PHE 180 180 180 PHE PHE A . n A 1 181 ARG 181 181 181 ARG ARG A . n A 1 182 TYR 182 182 182 TYR TYR A . n A 1 183 ASP 183 183 183 ASP ASP A . n A 1 184 GLU 184 184 184 GLU GLU A . n A 1 185 LYS 185 185 185 LYS LYS A . n A 1 186 ALA 186 186 186 ALA ALA A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 VAL 188 188 188 VAL VAL A . n A 1 189 GLU 189 189 189 GLU GLU A . n A 1 190 LYS 190 190 190 LYS LYS A . n A 1 191 ALA 191 191 191 ALA ALA A . n A 1 192 LEU 192 192 192 LEU LEU A . n A 1 193 SER 193 193 193 SER SER A . n A 1 194 PRO 194 194 194 PRO PRO A . n A 1 195 VAL 195 195 195 VAL VAL A . n A 1 196 ARG 196 196 196 ARG ARG A . n A 1 197 GLU 197 197 197 GLU GLU A . n A 1 198 LEU 198 198 198 LEU LEU A . n A 1 199 GLU 199 199 199 GLU GLU A . n A 1 200 VAL 200 200 200 VAL VAL A . n A 1 201 GLY 201 201 201 GLY GLY A . n A 1 202 VAL 202 202 202 VAL VAL A . n A 1 203 LEU 203 203 203 LEU LEU A . n A 1 204 GLY 204 204 204 GLY GLY A . n A 1 205 ASN 205 205 205 ASN ASN A . n A 1 206 VAL 206 206 206 VAL VAL A . n A 1 207 PHE 207 207 207 PHE PHE A . n A 1 208 GLY 208 208 208 GLY GLY A . n A 1 209 GLU 209 209 209 GLU GLU A . n A 1 210 ALA 210 210 210 ALA ALA A . n A 1 211 SER 211 211 211 SER SER A . n A 1 212 PRO 212 212 212 PRO PRO A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 GLY 214 214 214 GLY GLY A . n A 1 215 GLU 215 215 215 GLU GLU A . n A 1 216 VAL 216 216 216 VAL VAL A . n A 1 217 ARG 217 217 217 ARG ARG A . n A 1 218 TYR 218 218 218 TYR TYR A . n A 1 219 GLU 219 219 219 GLU GLU A . n A 1 220 ALA 220 220 220 ALA ALA A . n A 1 221 PRO 221 221 221 PRO PRO A . n A 1 222 PHE 222 222 222 PHE PHE A . n A 1 223 TYR 223 223 223 TYR TYR A . n A 1 224 ASP 224 224 224 ASP ASP A . n A 1 225 TYR 225 225 225 TYR TYR A . n A 1 226 GLU 226 226 226 GLU GLU A . n A 1 227 THR 227 227 227 THR THR A . n A 1 228 LYS 228 228 228 LYS LYS A . n A 1 229 TYR 229 229 229 TYR TYR A . n A 1 230 THR 230 230 230 THR THR A . n A 1 231 PRO 231 231 231 PRO PRO A . n A 1 232 GLY 232 232 232 GLY GLY A . n A 1 233 ARG 233 233 233 ARG ARG A . n A 1 234 ALA 234 234 234 ALA ALA A . n A 1 235 GLU 235 235 235 GLU GLU A . n A 1 236 LEU 236 236 236 LEU LEU A . n A 1 237 LEU 237 237 237 LEU LEU A . n A 1 238 ILE 238 238 238 ILE ILE A . n A 1 239 PRO 239 239 239 PRO PRO A . n A 1 240 ALA 240 240 240 ALA ALA A . n A 1 241 PRO 241 241 241 PRO PRO A . n A 1 242 LEU 242 242 242 LEU LEU A . n A 1 243 ASP 243 243 243 ASP ASP A . n A 1 244 PRO 244 244 244 PRO PRO A . n A 1 245 GLY 245 245 245 GLY GLY A . n A 1 246 THR 246 246 246 THR THR A . n A 1 247 GLN 247 247 247 GLN GLN A . n A 1 248 GLU 248 248 248 GLU GLU A . n A 1 249 THR 249 249 249 THR THR A . n A 1 250 VAL 250 250 250 VAL VAL A . n A 1 251 GLN 251 251 251 GLN GLN A . n A 1 252 GLU 252 252 252 GLU GLU A . n A 1 253 LEU 253 253 253 LEU LEU A . n A 1 254 ALA 254 254 254 ALA ALA A . n A 1 255 LEU 255 255 255 LEU LEU A . n A 1 256 LYS 256 256 256 LYS LYS A . n A 1 257 ALA 257 257 257 ALA ALA A . n A 1 258 TYR 258 258 258 TYR TYR A . n A 1 259 LYS 259 259 259 LYS LYS A . n A 1 260 VAL 260 260 260 VAL VAL A . n A 1 261 LEU 261 261 261 LEU LEU A . n A 1 262 GLY 262 262 262 GLY GLY A . n A 1 263 VAL 263 263 263 VAL VAL A . n A 1 264 ARG 264 264 264 ARG ARG A . n A 1 265 GLY 265 265 265 GLY GLY A . n A 1 266 MET 266 266 266 MET MET A . n A 1 267 ALA 267 267 267 ALA ALA A . n A 1 268 ARG 268 268 268 ARG ARG A . n A 1 269 VAL 269 269 269 VAL VAL A . n A 1 270 ASP 270 270 270 ASP ASP A . n A 1 271 PHE 271 271 271 PHE PHE A . n A 1 272 PHE 272 272 272 PHE PHE A . n A 1 273 LEU 273 273 273 LEU LEU A . n A 1 274 ALA 274 274 274 ALA ALA A . n A 1 275 GLU 275 275 275 GLU GLU A . n A 1 276 GLY 276 276 276 GLY GLY A . n A 1 277 GLU 277 277 277 GLU GLU A . n A 1 278 LEU 278 278 278 LEU LEU A . n A 1 279 TYR 279 279 279 TYR TYR A . n A 1 280 LEU 280 280 280 LEU LEU A . n A 1 281 ASN 281 281 281 ASN ASN A . n A 1 282 GLU 282 282 282 GLU GLU A . n A 1 283 LEU 283 283 283 LEU LEU A . n A 1 284 ASN 284 284 284 ASN ASN A . n A 1 285 THR 285 285 285 THR THR A . n A 1 286 ILE 286 286 286 ILE ILE A . n A 1 287 PRO 287 287 287 PRO PRO A . n A 1 288 GLY 288 288 288 GLY GLY A . n A 1 289 PHE 289 289 289 PHE PHE A . n A 1 290 THR 290 290 290 THR THR A . n A 1 291 PRO 291 291 291 PRO PRO A . n A 1 292 THR 292 292 292 THR THR A . n A 1 293 SER 293 293 293 SER SER A . n A 1 294 MET 294 294 294 MET MET A . n A 1 295 TYR 295 295 295 TYR TYR A . n A 1 296 PRO 296 296 296 PRO PRO A . n A 1 297 ARG 297 297 297 ARG ARG A . n A 1 298 LEU 298 298 298 LEU LEU A . n A 1 299 PHE 299 299 299 PHE PHE A . n A 1 300 GLU 300 300 300 GLU GLU A . n A 1 301 ALA 301 301 301 ALA ALA A . n A 1 302 GLY 302 302 302 GLY GLY A . n A 1 303 GLY 303 303 303 GLY GLY A . n A 1 304 VAL 304 304 304 VAL VAL A . n A 1 305 ALA 305 305 305 ALA ALA A . n A 1 306 TYR 306 306 306 TYR TYR A . n A 1 307 PRO 307 307 307 PRO PRO A . n A 1 308 GLU 308 308 308 GLU GLU A . n A 1 309 LEU 309 309 309 LEU LEU A . n A 1 310 LEU 310 310 310 LEU LEU A . n A 1 311 ARG 311 311 311 ARG ARG A . n A 1 312 ARG 312 312 312 ARG ARG A . n A 1 313 LEU 313 313 313 LEU LEU A . n A 1 314 VAL 314 314 314 VAL VAL A . n A 1 315 GLU 315 315 315 GLU GLU A . n A 1 316 LEU 316 316 316 LEU LEU A . n A 1 317 ALA 317 317 317 ALA ALA A . n A 1 318 LEU 318 318 318 LEU LEU A . n A 1 319 THR 319 319 319 THR THR A . n B 1 1 MET 1 1 1 MET MET B . n B 1 2 ARG 2 2 2 ARG ARG B . n B 1 3 VAL 3 3 3 VAL VAL B . n B 1 4 LEU 4 4 4 LEU LEU B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 ILE 6 6 6 ILE ILE B . n B 1 7 ALA 7 7 7 ALA ALA B . n B 1 8 GLY 8 8 8 GLY GLY B . n B 1 9 GLY 9 9 9 GLY GLY B . n B 1 10 VAL 10 10 10 VAL VAL B . n B 1 11 SER 11 11 11 SER SER B . n B 1 12 PRO 12 12 12 PRO PRO B . n B 1 13 GLU 13 13 13 GLU GLU B . n B 1 14 HIS 14 14 14 HIS HIS B . n B 1 15 GLU 15 15 15 GLU GLU B . n B 1 16 VAL 16 16 16 VAL VAL B . n B 1 17 SER 17 17 17 SER SER B . n B 1 18 LEU 18 18 18 LEU LEU B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 SER 20 20 20 SER SER B . n B 1 21 ALA 21 21 21 ALA ALA B . n B 1 22 GLU 22 22 22 GLU GLU B . n B 1 23 GLY 23 23 23 GLY GLY B . n B 1 24 VAL 24 24 24 VAL VAL B . n B 1 25 LEU 25 25 25 LEU LEU B . n B 1 26 ARG 26 26 26 ARG ARG B . n B 1 27 HIS 27 27 27 HIS HIS B . n B 1 28 ILE 28 28 28 ILE ILE B . n B 1 29 PRO 29 29 29 PRO PRO B . n B 1 30 PHE 30 30 30 PHE PHE B . n B 1 31 PRO 31 31 31 PRO PRO B . n B 1 32 THR 32 32 32 THR THR B . n B 1 33 ASP 33 33 33 ASP ASP B . n B 1 34 LEU 34 34 34 LEU LEU B . n B 1 35 ALA 35 35 35 ALA ALA B . n B 1 36 VAL 36 36 36 VAL VAL B . n B 1 37 ILE 37 37 37 ILE ILE B . n B 1 38 ALA 38 38 38 ALA ALA B . n B 1 39 GLN 39 39 39 GLN GLN B . n B 1 40 ASP 40 40 40 ASP ASP B . n B 1 41 GLY 41 41 41 GLY GLY B . n B 1 42 ARG 42 42 42 ARG ARG B . n B 1 43 TRP 43 43 43 TRP TRP B . n B 1 44 LEU 44 44 44 LEU LEU B . n B 1 45 LEU 45 45 45 LEU LEU B . n B 1 46 GLY 46 46 46 GLY GLY B . n B 1 47 GLU 47 47 47 GLU GLU B . n B 1 48 LYS 48 48 48 LYS LYS B . n B 1 49 ALA 49 49 49 ALA ALA B . n B 1 50 LEU 50 50 50 LEU LEU B . n B 1 51 THR 51 51 51 THR THR B . n B 1 52 ALA 52 52 52 ALA ALA B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 GLU 54 54 54 GLU GLU B . n B 1 55 ALA 55 55 55 ALA ALA B . n B 1 56 LYS 56 56 56 LYS LYS B . n B 1 57 ALA 57 57 57 ALA ALA B . n B 1 58 ALA 58 58 58 ALA ALA B . n B 1 59 PRO 59 59 59 PRO PRO B . n B 1 60 GLU 60 60 60 GLU GLU B . n B 1 61 GLY 61 61 61 GLY GLY B . n B 1 62 GLU 62 62 62 GLU GLU B . n B 1 63 HIS 63 63 63 HIS HIS B . n B 1 64 PRO 64 64 64 PRO PRO B . n B 1 65 PHE 65 65 65 PHE PHE B . n B 1 66 PRO 66 66 66 PRO PRO B . n B 1 67 PRO 67 67 67 PRO PRO B . n B 1 68 PRO 68 68 68 PRO PRO B . n B 1 69 LEU 69 69 69 LEU LEU B . n B 1 70 SER 70 70 70 SER SER B . n B 1 71 TRP 71 71 71 TRP TRP B . n B 1 72 GLU 72 72 72 GLU GLU B . n B 1 73 ARG 73 73 73 ARG ARG B . n B 1 74 TYR 74 74 74 TYR TYR B . n B 1 75 ASP 75 75 75 ASP ASP B . n B 1 76 VAL 76 76 76 VAL VAL B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 PHE 78 78 78 PHE PHE B . n B 1 79 PRO 79 79 79 PRO PRO B . n B 1 80 LEU 80 80 80 LEU LEU B . n B 1 81 LEU 81 81 81 LEU LEU B . n B 1 82 HIS 82 82 82 HIS HIS B . n B 1 83 GLY 83 83 83 GLY GLY B . n B 1 84 ARG 84 84 84 ARG ARG B . n B 1 85 PHE 85 85 85 PHE PHE B . n B 1 86 GLY 86 86 86 GLY GLY B . n B 1 87 GLU 87 87 87 GLU GLU B . n B 1 88 ASP 88 88 88 ASP ASP B . n B 1 89 GLY 89 89 89 GLY GLY B . n B 1 90 THR 90 90 90 THR THR B . n B 1 91 VAL 91 91 91 VAL VAL B . n B 1 92 GLN 92 92 92 GLN GLN B . n B 1 93 GLY 93 93 93 GLY GLY B . n B 1 94 PHE 94 94 94 PHE PHE B . n B 1 95 LEU 95 95 95 LEU LEU B . n B 1 96 GLU 96 96 96 GLU GLU B . n B 1 97 LEU 97 97 97 LEU LEU B . n B 1 98 LEU 98 98 98 LEU LEU B . n B 1 99 GLY 99 99 99 GLY GLY B . n B 1 100 LYS 100 100 100 LYS LYS B . n B 1 101 PRO 101 101 101 PRO PRO B . n B 1 102 TYR 102 102 102 TYR TYR B . n B 1 103 VAL 103 103 103 VAL VAL B . n B 1 104 GLY 104 104 104 GLY GLY B . n B 1 105 ALA 105 105 105 ALA ALA B . n B 1 106 GLY 106 106 106 GLY GLY B . n B 1 107 VAL 107 107 107 VAL VAL B . n B 1 108 ALA 108 108 108 ALA ALA B . n B 1 109 ALA 109 109 109 ALA ALA B . n B 1 110 SER 110 110 110 SER SER B . n B 1 111 ALA 111 111 111 ALA ALA B . n B 1 112 LEU 112 112 112 LEU LEU B . n B 1 113 CYS 113 113 113 CYS CYS B . n B 1 114 MET 114 114 114 MET MET B . n B 1 115 ASP 115 115 115 ASP ASP B . n B 1 116 LYS 116 116 116 LYS LYS B . n B 1 117 ASP 117 117 117 ASP ASP B . n B 1 118 LEU 118 118 118 LEU LEU B . n B 1 119 SER 119 119 119 SER SER B . n B 1 120 LYS 120 120 120 LYS LYS B . n B 1 121 ARG 121 121 121 ARG ARG B . n B 1 122 VAL 122 122 122 VAL VAL B . n B 1 123 LEU 123 123 123 LEU LEU B . n B 1 124 ALA 124 124 124 ALA ALA B . n B 1 125 GLN 125 125 125 GLN GLN B . n B 1 126 ALA 126 126 126 ALA ALA B . n B 1 127 GLY 127 127 127 GLY GLY B . n B 1 128 VAL 128 128 128 VAL VAL B . n B 1 129 PRO 129 129 129 PRO PRO B . n B 1 130 VAL 130 130 130 VAL VAL B . n B 1 131 VAL 131 131 131 VAL VAL B . n B 1 132 PRO 132 132 132 PRO PRO B . n B 1 133 TRP 133 133 133 TRP TRP B . n B 1 134 VAL 134 134 134 VAL VAL B . n B 1 135 ALA 135 135 135 ALA ALA B . n B 1 136 VAL 136 136 136 VAL VAL B . n B 1 137 ARG 137 137 137 ARG ARG B . n B 1 138 LYS 138 138 138 LYS LYS B . n B 1 139 GLY 139 139 139 GLY GLY B . n B 1 140 GLU 140 140 140 GLU GLU B . n B 1 141 PRO 141 141 141 PRO PRO B . n B 1 142 PRO 142 142 142 PRO PRO B . n B 1 143 VAL 143 143 143 VAL VAL B . n B 1 144 VAL 144 144 144 VAL VAL B . n B 1 145 PRO 145 145 145 PRO PRO B . n B 1 146 PHE 146 146 146 PHE PHE B . n B 1 147 ASP 147 147 147 ASP ASP B . n B 1 148 PRO 148 148 148 PRO PRO B . n B 1 149 PRO 149 149 149 PRO PRO B . n B 1 150 PHE 150 150 150 PHE PHE B . n B 1 151 PHE 151 151 151 PHE PHE B . n B 1 152 VAL 152 152 152 VAL VAL B . n B 1 153 LYS 153 153 153 LYS LYS B . n B 1 154 PRO 154 154 154 PRO PRO B . n B 1 155 ALA 155 155 155 ALA ALA B . n B 1 156 ASN 156 156 156 ASN ASN B . n B 1 157 THR 157 157 157 THR THR B . n B 1 158 GLY 158 158 158 GLY GLY B . n B 1 159 SER 159 159 159 SER SER B . n B 1 160 SER 160 160 160 SER SER B . n B 1 161 VAL 161 161 161 VAL VAL B . n B 1 162 GLY 162 162 162 GLY GLY B . n B 1 163 ILE 163 163 163 ILE ILE B . n B 1 164 SER 164 164 164 SER SER B . n B 1 165 ARG 165 165 165 ARG ARG B . n B 1 166 VAL 166 166 166 VAL VAL B . n B 1 167 GLU 167 167 167 GLU GLU B . n B 1 168 ARG 168 168 168 ARG ARG B . n B 1 169 PHE 169 169 169 PHE PHE B . n B 1 170 GLN 170 170 170 GLN GLN B . n B 1 171 ASP 171 171 171 ASP ASP B . n B 1 172 LEU 172 172 172 LEU LEU B . n B 1 173 GLU 173 173 173 GLU GLU B . n B 1 174 ALA 174 174 174 ALA ALA B . n B 1 175 ALA 175 175 175 ALA ALA B . n B 1 176 LEU 176 176 176 LEU LEU B . n B 1 177 ALA 177 177 177 ALA ALA B . n B 1 178 LEU 178 178 178 LEU LEU B . n B 1 179 ALA 179 179 179 ALA ALA B . n B 1 180 PHE 180 180 180 PHE PHE B . n B 1 181 ARG 181 181 181 ARG ARG B . n B 1 182 TYR 182 182 182 TYR TYR B . n B 1 183 ASP 183 183 183 ASP ASP B . n B 1 184 GLU 184 184 184 GLU GLU B . n B 1 185 LYS 185 185 185 LYS LYS B . n B 1 186 ALA 186 186 186 ALA ALA B . n B 1 187 VAL 187 187 187 VAL VAL B . n B 1 188 VAL 188 188 188 VAL VAL B . n B 1 189 GLU 189 189 189 GLU GLU B . n B 1 190 LYS 190 190 190 LYS LYS B . n B 1 191 ALA 191 191 191 ALA ALA B . n B 1 192 LEU 192 192 192 LEU LEU B . n B 1 193 SER 193 193 193 SER SER B . n B 1 194 PRO 194 194 194 PRO PRO B . n B 1 195 VAL 195 195 195 VAL VAL B . n B 1 196 ARG 196 196 196 ARG ARG B . n B 1 197 GLU 197 197 197 GLU GLU B . n B 1 198 LEU 198 198 198 LEU LEU B . n B 1 199 GLU 199 199 199 GLU GLU B . n B 1 200 VAL 200 200 200 VAL VAL B . n B 1 201 GLY 201 201 201 GLY GLY B . n B 1 202 VAL 202 202 202 VAL VAL B . n B 1 203 LEU 203 203 203 LEU LEU B . n B 1 204 GLY 204 204 204 GLY GLY B . n B 1 205 ASN 205 205 205 ASN ASN B . n B 1 206 VAL 206 206 206 VAL VAL B . n B 1 207 PHE 207 207 207 PHE PHE B . n B 1 208 GLY 208 208 208 GLY GLY B . n B 1 209 GLU 209 209 209 GLU GLU B . n B 1 210 ALA 210 210 210 ALA ALA B . n B 1 211 SER 211 211 211 SER SER B . n B 1 212 PRO 212 212 212 PRO PRO B . n B 1 213 VAL 213 213 213 VAL VAL B . n B 1 214 GLY 214 214 214 GLY GLY B . n B 1 215 GLU 215 215 215 GLU GLU B . n B 1 216 VAL 216 216 216 VAL VAL B . n B 1 217 ARG 217 217 217 ARG ARG B . n B 1 218 TYR 218 218 218 TYR TYR B . n B 1 219 GLU 219 219 219 GLU GLU B . n B 1 220 ALA 220 220 220 ALA ALA B . n B 1 221 PRO 221 221 221 PRO PRO B . n B 1 222 PHE 222 222 222 PHE PHE B . n B 1 223 TYR 223 223 223 TYR TYR B . n B 1 224 ASP 224 224 224 ASP ASP B . n B 1 225 TYR 225 225 225 TYR TYR B . n B 1 226 GLU 226 226 226 GLU GLU B . n B 1 227 THR 227 227 227 THR THR B . n B 1 228 LYS 228 228 228 LYS LYS B . n B 1 229 TYR 229 229 229 TYR TYR B . n B 1 230 THR 230 230 230 THR THR B . n B 1 231 PRO 231 231 231 PRO PRO B . n B 1 232 GLY 232 232 232 GLY GLY B . n B 1 233 ARG 233 233 233 ARG ARG B . n B 1 234 ALA 234 234 234 ALA ALA B . n B 1 235 GLU 235 235 235 GLU GLU B . n B 1 236 LEU 236 236 236 LEU LEU B . n B 1 237 LEU 237 237 237 LEU LEU B . n B 1 238 ILE 238 238 238 ILE ILE B . n B 1 239 PRO 239 239 239 PRO PRO B . n B 1 240 ALA 240 240 240 ALA ALA B . n B 1 241 PRO 241 241 241 PRO PRO B . n B 1 242 LEU 242 242 242 LEU LEU B . n B 1 243 ASP 243 243 243 ASP ASP B . n B 1 244 PRO 244 244 244 PRO PRO B . n B 1 245 GLY 245 245 245 GLY GLY B . n B 1 246 THR 246 246 246 THR THR B . n B 1 247 GLN 247 247 247 GLN GLN B . n B 1 248 GLU 248 248 248 GLU GLU B . n B 1 249 THR 249 249 249 THR THR B . n B 1 250 VAL 250 250 250 VAL VAL B . n B 1 251 GLN 251 251 251 GLN GLN B . n B 1 252 GLU 252 252 252 GLU GLU B . n B 1 253 LEU 253 253 253 LEU LEU B . n B 1 254 ALA 254 254 254 ALA ALA B . n B 1 255 LEU 255 255 255 LEU LEU B . n B 1 256 LYS 256 256 256 LYS LYS B . n B 1 257 ALA 257 257 257 ALA ALA B . n B 1 258 TYR 258 258 258 TYR TYR B . n B 1 259 LYS 259 259 259 LYS LYS B . n B 1 260 VAL 260 260 260 VAL VAL B . n B 1 261 LEU 261 261 261 LEU LEU B . n B 1 262 GLY 262 262 262 GLY GLY B . n B 1 263 VAL 263 263 263 VAL VAL B . n B 1 264 ARG 264 264 264 ARG ARG B . n B 1 265 GLY 265 265 265 GLY GLY B . n B 1 266 MET 266 266 266 MET MET B . n B 1 267 ALA 267 267 267 ALA ALA B . n B 1 268 ARG 268 268 268 ARG ARG B . n B 1 269 VAL 269 269 269 VAL VAL B . n B 1 270 ASP 270 270 270 ASP ASP B . n B 1 271 PHE 271 271 271 PHE PHE B . n B 1 272 PHE 272 272 272 PHE PHE B . n B 1 273 LEU 273 273 273 LEU LEU B . n B 1 274 ALA 274 274 274 ALA ALA B . n B 1 275 GLU 275 275 275 GLU GLU B . n B 1 276 GLY 276 276 276 GLY GLY B . n B 1 277 GLU 277 277 277 GLU GLU B . n B 1 278 LEU 278 278 278 LEU LEU B . n B 1 279 TYR 279 279 279 TYR TYR B . n B 1 280 LEU 280 280 280 LEU LEU B . n B 1 281 ASN 281 281 281 ASN ASN B . n B 1 282 GLU 282 282 282 GLU GLU B . n B 1 283 LEU 283 283 283 LEU LEU B . n B 1 284 ASN 284 284 284 ASN ASN B . n B 1 285 THR 285 285 285 THR THR B . n B 1 286 ILE 286 286 286 ILE ILE B . n B 1 287 PRO 287 287 287 PRO PRO B . n B 1 288 GLY 288 288 288 GLY GLY B . n B 1 289 PHE 289 289 289 PHE PHE B . n B 1 290 THR 290 290 290 THR THR B . n B 1 291 PRO 291 291 291 PRO PRO B . n B 1 292 THR 292 292 292 THR THR B . n B 1 293 SER 293 293 293 SER SER B . n B 1 294 MET 294 294 294 MET MET B . n B 1 295 TYR 295 295 295 TYR TYR B . n B 1 296 PRO 296 296 296 PRO PRO B . n B 1 297 ARG 297 297 297 ARG ARG B . n B 1 298 LEU 298 298 298 LEU LEU B . n B 1 299 PHE 299 299 299 PHE PHE B . n B 1 300 GLU 300 300 300 GLU GLU B . n B 1 301 ALA 301 301 301 ALA ALA B . n B 1 302 GLY 302 302 302 GLY GLY B . n B 1 303 GLY 303 303 303 GLY GLY B . n B 1 304 VAL 304 304 304 VAL VAL B . n B 1 305 ALA 305 305 305 ALA ALA B . n B 1 306 TYR 306 306 306 TYR TYR B . n B 1 307 PRO 307 307 307 PRO PRO B . n B 1 308 GLU 308 308 308 GLU GLU B . n B 1 309 LEU 309 309 309 LEU LEU B . n B 1 310 LEU 310 310 310 LEU LEU B . n B 1 311 ARG 311 311 311 ARG ARG B . n B 1 312 ARG 312 312 312 ARG ARG B . n B 1 313 LEU 313 313 313 LEU LEU B . n B 1 314 VAL 314 314 314 VAL VAL B . n B 1 315 GLU 315 315 315 GLU GLU B . n B 1 316 LEU 316 316 316 LEU LEU B . n B 1 317 ALA 317 317 317 ALA ALA B . n B 1 318 LEU 318 318 318 LEU LEU B . n B 1 319 THR 319 319 319 THR THR B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DAL 1 401 401 DAL DAL A . D 2 DAL 1 402 402 DAL DAL A . E 3 ATP 1 1501 1501 ATP ATP A . F 2 DAL 1 403 403 DAL DAL B . G 2 DAL 1 404 404 DAL DAL B . H 3 ATP 1 1502 1502 ATP ATP B . I 4 HOH 1 1502 1 HOH TIP A . I 4 HOH 2 1503 2 HOH TIP A . I 4 HOH 3 1504 5 HOH TIP A . I 4 HOH 4 1505 6 HOH TIP A . I 4 HOH 5 1506 8 HOH TIP A . I 4 HOH 6 1507 10 HOH TIP A . I 4 HOH 7 1508 11 HOH TIP A . I 4 HOH 8 1509 12 HOH TIP A . I 4 HOH 9 1510 14 HOH TIP A . I 4 HOH 10 1511 18 HOH TIP A . I 4 HOH 11 1512 20 HOH TIP A . I 4 HOH 12 1513 21 HOH TIP A . I 4 HOH 13 1514 22 HOH TIP A . I 4 HOH 14 1515 23 HOH TIP A . I 4 HOH 15 1516 24 HOH TIP A . I 4 HOH 16 1517 25 HOH TIP A . I 4 HOH 17 1518 26 HOH TIP A . I 4 HOH 18 1519 27 HOH TIP A . I 4 HOH 19 1520 29 HOH TIP A . I 4 HOH 20 1521 31 HOH TIP A . I 4 HOH 21 1522 32 HOH TIP A . I 4 HOH 22 1523 34 HOH TIP A . I 4 HOH 23 1524 35 HOH TIP A . I 4 HOH 24 1525 36 HOH TIP A . I 4 HOH 25 1526 37 HOH TIP A . I 4 HOH 26 1527 39 HOH TIP A . I 4 HOH 27 1528 41 HOH TIP A . I 4 HOH 28 1529 43 HOH TIP A . I 4 HOH 29 1530 44 HOH TIP A . I 4 HOH 30 1531 46 HOH TIP A . I 4 HOH 31 1532 47 HOH TIP A . I 4 HOH 32 1533 48 HOH TIP A . I 4 HOH 33 1534 49 HOH TIP A . I 4 HOH 34 1535 50 HOH TIP A . I 4 HOH 35 1536 55 HOH TIP A . I 4 HOH 36 1537 56 HOH TIP A . I 4 HOH 37 1538 57 HOH TIP A . I 4 HOH 38 1539 60 HOH TIP A . I 4 HOH 39 1540 61 HOH TIP A . I 4 HOH 40 1541 62 HOH TIP A . I 4 HOH 41 1542 63 HOH TIP A . I 4 HOH 42 1543 64 HOH TIP A . I 4 HOH 43 1544 67 HOH TIP A . I 4 HOH 44 1545 68 HOH TIP A . I 4 HOH 45 1546 69 HOH TIP A . I 4 HOH 46 1547 70 HOH TIP A . I 4 HOH 47 1548 71 HOH TIP A . I 4 HOH 48 1549 72 HOH TIP A . I 4 HOH 49 1550 73 HOH TIP A . I 4 HOH 50 1551 74 HOH TIP A . I 4 HOH 51 1552 75 HOH TIP A . I 4 HOH 52 1553 76 HOH TIP A . I 4 HOH 53 1554 77 HOH TIP A . I 4 HOH 54 1555 79 HOH TIP A . I 4 HOH 55 1556 80 HOH TIP A . I 4 HOH 56 1557 82 HOH TIP A . I 4 HOH 57 1558 83 HOH TIP A . I 4 HOH 58 1559 85 HOH TIP A . I 4 HOH 59 1560 86 HOH TIP A . I 4 HOH 60 1561 88 HOH TIP A . I 4 HOH 61 1562 90 HOH TIP A . I 4 HOH 62 1563 92 HOH TIP A . I 4 HOH 63 1564 93 HOH TIP A . I 4 HOH 64 1565 94 HOH TIP A . I 4 HOH 65 1566 95 HOH TIP A . I 4 HOH 66 1567 96 HOH TIP A . I 4 HOH 67 1568 97 HOH TIP A . I 4 HOH 68 1569 99 HOH TIP A . I 4 HOH 69 1570 100 HOH TIP A . I 4 HOH 70 1571 101 HOH TIP A . I 4 HOH 71 1572 102 HOH TIP A . I 4 HOH 72 1573 103 HOH TIP A . I 4 HOH 73 1574 104 HOH TIP A . I 4 HOH 74 1575 105 HOH TIP A . I 4 HOH 75 1576 106 HOH TIP A . I 4 HOH 76 1577 107 HOH TIP A . I 4 HOH 77 1578 108 HOH TIP A . I 4 HOH 78 1579 130 HOH TIP A . I 4 HOH 79 1580 131 HOH TIP A . I 4 HOH 80 1581 133 HOH TIP A . I 4 HOH 81 1582 134 HOH TIP A . I 4 HOH 82 1583 136 HOH TIP A . I 4 HOH 83 1584 138 HOH TIP A . I 4 HOH 84 1585 139 HOH TIP A . I 4 HOH 85 1586 140 HOH TIP A . I 4 HOH 86 1587 141 HOH TIP A . I 4 HOH 87 1588 142 HOH TIP A . I 4 HOH 88 1589 143 HOH TIP A . I 4 HOH 89 1590 144 HOH TIP A . I 4 HOH 90 1591 145 HOH TIP A . I 4 HOH 91 1592 147 HOH TIP A . I 4 HOH 92 1593 148 HOH TIP A . I 4 HOH 93 1594 150 HOH TIP A . I 4 HOH 94 1595 152 HOH TIP A . I 4 HOH 95 1596 154 HOH TIP A . I 4 HOH 96 1597 155 HOH TIP A . I 4 HOH 97 1598 156 HOH TIP A . I 4 HOH 98 1599 157 HOH TIP A . I 4 HOH 99 1600 159 HOH TIP A . I 4 HOH 100 1601 160 HOH TIP A . I 4 HOH 101 1602 161 HOH TIP A . I 4 HOH 102 1603 162 HOH TIP A . I 4 HOH 103 1604 164 HOH TIP A . I 4 HOH 104 1605 165 HOH TIP A . I 4 HOH 105 1606 166 HOH TIP A . I 4 HOH 106 1607 167 HOH TIP A . I 4 HOH 107 1608 168 HOH TIP A . I 4 HOH 108 1609 169 HOH TIP A . I 4 HOH 109 1610 170 HOH TIP A . I 4 HOH 110 1611 171 HOH TIP A . I 4 HOH 111 1612 172 HOH TIP A . I 4 HOH 112 1613 173 HOH TIP A . I 4 HOH 113 1614 174 HOH TIP A . I 4 HOH 114 1615 175 HOH TIP A . I 4 HOH 115 1616 176 HOH TIP A . I 4 HOH 116 1617 177 HOH TIP A . I 4 HOH 117 1618 179 HOH TIP A . I 4 HOH 118 1619 180 HOH TIP A . I 4 HOH 119 1620 181 HOH TIP A . I 4 HOH 120 1621 187 HOH TIP A . I 4 HOH 121 1622 189 HOH TIP A . I 4 HOH 122 1623 190 HOH TIP A . I 4 HOH 123 1624 191 HOH TIP A . I 4 HOH 124 1625 192 HOH TIP A . I 4 HOH 125 1626 193 HOH TIP A . I 4 HOH 126 1627 194 HOH TIP A . J 4 HOH 1 1503 3 HOH TIP B . J 4 HOH 2 1504 4 HOH TIP B . J 4 HOH 3 1505 7 HOH TIP B . J 4 HOH 4 1506 9 HOH TIP B . J 4 HOH 5 1507 13 HOH TIP B . J 4 HOH 6 1508 15 HOH TIP B . J 4 HOH 7 1509 16 HOH TIP B . J 4 HOH 8 1510 17 HOH TIP B . J 4 HOH 9 1511 19 HOH TIP B . J 4 HOH 10 1512 28 HOH TIP B . J 4 HOH 11 1513 30 HOH TIP B . J 4 HOH 12 1514 33 HOH TIP B . J 4 HOH 13 1515 38 HOH TIP B . J 4 HOH 14 1516 40 HOH TIP B . J 4 HOH 15 1517 42 HOH TIP B . J 4 HOH 16 1518 45 HOH TIP B . J 4 HOH 17 1519 51 HOH TIP B . J 4 HOH 18 1520 52 HOH TIP B . J 4 HOH 19 1521 53 HOH TIP B . J 4 HOH 20 1522 54 HOH TIP B . J 4 HOH 21 1523 58 HOH TIP B . J 4 HOH 22 1524 59 HOH TIP B . J 4 HOH 23 1525 65 HOH TIP B . J 4 HOH 24 1526 66 HOH TIP B . J 4 HOH 25 1527 78 HOH TIP B . J 4 HOH 26 1528 81 HOH TIP B . J 4 HOH 27 1529 84 HOH TIP B . J 4 HOH 28 1530 87 HOH TIP B . J 4 HOH 29 1531 89 HOH TIP B . J 4 HOH 30 1532 91 HOH TIP B . J 4 HOH 31 1533 98 HOH TIP B . J 4 HOH 32 1534 109 HOH TIP B . J 4 HOH 33 1535 110 HOH TIP B . J 4 HOH 34 1536 111 HOH TIP B . J 4 HOH 35 1537 112 HOH TIP B . J 4 HOH 36 1538 113 HOH TIP B . J 4 HOH 37 1539 114 HOH TIP B . J 4 HOH 38 1540 115 HOH TIP B . J 4 HOH 39 1541 116 HOH TIP B . J 4 HOH 40 1542 117 HOH TIP B . J 4 HOH 41 1543 118 HOH TIP B . J 4 HOH 42 1544 119 HOH TIP B . J 4 HOH 43 1545 120 HOH TIP B . J 4 HOH 44 1546 121 HOH TIP B . J 4 HOH 45 1547 122 HOH TIP B . J 4 HOH 46 1548 123 HOH TIP B . J 4 HOH 47 1549 124 HOH TIP B . J 4 HOH 48 1550 125 HOH TIP B . J 4 HOH 49 1551 126 HOH TIP B . J 4 HOH 50 1552 127 HOH TIP B . J 4 HOH 51 1553 128 HOH TIP B . J 4 HOH 52 1554 129 HOH TIP B . J 4 HOH 53 1555 132 HOH TIP B . J 4 HOH 54 1556 135 HOH TIP B . J 4 HOH 55 1557 137 HOH TIP B . J 4 HOH 56 1558 146 HOH TIP B . J 4 HOH 57 1559 149 HOH TIP B . J 4 HOH 58 1560 151 HOH TIP B . J 4 HOH 59 1561 153 HOH TIP B . J 4 HOH 60 1562 158 HOH TIP B . J 4 HOH 61 1563 163 HOH TIP B . J 4 HOH 62 1564 178 HOH TIP B . J 4 HOH 63 1565 182 HOH TIP B . J 4 HOH 64 1566 183 HOH TIP B . J 4 HOH 65 1567 184 HOH TIP B . J 4 HOH 66 1568 185 HOH TIP B . J 4 HOH 67 1569 186 HOH TIP B . J 4 HOH 68 1570 188 HOH TIP B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4560 ? 1 MORE -21 ? 1 'SSA (A^2)' 23820 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-05-27 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 BSS 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 MOLREP phasing . ? 5 # _pdbx_entry_details.entry_id 2ZDQ _pdbx_entry_details.nonpolymer_details 'RESIDUES A 401-402 AND B 403-404 FORM TWO DIPEPTIDE SUBSTRATES BOUND TO THE ENZYME' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 DAL _pdbx_validate_close_contact.auth_seq_id_1 403 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 DAL _pdbx_validate_close_contact.auth_seq_id_2 404 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 56 ? ? 75.47 -37.09 2 1 PRO A 145 ? ? -73.76 30.35 3 1 VAL A 206 ? ? 67.57 -55.84 4 1 PRO A 241 ? ? -67.67 73.69 5 1 ALA A 267 ? ? -177.77 143.52 6 1 VAL B 206 ? ? 69.53 -52.56 7 1 ALA B 267 ? ? -175.59 146.08 8 1 ASN B 281 ? ? -86.14 -70.42 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 ATP PG P N N 74 ATP O1G O N N 75 ATP O2G O N N 76 ATP O3G O N N 77 ATP PB P N R 78 ATP O1B O N N 79 ATP O2B O N N 80 ATP O3B O N N 81 ATP PA P N R 82 ATP O1A O N N 83 ATP O2A O N N 84 ATP O3A O N N 85 ATP "O5'" O N N 86 ATP "C5'" C N N 87 ATP "C4'" C N R 88 ATP "O4'" O N N 89 ATP "C3'" C N S 90 ATP "O3'" O N N 91 ATP "C2'" C N R 92 ATP "O2'" O N N 93 ATP "C1'" C N R 94 ATP N9 N Y N 95 ATP C8 C Y N 96 ATP N7 N Y N 97 ATP C5 C Y N 98 ATP C6 C Y N 99 ATP N6 N N N 100 ATP N1 N Y N 101 ATP C2 C Y N 102 ATP N3 N Y N 103 ATP C4 C Y N 104 ATP HOG2 H N N 105 ATP HOG3 H N N 106 ATP HOB2 H N N 107 ATP HOA2 H N N 108 ATP "H5'1" H N N 109 ATP "H5'2" H N N 110 ATP "H4'" H N N 111 ATP "H3'" H N N 112 ATP "HO3'" H N N 113 ATP "H2'" H N N 114 ATP "HO2'" H N N 115 ATP "H1'" H N N 116 ATP H8 H N N 117 ATP HN61 H N N 118 ATP HN62 H N N 119 ATP H2 H N N 120 CYS N N N N 121 CYS CA C N R 122 CYS C C N N 123 CYS O O N N 124 CYS CB C N N 125 CYS SG S N N 126 CYS OXT O N N 127 CYS H H N N 128 CYS H2 H N N 129 CYS HA H N N 130 CYS HB2 H N N 131 CYS HB3 H N N 132 CYS HG H N N 133 CYS HXT H N N 134 DAL N N N N 135 DAL CA C N R 136 DAL CB C N N 137 DAL C C N N 138 DAL O O N N 139 DAL OXT O N N 140 DAL H H N N 141 DAL H2 H N N 142 DAL HA H N N 143 DAL HB1 H N N 144 DAL HB2 H N N 145 DAL HB3 H N N 146 DAL HXT H N N 147 GLN N N N N 148 GLN CA C N S 149 GLN C C N N 150 GLN O O N N 151 GLN CB C N N 152 GLN CG C N N 153 GLN CD C N N 154 GLN OE1 O N N 155 GLN NE2 N N N 156 GLN OXT O N N 157 GLN H H N N 158 GLN H2 H N N 159 GLN HA H N N 160 GLN HB2 H N N 161 GLN HB3 H N N 162 GLN HG2 H N N 163 GLN HG3 H N N 164 GLN HE21 H N N 165 GLN HE22 H N N 166 GLN HXT H N N 167 GLU N N N N 168 GLU CA C N S 169 GLU C C N N 170 GLU O O N N 171 GLU CB C N N 172 GLU CG C N N 173 GLU CD C N N 174 GLU OE1 O N N 175 GLU OE2 O N N 176 GLU OXT O N N 177 GLU H H N N 178 GLU H2 H N N 179 GLU HA H N N 180 GLU HB2 H N N 181 GLU HB3 H N N 182 GLU HG2 H N N 183 GLU HG3 H N N 184 GLU HE2 H N N 185 GLU HXT H N N 186 GLY N N N N 187 GLY CA C N N 188 GLY C C N N 189 GLY O O N N 190 GLY OXT O N N 191 GLY H H N N 192 GLY H2 H N N 193 GLY HA2 H N N 194 GLY HA3 H N N 195 GLY HXT H N N 196 HIS N N N N 197 HIS CA C N S 198 HIS C C N N 199 HIS O O N N 200 HIS CB C N N 201 HIS CG C Y N 202 HIS ND1 N Y N 203 HIS CD2 C Y N 204 HIS CE1 C Y N 205 HIS NE2 N Y N 206 HIS OXT O N N 207 HIS H H N N 208 HIS H2 H N N 209 HIS HA H N N 210 HIS HB2 H N N 211 HIS HB3 H N N 212 HIS HD1 H N N 213 HIS HD2 H N N 214 HIS HE1 H N N 215 HIS HE2 H N N 216 HIS HXT H N N 217 HOH O O N N 218 HOH H1 H N N 219 HOH H2 H N N 220 ILE N N N N 221 ILE CA C N S 222 ILE C C N N 223 ILE O O N N 224 ILE CB C N S 225 ILE CG1 C N N 226 ILE CG2 C N N 227 ILE CD1 C N N 228 ILE OXT O N N 229 ILE H H N N 230 ILE H2 H N N 231 ILE HA H N N 232 ILE HB H N N 233 ILE HG12 H N N 234 ILE HG13 H N N 235 ILE HG21 H N N 236 ILE HG22 H N N 237 ILE HG23 H N N 238 ILE HD11 H N N 239 ILE HD12 H N N 240 ILE HD13 H N N 241 ILE HXT H N N 242 LEU N N N N 243 LEU CA C N S 244 LEU C C N N 245 LEU O O N N 246 LEU CB C N N 247 LEU CG C N N 248 LEU CD1 C N N 249 LEU CD2 C N N 250 LEU OXT O N N 251 LEU H H N N 252 LEU H2 H N N 253 LEU HA H N N 254 LEU HB2 H N N 255 LEU HB3 H N N 256 LEU HG H N N 257 LEU HD11 H N N 258 LEU HD12 H N N 259 LEU HD13 H N N 260 LEU HD21 H N N 261 LEU HD22 H N N 262 LEU HD23 H N N 263 LEU HXT H N N 264 LYS N N N N 265 LYS CA C N S 266 LYS C C N N 267 LYS O O N N 268 LYS CB C N N 269 LYS CG C N N 270 LYS CD C N N 271 LYS CE C N N 272 LYS NZ N N N 273 LYS OXT O N N 274 LYS H H N N 275 LYS H2 H N N 276 LYS HA H N N 277 LYS HB2 H N N 278 LYS HB3 H N N 279 LYS HG2 H N N 280 LYS HG3 H N N 281 LYS HD2 H N N 282 LYS HD3 H N N 283 LYS HE2 H N N 284 LYS HE3 H N N 285 LYS HZ1 H N N 286 LYS HZ2 H N N 287 LYS HZ3 H N N 288 LYS HXT H N N 289 MET N N N N 290 MET CA C N S 291 MET C C N N 292 MET O O N N 293 MET CB C N N 294 MET CG C N N 295 MET SD S N N 296 MET CE C N N 297 MET OXT O N N 298 MET H H N N 299 MET H2 H N N 300 MET HA H N N 301 MET HB2 H N N 302 MET HB3 H N N 303 MET HG2 H N N 304 MET HG3 H N N 305 MET HE1 H N N 306 MET HE2 H N N 307 MET HE3 H N N 308 MET HXT H N N 309 PHE N N N N 310 PHE CA C N S 311 PHE C C N N 312 PHE O O N N 313 PHE CB C N N 314 PHE CG C Y N 315 PHE CD1 C Y N 316 PHE CD2 C Y N 317 PHE CE1 C Y N 318 PHE CE2 C Y N 319 PHE CZ C Y N 320 PHE OXT O N N 321 PHE H H N N 322 PHE H2 H N N 323 PHE HA H N N 324 PHE HB2 H N N 325 PHE HB3 H N N 326 PHE HD1 H N N 327 PHE HD2 H N N 328 PHE HE1 H N N 329 PHE HE2 H N N 330 PHE HZ H N N 331 PHE HXT H N N 332 PRO N N N N 333 PRO CA C N S 334 PRO C C N N 335 PRO O O N N 336 PRO CB C N N 337 PRO CG C N N 338 PRO CD C N N 339 PRO OXT O N N 340 PRO H H N N 341 PRO HA H N N 342 PRO HB2 H N N 343 PRO HB3 H N N 344 PRO HG2 H N N 345 PRO HG3 H N N 346 PRO HD2 H N N 347 PRO HD3 H N N 348 PRO HXT H N N 349 SER N N N N 350 SER CA C N S 351 SER C C N N 352 SER O O N N 353 SER CB C N N 354 SER OG O N N 355 SER OXT O N N 356 SER H H N N 357 SER H2 H N N 358 SER HA H N N 359 SER HB2 H N N 360 SER HB3 H N N 361 SER HG H N N 362 SER HXT H N N 363 THR N N N N 364 THR CA C N S 365 THR C C N N 366 THR O O N N 367 THR CB C N R 368 THR OG1 O N N 369 THR CG2 C N N 370 THR OXT O N N 371 THR H H N N 372 THR H2 H N N 373 THR HA H N N 374 THR HB H N N 375 THR HG1 H N N 376 THR HG21 H N N 377 THR HG22 H N N 378 THR HG23 H N N 379 THR HXT H N N 380 TRP N N N N 381 TRP CA C N S 382 TRP C C N N 383 TRP O O N N 384 TRP CB C N N 385 TRP CG C Y N 386 TRP CD1 C Y N 387 TRP CD2 C Y N 388 TRP NE1 N Y N 389 TRP CE2 C Y N 390 TRP CE3 C Y N 391 TRP CZ2 C Y N 392 TRP CZ3 C Y N 393 TRP CH2 C Y N 394 TRP OXT O N N 395 TRP H H N N 396 TRP H2 H N N 397 TRP HA H N N 398 TRP HB2 H N N 399 TRP HB3 H N N 400 TRP HD1 H N N 401 TRP HE1 H N N 402 TRP HE3 H N N 403 TRP HZ2 H N N 404 TRP HZ3 H N N 405 TRP HH2 H N N 406 TRP HXT H N N 407 TYR N N N N 408 TYR CA C N S 409 TYR C C N N 410 TYR O O N N 411 TYR CB C N N 412 TYR CG C Y N 413 TYR CD1 C Y N 414 TYR CD2 C Y N 415 TYR CE1 C Y N 416 TYR CE2 C Y N 417 TYR CZ C Y N 418 TYR OH O N N 419 TYR OXT O N N 420 TYR H H N N 421 TYR H2 H N N 422 TYR HA H N N 423 TYR HB2 H N N 424 TYR HB3 H N N 425 TYR HD1 H N N 426 TYR HD2 H N N 427 TYR HE1 H N N 428 TYR HE2 H N N 429 TYR HH H N N 430 TYR HXT H N N 431 VAL N N N N 432 VAL CA C N S 433 VAL C C N N 434 VAL O O N N 435 VAL CB C N N 436 VAL CG1 C N N 437 VAL CG2 C N N 438 VAL OXT O N N 439 VAL H H N N 440 VAL H2 H N N 441 VAL HA H N N 442 VAL HB H N N 443 VAL HG11 H N N 444 VAL HG12 H N N 445 VAL HG13 H N N 446 VAL HG21 H N N 447 VAL HG22 H N N 448 VAL HG23 H N N 449 VAL HXT H N N 450 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 ATP PG O1G doub N N 70 ATP PG O2G sing N N 71 ATP PG O3G sing N N 72 ATP PG O3B sing N N 73 ATP O2G HOG2 sing N N 74 ATP O3G HOG3 sing N N 75 ATP PB O1B doub N N 76 ATP PB O2B sing N N 77 ATP PB O3B sing N N 78 ATP PB O3A sing N N 79 ATP O2B HOB2 sing N N 80 ATP PA O1A doub N N 81 ATP PA O2A sing N N 82 ATP PA O3A sing N N 83 ATP PA "O5'" sing N N 84 ATP O2A HOA2 sing N N 85 ATP "O5'" "C5'" sing N N 86 ATP "C5'" "C4'" sing N N 87 ATP "C5'" "H5'1" sing N N 88 ATP "C5'" "H5'2" sing N N 89 ATP "C4'" "O4'" sing N N 90 ATP "C4'" "C3'" sing N N 91 ATP "C4'" "H4'" sing N N 92 ATP "O4'" "C1'" sing N N 93 ATP "C3'" "O3'" sing N N 94 ATP "C3'" "C2'" sing N N 95 ATP "C3'" "H3'" sing N N 96 ATP "O3'" "HO3'" sing N N 97 ATP "C2'" "O2'" sing N N 98 ATP "C2'" "C1'" sing N N 99 ATP "C2'" "H2'" sing N N 100 ATP "O2'" "HO2'" sing N N 101 ATP "C1'" N9 sing N N 102 ATP "C1'" "H1'" sing N N 103 ATP N9 C8 sing Y N 104 ATP N9 C4 sing Y N 105 ATP C8 N7 doub Y N 106 ATP C8 H8 sing N N 107 ATP N7 C5 sing Y N 108 ATP C5 C6 sing Y N 109 ATP C5 C4 doub Y N 110 ATP C6 N6 sing N N 111 ATP C6 N1 doub Y N 112 ATP N6 HN61 sing N N 113 ATP N6 HN62 sing N N 114 ATP N1 C2 sing Y N 115 ATP C2 N3 doub Y N 116 ATP C2 H2 sing N N 117 ATP N3 C4 sing Y N 118 CYS N CA sing N N 119 CYS N H sing N N 120 CYS N H2 sing N N 121 CYS CA C sing N N 122 CYS CA CB sing N N 123 CYS CA HA sing N N 124 CYS C O doub N N 125 CYS C OXT sing N N 126 CYS CB SG sing N N 127 CYS CB HB2 sing N N 128 CYS CB HB3 sing N N 129 CYS SG HG sing N N 130 CYS OXT HXT sing N N 131 DAL N CA sing N N 132 DAL N H sing N N 133 DAL N H2 sing N N 134 DAL CA CB sing N N 135 DAL CA C sing N N 136 DAL CA HA sing N N 137 DAL CB HB1 sing N N 138 DAL CB HB2 sing N N 139 DAL CB HB3 sing N N 140 DAL C O doub N N 141 DAL C OXT sing N N 142 DAL OXT HXT sing N N 143 GLN N CA sing N N 144 GLN N H sing N N 145 GLN N H2 sing N N 146 GLN CA C sing N N 147 GLN CA CB sing N N 148 GLN CA HA sing N N 149 GLN C O doub N N 150 GLN C OXT sing N N 151 GLN CB CG sing N N 152 GLN CB HB2 sing N N 153 GLN CB HB3 sing N N 154 GLN CG CD sing N N 155 GLN CG HG2 sing N N 156 GLN CG HG3 sing N N 157 GLN CD OE1 doub N N 158 GLN CD NE2 sing N N 159 GLN NE2 HE21 sing N N 160 GLN NE2 HE22 sing N N 161 GLN OXT HXT sing N N 162 GLU N CA sing N N 163 GLU N H sing N N 164 GLU N H2 sing N N 165 GLU CA C sing N N 166 GLU CA CB sing N N 167 GLU CA HA sing N N 168 GLU C O doub N N 169 GLU C OXT sing N N 170 GLU CB CG sing N N 171 GLU CB HB2 sing N N 172 GLU CB HB3 sing N N 173 GLU CG CD sing N N 174 GLU CG HG2 sing N N 175 GLU CG HG3 sing N N 176 GLU CD OE1 doub N N 177 GLU CD OE2 sing N N 178 GLU OE2 HE2 sing N N 179 GLU OXT HXT sing N N 180 GLY N CA sing N N 181 GLY N H sing N N 182 GLY N H2 sing N N 183 GLY CA C sing N N 184 GLY CA HA2 sing N N 185 GLY CA HA3 sing N N 186 GLY C O doub N N 187 GLY C OXT sing N N 188 GLY OXT HXT sing N N 189 HIS N CA sing N N 190 HIS N H sing N N 191 HIS N H2 sing N N 192 HIS CA C sing N N 193 HIS CA CB sing N N 194 HIS CA HA sing N N 195 HIS C O doub N N 196 HIS C OXT sing N N 197 HIS CB CG sing N N 198 HIS CB HB2 sing N N 199 HIS CB HB3 sing N N 200 HIS CG ND1 sing Y N 201 HIS CG CD2 doub Y N 202 HIS ND1 CE1 doub Y N 203 HIS ND1 HD1 sing N N 204 HIS CD2 NE2 sing Y N 205 HIS CD2 HD2 sing N N 206 HIS CE1 NE2 sing Y N 207 HIS CE1 HE1 sing N N 208 HIS NE2 HE2 sing N N 209 HIS OXT HXT sing N N 210 HOH O H1 sing N N 211 HOH O H2 sing N N 212 ILE N CA sing N N 213 ILE N H sing N N 214 ILE N H2 sing N N 215 ILE CA C sing N N 216 ILE CA CB sing N N 217 ILE CA HA sing N N 218 ILE C O doub N N 219 ILE C OXT sing N N 220 ILE CB CG1 sing N N 221 ILE CB CG2 sing N N 222 ILE CB HB sing N N 223 ILE CG1 CD1 sing N N 224 ILE CG1 HG12 sing N N 225 ILE CG1 HG13 sing N N 226 ILE CG2 HG21 sing N N 227 ILE CG2 HG22 sing N N 228 ILE CG2 HG23 sing N N 229 ILE CD1 HD11 sing N N 230 ILE CD1 HD12 sing N N 231 ILE CD1 HD13 sing N N 232 ILE OXT HXT sing N N 233 LEU N CA sing N N 234 LEU N H sing N N 235 LEU N H2 sing N N 236 LEU CA C sing N N 237 LEU CA CB sing N N 238 LEU CA HA sing N N 239 LEU C O doub N N 240 LEU C OXT sing N N 241 LEU CB CG sing N N 242 LEU CB HB2 sing N N 243 LEU CB HB3 sing N N 244 LEU CG CD1 sing N N 245 LEU CG CD2 sing N N 246 LEU CG HG sing N N 247 LEU CD1 HD11 sing N N 248 LEU CD1 HD12 sing N N 249 LEU CD1 HD13 sing N N 250 LEU CD2 HD21 sing N N 251 LEU CD2 HD22 sing N N 252 LEU CD2 HD23 sing N N 253 LEU OXT HXT sing N N 254 LYS N CA sing N N 255 LYS N H sing N N 256 LYS N H2 sing N N 257 LYS CA C sing N N 258 LYS CA CB sing N N 259 LYS CA HA sing N N 260 LYS C O doub N N 261 LYS C OXT sing N N 262 LYS CB CG sing N N 263 LYS CB HB2 sing N N 264 LYS CB HB3 sing N N 265 LYS CG CD sing N N 266 LYS CG HG2 sing N N 267 LYS CG HG3 sing N N 268 LYS CD CE sing N N 269 LYS CD HD2 sing N N 270 LYS CD HD3 sing N N 271 LYS CE NZ sing N N 272 LYS CE HE2 sing N N 273 LYS CE HE3 sing N N 274 LYS NZ HZ1 sing N N 275 LYS NZ HZ2 sing N N 276 LYS NZ HZ3 sing N N 277 LYS OXT HXT sing N N 278 MET N CA sing N N 279 MET N H sing N N 280 MET N H2 sing N N 281 MET CA C sing N N 282 MET CA CB sing N N 283 MET CA HA sing N N 284 MET C O doub N N 285 MET C OXT sing N N 286 MET CB CG sing N N 287 MET CB HB2 sing N N 288 MET CB HB3 sing N N 289 MET CG SD sing N N 290 MET CG HG2 sing N N 291 MET CG HG3 sing N N 292 MET SD CE sing N N 293 MET CE HE1 sing N N 294 MET CE HE2 sing N N 295 MET CE HE3 sing N N 296 MET OXT HXT sing N N 297 PHE N CA sing N N 298 PHE N H sing N N 299 PHE N H2 sing N N 300 PHE CA C sing N N 301 PHE CA CB sing N N 302 PHE CA HA sing N N 303 PHE C O doub N N 304 PHE C OXT sing N N 305 PHE CB CG sing N N 306 PHE CB HB2 sing N N 307 PHE CB HB3 sing N N 308 PHE CG CD1 doub Y N 309 PHE CG CD2 sing Y N 310 PHE CD1 CE1 sing Y N 311 PHE CD1 HD1 sing N N 312 PHE CD2 CE2 doub Y N 313 PHE CD2 HD2 sing N N 314 PHE CE1 CZ doub Y N 315 PHE CE1 HE1 sing N N 316 PHE CE2 CZ sing Y N 317 PHE CE2 HE2 sing N N 318 PHE CZ HZ sing N N 319 PHE OXT HXT sing N N 320 PRO N CA sing N N 321 PRO N CD sing N N 322 PRO N H sing N N 323 PRO CA C sing N N 324 PRO CA CB sing N N 325 PRO CA HA sing N N 326 PRO C O doub N N 327 PRO C OXT sing N N 328 PRO CB CG sing N N 329 PRO CB HB2 sing N N 330 PRO CB HB3 sing N N 331 PRO CG CD sing N N 332 PRO CG HG2 sing N N 333 PRO CG HG3 sing N N 334 PRO CD HD2 sing N N 335 PRO CD HD3 sing N N 336 PRO OXT HXT sing N N 337 SER N CA sing N N 338 SER N H sing N N 339 SER N H2 sing N N 340 SER CA C sing N N 341 SER CA CB sing N N 342 SER CA HA sing N N 343 SER C O doub N N 344 SER C OXT sing N N 345 SER CB OG sing N N 346 SER CB HB2 sing N N 347 SER CB HB3 sing N N 348 SER OG HG sing N N 349 SER OXT HXT sing N N 350 THR N CA sing N N 351 THR N H sing N N 352 THR N H2 sing N N 353 THR CA C sing N N 354 THR CA CB sing N N 355 THR CA HA sing N N 356 THR C O doub N N 357 THR C OXT sing N N 358 THR CB OG1 sing N N 359 THR CB CG2 sing N N 360 THR CB HB sing N N 361 THR OG1 HG1 sing N N 362 THR CG2 HG21 sing N N 363 THR CG2 HG22 sing N N 364 THR CG2 HG23 sing N N 365 THR OXT HXT sing N N 366 TRP N CA sing N N 367 TRP N H sing N N 368 TRP N H2 sing N N 369 TRP CA C sing N N 370 TRP CA CB sing N N 371 TRP CA HA sing N N 372 TRP C O doub N N 373 TRP C OXT sing N N 374 TRP CB CG sing N N 375 TRP CB HB2 sing N N 376 TRP CB HB3 sing N N 377 TRP CG CD1 doub Y N 378 TRP CG CD2 sing Y N 379 TRP CD1 NE1 sing Y N 380 TRP CD1 HD1 sing N N 381 TRP CD2 CE2 doub Y N 382 TRP CD2 CE3 sing Y N 383 TRP NE1 CE2 sing Y N 384 TRP NE1 HE1 sing N N 385 TRP CE2 CZ2 sing Y N 386 TRP CE3 CZ3 doub Y N 387 TRP CE3 HE3 sing N N 388 TRP CZ2 CH2 doub Y N 389 TRP CZ2 HZ2 sing N N 390 TRP CZ3 CH2 sing Y N 391 TRP CZ3 HZ3 sing N N 392 TRP CH2 HH2 sing N N 393 TRP OXT HXT sing N N 394 TYR N CA sing N N 395 TYR N H sing N N 396 TYR N H2 sing N N 397 TYR CA C sing N N 398 TYR CA CB sing N N 399 TYR CA HA sing N N 400 TYR C O doub N N 401 TYR C OXT sing N N 402 TYR CB CG sing N N 403 TYR CB HB2 sing N N 404 TYR CB HB3 sing N N 405 TYR CG CD1 doub Y N 406 TYR CG CD2 sing Y N 407 TYR CD1 CE1 sing Y N 408 TYR CD1 HD1 sing N N 409 TYR CD2 CE2 doub Y N 410 TYR CD2 HD2 sing N N 411 TYR CE1 CZ doub Y N 412 TYR CE1 HE1 sing N N 413 TYR CE2 CZ sing Y N 414 TYR CE2 HE2 sing N N 415 TYR CZ OH sing N N 416 TYR OH HH sing N N 417 TYR OXT HXT sing N N 418 VAL N CA sing N N 419 VAL N H sing N N 420 VAL N H2 sing N N 421 VAL CA C sing N N 422 VAL CA CB sing N N 423 VAL CA HA sing N N 424 VAL C O doub N N 425 VAL C OXT sing N N 426 VAL CB CG1 sing N N 427 VAL CB CG2 sing N N 428 VAL CB HB sing N N 429 VAL CG1 HG11 sing N N 430 VAL CG1 HG12 sing N N 431 VAL CG1 HG13 sing N N 432 VAL CG2 HG21 sing N N 433 VAL CG2 HG22 sing N N 434 VAL CG2 HG23 sing N N 435 VAL OXT HXT sing N N 436 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 D-ALANINE DAL 3 "ADENOSINE-5'-TRIPHOSPHATE" ATP 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2ZDG _pdbx_initial_refinement_model.details ? #