HEADER SIGNALING PROTEIN/TRANSFERASE 29-DEC-07 2ZFD TITLE THE CRYSTAL STRUCTURE OF PLANT SPECIFIC CALCIUM BINDING PROTEIN ATCBL2 TITLE 2 IN COMPLEX WITH THE REGULATORY DOMAIN OF ATCIPK14 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALCINEURIN B-LIKE PROTEIN 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SOS3-LIKE CALCIUM-BINDING PROTEIN 1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN T20L15_90; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: UNP RESIDUES 305-427; COMPND 10 SYNONYM: PUTATIVE UNCHARACTERIZED PROTEIN AT5G01820, CBL-INTERACTING COMPND 11 PROTEIN KINASE 14, SERINE/THREONINE PROTEIN KINASE; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: CBL2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETDUET-1; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 12 ORGANISM_COMMON: THALE CRESS; SOURCE 13 ORGANISM_TAXID: 3702; SOURCE 14 GENE: CIPK14; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PETDUET-1 KEYWDS CALCIUM BINDING PROTEIN, PROTEIN-PROTEIN COMPLEX, ATP-BINDING, KEYWDS 2 KINASE, NUCLEOTIDE-BINDING, SERINE/THREONINE-PROTEIN KINASE, KEYWDS 3 TRANSFERASE, SIGNALING PROTEIN-TRANSFERASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.AKABOSHI,H.HASHIMOTO,H.ISHIDA,N.KOIZUMI,M.SATO,T.SHIMIZU REVDAT 5 13-MAR-24 2ZFD 1 REMARK LINK REVDAT 4 13-JUL-11 2ZFD 1 VERSN REVDAT 3 24-FEB-09 2ZFD 1 VERSN REVDAT 2 22-APR-08 2ZFD 1 JRNL REVDAT 1 19-FEB-08 2ZFD 0 JRNL AUTH M.AKABOSHI,H.HASHIMOTO,H.ISHIDA,S.SAIJO,N.KOIZUMI,M.SATO, JRNL AUTH 2 T.SHIMIZU JRNL TITL THE CRYSTAL STRUCTURE OF PLANT-SPECIFIC CALCIUM-BINDING JRNL TITL 2 PROTEIN ATCBL2 IN COMPLEX WITH THE REGULATORY DOMAIN OF JRNL TITL 3 ATCIPK14 JRNL REF J.MOL.BIOL. V. 377 246 2008 JRNL REFN ISSN 0022-2836 JRNL PMID 18237745 JRNL DOI 10.1016/J.JMB.2008.01.006 REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 3 NUMBER OF REFLECTIONS : 80720 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4271 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.23 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5593 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.78 REMARK 3 BIN R VALUE (WORKING SET) : 0.2010 REMARK 3 BIN FREE R VALUE SET COUNT : 294 REMARK 3 BIN FREE R VALUE : 0.2140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2387 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 236 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 7.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.07000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : -0.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.18000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.043 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.043 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.024 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.128 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2452 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1666 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3307 ; 1.181 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4063 ; 0.856 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 300 ; 5.845 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 119 ;31.316 ;24.622 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 448 ;10.736 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;16.133 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 376 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2711 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 504 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 529 ; 0.233 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1703 ; 0.181 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1235 ; 0.179 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1203 ; 0.083 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 159 ; 0.122 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 22 ; 0.090 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 7 ; 0.310 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 30 ; 0.274 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 23 ; 0.125 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 3 ; 0.079 ; 0.200 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1557 ; 0.800 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 606 ; 0.174 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2410 ; 1.180 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1021 ; 1.887 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 896 ; 2.795 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 6 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 221 REMARK 3 RESIDUE RANGE : A 234 A 385 REMARK 3 RESIDUE RANGE : B 2 B 2 REMARK 3 RESIDUE RANGE : A 227 A 233 REMARK 3 RESIDUE RANGE : B 308 B 426 REMARK 3 RESIDUE RANGE : A 32 A 214 REMARK 3 ORIGIN FOR THE GROUP (A): 31.1778 8.5398 21.8775 REMARK 3 T TENSOR REMARK 3 T11: -0.0122 T22: -0.0107 REMARK 3 T33: -0.0114 T12: -0.0071 REMARK 3 T13: -0.0015 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 0.2273 L22: 0.1506 REMARK 3 L33: 0.1646 L12: -0.0040 REMARK 3 L13: -0.0399 L23: 0.0402 REMARK 3 S TENSOR REMARK 3 S11: 0.0146 S12: -0.0314 S13: 0.0158 REMARK 3 S21: 0.0317 S22: 0.0006 S23: -0.0159 REMARK 3 S31: -0.0151 S32: 0.0219 S33: -0.0152 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2ZFD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1000027901. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796, 0.9798, 0.9645 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 85565 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.43100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 22.74050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLN A 3 REMARK 465 CYS A 4 REMARK 465 VAL A 5 REMARK 465 ASP A 6 REMARK 465 GLY A 7 REMARK 465 ILE A 8 REMARK 465 LYS A 9 REMARK 465 HIS A 10 REMARK 465 LEU A 11 REMARK 465 CYS A 12 REMARK 465 THR A 13 REMARK 465 SER A 14 REMARK 465 VAL A 15 REMARK 465 LEU A 16 REMARK 465 GLY A 17 REMARK 465 CYS A 18 REMARK 465 PHE A 19 REMARK 465 ASP A 20 REMARK 465 LEU A 21 REMARK 465 ASP A 22 REMARK 465 LEU A 23 REMARK 465 TYR A 24 REMARK 465 LYS A 25 REMARK 465 GLN A 26 REMARK 465 SER A 27 REMARK 465 GLY A 28 REMARK 465 GLY A 29 REMARK 465 LEU A 30 REMARK 465 GLY A 31 REMARK 465 PRO A 215 REMARK 465 SER A 216 REMARK 465 PHE A 217 REMARK 465 VAL A 218 REMARK 465 PHE A 219 REMARK 465 HIS A 220 REMARK 465 SER A 221 REMARK 465 GLN A 222 REMARK 465 VAL A 223 REMARK 465 GLU A 224 REMARK 465 ASP A 225 REMARK 465 THR A 226 REMARK 465 MET B 305 REMARK 465 GLY B 306 REMARK 465 ALA B 307 REMARK 465 ALA B 407 REMARK 465 SER B 408 REMARK 465 GLY B 409 REMARK 465 GLU B 427 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 32 CG OD1 OD2 REMARK 470 GLU A 34 CG CD OE1 OE2 REMARK 470 LEU A 35 CG CD1 CD2 REMARK 470 ARG A 38 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 208 CG CD CE NZ REMARK 470 ASP A 209 CG OD1 OD2 REMARK 470 PHE A 214 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG B 308 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 404 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 410 CG CD NE CZ NH1 NH2 REMARK 470 HIS B 426 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 61 -57.96 -121.75 REMARK 500 PHE A 138 153.13 64.13 REMARK 500 PHE B 322 46.36 -105.70 REMARK 500 THR B 416 -57.92 -121.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 227 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 58 O REMARK 620 2 ILE A 62 O 79.1 REMARK 620 3 ASP A 64 OD2 108.1 76.2 REMARK 620 4 LEU A 66 O 85.4 146.0 80.3 REMARK 620 5 GLU A 71 OE1 93.3 133.3 147.4 77.2 REMARK 620 6 GLU A 71 OE2 82.5 80.7 152.0 127.2 52.6 REMARK 620 7 HOH A 267 O 173.4 101.5 78.3 97.3 81.5 91.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 231 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 80 O REMARK 620 2 GLU A 83 OE2 93.5 REMARK 620 3 HOH A 258 O 86.1 171.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 232 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 92 OD1 REMARK 620 2 ASP A 92 OD2 51.1 REMARK 620 3 GLN A 135 OE1 124.4 73.5 REMARK 620 4 HOH A 346 O 78.2 129.2 156.8 REMARK 620 5 HOH A 347 O 79.0 86.8 95.1 83.3 REMARK 620 6 HOH A 381 O 148.9 142.2 75.4 81.9 75.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 228 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 95 OD1 REMARK 620 2 LYS A 97 O 74.0 REMARK 620 3 ASN A 99 OD1 90.2 72.7 REMARK 620 4 ILE A 101 O 80.5 141.3 78.7 REMARK 620 5 GLU A 106 OE1 107.5 130.9 153.1 84.3 REMARK 620 6 GLU A 106 OE2 93.7 78.9 149.1 132.2 52.0 REMARK 620 7 HOH A 324 O 173.4 100.6 84.5 102.1 78.9 88.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 230 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 132 OD1 REMARK 620 2 GLN A 136 OE1 81.8 REMARK 620 3 GLY A 137 O 90.7 80.5 REMARK 620 4 PHE A 138 O 81.4 144.8 69.1 REMARK 620 5 GLU A 140 OE1 165.2 83.6 84.7 109.8 REMARK 620 6 GLU A 143 OE1 107.1 138.0 138.4 76.7 85.4 REMARK 620 7 GLU A 143 OE2 91.6 88.4 168.2 122.7 90.2 51.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 229 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 176 OD1 REMARK 620 2 LYS A 178 O 75.0 REMARK 620 3 ASP A 180 OD1 86.3 79.3 REMARK 620 4 LYS A 182 O 83.3 150.6 79.7 REMARK 620 5 GLU A 187 OE1 116.3 130.2 145.1 77.3 REMARK 620 6 GLU A 187 OE2 92.0 79.8 158.7 121.2 52.8 REMARK 620 7 HOH A 325 O 163.2 91.8 81.0 105.0 80.1 95.9 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 227 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 228 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 229 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 230 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 231 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 232 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 233 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY B 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1UHN RELATED DB: PDB REMARK 900 UNCOMPLEXED FORM DBREF 2ZFD A 1 226 UNP Q8LAS7 CNBL2_ARATH 1 226 DBREF 2ZFD B 305 427 UNP Q9LZW4 Q9LZW4_ARATH 305 427 SEQRES 1 A 226 MET SER GLN CYS VAL ASP GLY ILE LYS HIS LEU CYS THR SEQRES 2 A 226 SER VAL LEU GLY CYS PHE ASP LEU ASP LEU TYR LYS GLN SEQRES 3 A 226 SER GLY GLY LEU GLY ASP PRO GLU LEU LEU ALA ARG ASP SEQRES 4 A 226 THR VAL PHE SER VAL SER GLU ILE GLU ALA LEU TYR GLU SEQRES 5 A 226 LEU PHE LYS LYS ILE SER SER ALA VAL ILE ASP ASP GLY SEQRES 6 A 226 LEU ILE ASN LYS GLU GLU PHE GLN LEU ALA LEU PHE LYS SEQRES 7 A 226 THR ASN LYS LYS GLU SER LEU PHE ALA ASP ARG VAL PHE SEQRES 8 A 226 ASP LEU PHE ASP THR LYS HIS ASN GLY ILE LEU GLY PHE SEQRES 9 A 226 GLU GLU PHE ALA ARG ALA LEU SER VAL PHE HIS PRO ASN SEQRES 10 A 226 ALA PRO ILE ASP ASP LYS ILE HIS PHE SER PHE GLN LEU SEQRES 11 A 226 TYR ASP LEU LYS GLN GLN GLY PHE ILE GLU ARG GLN GLU SEQRES 12 A 226 VAL LYS GLN MET VAL VAL ALA THR LEU ALA GLU SER GLY SEQRES 13 A 226 MET ASN LEU LYS ASP THR VAL ILE GLU ASP ILE ILE ASP SEQRES 14 A 226 LYS THR PHE GLU GLU ALA ASP THR LYS HIS ASP GLY LYS SEQRES 15 A 226 ILE ASP LYS GLU GLU TRP ARG SER LEU VAL LEU ARG HIS SEQRES 16 A 226 PRO SER LEU LEU LYS ASN MET THR LEU GLN TYR LEU LYS SEQRES 17 A 226 ASP ILE THR THR THR PHE PRO SER PHE VAL PHE HIS SER SEQRES 18 A 226 GLN VAL GLU ASP THR SEQRES 1 B 123 MET GLY ALA ARG ARG MET ASN ALA PHE ASP ILE ILE SER SEQRES 2 B 123 GLY SER PRO GLY PHE ASN LEU SER GLY LEU PHE GLY ASP SEQRES 3 B 123 ALA ARG LYS TYR ASP ARG VAL GLU ARG PHE VAL SER ALA SEQRES 4 B 123 TRP THR ALA GLU ARG VAL VAL GLU ARG LEU GLU GLU ILE SEQRES 5 B 123 VAL SER ALA GLU ASN LEU THR VAL ALA LYS LYS GLU THR SEQRES 6 B 123 TRP GLY MET LYS ILE GLU GLY GLN LYS GLY ASN PHE ALA SEQRES 7 B 123 MET VAL VAL GLU ILE ASN GLN LEU THR ASP GLU LEU VAL SEQRES 8 B 123 MET ILE GLU VAL ARG LYS ARG GLN ARG ALA ALA ALA SER SEQRES 9 B 123 GLY ARG ASP LEU TRP THR ASP THR LEU ARG PRO PHE PHE SEQRES 10 B 123 VAL GLU LEU VAL HIS GLU HET CA A 227 1 HET CA A 228 1 HET CA A 229 1 HET CA A 230 1 HET CA A 231 1 HET CA A 232 1 HET ACY A 233 4 HET ACY B 2 4 HETNAM CA CALCIUM ION HETNAM ACY ACETIC ACID FORMUL 3 CA 6(CA 2+) FORMUL 9 ACY 2(C2 H4 O2) FORMUL 11 HOH *236(H2 O) HELIX 1 1 PRO A 33 THR A 40 1 8 HELIX 2 2 SER A 43 SER A 59 1 17 HELIX 3 3 ASN A 68 LYS A 78 1 11 HELIX 4 4 SER A 84 ASP A 95 1 12 HELIX 5 5 GLY A 103 PHE A 114 1 12 HELIX 6 6 PRO A 119 ASP A 132 1 14 HELIX 7 7 ARG A 141 SER A 155 1 15 HELIX 8 8 LYS A 160 ASP A 176 1 17 HELIX 9 9 ASP A 184 HIS A 195 1 12 HELIX 10 10 PRO A 196 THR A 203 5 8 HELIX 11 11 LEU A 204 LYS A 208 5 5 HELIX 12 12 ASP A 209 PHE A 214 1 6 HELIX 13 13 ASN B 311 GLY B 318 1 8 HELIX 14 14 LEU B 324 ARG B 332 5 9 HELIX 15 15 THR B 345 GLU B 360 1 16 HELIX 16 16 GLN B 377 GLY B 379 5 3 HELIX 17 17 ASP B 411 THR B 416 1 6 HELIX 18 18 THR B 416 LEU B 424 1 9 SHEET 1 A 2 ILE A 139 GLU A 140 0 SHEET 2 A 2 LYS A 182 ILE A 183 -1 O ILE A 183 N ILE A 139 SHEET 1 B 5 GLU B 338 SER B 342 0 SHEET 2 B 5 VAL B 395 GLN B 403 -1 O VAL B 395 N SER B 342 SHEET 3 B 5 PHE B 381 GLN B 389 -1 N ASN B 388 O MET B 396 SHEET 4 B 5 GLY B 371 GLY B 376 -1 N MET B 372 O VAL B 385 SHEET 5 B 5 THR B 363 GLU B 368 -1 N GLU B 368 O GLY B 371 LINK O SER A 58 CA CA A 227 1555 1555 2.28 LINK O ILE A 62 CA CA A 227 1555 1555 2.43 LINK OD2 ASP A 64 CA CA A 227 1555 1555 2.40 LINK O LEU A 66 CA CA A 227 1555 1555 2.31 LINK OE1 GLU A 71 CA CA A 227 1555 1555 2.44 LINK OE2 GLU A 71 CA CA A 227 1555 1555 2.51 LINK O ASN A 80 CA CA A 231 1555 1555 2.32 LINK OE2 GLU A 83 CA CA A 231 1555 1555 2.31 LINK OD1 ASP A 92 CA CA A 232 1555 1555 2.55 LINK OD2 ASP A 92 CA CA A 232 1555 1555 2.42 LINK OD1 ASP A 95 CA CA A 228 1555 1555 2.28 LINK O LYS A 97 CA CA A 228 1555 1555 2.48 LINK OD1 ASN A 99 CA CA A 228 1555 1555 2.36 LINK O ILE A 101 CA CA A 228 1555 1555 2.30 LINK OE1 GLU A 106 CA CA A 228 1555 1555 2.51 LINK OE2 GLU A 106 CA CA A 228 1555 1555 2.47 LINK OD1 ASP A 132 CA CA A 230 1555 1555 2.27 LINK OE1 GLN A 135 CA CA A 232 1555 1555 2.41 LINK OE1 GLN A 136 CA CA A 230 1555 1555 2.40 LINK O GLY A 137 CA CA A 230 1555 1555 2.45 LINK O PHE A 138 CA CA A 230 1555 1555 2.38 LINK OE1 GLU A 140 CA CA A 230 1555 1555 2.38 LINK OE1 GLU A 143 CA CA A 230 1555 1555 2.53 LINK OE2 GLU A 143 CA CA A 230 1555 1555 2.50 LINK OD1 ASP A 176 CA CA A 229 1555 1555 2.26 LINK O LYS A 178 CA CA A 229 1555 1555 2.40 LINK OD1 ASP A 180 CA CA A 229 1555 1555 2.37 LINK O LYS A 182 CA CA A 229 1555 1555 2.32 LINK OE1 GLU A 187 CA CA A 229 1555 1555 2.47 LINK OE2 GLU A 187 CA CA A 229 1555 1555 2.44 LINK CA CA A 227 O HOH A 267 1555 1555 2.36 LINK CA CA A 228 O HOH A 324 1555 1555 2.34 LINK CA CA A 229 O HOH A 325 1555 1555 2.35 LINK CA CA A 231 O HOH A 258 1555 1555 2.35 LINK CA CA A 232 O HOH A 346 1555 1555 2.43 LINK CA CA A 232 O HOH A 347 1555 1555 2.44 LINK CA CA A 232 O HOH A 381 1555 1555 2.42 SITE 1 AC1 6 SER A 58 ILE A 62 ASP A 64 LEU A 66 SITE 2 AC1 6 GLU A 71 HOH A 267 SITE 1 AC2 6 ASP A 95 LYS A 97 ASN A 99 ILE A 101 SITE 2 AC2 6 GLU A 106 HOH A 324 SITE 1 AC3 6 ASP A 176 LYS A 178 ASP A 180 LYS A 182 SITE 2 AC3 6 GLU A 187 HOH A 325 SITE 1 AC4 6 ASP A 132 GLN A 136 GLY A 137 PHE A 138 SITE 2 AC4 6 GLU A 140 GLU A 143 SITE 1 AC5 6 ASN A 80 GLU A 83 HOH A 258 HOH B 31 SITE 2 AC5 6 HOH B 35 LEU B 362 SITE 1 AC6 6 ASP A 92 GLN A 135 HOH A 346 HOH A 347 SITE 2 AC6 6 HOH A 381 GLU B 368 SITE 1 AC7 5 ASN A 158 THR A 177 LYS A 178 HOH A 274 SITE 2 AC7 5 HOH A 307 SITE 1 AC8 3 HOH B 56 TRP B 344 ARG B 348 CRYST1 34.092 45.481 92.390 90.00 92.64 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029332 0.000000 0.001353 0.00000 SCALE2 0.000000 0.021987 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010835 0.00000