data_2ZHE # _entry.id 2ZHE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2ZHE pdb_00002zhe 10.2210/pdb2zhe/pdb RCSB RCSB027974 ? ? WWPDB D_1000027974 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3BIU 'Thrombin inhibitor complex' unspecified PDB 3BIV 'Thrombin inhibitor complex' unspecified PDB 2ZDA 'Thrombin inhibitor complex' unspecified PDB 2ZFQ 'Thrombin inhibitor complex' unspecified PDB 2ZG0 'Thrombin inhibitor complex' unspecified PDB 2ZFT 'Bovine trypsin inhibitor complex' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2ZHE _pdbx_database_status.recvd_initial_deposition_date 2008-02-04 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Brandt, T.' 1 'Baum, B.' 2 'Heine, A.' 3 'Klebe, G.' 4 # _citation.id primary _citation.title 'Exploring thrombin S3 pocket' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Brandt, T.' 1 ? primary 'Baum, B.' 2 ? primary 'Hangauer, D.' 3 ? primary 'Heine, A.' 4 ? primary 'Klebe, G.' 5 ? # _cell.entry_id 2ZHE _cell.length_a 70.4 _cell.length_b 71.2 _cell.length_c 72.4 _cell.angle_alpha 90.0 _cell.angle_beta 100.4 _cell.angle_gamma 90.0 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2ZHE _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Thrombin light chain' 4096.534 1 3.4.21.5 ? ? ? 2 polymer nat 'Thrombin heavy chain' 29780.219 1 3.4.21.5 ? ? ? 3 polymer syn 'Hirudin variant-2' 1534.554 1 ? ? 'Residues 53-64' ? 4 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 5 non-polymer syn 'N-cyclooctylglycyl-N-(4-carbamimidoylbenzyl)-L-prolinamide' 413.556 1 ? ? ? ? 6 water nat water 18.015 137 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR L ? 2 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; H ? 3 'polypeptide(L)' no yes 'NGDFEEIPEE(TYS)L' NGDFEEIPEEYL I ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 PHE n 1 3 GLY n 1 4 SER n 1 5 GLY n 1 6 GLU n 1 7 ALA n 1 8 ASP n 1 9 CYS n 1 10 GLY n 1 11 LEU n 1 12 ARG n 1 13 PRO n 1 14 LEU n 1 15 PHE n 1 16 GLU n 1 17 LYS n 1 18 LYS n 1 19 SER n 1 20 LEU n 1 21 GLU n 1 22 ASP n 1 23 LYS n 1 24 THR n 1 25 GLU n 1 26 ARG n 1 27 GLU n 1 28 LEU n 1 29 LEU n 1 30 GLU n 1 31 SER n 1 32 TYR n 1 33 ILE n 1 34 ASP n 1 35 GLY n 1 36 ARG n 2 1 ILE n 2 2 VAL n 2 3 GLU n 2 4 GLY n 2 5 SER n 2 6 ASP n 2 7 ALA n 2 8 GLU n 2 9 ILE n 2 10 GLY n 2 11 MET n 2 12 SER n 2 13 PRO n 2 14 TRP n 2 15 GLN n 2 16 VAL n 2 17 MET n 2 18 LEU n 2 19 PHE n 2 20 ARG n 2 21 LYS n 2 22 SER n 2 23 PRO n 2 24 GLN n 2 25 GLU n 2 26 LEU n 2 27 LEU n 2 28 CYS n 2 29 GLY n 2 30 ALA n 2 31 SER n 2 32 LEU n 2 33 ILE n 2 34 SER n 2 35 ASP n 2 36 ARG n 2 37 TRP n 2 38 VAL n 2 39 LEU n 2 40 THR n 2 41 ALA n 2 42 ALA n 2 43 HIS n 2 44 CYS n 2 45 LEU n 2 46 LEU n 2 47 TYR n 2 48 PRO n 2 49 PRO n 2 50 TRP n 2 51 ASP n 2 52 LYS n 2 53 ASN n 2 54 PHE n 2 55 THR n 2 56 GLU n 2 57 ASN n 2 58 ASP n 2 59 LEU n 2 60 LEU n 2 61 VAL n 2 62 ARG n 2 63 ILE n 2 64 GLY n 2 65 LYS n 2 66 HIS n 2 67 SER n 2 68 ARG n 2 69 THR n 2 70 ARG n 2 71 TYR n 2 72 GLU n 2 73 ARG n 2 74 ASN n 2 75 ILE n 2 76 GLU n 2 77 LYS n 2 78 ILE n 2 79 SER n 2 80 MET n 2 81 LEU n 2 82 GLU n 2 83 LYS n 2 84 ILE n 2 85 TYR n 2 86 ILE n 2 87 HIS n 2 88 PRO n 2 89 ARG n 2 90 TYR n 2 91 ASN n 2 92 TRP n 2 93 ARG n 2 94 GLU n 2 95 ASN n 2 96 LEU n 2 97 ASP n 2 98 ARG n 2 99 ASP n 2 100 ILE n 2 101 ALA n 2 102 LEU n 2 103 MET n 2 104 LYS n 2 105 LEU n 2 106 LYS n 2 107 LYS n 2 108 PRO n 2 109 VAL n 2 110 ALA n 2 111 PHE n 2 112 SER n 2 113 ASP n 2 114 TYR n 2 115 ILE n 2 116 HIS n 2 117 PRO n 2 118 VAL n 2 119 CYS n 2 120 LEU n 2 121 PRO n 2 122 ASP n 2 123 ARG n 2 124 GLU n 2 125 THR n 2 126 ALA n 2 127 ALA n 2 128 SER n 2 129 LEU n 2 130 LEU n 2 131 GLN n 2 132 ALA n 2 133 GLY n 2 134 TYR n 2 135 LYS n 2 136 GLY n 2 137 ARG n 2 138 VAL n 2 139 THR n 2 140 GLY n 2 141 TRP n 2 142 GLY n 2 143 ASN n 2 144 LEU n 2 145 LYS n 2 146 GLU n 2 147 THR n 2 148 TRP n 2 149 THR n 2 150 ALA n 2 151 ASN n 2 152 VAL n 2 153 GLY n 2 154 LYS n 2 155 GLY n 2 156 GLN n 2 157 PRO n 2 158 SER n 2 159 VAL n 2 160 LEU n 2 161 GLN n 2 162 VAL n 2 163 VAL n 2 164 ASN n 2 165 LEU n 2 166 PRO n 2 167 ILE n 2 168 VAL n 2 169 GLU n 2 170 ARG n 2 171 PRO n 2 172 VAL n 2 173 CYS n 2 174 LYS n 2 175 ASP n 2 176 SER n 2 177 THR n 2 178 ARG n 2 179 ILE n 2 180 ARG n 2 181 ILE n 2 182 THR n 2 183 ASP n 2 184 ASN n 2 185 MET n 2 186 PHE n 2 187 CYS n 2 188 ALA n 2 189 GLY n 2 190 TYR n 2 191 LYS n 2 192 PRO n 2 193 ASP n 2 194 GLU n 2 195 GLY n 2 196 LYS n 2 197 ARG n 2 198 GLY n 2 199 ASP n 2 200 ALA n 2 201 CYS n 2 202 GLU n 2 203 GLY n 2 204 ASP n 2 205 SER n 2 206 GLY n 2 207 GLY n 2 208 PRO n 2 209 PHE n 2 210 VAL n 2 211 MET n 2 212 LYS n 2 213 SER n 2 214 PRO n 2 215 PHE n 2 216 ASN n 2 217 ASN n 2 218 ARG n 2 219 TRP n 2 220 TYR n 2 221 GLN n 2 222 MET n 2 223 GLY n 2 224 ILE n 2 225 VAL n 2 226 SER n 2 227 TRP n 2 228 GLY n 2 229 GLU n 2 230 GLY n 2 231 CYS n 2 232 ASP n 2 233 ARG n 2 234 ASP n 2 235 GLY n 2 236 LYS n 2 237 TYR n 2 238 GLY n 2 239 PHE n 2 240 TYR n 2 241 THR n 2 242 HIS n 2 243 VAL n 2 244 PHE n 2 245 ARG n 2 246 LEU n 2 247 LYS n 2 248 LYS n 2 249 TRP n 2 250 ILE n 2 251 GLN n 2 252 LYS n 2 253 VAL n 2 254 ILE n 2 255 ASP n 2 256 GLN n 2 257 PHE n 2 258 GLY n 2 259 GLU n 3 1 ASN n 3 2 GLY n 3 3 ASP n 3 4 PHE n 3 5 GLU n 3 6 GLU n 3 7 ILE n 3 8 PRO n 3 9 GLU n 3 10 GLU n 3 11 TYS n 3 12 LEU n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? Human 'Homo sapiens' 9606 ? ? ? Plasma ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? Human 'Homo sapiens' 9606 ? ? ? Plasma ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Hirudo medicinalis' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 6421 _pdbx_entity_src_syn.details 'Synthetic fragment of hirudin from Hirudo Medicinalis' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP THRB_HUMAN P00734 1 TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR 328 ? 2 UNP THRB_HUMAN P00734 2 ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; 364 ? 3 UNP ITH3_HIRME P09945 3 NGDFEEIPEEYL 60 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2ZHE L 1 H 36 N P00734 328 ? 363 ? 1 14 2 2 2ZHE H 1 ? 259 ? P00734 364 ? 622 ? 16 247 3 3 2ZHE I 1 ? 12 ? P09945 60 ? 71 ? 53 64 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 13U non-polymer . 'N-cyclooctylglycyl-N-(4-carbamimidoylbenzyl)-L-prolinamide' '(2S)-N-[(4-carbamimidoylphenyl)methyl]-1-[2-(cyclooctylamino)ethanoyl]pyrrolidine-2-carboxamide' 'C23 H35 N5 O2' 413.556 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 TYS 'L-peptide linking' n O-SULFO-L-TYROSINE ? 'C9 H11 N O6 S' 261.252 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2ZHE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.27 _exptl_crystal.density_percent_sol 51.19 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'Phosphate buffer, sodium chloride, PEG8000, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 113 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2008-01-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH3R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 2ZHE _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.10 _reflns.d_resolution_low 50 _reflns.number_all 18826 _reflns.number_obs 18826 _reflns.percent_possible_obs 91.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.097 _reflns.pdbx_netI_over_sigmaI 8.4 _reflns.B_iso_Wilson_estimate 23.7 _reflns.pdbx_redundancy 1.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.14 _reflns_shell.percent_possible_all 87.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.343 _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.pdbx_redundancy 1.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 893 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2ZHE _refine.ls_number_reflns_obs 11905 _refine.ls_number_reflns_all 16943 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 82.9 _refine.ls_R_factor_obs 0.206 _refine.ls_R_factor_all 0.210 _refine.ls_R_factor_R_work 0.179 _refine.ls_R_factor_R_free 0.298 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 818 _refine.ls_number_parameters 9989 _refine.ls_number_restraints 9825 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details ? _refine.pdbx_starting_model 'PDB entry 1H8D' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2ZHE _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 0 _refine_analyze.occupancy_sum_hydrogen 2279.00 _refine_analyze.occupancy_sum_non_hydrogen 2496.50 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2325 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 137 _refine_hist.number_atoms_total 2494 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.020 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0259 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.024 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.035 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.008 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.033 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.000 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 2ZHE _pdbx_refine.R_factor_all_no_cutoff 0.2098 _pdbx_refine.R_factor_obs_no_cutoff 0.2061 _pdbx_refine.free_R_factor_no_cutoff 0.2983 _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 4.8 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 818 _pdbx_refine.R_factor_all_4sig_cutoff 0.1791 _pdbx_refine.R_factor_obs_4sig_cutoff 0.1751 _pdbx_refine.free_R_factor_4sig_cutoff 0.248 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 4.7 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 560 _pdbx_refine.number_reflns_obs_4sig_cutoff 11905 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 2ZHE _struct.title 'Exploring thrombin S3 pocket' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2ZHE _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text ;Blood coagulation, Hydrolase inhibitors, Acute phase, Cleavage on pair of basic residues, Disease mutation, Gamma-carboxyglutamic acid, Glycoprotein, Kringle, Protease, Secreted, Serine protease, Protease inhibitor, Serine protease inhibitor, Sulfation, HYDROLASE-HYDROLASE INHIBITOR COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 15 ? SER A 19 ? PHE L 7 SER L 11 5 ? 5 HELX_P HELX_P2 2 THR A 24 B TYR A 32 J THR L 14 TYR L 14 1 ? 9 HELX_P HELX_P3 3 ALA B 41 ? CYS B 44 ? ALA H 55 CYS H 58 5 ? 4 HELX_P HELX_P4 4 PRO B 48 B ASP B 51 E PRO H 60 ASP H 60 5 ? 4 HELX_P HELX_P5 5 THR B 55 I ASN B 57 ? THR H 60 ASN H 62 5 ? 3 HELX_P HELX_P6 6 ASP B 122 ? LEU B 130 ? ASP H 125 LEU H 130 1 ? 9 HELX_P HELX_P7 7 GLU B 169 ? SER B 176 ? GLU H 164 SER H 171 1 ? 8 HELX_P HELX_P8 8 VAL B 243 ? PHE B 257 ? VAL H 231 PHE H 245 1 ? 15 HELX_P HELX_P9 9 PRO C 8 ? LEU C 12 ? PRO I 60 LEU I 64 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 B CYS 119 SG ? ? L CYS 1 H CYS 122 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf2 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 44 SG ? ? H CYS 42 H CYS 58 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf3 disulf ? ? B CYS 173 SG ? ? ? 1_555 B CYS 187 SG ? ? H CYS 168 H CYS 182 1_555 ? ? ? ? ? ? ? 2.021 ? ? disulf4 disulf ? ? B CYS 201 SG ? ? ? 1_555 B CYS 231 SG ? ? H CYS 191 H CYS 220 1_555 ? ? ? ? ? ? ? 2.035 ? ? covale1 covale both ? C GLU 10 C ? ? ? 1_555 C TYS 11 N ? ? I GLU 62 I TYS 63 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale2 covale both ? C TYS 11 C ? ? ? 1_555 C LEU 12 N ? ? I TYS 63 I LEU 64 1_555 ? ? ? ? ? ? ? 1.326 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 22 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code A _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 36 _struct_mon_prot_cis.auth_asym_id H _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 23 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 37 _struct_mon_prot_cis.pdbx_auth_asym_id_2 H _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.99 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 7 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER B 5 ? ASP B 6 ? SER H 20 ASP H 21 A 2 GLN B 161 ? VAL B 168 ? GLN H 156 VAL H 163 A 3 MET B 185 ? ALA B 188 ? MET H 180 ALA H 183 A 4 GLY B 238 ? HIS B 242 ? GLY H 226 HIS H 230 A 5 TRP B 219 ? TRP B 227 ? TRP H 207 TRP H 215 A 6 PRO B 208 ? LYS B 212 ? PRO H 198 LYS H 202 A 7 LYS B 135 ? GLY B 140 ? LYS H 135 GLY H 140 A 8 GLN B 161 ? VAL B 168 ? GLN H 156 VAL H 163 B 1 LYS B 77 ? SER B 79 ? LYS H 81 SER H 83 B 2 LEU B 59 ? ILE B 63 ? LEU H 64 ILE H 68 B 3 GLN B 15 ? ARG B 20 ? GLN H 30 ARG H 35 B 4 GLU B 25 ? LEU B 32 ? GLU H 39 LEU H 46 B 5 TRP B 37 ? THR B 40 ? TRP H 51 THR H 54 B 6 ALA B 101 ? LEU B 105 ? ALA H 104 LEU H 108 B 7 LEU B 81 ? ILE B 86 ? LEU H 85 ILE H 90 C 1 LEU B 46 ? TYR B 47 A LEU H 60 TYR H 60 C 2 LYS B 52 F ASN B 53 G LYS H 60 ASN H 60 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER B 5 ? N SER H 20 O VAL B 162 ? O VAL H 157 A 2 3 N VAL B 168 ? N VAL H 163 O CYS B 187 ? O CYS H 182 A 3 4 N PHE B 186 ? N PHE H 181 O TYR B 240 ? O TYR H 228 A 4 5 O PHE B 239 ? O PHE H 227 N TRP B 227 ? N TRP H 215 A 5 6 O TYR B 220 ? O TYR H 208 N MET B 211 ? N MET H 201 A 6 7 O VAL B 210 ? O VAL H 200 N ARG B 137 ? N ARG H 137 A 7 8 N VAL B 138 ? N VAL H 138 O VAL B 163 ? O VAL H 158 B 1 2 O SER B 79 ? O SER H 83 N VAL B 61 ? N VAL H 66 B 2 3 O LEU B 60 ? O LEU H 65 N PHE B 19 ? N PHE H 34 B 3 4 N LEU B 18 ? N LEU H 33 O LEU B 27 ? O LEU H 41 B 4 5 N SER B 31 ? N SER H 45 O LEU B 39 ? O LEU H 53 B 5 6 N VAL B 38 ? N VAL H 52 O MET B 103 ? O MET H 106 B 6 7 O LEU B 102 ? O LEU H 105 N TYR B 85 ? N TYR H 89 C 1 2 N TYR B 47 A N TYR H 60 O LYS B 52 F O LYS H 60 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software H NA 601 ? 5 'BINDING SITE FOR RESIDUE NA H 601' AC2 Software H NA 602 ? 6 'BINDING SITE FOR RESIDUE NA H 602' AC3 Software H 13U 501 ? 14 'BINDING SITE FOR RESIDUE 13U H 501' AC4 Software ? ? ? ? 12 'BINDING SITE FOR CHAIN I OF HIRUDIN VARIANT-2' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 LYS B 174 ? LYS H 169 . ? 1_555 ? 2 AC1 5 THR B 177 ? THR H 172 . ? 1_555 ? 3 AC1 5 PHE B 215 A PHE H 204 . ? 4_546 ? 4 AC1 5 HOH H . ? HOH H 1031 . ? 4_546 ? 5 AC1 5 HOH H . ? HOH H 1059 . ? 1_555 ? 6 AC2 6 ARG B 233 A ARG H 221 . ? 1_555 ? 7 AC2 6 LYS B 236 ? LYS H 224 . ? 1_555 ? 8 AC2 6 HOH H . ? HOH H 1048 . ? 1_555 ? 9 AC2 6 HOH H . ? HOH H 1055 . ? 1_555 ? 10 AC2 6 HOH H . ? HOH H 1083 . ? 1_555 ? 11 AC2 6 HOH H . ? HOH H 1092 . ? 1_555 ? 12 AC3 14 HIS B 43 ? HIS H 57 . ? 1_555 ? 13 AC3 14 TYR B 47 A TYR H 60 . ? 1_555 ? 14 AC3 14 TRP B 50 D TRP H 60 . ? 1_555 ? 15 AC3 14 GLU B 94 A GLU H 97 . ? 1_555 ? 16 AC3 14 ILE B 179 ? ILE H 174 . ? 1_555 ? 17 AC3 14 ASP B 199 ? ASP H 189 . ? 1_555 ? 18 AC3 14 ALA B 200 ? ALA H 190 . ? 1_555 ? 19 AC3 14 SER B 205 ? SER H 195 . ? 1_555 ? 20 AC3 14 SER B 226 ? SER H 214 . ? 1_555 ? 21 AC3 14 TRP B 227 ? TRP H 215 . ? 1_555 ? 22 AC3 14 GLY B 228 ? GLY H 216 . ? 1_555 ? 23 AC3 14 GLY B 230 ? GLY H 219 . ? 1_555 ? 24 AC3 14 GLY B 238 ? GLY H 226 . ? 1_555 ? 25 AC3 14 HOH H . ? HOH H 1004 . ? 1_555 ? 26 AC4 12 PHE B 19 ? PHE H 34 . ? 1_555 ? 27 AC4 12 LYS B 21 ? LYS H 36 . ? 1_555 ? 28 AC4 12 GLN B 24 ? GLN H 38 . ? 1_555 ? 29 AC4 12 LEU B 26 ? LEU H 40 . ? 1_555 ? 30 AC4 12 LEU B 60 ? LEU H 65 . ? 1_555 ? 31 AC4 12 ARG B 62 ? ARG H 67 . ? 1_555 ? 32 AC4 12 ARG B 68 ? ARG H 73 . ? 1_555 ? 33 AC4 12 THR B 69 ? THR H 74 . ? 1_555 ? 34 AC4 12 ARG B 70 ? ARG H 75 . ? 1_555 ? 35 AC4 12 TYR B 71 ? TYR H 76 . ? 1_555 ? 36 AC4 12 ILE B 78 ? ILE H 82 . ? 1_555 ? 37 AC4 12 HOH I . ? HOH I 1131 . ? 1_555 ? # _database_PDB_matrix.entry_id 2ZHE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 2ZHE _atom_sites.fract_transf_matrix[1][1] 0.014205 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002607 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014045 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014043 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 ? ? ? L H n A 1 2 PHE 2 1 ? ? ? L G n A 1 3 GLY 3 1 ? ? ? L F n A 1 4 SER 4 1 ? ? ? L E n A 1 5 GLY 5 1 ? ? ? L D n A 1 6 GLU 6 1 ? ? ? L C n A 1 7 ALA 7 1 1 ALA ALA L B n A 1 8 ASP 8 1 1 ASP ASP L A n A 1 9 CYS 9 1 1 CYS CYS L . n A 1 10 GLY 10 2 2 GLY GLY L . n A 1 11 LEU 11 3 3 LEU LEU L . n A 1 12 ARG 12 4 4 ARG ARG L . n A 1 13 PRO 13 5 5 PRO PRO L . n A 1 14 LEU 14 6 6 LEU LEU L . n A 1 15 PHE 15 7 7 PHE PHE L . n A 1 16 GLU 16 8 8 GLU GLU L . n A 1 17 LYS 17 9 9 LYS LYS L . n A 1 18 LYS 18 10 10 LYS LYS L . n A 1 19 SER 19 11 11 SER SER L . n A 1 20 LEU 20 12 12 LEU LEU L . n A 1 21 GLU 21 13 13 GLU GLU L . n A 1 22 ASP 22 14 14 ASP ASP L . n A 1 23 LYS 23 14 14 LYS LYS L A n A 1 24 THR 24 14 14 THR THR L B n A 1 25 GLU 25 14 14 GLU GLU L C n A 1 26 ARG 26 14 14 ARG ARG L D n A 1 27 GLU 27 14 14 GLU GLU L E n A 1 28 LEU 28 14 14 LEU LEU L F n A 1 29 LEU 29 14 14 LEU LEU L G n A 1 30 GLU 30 14 14 GLU GLU L H n A 1 31 SER 31 14 14 SER SER L I n A 1 32 TYR 32 14 14 TYR TYR L J n A 1 33 ILE 33 14 14 ILE ILE L K n A 1 34 ASP 34 14 ? ? ? L L n A 1 35 GLY 35 14 ? ? ? L M n A 1 36 ARG 36 14 ? ? ? L N n B 2 1 ILE 1 16 16 ILE ILE H . n B 2 2 VAL 2 17 17 VAL VAL H . n B 2 3 GLU 3 18 18 GLU GLU H . n B 2 4 GLY 4 19 19 GLY GLY H . n B 2 5 SER 5 20 20 SER SER H . n B 2 6 ASP 6 21 21 ASP ASP H . n B 2 7 ALA 7 22 22 ALA ALA H . n B 2 8 GLU 8 23 23 GLU GLU H . n B 2 9 ILE 9 24 24 ILE ILE H . n B 2 10 GLY 10 25 25 GLY GLY H . n B 2 11 MET 11 26 26 MET MET H . n B 2 12 SER 12 27 27 SER SER H . n B 2 13 PRO 13 28 28 PRO PRO H . n B 2 14 TRP 14 29 29 TRP TRP H . n B 2 15 GLN 15 30 30 GLN GLN H . n B 2 16 VAL 16 31 31 VAL VAL H . n B 2 17 MET 17 32 32 MET MET H . n B 2 18 LEU 18 33 33 LEU LEU H . n B 2 19 PHE 19 34 34 PHE PHE H . n B 2 20 ARG 20 35 35 ARG ARG H . n B 2 21 LYS 21 36 36 LYS LYS H . n B 2 22 SER 22 36 36 SER SER H A n B 2 23 PRO 23 37 37 PRO PRO H . n B 2 24 GLN 24 38 38 GLN GLN H . n B 2 25 GLU 25 39 39 GLU GLU H . n B 2 26 LEU 26 40 40 LEU LEU H . n B 2 27 LEU 27 41 41 LEU LEU H . n B 2 28 CYS 28 42 42 CYS CYS H . n B 2 29 GLY 29 43 43 GLY GLY H . n B 2 30 ALA 30 44 44 ALA ALA H . n B 2 31 SER 31 45 45 SER SER H . n B 2 32 LEU 32 46 46 LEU LEU H . n B 2 33 ILE 33 47 47 ILE ILE H . n B 2 34 SER 34 48 48 SER SER H . n B 2 35 ASP 35 49 49 ASP ASP H . n B 2 36 ARG 36 50 50 ARG ARG H . n B 2 37 TRP 37 51 51 TRP TRP H . n B 2 38 VAL 38 52 52 VAL VAL H . n B 2 39 LEU 39 53 53 LEU LEU H . n B 2 40 THR 40 54 54 THR THR H . n B 2 41 ALA 41 55 55 ALA ALA H . n B 2 42 ALA 42 56 56 ALA ALA H . n B 2 43 HIS 43 57 57 HIS HIS H . n B 2 44 CYS 44 58 58 CYS CYS H . n B 2 45 LEU 45 59 59 LEU LEU H . n B 2 46 LEU 46 60 60 LEU LEU H . n B 2 47 TYR 47 60 60 TYR TYR H A n B 2 48 PRO 48 60 60 PRO PRO H B n B 2 49 PRO 49 60 60 PRO PRO H C n B 2 50 TRP 50 60 60 TRP TRP H D n B 2 51 ASP 51 60 60 ASP ASP H E n B 2 52 LYS 52 60 60 LYS LYS H F n B 2 53 ASN 53 60 60 ASN ASN H G n B 2 54 PHE 54 60 60 PHE PHE H H n B 2 55 THR 55 60 60 THR THR H I n B 2 56 GLU 56 61 61 GLU GLU H . n B 2 57 ASN 57 62 62 ASN ASN H . n B 2 58 ASP 58 63 63 ASP ASP H . n B 2 59 LEU 59 64 64 LEU LEU H . n B 2 60 LEU 60 65 65 LEU LEU H . n B 2 61 VAL 61 66 66 VAL VAL H . n B 2 62 ARG 62 67 67 ARG ARG H . n B 2 63 ILE 63 68 68 ILE ILE H . n B 2 64 GLY 64 69 69 GLY GLY H . n B 2 65 LYS 65 70 70 LYS LYS H . n B 2 66 HIS 66 71 71 HIS HIS H . n B 2 67 SER 67 72 72 SER SER H . n B 2 68 ARG 68 73 73 ARG ARG H . n B 2 69 THR 69 74 74 THR THR H . n B 2 70 ARG 70 75 75 ARG ALA H . n B 2 71 TYR 71 76 76 TYR TYR H . n B 2 72 GLU 72 77 77 GLU GLU H . n B 2 73 ARG 73 77 77 ARG ARG H A n B 2 74 ASN 74 78 78 ASN ASN H . n B 2 75 ILE 75 79 79 ILE ILE H . n B 2 76 GLU 76 80 80 GLU GLU H . n B 2 77 LYS 77 81 81 LYS LYS H . n B 2 78 ILE 78 82 82 ILE ILE H . n B 2 79 SER 79 83 83 SER SER H . n B 2 80 MET 80 84 84 MET MET H . n B 2 81 LEU 81 85 85 LEU LEU H . n B 2 82 GLU 82 86 86 GLU GLU H . n B 2 83 LYS 83 87 87 LYS LYS H . n B 2 84 ILE 84 88 88 ILE ILE H . n B 2 85 TYR 85 89 89 TYR TYR H . n B 2 86 ILE 86 90 90 ILE ILE H . n B 2 87 HIS 87 91 91 HIS HIS H . n B 2 88 PRO 88 92 92 PRO PRO H . n B 2 89 ARG 89 93 93 ARG ARG H . n B 2 90 TYR 90 94 94 TYR TYR H . n B 2 91 ASN 91 95 95 ASN ASN H . n B 2 92 TRP 92 96 96 TRP TRP H . n B 2 93 ARG 93 97 97 ARG ARG H . n B 2 94 GLU 94 97 97 GLU GLU H A n B 2 95 ASN 95 98 98 ASN ASN H . n B 2 96 LEU 96 99 99 LEU LEU H . n B 2 97 ASP 97 100 100 ASP ASP H . n B 2 98 ARG 98 101 101 ARG ARG H . n B 2 99 ASP 99 102 102 ASP ASP H . n B 2 100 ILE 100 103 103 ILE ILE H . n B 2 101 ALA 101 104 104 ALA ALA H . n B 2 102 LEU 102 105 105 LEU LEU H . n B 2 103 MET 103 106 106 MET MET H . n B 2 104 LYS 104 107 107 LYS LYS H . n B 2 105 LEU 105 108 108 LEU LEU H . n B 2 106 LYS 106 109 109 LYS LYS H . n B 2 107 LYS 107 110 110 LYS LYS H . n B 2 108 PRO 108 111 111 PRO PRO H . n B 2 109 VAL 109 112 112 VAL VAL H . n B 2 110 ALA 110 113 113 ALA ALA H . n B 2 111 PHE 111 114 114 PHE PHE H . n B 2 112 SER 112 115 115 SER SER H . n B 2 113 ASP 113 116 116 ASP ASP H . n B 2 114 TYR 114 117 117 TYR TYR H . n B 2 115 ILE 115 118 118 ILE ILE H . n B 2 116 HIS 116 119 119 HIS HIS H . n B 2 117 PRO 117 120 120 PRO PRO H . n B 2 118 VAL 118 121 121 VAL VAL H . n B 2 119 CYS 119 122 122 CYS CYS H . n B 2 120 LEU 120 123 123 LEU LEU H . n B 2 121 PRO 121 124 124 PRO PRO H . n B 2 122 ASP 122 125 125 ASP ASP H . n B 2 123 ARG 123 126 126 ARG ARG H . n B 2 124 GLU 124 127 127 GLU GLU H . n B 2 125 THR 125 128 128 THR THR H . n B 2 126 ALA 126 129 129 ALA ALA H . n B 2 127 ALA 127 129 129 ALA ALA H A n B 2 128 SER 128 129 129 SER SER H B n B 2 129 LEU 129 129 129 LEU LEU H C n B 2 130 LEU 130 130 130 LEU LEU H . n B 2 131 GLN 131 131 131 GLN GLN H . n B 2 132 ALA 132 132 132 ALA ALA H . n B 2 133 GLY 133 133 133 GLY GLY H . n B 2 134 TYR 134 134 134 TYR TYR H . n B 2 135 LYS 135 135 135 LYS LYS H . n B 2 136 GLY 136 136 136 GLY GLY H . n B 2 137 ARG 137 137 137 ARG ARG H . n B 2 138 VAL 138 138 138 VAL VAL H . n B 2 139 THR 139 139 139 THR THR H . n B 2 140 GLY 140 140 140 GLY GLY H . n B 2 141 TRP 141 141 141 TRP TRP H . n B 2 142 GLY 142 142 142 GLY GLY H . n B 2 143 ASN 143 143 143 ASN ASN H . n B 2 144 LEU 144 144 144 LEU LEU H . n B 2 145 LYS 145 145 145 LYS LYS H . n B 2 146 GLU 146 146 146 GLU GLU H . n B 2 147 THR 147 146 ? ? ? H A n B 2 148 TRP 148 146 ? ? ? H B n B 2 149 THR 149 146 ? ? ? H C n B 2 150 ALA 150 146 ? ? ? H D n B 2 151 ASN 151 146 ? ? ? H E n B 2 152 VAL 152 146 ? ? ? H F n B 2 153 GLY 153 146 ? ? ? H G n B 2 154 LYS 154 146 ? ? ? H H n B 2 155 GLY 155 150 150 GLY GLY H . n B 2 156 GLN 156 151 151 GLN GLN H . n B 2 157 PRO 157 152 152 PRO PRO H . n B 2 158 SER 158 153 153 SER SER H . n B 2 159 VAL 159 154 154 VAL VAL H . n B 2 160 LEU 160 155 155 LEU LEU H . n B 2 161 GLN 161 156 156 GLN GLN H . n B 2 162 VAL 162 157 157 VAL VAL H . n B 2 163 VAL 163 158 158 VAL VAL H . n B 2 164 ASN 164 159 159 ASN ASN H . n B 2 165 LEU 165 160 160 LEU LEU H . n B 2 166 PRO 166 161 161 PRO PRO H . n B 2 167 ILE 167 162 162 ILE ILE H . n B 2 168 VAL 168 163 163 VAL VAL H . n B 2 169 GLU 169 164 164 GLU GLU H . n B 2 170 ARG 170 165 165 ARG ARG H . n B 2 171 PRO 171 166 166 PRO PRO H . n B 2 172 VAL 172 167 167 VAL VAL H . n B 2 173 CYS 173 168 168 CYS CYS H . n B 2 174 LYS 174 169 169 LYS LYS H . n B 2 175 ASP 175 170 170 ASP ASP H . n B 2 176 SER 176 171 171 SER SER H . n B 2 177 THR 177 172 172 THR THR H . n B 2 178 ARG 178 173 173 ARG ARG H . n B 2 179 ILE 179 174 174 ILE ILE H . n B 2 180 ARG 180 175 175 ARG ARG H . n B 2 181 ILE 181 176 176 ILE ILE H . n B 2 182 THR 182 177 177 THR THR H . n B 2 183 ASP 183 178 178 ASP ASP H . n B 2 184 ASN 184 179 179 ASN ASN H . n B 2 185 MET 185 180 180 MET MET H . n B 2 186 PHE 186 181 181 PHE PHE H . n B 2 187 CYS 187 182 182 CYS CYS H . n B 2 188 ALA 188 183 183 ALA ALA H . n B 2 189 GLY 189 184 184 GLY GLY H . n B 2 190 TYR 190 184 184 TYR TYR H A n B 2 191 LYS 191 185 185 LYS LYS H . n B 2 192 PRO 192 186 186 PRO PRO H . n B 2 193 ASP 193 186 186 ASP ASP H A n B 2 194 GLU 194 186 186 GLU GLU H B n B 2 195 GLY 195 186 186 GLY GLY H C n B 2 196 LYS 196 186 186 LYS LYS H D n B 2 197 ARG 197 187 187 ARG ARG H . n B 2 198 GLY 198 188 188 GLY GLY H . n B 2 199 ASP 199 189 189 ASP ASP H . n B 2 200 ALA 200 190 190 ALA ALA H . n B 2 201 CYS 201 191 191 CYS CYS H . n B 2 202 GLU 202 192 192 GLU GLU H . n B 2 203 GLY 203 193 193 GLY GLY H . n B 2 204 ASP 204 194 194 ASP ASP H . n B 2 205 SER 205 195 195 SER SER H . n B 2 206 GLY 206 196 196 GLY GLY H . n B 2 207 GLY 207 197 197 GLY GLY H . n B 2 208 PRO 208 198 198 PRO PRO H . n B 2 209 PHE 209 199 199 PHE PHE H . n B 2 210 VAL 210 200 200 VAL VAL H . n B 2 211 MET 211 201 201 MET MET H . n B 2 212 LYS 212 202 202 LYS LYS H . n B 2 213 SER 213 203 203 SER SER H . n B 2 214 PRO 214 204 204 PRO PRO H . n B 2 215 PHE 215 204 204 PHE PHE H A n B 2 216 ASN 216 204 204 ASN ASN H B n B 2 217 ASN 217 205 205 ASN ASN H . n B 2 218 ARG 218 206 206 ARG ARG H . n B 2 219 TRP 219 207 207 TRP TRP H . n B 2 220 TYR 220 208 208 TYR TYR H . n B 2 221 GLN 221 209 209 GLN GLN H . n B 2 222 MET 222 210 210 MET MET H . n B 2 223 GLY 223 211 211 GLY GLY H . n B 2 224 ILE 224 212 212 ILE ILE H . n B 2 225 VAL 225 213 213 VAL VAL H . n B 2 226 SER 226 214 214 SER SER H . n B 2 227 TRP 227 215 215 TRP TRP H . n B 2 228 GLY 228 216 216 GLY GLY H . n B 2 229 GLU 229 217 217 GLU GLU H . n B 2 230 GLY 230 219 219 GLY GLY H . n B 2 231 CYS 231 220 220 CYS CYS H . n B 2 232 ASP 232 221 221 ASP ASP H . n B 2 233 ARG 233 221 221 ARG ARG H A n B 2 234 ASP 234 222 222 ASP ASP H . n B 2 235 GLY 235 223 223 GLY GLY H . n B 2 236 LYS 236 224 224 LYS LYS H . n B 2 237 TYR 237 225 225 TYR TYR H . n B 2 238 GLY 238 226 226 GLY GLY H . n B 2 239 PHE 239 227 227 PHE PHE H . n B 2 240 TYR 240 228 228 TYR TYR H . n B 2 241 THR 241 229 229 THR THR H . n B 2 242 HIS 242 230 230 HIS HIS H . n B 2 243 VAL 243 231 231 VAL VAL H . n B 2 244 PHE 244 232 232 PHE PHE H . n B 2 245 ARG 245 233 233 ARG ARG H . n B 2 246 LEU 246 234 234 LEU LEU H . n B 2 247 LYS 247 235 235 LYS LYS H . n B 2 248 LYS 248 236 236 LYS ALA H . n B 2 249 TRP 249 237 237 TRP TRP H . n B 2 250 ILE 250 238 238 ILE ILE H . n B 2 251 GLN 251 239 239 GLN GLN H . n B 2 252 LYS 252 240 240 LYS LYS H . n B 2 253 VAL 253 241 241 VAL VAL H . n B 2 254 ILE 254 242 242 ILE ILE H . n B 2 255 ASP 255 243 243 ASP ASP H . n B 2 256 GLN 256 244 244 GLN GLN H . n B 2 257 PHE 257 245 245 PHE PHE H . n B 2 258 GLY 258 246 246 GLY GLY H . n B 2 259 GLU 259 247 ? ? ? H . n C 3 1 ASN 1 53 ? ? ? I . n C 3 2 GLY 2 54 ? ? ? I . n C 3 3 ASP 3 55 55 ASP ASP I . n C 3 4 PHE 4 56 56 PHE PHE I . n C 3 5 GLU 5 57 57 GLU GLU I . n C 3 6 GLU 6 58 58 GLU GLU I . n C 3 7 ILE 7 59 59 ILE ILE I . n C 3 8 PRO 8 60 60 PRO PRO I . n C 3 9 GLU 9 61 61 GLU ALA I . n C 3 10 GLU 10 62 62 GLU GLU I . n C 3 11 TYS 11 63 63 TYS TYS I . n C 3 12 LEU 12 64 64 LEU LEU I . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NA 1 601 601 NA NA H . E 4 NA 1 602 602 NA NA H . F 5 13U 1 501 501 13U 13U H . G 6 HOH 1 1005 1005 HOH HOH L . G 6 HOH 2 1006 1006 HOH HOH L . G 6 HOH 3 1010 1010 HOH HOH L . G 6 HOH 4 1020 1020 HOH HOH L . G 6 HOH 5 1040 1040 HOH HOH L . G 6 HOH 6 1042 1042 HOH HOH L . G 6 HOH 7 1045 1045 HOH HOH L . G 6 HOH 8 1049 1049 HOH HOH L . G 6 HOH 9 1052 1052 HOH HOH L . G 6 HOH 10 1066 1066 HOH HOH L . G 6 HOH 11 1067 1067 HOH HOH L . G 6 HOH 12 1072 1072 HOH HOH L . G 6 HOH 13 1080 1080 HOH HOH L . G 6 HOH 14 1097 1097 HOH HOH L . G 6 HOH 15 1099 1099 HOH HOH L . G 6 HOH 16 1118 1118 HOH HOH L . G 6 HOH 17 1119 1119 HOH HOH L . G 6 HOH 18 1121 1121 HOH HOH L . G 6 HOH 19 1126 1126 HOH HOH L . G 6 HOH 20 1127 1127 HOH HOH L . H 6 HOH 1 1001 1001 HOH HOH H . H 6 HOH 2 1002 1002 HOH HOH H . H 6 HOH 3 1003 1003 HOH HOH H . H 6 HOH 4 1004 1004 HOH HOH H . H 6 HOH 5 1007 1007 HOH HOH H . H 6 HOH 6 1008 1008 HOH HOH H . H 6 HOH 7 1009 1009 HOH HOH H . H 6 HOH 8 1011 1011 HOH HOH H . H 6 HOH 9 1012 1012 HOH HOH H . H 6 HOH 10 1013 1013 HOH HOH H . H 6 HOH 11 1014 1014 HOH HOH H . H 6 HOH 12 1015 1015 HOH HOH H . H 6 HOH 13 1016 1016 HOH HOH H . H 6 HOH 14 1017 1017 HOH HOH H . H 6 HOH 15 1018 1018 HOH HOH H . H 6 HOH 16 1019 1019 HOH HOH H . H 6 HOH 17 1021 1021 HOH HOH H . H 6 HOH 18 1022 1022 HOH HOH H . H 6 HOH 19 1023 1023 HOH HOH H . H 6 HOH 20 1024 1024 HOH HOH H . H 6 HOH 21 1025 1025 HOH HOH H . H 6 HOH 22 1026 1026 HOH HOH H . H 6 HOH 23 1027 1027 HOH HOH H . H 6 HOH 24 1028 1028 HOH HOH H . H 6 HOH 25 1029 1029 HOH HOH H . H 6 HOH 26 1030 1030 HOH HOH H . H 6 HOH 27 1031 1031 HOH HOH H . H 6 HOH 28 1032 1032 HOH HOH H . H 6 HOH 29 1033 1033 HOH HOH H . H 6 HOH 30 1034 1034 HOH HOH H . H 6 HOH 31 1035 1035 HOH HOH H . H 6 HOH 32 1036 1036 HOH HOH H . H 6 HOH 33 1037 1037 HOH HOH H . H 6 HOH 34 1038 1038 HOH HOH H . H 6 HOH 35 1039 1039 HOH HOH H . H 6 HOH 36 1041 1041 HOH HOH H . H 6 HOH 37 1043 1043 HOH HOH H . H 6 HOH 38 1044 1044 HOH HOH H . H 6 HOH 39 1046 1046 HOH HOH H . H 6 HOH 40 1047 1047 HOH HOH H . H 6 HOH 41 1048 1048 HOH HOH H . H 6 HOH 42 1050 1050 HOH HOH H . H 6 HOH 43 1051 1051 HOH HOH H . H 6 HOH 44 1053 1053 HOH HOH H . H 6 HOH 45 1054 1054 HOH HOH H . H 6 HOH 46 1055 1055 HOH HOH H . H 6 HOH 47 1056 1056 HOH HOH H . H 6 HOH 48 1057 1057 HOH HOH H . H 6 HOH 49 1058 1058 HOH HOH H . H 6 HOH 50 1059 1059 HOH HOH H . H 6 HOH 51 1060 1060 HOH HOH H . H 6 HOH 52 1061 1061 HOH HOH H . H 6 HOH 53 1062 1062 HOH HOH H . H 6 HOH 54 1063 1063 HOH HOH H . H 6 HOH 55 1064 1064 HOH HOH H . H 6 HOH 56 1065 1065 HOH HOH H . H 6 HOH 57 1068 1068 HOH HOH H . H 6 HOH 58 1069 1069 HOH HOH H . H 6 HOH 59 1070 1070 HOH HOH H . H 6 HOH 60 1071 1071 HOH HOH H . H 6 HOH 61 1073 1073 HOH HOH H . H 6 HOH 62 1074 1074 HOH HOH H . H 6 HOH 63 1075 1075 HOH HOH H . H 6 HOH 64 1076 1076 HOH HOH H . H 6 HOH 65 1077 1077 HOH HOH H . H 6 HOH 66 1078 1078 HOH HOH H . H 6 HOH 67 1079 1079 HOH HOH H . H 6 HOH 68 1081 1081 HOH HOH H . H 6 HOH 69 1082 1082 HOH HOH H . H 6 HOH 70 1083 1083 HOH HOH H . H 6 HOH 71 1084 1084 HOH HOH H . H 6 HOH 72 1085 1085 HOH HOH H . H 6 HOH 73 1086 1086 HOH HOH H . H 6 HOH 74 1087 1087 HOH HOH H . H 6 HOH 75 1088 1088 HOH HOH H . H 6 HOH 76 1089 1089 HOH HOH H . H 6 HOH 77 1090 1090 HOH HOH H . H 6 HOH 78 1091 1091 HOH HOH H . H 6 HOH 79 1092 1092 HOH HOH H . H 6 HOH 80 1093 1093 HOH HOH H . H 6 HOH 81 1094 1094 HOH HOH H . H 6 HOH 82 1095 1095 HOH HOH H . H 6 HOH 83 1096 1096 HOH HOH H . H 6 HOH 84 1098 1098 HOH HOH H . H 6 HOH 85 1100 1100 HOH HOH H . H 6 HOH 86 1101 1101 HOH HOH H . H 6 HOH 87 1102 1102 HOH HOH H . H 6 HOH 88 1103 1103 HOH HOH H . H 6 HOH 89 1104 1104 HOH HOH H . H 6 HOH 90 1105 1105 HOH HOH H . H 6 HOH 91 1106 1106 HOH HOH H . H 6 HOH 92 1107 1107 HOH HOH H . H 6 HOH 93 1108 1108 HOH HOH H . H 6 HOH 94 1109 1109 HOH HOH H . H 6 HOH 95 1110 1110 HOH HOH H . H 6 HOH 96 1111 1111 HOH HOH H . H 6 HOH 97 1112 1112 HOH HOH H . H 6 HOH 98 1113 1113 HOH HOH H . H 6 HOH 99 1114 1114 HOH HOH H . H 6 HOH 100 1115 1115 HOH HOH H . H 6 HOH 101 1116 1116 HOH HOH H . H 6 HOH 102 1117 1117 HOH HOH H . H 6 HOH 103 1120 1120 HOH HOH H . H 6 HOH 104 1122 1122 HOH HOH H . H 6 HOH 105 1123 1123 HOH HOH H . H 6 HOH 106 1124 1124 HOH HOH H . H 6 HOH 107 1125 1125 HOH HOH H . H 6 HOH 108 1128 1128 HOH HOH H . H 6 HOH 109 1129 1129 HOH HOH H . H 6 HOH 110 1130 1130 HOH HOH H . H 6 HOH 111 1132 1132 HOH HOH H . H 6 HOH 112 1133 1133 HOH HOH H . H 6 HOH 113 1134 1134 HOH HOH H . H 6 HOH 114 1135 1135 HOH HOH H . H 6 HOH 115 1136 1136 HOH HOH H . I 6 HOH 1 1131 1131 HOH HOH I . I 6 HOH 2 1137 1137 HOH HOH I . # _pdbx_molecule_features.prd_id PRD_000589 _pdbx_molecule_features.name 'N-cyclooctylglycyl-N-(4-carbamimidoylbenzyl)-L-prolinamide' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class 'Thrombin inhibitor' _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000589 _pdbx_molecule.asym_id F # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id C _pdbx_struct_mod_residue.label_comp_id TYS _pdbx_struct_mod_residue.label_seq_id 11 _pdbx_struct_mod_residue.auth_asym_id I _pdbx_struct_mod_residue.auth_comp_id TYS _pdbx_struct_mod_residue.auth_seq_id 63 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id TYR _pdbx_struct_mod_residue.details O-SULFO-L-TYROSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3500 ? 1 MORE -32 ? 1 'SSA (A^2)' 12500 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id H _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 1029 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id H _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-02-10 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-12-12 4 'Structure model' 1 3 2016-05-25 5 'Structure model' 1 4 2023-11-01 6 'Structure model' 1 5 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Non-polymer description' 5 2 'Structure model' 'Structure summary' 6 2 'Structure model' 'Version format compliance' 7 3 'Structure model' Other 8 4 'Structure model' 'Source and taxonomy' 9 5 'Structure model' 'Data collection' 10 5 'Structure model' 'Database references' 11 5 'Structure model' 'Derived calculations' 12 5 'Structure model' 'Refinement description' 13 6 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_initial_refinement_model 5 5 'Structure model' struct_conn 6 5 'Structure model' struct_site 7 6 'Structure model' chem_comp_atom 8 6 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 5 'Structure model' '_struct_site.pdbx_auth_seq_id' 7 6 'Structure model' '_chem_comp_atom.atom_id' 8 6 'Structure model' '_chem_comp_bond.atom_id_2' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELX 'model building' . ? 1 SHELXL-97 refinement . ? 2 CrystalClear 'data collection' . ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 CNS phasing . ? 6 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB H VAL 158 ? ? CA H VAL 158 ? ? C H VAL 158 ? ? 99.49 111.40 -11.91 1.90 N 2 1 CB H TYR 208 ? ? CG H TYR 208 ? ? CD1 H TYR 208 ? ? 116.74 121.00 -4.26 0.60 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE L 7 ? ? -126.01 -86.53 2 1 ALA H 44 ? ? 179.60 -177.94 3 1 ASN H 60 G ? -162.29 91.81 4 1 HIS H 71 ? ? -134.36 -55.50 5 1 ILE H 79 ? ? -123.10 -66.27 6 1 LYS H 87 ? ? -171.34 142.59 7 1 GLU H 97 A ? -107.39 -72.79 8 1 ASP H 102 ? ? -68.96 81.16 9 1 SER H 195 ? ? -34.45 140.49 10 1 SER H 214 ? ? -124.62 -61.49 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 H ARG 75 ? CG ? B ARG 70 CG 2 1 Y 1 H ARG 75 ? CD ? B ARG 70 CD 3 1 Y 1 H ARG 75 ? NE ? B ARG 70 NE 4 1 Y 1 H ARG 75 ? CZ ? B ARG 70 CZ 5 1 Y 1 H ARG 75 ? NH1 ? B ARG 70 NH1 6 1 Y 1 H ARG 75 ? NH2 ? B ARG 70 NH2 7 1 Y 1 H LYS 236 ? CG ? B LYS 248 CG 8 1 Y 1 H LYS 236 ? CD ? B LYS 248 CD 9 1 Y 1 H LYS 236 ? CE ? B LYS 248 CE 10 1 Y 1 H LYS 236 ? NZ ? B LYS 248 NZ 11 1 Y 1 I GLU 61 ? CG ? C GLU 9 CG 12 1 Y 1 I GLU 61 ? CD ? C GLU 9 CD 13 1 Y 1 I GLU 61 ? OE1 ? C GLU 9 OE1 14 1 Y 1 I GLU 61 ? OE2 ? C GLU 9 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 L THR 1 H A THR 1 2 1 Y 1 L PHE 1 G A PHE 2 3 1 Y 1 L GLY 1 F A GLY 3 4 1 Y 1 L SER 1 E A SER 4 5 1 Y 1 L GLY 1 D A GLY 5 6 1 Y 1 L GLU 1 C A GLU 6 7 1 Y 1 L ASP 14 L A ASP 34 8 1 Y 1 L GLY 14 M A GLY 35 9 1 Y 1 L ARG 14 N A ARG 36 10 1 Y 1 H THR 146 A B THR 147 11 1 Y 1 H TRP 146 B B TRP 148 12 1 Y 1 H THR 146 C B THR 149 13 1 Y 1 H ALA 146 D B ALA 150 14 1 Y 1 H ASN 146 E B ASN 151 15 1 Y 1 H VAL 146 F B VAL 152 16 1 Y 1 H GLY 146 G B GLY 153 17 1 Y 1 H LYS 146 H B LYS 154 18 1 Y 1 H GLU 247 ? B GLU 259 19 1 Y 1 I ASN 53 ? C ASN 1 20 1 Y 1 I GLY 54 ? C GLY 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 13U C14 C N N 1 13U O32 O N N 2 13U C5 C N N 3 13U N21 N N N 4 13U C49 C N N 5 13U C48 C N N 6 13U C47 C N N 7 13U C46 C N N 8 13U C45 C N N 9 13U C44 C N N 10 13U C43 C N N 11 13U C42 C N N 12 13U N1 N N N 13 13U C1 C N S 14 13U C7 C N N 15 13U O22 O N N 16 13U C2 C N N 17 13U C3 C N N 18 13U C4 C N N 19 13U N23 N N N 20 13U C24 C N N 21 13U C25 C Y N 22 13U C30 C Y N 23 13U C29 C Y N 24 13U C28 C Y N 25 13U C21 C N N 26 13U N46 N N N 27 13U N47 N N N 28 13U C27 C Y N 29 13U C26 C Y N 30 13U H5 H N N 31 13U H5A H N N 32 13U HN21 H N N 33 13U H49 H N N 34 13U H48 H N N 35 13U H48A H N N 36 13U H47 H N N 37 13U H47A H N N 38 13U H46 H N N 39 13U H46A H N N 40 13U H45 H N N 41 13U H45A H N N 42 13U H44 H N N 43 13U H44A H N N 44 13U H43 H N N 45 13U H43A H N N 46 13U H42 H N N 47 13U H42A H N N 48 13U H1 H N N 49 13U H2 H N N 50 13U H2A H N N 51 13U H3 H N N 52 13U H3A H N N 53 13U H4 H N N 54 13U H4A H N N 55 13U HN23 H N N 56 13U H24 H N N 57 13U H24A H N N 58 13U H30 H N N 59 13U H29 H N N 60 13U HN46 H N N 61 13U HN47 H N N 62 13U HN4A H N N 63 13U H27 H N N 64 13U H26 H N N 65 ALA N N N N 66 ALA CA C N S 67 ALA C C N N 68 ALA O O N N 69 ALA CB C N N 70 ALA OXT O N N 71 ALA H H N N 72 ALA H2 H N N 73 ALA HA H N N 74 ALA HB1 H N N 75 ALA HB2 H N N 76 ALA HB3 H N N 77 ALA HXT H N N 78 ARG N N N N 79 ARG CA C N S 80 ARG C C N N 81 ARG O O N N 82 ARG CB C N N 83 ARG CG C N N 84 ARG CD C N N 85 ARG NE N N N 86 ARG CZ C N N 87 ARG NH1 N N N 88 ARG NH2 N N N 89 ARG OXT O N N 90 ARG H H N N 91 ARG H2 H N N 92 ARG HA H N N 93 ARG HB2 H N N 94 ARG HB3 H N N 95 ARG HG2 H N N 96 ARG HG3 H N N 97 ARG HD2 H N N 98 ARG HD3 H N N 99 ARG HE H N N 100 ARG HH11 H N N 101 ARG HH12 H N N 102 ARG HH21 H N N 103 ARG HH22 H N N 104 ARG HXT H N N 105 ASN N N N N 106 ASN CA C N S 107 ASN C C N N 108 ASN O O N N 109 ASN CB C N N 110 ASN CG C N N 111 ASN OD1 O N N 112 ASN ND2 N N N 113 ASN OXT O N N 114 ASN H H N N 115 ASN H2 H N N 116 ASN HA H N N 117 ASN HB2 H N N 118 ASN HB3 H N N 119 ASN HD21 H N N 120 ASN HD22 H N N 121 ASN HXT H N N 122 ASP N N N N 123 ASP CA C N S 124 ASP C C N N 125 ASP O O N N 126 ASP CB C N N 127 ASP CG C N N 128 ASP OD1 O N N 129 ASP OD2 O N N 130 ASP OXT O N N 131 ASP H H N N 132 ASP H2 H N N 133 ASP HA H N N 134 ASP HB2 H N N 135 ASP HB3 H N N 136 ASP HD2 H N N 137 ASP HXT H N N 138 CYS N N N N 139 CYS CA C N R 140 CYS C C N N 141 CYS O O N N 142 CYS CB C N N 143 CYS SG S N N 144 CYS OXT O N N 145 CYS H H N N 146 CYS H2 H N N 147 CYS HA H N N 148 CYS HB2 H N N 149 CYS HB3 H N N 150 CYS HG H N N 151 CYS HXT H N N 152 GLN N N N N 153 GLN CA C N S 154 GLN C C N N 155 GLN O O N N 156 GLN CB C N N 157 GLN CG C N N 158 GLN CD C N N 159 GLN OE1 O N N 160 GLN NE2 N N N 161 GLN OXT O N N 162 GLN H H N N 163 GLN H2 H N N 164 GLN HA H N N 165 GLN HB2 H N N 166 GLN HB3 H N N 167 GLN HG2 H N N 168 GLN HG3 H N N 169 GLN HE21 H N N 170 GLN HE22 H N N 171 GLN HXT H N N 172 GLU N N N N 173 GLU CA C N S 174 GLU C C N N 175 GLU O O N N 176 GLU CB C N N 177 GLU CG C N N 178 GLU CD C N N 179 GLU OE1 O N N 180 GLU OE2 O N N 181 GLU OXT O N N 182 GLU H H N N 183 GLU H2 H N N 184 GLU HA H N N 185 GLU HB2 H N N 186 GLU HB3 H N N 187 GLU HG2 H N N 188 GLU HG3 H N N 189 GLU HE2 H N N 190 GLU HXT H N N 191 GLY N N N N 192 GLY CA C N N 193 GLY C C N N 194 GLY O O N N 195 GLY OXT O N N 196 GLY H H N N 197 GLY H2 H N N 198 GLY HA2 H N N 199 GLY HA3 H N N 200 GLY HXT H N N 201 HIS N N N N 202 HIS CA C N S 203 HIS C C N N 204 HIS O O N N 205 HIS CB C N N 206 HIS CG C Y N 207 HIS ND1 N Y N 208 HIS CD2 C Y N 209 HIS CE1 C Y N 210 HIS NE2 N Y N 211 HIS OXT O N N 212 HIS H H N N 213 HIS H2 H N N 214 HIS HA H N N 215 HIS HB2 H N N 216 HIS HB3 H N N 217 HIS HD1 H N N 218 HIS HD2 H N N 219 HIS HE1 H N N 220 HIS HE2 H N N 221 HIS HXT H N N 222 HOH O O N N 223 HOH H1 H N N 224 HOH H2 H N N 225 ILE N N N N 226 ILE CA C N S 227 ILE C C N N 228 ILE O O N N 229 ILE CB C N S 230 ILE CG1 C N N 231 ILE CG2 C N N 232 ILE CD1 C N N 233 ILE OXT O N N 234 ILE H H N N 235 ILE H2 H N N 236 ILE HA H N N 237 ILE HB H N N 238 ILE HG12 H N N 239 ILE HG13 H N N 240 ILE HG21 H N N 241 ILE HG22 H N N 242 ILE HG23 H N N 243 ILE HD11 H N N 244 ILE HD12 H N N 245 ILE HD13 H N N 246 ILE HXT H N N 247 LEU N N N N 248 LEU CA C N S 249 LEU C C N N 250 LEU O O N N 251 LEU CB C N N 252 LEU CG C N N 253 LEU CD1 C N N 254 LEU CD2 C N N 255 LEU OXT O N N 256 LEU H H N N 257 LEU H2 H N N 258 LEU HA H N N 259 LEU HB2 H N N 260 LEU HB3 H N N 261 LEU HG H N N 262 LEU HD11 H N N 263 LEU HD12 H N N 264 LEU HD13 H N N 265 LEU HD21 H N N 266 LEU HD22 H N N 267 LEU HD23 H N N 268 LEU HXT H N N 269 LYS N N N N 270 LYS CA C N S 271 LYS C C N N 272 LYS O O N N 273 LYS CB C N N 274 LYS CG C N N 275 LYS CD C N N 276 LYS CE C N N 277 LYS NZ N N N 278 LYS OXT O N N 279 LYS H H N N 280 LYS H2 H N N 281 LYS HA H N N 282 LYS HB2 H N N 283 LYS HB3 H N N 284 LYS HG2 H N N 285 LYS HG3 H N N 286 LYS HD2 H N N 287 LYS HD3 H N N 288 LYS HE2 H N N 289 LYS HE3 H N N 290 LYS HZ1 H N N 291 LYS HZ2 H N N 292 LYS HZ3 H N N 293 LYS HXT H N N 294 MET N N N N 295 MET CA C N S 296 MET C C N N 297 MET O O N N 298 MET CB C N N 299 MET CG C N N 300 MET SD S N N 301 MET CE C N N 302 MET OXT O N N 303 MET H H N N 304 MET H2 H N N 305 MET HA H N N 306 MET HB2 H N N 307 MET HB3 H N N 308 MET HG2 H N N 309 MET HG3 H N N 310 MET HE1 H N N 311 MET HE2 H N N 312 MET HE3 H N N 313 MET HXT H N N 314 NA NA NA N N 315 PHE N N N N 316 PHE CA C N S 317 PHE C C N N 318 PHE O O N N 319 PHE CB C N N 320 PHE CG C Y N 321 PHE CD1 C Y N 322 PHE CD2 C Y N 323 PHE CE1 C Y N 324 PHE CE2 C Y N 325 PHE CZ C Y N 326 PHE OXT O N N 327 PHE H H N N 328 PHE H2 H N N 329 PHE HA H N N 330 PHE HB2 H N N 331 PHE HB3 H N N 332 PHE HD1 H N N 333 PHE HD2 H N N 334 PHE HE1 H N N 335 PHE HE2 H N N 336 PHE HZ H N N 337 PHE HXT H N N 338 PRO N N N N 339 PRO CA C N S 340 PRO C C N N 341 PRO O O N N 342 PRO CB C N N 343 PRO CG C N N 344 PRO CD C N N 345 PRO OXT O N N 346 PRO H H N N 347 PRO HA H N N 348 PRO HB2 H N N 349 PRO HB3 H N N 350 PRO HG2 H N N 351 PRO HG3 H N N 352 PRO HD2 H N N 353 PRO HD3 H N N 354 PRO HXT H N N 355 SER N N N N 356 SER CA C N S 357 SER C C N N 358 SER O O N N 359 SER CB C N N 360 SER OG O N N 361 SER OXT O N N 362 SER H H N N 363 SER H2 H N N 364 SER HA H N N 365 SER HB2 H N N 366 SER HB3 H N N 367 SER HG H N N 368 SER HXT H N N 369 THR N N N N 370 THR CA C N S 371 THR C C N N 372 THR O O N N 373 THR CB C N R 374 THR OG1 O N N 375 THR CG2 C N N 376 THR OXT O N N 377 THR H H N N 378 THR H2 H N N 379 THR HA H N N 380 THR HB H N N 381 THR HG1 H N N 382 THR HG21 H N N 383 THR HG22 H N N 384 THR HG23 H N N 385 THR HXT H N N 386 TRP N N N N 387 TRP CA C N S 388 TRP C C N N 389 TRP O O N N 390 TRP CB C N N 391 TRP CG C Y N 392 TRP CD1 C Y N 393 TRP CD2 C Y N 394 TRP NE1 N Y N 395 TRP CE2 C Y N 396 TRP CE3 C Y N 397 TRP CZ2 C Y N 398 TRP CZ3 C Y N 399 TRP CH2 C Y N 400 TRP OXT O N N 401 TRP H H N N 402 TRP H2 H N N 403 TRP HA H N N 404 TRP HB2 H N N 405 TRP HB3 H N N 406 TRP HD1 H N N 407 TRP HE1 H N N 408 TRP HE3 H N N 409 TRP HZ2 H N N 410 TRP HZ3 H N N 411 TRP HH2 H N N 412 TRP HXT H N N 413 TYR N N N N 414 TYR CA C N S 415 TYR C C N N 416 TYR O O N N 417 TYR CB C N N 418 TYR CG C Y N 419 TYR CD1 C Y N 420 TYR CD2 C Y N 421 TYR CE1 C Y N 422 TYR CE2 C Y N 423 TYR CZ C Y N 424 TYR OH O N N 425 TYR OXT O N N 426 TYR H H N N 427 TYR H2 H N N 428 TYR HA H N N 429 TYR HB2 H N N 430 TYR HB3 H N N 431 TYR HD1 H N N 432 TYR HD2 H N N 433 TYR HE1 H N N 434 TYR HE2 H N N 435 TYR HH H N N 436 TYR HXT H N N 437 TYS N N N N 438 TYS CA C N S 439 TYS CB C N N 440 TYS CG C Y N 441 TYS CD1 C Y N 442 TYS CD2 C Y N 443 TYS CE1 C Y N 444 TYS CE2 C Y N 445 TYS CZ C Y N 446 TYS OH O N N 447 TYS S S N N 448 TYS O1 O N N 449 TYS O2 O N N 450 TYS O3 O N N 451 TYS C C N N 452 TYS O O N N 453 TYS OXT O N N 454 TYS H H N N 455 TYS H2 H N N 456 TYS HA H N N 457 TYS HB2 H N N 458 TYS HB3 H N N 459 TYS HD1 H N N 460 TYS HD2 H N N 461 TYS HE1 H N N 462 TYS HE2 H N N 463 TYS HO3 H N N 464 TYS HXT H N N 465 VAL N N N N 466 VAL CA C N S 467 VAL C C N N 468 VAL O O N N 469 VAL CB C N N 470 VAL CG1 C N N 471 VAL CG2 C N N 472 VAL OXT O N N 473 VAL H H N N 474 VAL H2 H N N 475 VAL HA H N N 476 VAL HB H N N 477 VAL HG11 H N N 478 VAL HG12 H N N 479 VAL HG13 H N N 480 VAL HG21 H N N 481 VAL HG22 H N N 482 VAL HG23 H N N 483 VAL HXT H N N 484 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 13U O22 C7 doub N N 1 13U C7 N23 sing N N 2 13U C7 C1 sing N N 3 13U N23 C24 sing N N 4 13U C24 C25 sing N N 5 13U C25 C26 doub Y N 6 13U C25 C30 sing Y N 7 13U C26 C27 sing Y N 8 13U C27 C28 doub Y N 9 13U C28 C21 sing N N 10 13U C28 C29 sing Y N 11 13U C21 N46 doub N N 12 13U C21 N47 sing N N 13 13U C29 C30 doub Y N 14 13U C1 C2 sing N N 15 13U C1 N1 sing N N 16 13U C2 C3 sing N N 17 13U C3 C4 sing N N 18 13U C4 N1 sing N N 19 13U N1 C14 sing N N 20 13U C14 O32 doub N N 21 13U C14 C5 sing N N 22 13U C5 N21 sing N N 23 13U N21 C49 sing N N 24 13U C49 C48 sing N N 25 13U C49 C42 sing N N 26 13U C48 C47 sing N N 27 13U C47 C46 sing N N 28 13U C46 C45 sing N N 29 13U C45 C44 sing N N 30 13U C44 C43 sing N N 31 13U C43 C42 sing N N 32 13U N23 HN23 sing N N 33 13U C24 H24 sing N N 34 13U C24 H24A sing N N 35 13U C26 H26 sing N N 36 13U C27 H27 sing N N 37 13U N46 HN46 sing N N 38 13U N47 HN47 sing N N 39 13U N47 HN4A sing N N 40 13U C29 H29 sing N N 41 13U C30 H30 sing N N 42 13U C1 H1 sing N N 43 13U C2 H2 sing N N 44 13U C2 H2A sing N N 45 13U C3 H3 sing N N 46 13U C3 H3A sing N N 47 13U C4 H4 sing N N 48 13U C4 H4A sing N N 49 13U C5 H5 sing N N 50 13U C5 H5A sing N N 51 13U N21 HN21 sing N N 52 13U C49 H49 sing N N 53 13U C48 H48 sing N N 54 13U C48 H48A sing N N 55 13U C47 H47 sing N N 56 13U C47 H47A sing N N 57 13U C46 H46 sing N N 58 13U C46 H46A sing N N 59 13U C45 H45 sing N N 60 13U C45 H45A sing N N 61 13U C44 H44 sing N N 62 13U C44 H44A sing N N 63 13U C43 H43 sing N N 64 13U C43 H43A sing N N 65 13U C42 H42 sing N N 66 13U C42 H42A sing N N 67 ALA N CA sing N N 68 ALA N H sing N N 69 ALA N H2 sing N N 70 ALA CA C sing N N 71 ALA CA CB sing N N 72 ALA CA HA sing N N 73 ALA C O doub N N 74 ALA C OXT sing N N 75 ALA CB HB1 sing N N 76 ALA CB HB2 sing N N 77 ALA CB HB3 sing N N 78 ALA OXT HXT sing N N 79 ARG N CA sing N N 80 ARG N H sing N N 81 ARG N H2 sing N N 82 ARG CA C sing N N 83 ARG CA CB sing N N 84 ARG CA HA sing N N 85 ARG C O doub N N 86 ARG C OXT sing N N 87 ARG CB CG sing N N 88 ARG CB HB2 sing N N 89 ARG CB HB3 sing N N 90 ARG CG CD sing N N 91 ARG CG HG2 sing N N 92 ARG CG HG3 sing N N 93 ARG CD NE sing N N 94 ARG CD HD2 sing N N 95 ARG CD HD3 sing N N 96 ARG NE CZ sing N N 97 ARG NE HE sing N N 98 ARG CZ NH1 sing N N 99 ARG CZ NH2 doub N N 100 ARG NH1 HH11 sing N N 101 ARG NH1 HH12 sing N N 102 ARG NH2 HH21 sing N N 103 ARG NH2 HH22 sing N N 104 ARG OXT HXT sing N N 105 ASN N CA sing N N 106 ASN N H sing N N 107 ASN N H2 sing N N 108 ASN CA C sing N N 109 ASN CA CB sing N N 110 ASN CA HA sing N N 111 ASN C O doub N N 112 ASN C OXT sing N N 113 ASN CB CG sing N N 114 ASN CB HB2 sing N N 115 ASN CB HB3 sing N N 116 ASN CG OD1 doub N N 117 ASN CG ND2 sing N N 118 ASN ND2 HD21 sing N N 119 ASN ND2 HD22 sing N N 120 ASN OXT HXT sing N N 121 ASP N CA sing N N 122 ASP N H sing N N 123 ASP N H2 sing N N 124 ASP CA C sing N N 125 ASP CA CB sing N N 126 ASP CA HA sing N N 127 ASP C O doub N N 128 ASP C OXT sing N N 129 ASP CB CG sing N N 130 ASP CB HB2 sing N N 131 ASP CB HB3 sing N N 132 ASP CG OD1 doub N N 133 ASP CG OD2 sing N N 134 ASP OD2 HD2 sing N N 135 ASP OXT HXT sing N N 136 CYS N CA sing N N 137 CYS N H sing N N 138 CYS N H2 sing N N 139 CYS CA C sing N N 140 CYS CA CB sing N N 141 CYS CA HA sing N N 142 CYS C O doub N N 143 CYS C OXT sing N N 144 CYS CB SG sing N N 145 CYS CB HB2 sing N N 146 CYS CB HB3 sing N N 147 CYS SG HG sing N N 148 CYS OXT HXT sing N N 149 GLN N CA sing N N 150 GLN N H sing N N 151 GLN N H2 sing N N 152 GLN CA C sing N N 153 GLN CA CB sing N N 154 GLN CA HA sing N N 155 GLN C O doub N N 156 GLN C OXT sing N N 157 GLN CB CG sing N N 158 GLN CB HB2 sing N N 159 GLN CB HB3 sing N N 160 GLN CG CD sing N N 161 GLN CG HG2 sing N N 162 GLN CG HG3 sing N N 163 GLN CD OE1 doub N N 164 GLN CD NE2 sing N N 165 GLN NE2 HE21 sing N N 166 GLN NE2 HE22 sing N N 167 GLN OXT HXT sing N N 168 GLU N CA sing N N 169 GLU N H sing N N 170 GLU N H2 sing N N 171 GLU CA C sing N N 172 GLU CA CB sing N N 173 GLU CA HA sing N N 174 GLU C O doub N N 175 GLU C OXT sing N N 176 GLU CB CG sing N N 177 GLU CB HB2 sing N N 178 GLU CB HB3 sing N N 179 GLU CG CD sing N N 180 GLU CG HG2 sing N N 181 GLU CG HG3 sing N N 182 GLU CD OE1 doub N N 183 GLU CD OE2 sing N N 184 GLU OE2 HE2 sing N N 185 GLU OXT HXT sing N N 186 GLY N CA sing N N 187 GLY N H sing N N 188 GLY N H2 sing N N 189 GLY CA C sing N N 190 GLY CA HA2 sing N N 191 GLY CA HA3 sing N N 192 GLY C O doub N N 193 GLY C OXT sing N N 194 GLY OXT HXT sing N N 195 HIS N CA sing N N 196 HIS N H sing N N 197 HIS N H2 sing N N 198 HIS CA C sing N N 199 HIS CA CB sing N N 200 HIS CA HA sing N N 201 HIS C O doub N N 202 HIS C OXT sing N N 203 HIS CB CG sing N N 204 HIS CB HB2 sing N N 205 HIS CB HB3 sing N N 206 HIS CG ND1 sing Y N 207 HIS CG CD2 doub Y N 208 HIS ND1 CE1 doub Y N 209 HIS ND1 HD1 sing N N 210 HIS CD2 NE2 sing Y N 211 HIS CD2 HD2 sing N N 212 HIS CE1 NE2 sing Y N 213 HIS CE1 HE1 sing N N 214 HIS NE2 HE2 sing N N 215 HIS OXT HXT sing N N 216 HOH O H1 sing N N 217 HOH O H2 sing N N 218 ILE N CA sing N N 219 ILE N H sing N N 220 ILE N H2 sing N N 221 ILE CA C sing N N 222 ILE CA CB sing N N 223 ILE CA HA sing N N 224 ILE C O doub N N 225 ILE C OXT sing N N 226 ILE CB CG1 sing N N 227 ILE CB CG2 sing N N 228 ILE CB HB sing N N 229 ILE CG1 CD1 sing N N 230 ILE CG1 HG12 sing N N 231 ILE CG1 HG13 sing N N 232 ILE CG2 HG21 sing N N 233 ILE CG2 HG22 sing N N 234 ILE CG2 HG23 sing N N 235 ILE CD1 HD11 sing N N 236 ILE CD1 HD12 sing N N 237 ILE CD1 HD13 sing N N 238 ILE OXT HXT sing N N 239 LEU N CA sing N N 240 LEU N H sing N N 241 LEU N H2 sing N N 242 LEU CA C sing N N 243 LEU CA CB sing N N 244 LEU CA HA sing N N 245 LEU C O doub N N 246 LEU C OXT sing N N 247 LEU CB CG sing N N 248 LEU CB HB2 sing N N 249 LEU CB HB3 sing N N 250 LEU CG CD1 sing N N 251 LEU CG CD2 sing N N 252 LEU CG HG sing N N 253 LEU CD1 HD11 sing N N 254 LEU CD1 HD12 sing N N 255 LEU CD1 HD13 sing N N 256 LEU CD2 HD21 sing N N 257 LEU CD2 HD22 sing N N 258 LEU CD2 HD23 sing N N 259 LEU OXT HXT sing N N 260 LYS N CA sing N N 261 LYS N H sing N N 262 LYS N H2 sing N N 263 LYS CA C sing N N 264 LYS CA CB sing N N 265 LYS CA HA sing N N 266 LYS C O doub N N 267 LYS C OXT sing N N 268 LYS CB CG sing N N 269 LYS CB HB2 sing N N 270 LYS CB HB3 sing N N 271 LYS CG CD sing N N 272 LYS CG HG2 sing N N 273 LYS CG HG3 sing N N 274 LYS CD CE sing N N 275 LYS CD HD2 sing N N 276 LYS CD HD3 sing N N 277 LYS CE NZ sing N N 278 LYS CE HE2 sing N N 279 LYS CE HE3 sing N N 280 LYS NZ HZ1 sing N N 281 LYS NZ HZ2 sing N N 282 LYS NZ HZ3 sing N N 283 LYS OXT HXT sing N N 284 MET N CA sing N N 285 MET N H sing N N 286 MET N H2 sing N N 287 MET CA C sing N N 288 MET CA CB sing N N 289 MET CA HA sing N N 290 MET C O doub N N 291 MET C OXT sing N N 292 MET CB CG sing N N 293 MET CB HB2 sing N N 294 MET CB HB3 sing N N 295 MET CG SD sing N N 296 MET CG HG2 sing N N 297 MET CG HG3 sing N N 298 MET SD CE sing N N 299 MET CE HE1 sing N N 300 MET CE HE2 sing N N 301 MET CE HE3 sing N N 302 MET OXT HXT sing N N 303 PHE N CA sing N N 304 PHE N H sing N N 305 PHE N H2 sing N N 306 PHE CA C sing N N 307 PHE CA CB sing N N 308 PHE CA HA sing N N 309 PHE C O doub N N 310 PHE C OXT sing N N 311 PHE CB CG sing N N 312 PHE CB HB2 sing N N 313 PHE CB HB3 sing N N 314 PHE CG CD1 doub Y N 315 PHE CG CD2 sing Y N 316 PHE CD1 CE1 sing Y N 317 PHE CD1 HD1 sing N N 318 PHE CD2 CE2 doub Y N 319 PHE CD2 HD2 sing N N 320 PHE CE1 CZ doub Y N 321 PHE CE1 HE1 sing N N 322 PHE CE2 CZ sing Y N 323 PHE CE2 HE2 sing N N 324 PHE CZ HZ sing N N 325 PHE OXT HXT sing N N 326 PRO N CA sing N N 327 PRO N CD sing N N 328 PRO N H sing N N 329 PRO CA C sing N N 330 PRO CA CB sing N N 331 PRO CA HA sing N N 332 PRO C O doub N N 333 PRO C OXT sing N N 334 PRO CB CG sing N N 335 PRO CB HB2 sing N N 336 PRO CB HB3 sing N N 337 PRO CG CD sing N N 338 PRO CG HG2 sing N N 339 PRO CG HG3 sing N N 340 PRO CD HD2 sing N N 341 PRO CD HD3 sing N N 342 PRO OXT HXT sing N N 343 SER N CA sing N N 344 SER N H sing N N 345 SER N H2 sing N N 346 SER CA C sing N N 347 SER CA CB sing N N 348 SER CA HA sing N N 349 SER C O doub N N 350 SER C OXT sing N N 351 SER CB OG sing N N 352 SER CB HB2 sing N N 353 SER CB HB3 sing N N 354 SER OG HG sing N N 355 SER OXT HXT sing N N 356 THR N CA sing N N 357 THR N H sing N N 358 THR N H2 sing N N 359 THR CA C sing N N 360 THR CA CB sing N N 361 THR CA HA sing N N 362 THR C O doub N N 363 THR C OXT sing N N 364 THR CB OG1 sing N N 365 THR CB CG2 sing N N 366 THR CB HB sing N N 367 THR OG1 HG1 sing N N 368 THR CG2 HG21 sing N N 369 THR CG2 HG22 sing N N 370 THR CG2 HG23 sing N N 371 THR OXT HXT sing N N 372 TRP N CA sing N N 373 TRP N H sing N N 374 TRP N H2 sing N N 375 TRP CA C sing N N 376 TRP CA CB sing N N 377 TRP CA HA sing N N 378 TRP C O doub N N 379 TRP C OXT sing N N 380 TRP CB CG sing N N 381 TRP CB HB2 sing N N 382 TRP CB HB3 sing N N 383 TRP CG CD1 doub Y N 384 TRP CG CD2 sing Y N 385 TRP CD1 NE1 sing Y N 386 TRP CD1 HD1 sing N N 387 TRP CD2 CE2 doub Y N 388 TRP CD2 CE3 sing Y N 389 TRP NE1 CE2 sing Y N 390 TRP NE1 HE1 sing N N 391 TRP CE2 CZ2 sing Y N 392 TRP CE3 CZ3 doub Y N 393 TRP CE3 HE3 sing N N 394 TRP CZ2 CH2 doub Y N 395 TRP CZ2 HZ2 sing N N 396 TRP CZ3 CH2 sing Y N 397 TRP CZ3 HZ3 sing N N 398 TRP CH2 HH2 sing N N 399 TRP OXT HXT sing N N 400 TYR N CA sing N N 401 TYR N H sing N N 402 TYR N H2 sing N N 403 TYR CA C sing N N 404 TYR CA CB sing N N 405 TYR CA HA sing N N 406 TYR C O doub N N 407 TYR C OXT sing N N 408 TYR CB CG sing N N 409 TYR CB HB2 sing N N 410 TYR CB HB3 sing N N 411 TYR CG CD1 doub Y N 412 TYR CG CD2 sing Y N 413 TYR CD1 CE1 sing Y N 414 TYR CD1 HD1 sing N N 415 TYR CD2 CE2 doub Y N 416 TYR CD2 HD2 sing N N 417 TYR CE1 CZ doub Y N 418 TYR CE1 HE1 sing N N 419 TYR CE2 CZ sing Y N 420 TYR CE2 HE2 sing N N 421 TYR CZ OH sing N N 422 TYR OH HH sing N N 423 TYR OXT HXT sing N N 424 TYS N CA sing N N 425 TYS N H sing N N 426 TYS N H2 sing N N 427 TYS CA CB sing N N 428 TYS CA C sing N N 429 TYS CA HA sing N N 430 TYS CB CG sing N N 431 TYS CB HB2 sing N N 432 TYS CB HB3 sing N N 433 TYS CG CD1 doub Y N 434 TYS CG CD2 sing Y N 435 TYS CD1 CE1 sing Y N 436 TYS CD1 HD1 sing N N 437 TYS CD2 CE2 doub Y N 438 TYS CD2 HD2 sing N N 439 TYS CE1 CZ doub Y N 440 TYS CE1 HE1 sing N N 441 TYS CE2 CZ sing Y N 442 TYS CE2 HE2 sing N N 443 TYS CZ OH sing N N 444 TYS OH S sing N N 445 TYS S O1 doub N N 446 TYS S O2 doub N N 447 TYS S O3 sing N N 448 TYS O3 HO3 sing N N 449 TYS C O doub N N 450 TYS C OXT sing N N 451 TYS OXT HXT sing N N 452 VAL N CA sing N N 453 VAL N H sing N N 454 VAL N H2 sing N N 455 VAL CA C sing N N 456 VAL CA CB sing N N 457 VAL CA HA sing N N 458 VAL C O doub N N 459 VAL C OXT sing N N 460 VAL CB CG1 sing N N 461 VAL CB CG2 sing N N 462 VAL CB HB sing N N 463 VAL CG1 HG11 sing N N 464 VAL CG1 HG12 sing N N 465 VAL CG1 HG13 sing N N 466 VAL CG2 HG21 sing N N 467 VAL CG2 HG22 sing N N 468 VAL CG2 HG23 sing N N 469 VAL OXT HXT sing N N 470 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'SODIUM ION' NA 5 'N-cyclooctylglycyl-N-(4-carbamimidoylbenzyl)-L-prolinamide' 13U 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1H8D _pdbx_initial_refinement_model.details 'PDB entry 1H8D' #