data_2ZHG # _entry.id 2ZHG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2ZHG pdb_00002zhg 10.2210/pdb2zhg/pdb NDB PD1091 ? ? RCSB RCSB027976 ? ? WWPDB D_1000027976 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-03-25 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2ZHG _pdbx_database_status.recvd_initial_deposition_date 2008-02-05 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2ZHH _pdbx_database_related.details 'the same protein without DNA' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Watanabe, S.' 1 'Kita, A.' 2 'Kobayashi, K.' 3 'Miki, K.' 4 # _citation.id primary _citation.title 'Crystal structure of the [2Fe-2S] oxidative-stress sensor SoxR bound to DNA' _citation.journal_abbrev Proc.Natl.Acad.Sci.Usa _citation.journal_volume 105 _citation.page_first 4121 _citation.page_last 4126 _citation.year 2008 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18334645 _citation.pdbx_database_id_DOI 10.1073/pnas.0709188105 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Watanabe, S.' 1 ? primary 'Kita, A.' 2 ? primary 'Kobayashi, K.' 3 ? primary 'Miki, K.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*DGP*DCP*DCP*DTP*DCP*DAP*DAP*DGP*DTP*DTP*DAP*DAP*DCP*DTP*DTP*DGP*DAP*DGP*DGP*DC)-3') ; 6133.979 1 ? ? ? ? 2 polymer man 'Redox-sensitive transcriptional activator soxR' 17177.752 1 ? ? ? ? 3 non-polymer syn 'FE2/S2 (INORGANIC) CLUSTER' 175.820 1 ? ? ? ? 4 non-polymer syn 2,3-DIHYDROXY-1,4-DITHIOBUTANE 154.251 1 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 6 water nat water 18.015 22 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DC)(DC)(DT)(DC)(DA)(DA)(DG)(DT)(DT)(DA)(DA)(DC)(DT)(DT)(DG)(DA)(DG)(DG)(DC)' GCCTCAAGTTAACTTGAGGC B ? 2 'polypeptide(L)' no no ;MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSGNQRRYKRDVLRYVAIIKIAQRIGIPLATIGEAFGVL PEGHTLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN ; ;MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSGNQRRYKRDVLRYVAIIKIAQRIGIPLATIGEAFGVL PEGHTLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN ; A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'FE2/S2 (INORGANIC) CLUSTER' FES 4 2,3-DIHYDROXY-1,4-DITHIOBUTANE DTT 5 GLYCEROL GOL 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DC n 1 4 DT n 1 5 DC n 1 6 DA n 1 7 DA n 1 8 DG n 1 9 DT n 1 10 DT n 1 11 DA n 1 12 DA n 1 13 DC n 1 14 DT n 1 15 DT n 1 16 DG n 1 17 DA n 1 18 DG n 1 19 DG n 1 20 DC n 2 1 MET n 2 2 GLU n 2 3 LYS n 2 4 LYS n 2 5 LEU n 2 6 PRO n 2 7 ARG n 2 8 ILE n 2 9 LYS n 2 10 ALA n 2 11 LEU n 2 12 LEU n 2 13 THR n 2 14 PRO n 2 15 GLY n 2 16 GLU n 2 17 VAL n 2 18 ALA n 2 19 LYS n 2 20 ARG n 2 21 SER n 2 22 GLY n 2 23 VAL n 2 24 ALA n 2 25 VAL n 2 26 SER n 2 27 ALA n 2 28 LEU n 2 29 HIS n 2 30 PHE n 2 31 TYR n 2 32 GLU n 2 33 SER n 2 34 LYS n 2 35 GLY n 2 36 LEU n 2 37 ILE n 2 38 THR n 2 39 SER n 2 40 ILE n 2 41 ARG n 2 42 ASN n 2 43 SER n 2 44 GLY n 2 45 ASN n 2 46 GLN n 2 47 ARG n 2 48 ARG n 2 49 TYR n 2 50 LYS n 2 51 ARG n 2 52 ASP n 2 53 VAL n 2 54 LEU n 2 55 ARG n 2 56 TYR n 2 57 VAL n 2 58 ALA n 2 59 ILE n 2 60 ILE n 2 61 LYS n 2 62 ILE n 2 63 ALA n 2 64 GLN n 2 65 ARG n 2 66 ILE n 2 67 GLY n 2 68 ILE n 2 69 PRO n 2 70 LEU n 2 71 ALA n 2 72 THR n 2 73 ILE n 2 74 GLY n 2 75 GLU n 2 76 ALA n 2 77 PHE n 2 78 GLY n 2 79 VAL n 2 80 LEU n 2 81 PRO n 2 82 GLU n 2 83 GLY n 2 84 HIS n 2 85 THR n 2 86 LEU n 2 87 SER n 2 88 ALA n 2 89 LYS n 2 90 GLU n 2 91 TRP n 2 92 LYS n 2 93 GLN n 2 94 LEU n 2 95 SER n 2 96 SER n 2 97 GLN n 2 98 TRP n 2 99 ARG n 2 100 GLU n 2 101 GLU n 2 102 LEU n 2 103 ASP n 2 104 ARG n 2 105 ARG n 2 106 ILE n 2 107 HIS n 2 108 THR n 2 109 LEU n 2 110 VAL n 2 111 ALA n 2 112 LEU n 2 113 ARG n 2 114 ASP n 2 115 GLU n 2 116 LEU n 2 117 ASP n 2 118 GLY n 2 119 CYS n 2 120 ILE n 2 121 GLY n 2 122 CYS n 2 123 GLY n 2 124 CYS n 2 125 LEU n 2 126 SER n 2 127 ARG n 2 128 SER n 2 129 ASP n 2 130 CYS n 2 131 PRO n 2 132 LEU n 2 133 ARG n 2 134 ASN n 2 135 PRO n 2 136 GLY n 2 137 ASP n 2 138 ARG n 2 139 LEU n 2 140 GLY n 2 141 GLU n 2 142 GLU n 2 143 GLY n 2 144 THR n 2 145 GLY n 2 146 ALA n 2 147 ARG n 2 148 LEU n 2 149 LEU n 2 150 GLU n 2 151 ASP n 2 152 GLU n 2 153 GLN n 2 154 ASN n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene soxR _entity_src_gen.gene_src_species 'Escherichia coli' _entity_src_gen.gene_src_strain K12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-3Xa _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 DTT non-polymer . 2,3-DIHYDROXY-1,4-DITHIOBUTANE 1,4-DITHIOTHREITOL 'C4 H10 O2 S2' 154.251 FES non-polymer . 'FE2/S2 (INORGANIC) CLUSTER' ? 'Fe2 S2' 175.820 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG B . n A 1 2 DC 2 2 2 DC DC B . n A 1 3 DC 3 3 3 DC DC B . n A 1 4 DT 4 4 4 DT DT B . n A 1 5 DC 5 5 5 DC DC B . n A 1 6 DA 6 6 6 DA DA B . n A 1 7 DA 7 7 7 DA DA B . n A 1 8 DG 8 8 8 DG DG B . n A 1 9 DT 9 9 9 DT DT B . n A 1 10 DT 10 10 10 DT DT B . n A 1 11 DA 11 11 11 DA DA B . n A 1 12 DA 12 12 12 DA DA B . n A 1 13 DC 13 13 13 DC DC B . n A 1 14 DT 14 14 14 DT DT B . n A 1 15 DT 15 15 15 DT DT B . n A 1 16 DG 16 16 16 DG DG B . n A 1 17 DA 17 17 17 DA DA B . n A 1 18 DG 18 18 18 DG DG B . n A 1 19 DG 19 19 19 DG DG B . n A 1 20 DC 20 20 20 DC DC B . n B 2 1 MET 1 1 ? ? ? A . n B 2 2 GLU 2 2 ? ? ? A . n B 2 3 LYS 3 3 ? ? ? A . n B 2 4 LYS 4 4 ? ? ? A . n B 2 5 LEU 5 5 ? ? ? A . n B 2 6 PRO 6 6 ? ? ? A . n B 2 7 ARG 7 7 ? ? ? A . n B 2 8 ILE 8 8 ? ? ? A . n B 2 9 LYS 9 9 ? ? ? A . n B 2 10 ALA 10 10 10 ALA ALA A . n B 2 11 LEU 11 11 11 LEU LEU A . n B 2 12 LEU 12 12 12 LEU LEU A . n B 2 13 THR 13 13 13 THR THR A . n B 2 14 PRO 14 14 14 PRO PRO A . n B 2 15 GLY 15 15 15 GLY GLY A . n B 2 16 GLU 16 16 16 GLU GLU A . n B 2 17 VAL 17 17 17 VAL VAL A . n B 2 18 ALA 18 18 18 ALA ALA A . n B 2 19 LYS 19 19 19 LYS ALA A . n B 2 20 ARG 20 20 20 ARG ARG A . n B 2 21 SER 21 21 21 SER SER A . n B 2 22 GLY 22 22 22 GLY GLY A . n B 2 23 VAL 23 23 23 VAL VAL A . n B 2 24 ALA 24 24 24 ALA ALA A . n B 2 25 VAL 25 25 25 VAL VAL A . n B 2 26 SER 26 26 26 SER SER A . n B 2 27 ALA 27 27 27 ALA ALA A . n B 2 28 LEU 28 28 28 LEU LEU A . n B 2 29 HIS 29 29 29 HIS HIS A . n B 2 30 PHE 30 30 30 PHE PHE A . n B 2 31 TYR 31 31 31 TYR TYR A . n B 2 32 GLU 32 32 32 GLU GLU A . n B 2 33 SER 33 33 33 SER SER A . n B 2 34 LYS 34 34 34 LYS LYS A . n B 2 35 GLY 35 35 35 GLY GLY A . n B 2 36 LEU 36 36 36 LEU LEU A . n B 2 37 ILE 37 37 37 ILE ILE A . n B 2 38 THR 38 38 38 THR THR A . n B 2 39 SER 39 39 39 SER SER A . n B 2 40 ILE 40 40 40 ILE ILE A . n B 2 41 ARG 41 41 41 ARG ARG A . n B 2 42 ASN 42 42 42 ASN ASN A . n B 2 43 SER 43 43 43 SER SER A . n B 2 44 GLY 44 44 44 GLY GLY A . n B 2 45 ASN 45 45 45 ASN ASN A . n B 2 46 GLN 46 46 46 GLN GLN A . n B 2 47 ARG 47 47 47 ARG ARG A . n B 2 48 ARG 48 48 48 ARG ARG A . n B 2 49 TYR 49 49 49 TYR TYR A . n B 2 50 LYS 50 50 50 LYS LYS A . n B 2 51 ARG 51 51 51 ARG ARG A . n B 2 52 ASP 52 52 52 ASP ASP A . n B 2 53 VAL 53 53 53 VAL VAL A . n B 2 54 LEU 54 54 54 LEU LEU A . n B 2 55 ARG 55 55 55 ARG ARG A . n B 2 56 TYR 56 56 56 TYR TYR A . n B 2 57 VAL 57 57 57 VAL VAL A . n B 2 58 ALA 58 58 58 ALA ALA A . n B 2 59 ILE 59 59 59 ILE ILE A . n B 2 60 ILE 60 60 60 ILE ILE A . n B 2 61 LYS 61 61 61 LYS LYS A . n B 2 62 ILE 62 62 62 ILE ILE A . n B 2 63 ALA 63 63 63 ALA ALA A . n B 2 64 GLN 64 64 64 GLN GLN A . n B 2 65 ARG 65 65 65 ARG ARG A . n B 2 66 ILE 66 66 66 ILE ILE A . n B 2 67 GLY 67 67 67 GLY GLY A . n B 2 68 ILE 68 68 68 ILE ILE A . n B 2 69 PRO 69 69 69 PRO PRO A . n B 2 70 LEU 70 70 70 LEU LEU A . n B 2 71 ALA 71 71 71 ALA ALA A . n B 2 72 THR 72 72 72 THR THR A . n B 2 73 ILE 73 73 73 ILE ILE A . n B 2 74 GLY 74 74 74 GLY GLY A . n B 2 75 GLU 75 75 75 GLU GLU A . n B 2 76 ALA 76 76 76 ALA ALA A . n B 2 77 PHE 77 77 77 PHE PHE A . n B 2 78 GLY 78 78 78 GLY GLY A . n B 2 79 VAL 79 79 79 VAL VAL A . n B 2 80 LEU 80 80 ? ? ? A . n B 2 81 PRO 81 81 ? ? ? A . n B 2 82 GLU 82 82 ? ? ? A . n B 2 83 GLY 83 83 ? ? ? A . n B 2 84 HIS 84 84 ? ? ? A . n B 2 85 THR 85 85 85 THR ALA A . n B 2 86 LEU 86 86 86 LEU LEU A . n B 2 87 SER 87 87 87 SER SER A . n B 2 88 ALA 88 88 88 ALA ALA A . n B 2 89 LYS 89 89 89 LYS ALA A . n B 2 90 GLU 90 90 90 GLU ALA A . n B 2 91 TRP 91 91 91 TRP TRP A . n B 2 92 LYS 92 92 92 LYS ALA A . n B 2 93 GLN 93 93 93 GLN ALA A . n B 2 94 LEU 94 94 94 LEU LEU A . n B 2 95 SER 95 95 95 SER SER A . n B 2 96 SER 96 96 96 SER SER A . n B 2 97 GLN 97 97 97 GLN GLN A . n B 2 98 TRP 98 98 98 TRP TRP A . n B 2 99 ARG 99 99 99 ARG ARG A . n B 2 100 GLU 100 100 100 GLU GLU A . n B 2 101 GLU 101 101 101 GLU GLU A . n B 2 102 LEU 102 102 102 LEU LEU A . n B 2 103 ASP 103 103 103 ASP ASP A . n B 2 104 ARG 104 104 104 ARG ALA A . n B 2 105 ARG 105 105 105 ARG ARG A . n B 2 106 ILE 106 106 106 ILE ILE A . n B 2 107 HIS 107 107 107 HIS HIS A . n B 2 108 THR 108 108 108 THR THR A . n B 2 109 LEU 109 109 109 LEU LEU A . n B 2 110 VAL 110 110 110 VAL VAL A . n B 2 111 ALA 111 111 111 ALA ALA A . n B 2 112 LEU 112 112 112 LEU LEU A . n B 2 113 ARG 113 113 113 ARG ARG A . n B 2 114 ASP 114 114 114 ASP ASP A . n B 2 115 GLU 115 115 115 GLU GLU A . n B 2 116 LEU 116 116 116 LEU LEU A . n B 2 117 ASP 117 117 117 ASP ASP A . n B 2 118 GLY 118 118 118 GLY GLY A . n B 2 119 CYS 119 119 119 CYS CYS A . n B 2 120 ILE 120 120 120 ILE ILE A . n B 2 121 GLY 121 121 121 GLY GLY A . n B 2 122 CYS 122 122 122 CYS CYS A . n B 2 123 GLY 123 123 123 GLY GLY A . n B 2 124 CYS 124 124 124 CYS CYS A . n B 2 125 LEU 125 125 125 LEU LEU A . n B 2 126 SER 126 126 126 SER ALA A . n B 2 127 ARG 127 127 127 ARG ARG A . n B 2 128 SER 128 128 128 SER ALA A . n B 2 129 ASP 129 129 129 ASP ASP A . n B 2 130 CYS 130 130 130 CYS CYS A . n B 2 131 PRO 131 131 131 PRO PRO A . n B 2 132 LEU 132 132 132 LEU LEU A . n B 2 133 ARG 133 133 133 ARG ARG A . n B 2 134 ASN 134 134 134 ASN ASN A . n B 2 135 PRO 135 135 135 PRO PRO A . n B 2 136 GLY 136 136 ? ? ? A . n B 2 137 ASP 137 137 ? ? ? A . n B 2 138 ARG 138 138 ? ? ? A . n B 2 139 LEU 139 139 ? ? ? A . n B 2 140 GLY 140 140 ? ? ? A . n B 2 141 GLU 141 141 ? ? ? A . n B 2 142 GLU 142 142 ? ? ? A . n B 2 143 GLY 143 143 ? ? ? A . n B 2 144 THR 144 144 ? ? ? A . n B 2 145 GLY 145 145 ? ? ? A . n B 2 146 ALA 146 146 ? ? ? A . n B 2 147 ARG 147 147 ? ? ? A . n B 2 148 LEU 148 148 ? ? ? A . n B 2 149 LEU 149 149 ? ? ? A . n B 2 150 GLU 150 150 ? ? ? A . n B 2 151 ASP 151 151 ? ? ? A . n B 2 152 GLU 152 152 ? ? ? A . n B 2 153 GLN 153 153 ? ? ? A . n B 2 154 ASN 154 154 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 FES 1 501 501 FES FES A . D 4 DTT 1 901 901 DTT DTT A . E 5 GOL 1 801 801 GOL GOL A . F 6 HOH 1 21 5 HOH HOH B . F 6 HOH 2 22 7 HOH HOH B . F 6 HOH 3 23 12 HOH HOH B . F 6 HOH 4 24 13 HOH HOH B . F 6 HOH 5 25 18 HOH HOH B . F 6 HOH 6 26 19 HOH HOH B . F 6 HOH 7 27 26 HOH HOH B . F 6 HOH 8 28 29 HOH HOH B . F 6 HOH 9 29 34 HOH HOH B . F 6 HOH 10 30 44 HOH HOH B . F 6 HOH 11 31 51 HOH HOH B . G 6 HOH 1 902 1 HOH HOH A . G 6 HOH 2 903 3 HOH HOH A . G 6 HOH 3 904 15 HOH HOH A . G 6 HOH 4 905 24 HOH HOH A . G 6 HOH 5 906 28 HOH HOH A . G 6 HOH 6 907 30 HOH HOH A . G 6 HOH 7 908 31 HOH HOH A . G 6 HOH 8 909 32 HOH HOH A . G 6 HOH 9 910 33 HOH HOH A . G 6 HOH 10 911 52 HOH HOH A . G 6 HOH 11 912 61 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 19 ? CG ? B LYS 19 CG 2 1 Y 1 A LYS 19 ? CD ? B LYS 19 CD 3 1 Y 1 A LYS 19 ? CE ? B LYS 19 CE 4 1 Y 1 A LYS 19 ? NZ ? B LYS 19 NZ 5 1 Y 1 A THR 85 ? OG1 ? B THR 85 OG1 6 1 Y 1 A THR 85 ? CG2 ? B THR 85 CG2 7 1 Y 1 A LYS 89 ? CG ? B LYS 89 CG 8 1 Y 1 A LYS 89 ? CD ? B LYS 89 CD 9 1 Y 1 A LYS 89 ? CE ? B LYS 89 CE 10 1 Y 1 A LYS 89 ? NZ ? B LYS 89 NZ 11 1 Y 1 A GLU 90 ? CG ? B GLU 90 CG 12 1 Y 1 A GLU 90 ? CD ? B GLU 90 CD 13 1 Y 1 A GLU 90 ? OE1 ? B GLU 90 OE1 14 1 Y 1 A GLU 90 ? OE2 ? B GLU 90 OE2 15 1 Y 1 A LYS 92 ? CG ? B LYS 92 CG 16 1 Y 1 A LYS 92 ? CD ? B LYS 92 CD 17 1 Y 1 A LYS 92 ? CE ? B LYS 92 CE 18 1 Y 1 A LYS 92 ? NZ ? B LYS 92 NZ 19 1 Y 1 A GLN 93 ? CG ? B GLN 93 CG 20 1 Y 1 A GLN 93 ? CD ? B GLN 93 CD 21 1 Y 1 A GLN 93 ? OE1 ? B GLN 93 OE1 22 1 Y 1 A GLN 93 ? NE2 ? B GLN 93 NE2 23 1 Y 1 A ARG 104 ? CG ? B ARG 104 CG 24 1 Y 1 A ARG 104 ? CD ? B ARG 104 CD 25 1 Y 1 A ARG 104 ? NE ? B ARG 104 NE 26 1 Y 1 A ARG 104 ? CZ ? B ARG 104 CZ 27 1 Y 1 A ARG 104 ? NH1 ? B ARG 104 NH1 28 1 Y 1 A ARG 104 ? NH2 ? B ARG 104 NH2 29 1 Y 1 A SER 126 ? OG ? B SER 126 OG 30 1 Y 1 A SER 128 ? OG ? B SER 128 OG # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 SOLVE phasing . ? 5 # _cell.entry_id 2ZHG _cell.length_a 53.374 _cell.length_b 53.374 _cell.length_c 355.159 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2ZHG _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2ZHG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 8 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.13 _exptl_crystal.density_percent_sol 60.73 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.8 _exptl_crystal_grow.pdbx_details '50mM Bis-Tris pH 6.6-6.8, 0.3M K/Na tartrate, 15% (w/v) PEG 10000, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 Bis-Tris ? ? ? 1 2 1 'K/Na tartrate' ? ? ? 1 3 1 'PEG 10000' ? ? ? 1 4 1 HOH ? ? ? 1 5 2 Bis-Tris ? ? ? 1 6 2 'K/Na tartrate' ? ? ? 1 7 2 'PEG 10000' ? ? ? 1 8 2 HOH ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2006-06-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL44B2' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL44B2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 2ZHG _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.80 _reflns.number_obs 7602 _reflns.number_all 7602 _reflns.percent_possible_obs 91.1 _reflns.pdbx_Rmerge_I_obs 0.104 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.0 _reflns.B_iso_Wilson_estimate 36.2 _reflns.pdbx_redundancy 5.6 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.80 _reflns_shell.d_res_low 2.93 _reflns_shell.percent_possible_all 58.4 _reflns_shell.Rmerge_I_obs 0.459 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2ZHG _refine.ls_number_reflns_obs 7518 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1347236.98 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.94 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 91.6 _refine.ls_R_factor_obs 0.243 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.243 _refine.ls_R_factor_R_free 0.281 _refine.ls_R_factor_R_free_error 0.013 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 6.1 _refine.ls_number_reflns_R_free 455 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 84.4 _refine.aniso_B[1][1] 21.81 _refine.aniso_B[2][2] 21.81 _refine.aniso_B[3][3] -43.63 _refine.aniso_B[1][2] 23.10 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.304542 _refine.solvent_model_param_bsol 44.5842 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model isotropic _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2ZHG _refine_analyze.Luzzati_coordinate_error_obs 0.49 _refine_analyze.Luzzati_sigma_a_obs 0.78 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.60 _refine_analyze.Luzzati_sigma_a_free 0.83 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 914 _refine_hist.pdbx_number_atoms_nucleic_acid 407 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.number_atoms_solvent 22 _refine_hist.number_atoms_total 1361 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 19.94 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 20.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.31 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 9.92 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 10.05 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 8.59 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 10.55 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.80 _refine_ls_shell.d_res_low 2.97 _refine_ls_shell.number_reflns_R_work 729 _refine_ls_shell.R_factor_R_work 0.451 _refine_ls_shell.percent_reflns_obs 59.8 _refine_ls_shell.R_factor_R_free 0.471 _refine_ls_shell.R_factor_R_free_error 0.066 _refine_ls_shell.percent_reflns_R_free 6.5 _refine_ls_shell.number_reflns_R_free 51 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' 3 dna-rna_rep.param dna-rna.top 'X-RAY DIFFRACTION' 4 li4.param li4.top 'X-RAY DIFFRACTION' 5 fes.par5 fes.top2 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 2ZHG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2ZHG _struct.title 'Crystal structure of SoxR in complex with DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2ZHG _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text ;oxidative stress, MerR family, Activator, DNA-binding, Iron, Iron-sulfur, Metal-binding, Transcription, Transcription regulation, TRANSCRIPTION-DNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP SOXR_ECOLI P0ACS2 2 ;MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSGNQRRYKRDVLRYVAIIKIAQRIGIPLATIGEAFGVL PEGHTLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN ; 1 ? 2 PDB 2ZHG 2ZHG 1 GCCTCAAGTTAACTTGAGGC ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2ZHG A 1 ? 154 ? P0ACS2 1 ? 154 ? 1 154 2 2 2ZHG B 1 ? 20 ? 2ZHG 1 ? 20 ? 1 20 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9090 ? 1 MORE -85.2 ? 1 'SSA (A^2)' 17490 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_554 -y,-x,-z-1/6 0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -59.1931666667 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR B 13 ? GLY B 22 ? THR A 13 GLY A 22 1 ? 10 HELX_P HELX_P2 2 ALA B 24 ? LYS B 34 ? ALA A 24 LYS A 34 1 ? 11 HELX_P HELX_P3 3 ASP B 52 ? GLY B 67 ? ASP A 52 GLY A 67 1 ? 16 HELX_P HELX_P4 4 PRO B 69 ? GLY B 78 ? PRO A 69 GLY A 78 1 ? 10 HELX_P HELX_P5 5 SER B 87 ? ILE B 120 ? SER A 87 ILE A 120 1 ? 34 HELX_P HELX_P6 6 SER B 126 ? CYS B 130 ? SER A 126 CYS A 130 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B CYS 119 SG ? ? ? 1_555 C FES . FE2 ? ? A CYS 119 A FES 501 1_555 ? ? ? ? ? ? ? 2.270 ? ? metalc2 metalc ? ? B CYS 122 SG ? ? ? 1_555 C FES . FE1 ? ? A CYS 122 A FES 501 1_555 ? ? ? ? ? ? ? 2.238 ? ? metalc3 metalc ? ? B CYS 124 SG ? ? ? 1_555 C FES . FE1 ? ? A CYS 124 A FES 501 1_555 ? ? ? ? ? ? ? 2.287 ? ? metalc4 metalc ? ? B CYS 130 SG ? ? ? 1_555 C FES . FE2 ? ? A CYS 130 A FES 501 1_555 ? ? ? ? ? ? ? 2.284 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DC 20 N3 ? ? B DG 1 B DC 20 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DC 20 O2 ? ? B DG 1 B DC 20 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DC 20 N4 ? ? B DG 1 B DC 20 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 A DG 19 N1 ? ? B DC 2 B DG 19 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 A DG 19 O6 ? ? B DC 2 B DG 19 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 A DG 19 N2 ? ? B DC 2 B DG 19 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 A DG 18 N1 ? ? B DC 3 B DG 18 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 A DG 18 O6 ? ? B DC 3 B DG 18 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 A DG 18 N2 ? ? B DC 3 B DG 18 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 N3 ? ? ? 1_555 A DA 17 N1 ? ? B DT 4 B DA 17 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 4 O4 ? ? ? 1_555 A DA 17 N6 ? ? B DT 4 B DA 17 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N3 ? ? ? 1_555 A DG 16 N1 ? ? B DC 5 B DG 16 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N4 ? ? ? 1_555 A DG 16 O6 ? ? B DC 5 B DG 16 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 O2 ? ? ? 1_555 A DG 16 N2 ? ? B DC 5 B DG 16 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 6 N1 ? ? ? 1_555 A DT 15 N3 ? ? B DA 6 B DT 15 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 6 N6 ? ? ? 1_555 A DT 15 O4 ? ? B DA 6 B DT 15 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 7 N1 ? ? ? 1_555 A DT 14 N3 ? ? B DA 7 B DT 14 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 7 N6 ? ? ? 1_555 A DT 14 O4 ? ? B DA 7 B DT 14 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DC 13 N3 ? ? B DG 8 B DC 13 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DC 13 O2 ? ? B DG 8 B DC 13 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 8 O6 ? ? ? 1_555 A DC 13 N4 ? ? B DG 8 B DC 13 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 9 N3 ? ? ? 1_555 A DA 12 N1 ? ? B DT 9 B DA 12 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 9 O4 ? ? ? 1_555 A DA 12 N6 ? ? B DT 9 B DA 12 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 10 N3 ? ? ? 1_555 A DA 11 N1 ? ? B DT 10 B DA 11 10_554 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog25 hydrog ? ? A DA 11 N1 ? ? ? 1_555 A DT 10 N3 ? ? B DA 11 B DT 10 10_554 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog26 hydrog ? ? A DA 12 N1 ? ? ? 1_555 A DT 9 N3 ? ? B DA 12 B DT 9 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DA 12 N6 ? ? ? 1_555 A DT 9 O4 ? ? B DA 12 B DT 9 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 13 N3 ? ? ? 1_555 A DG 8 N1 ? ? B DC 13 B DG 8 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 13 N4 ? ? ? 1_555 A DG 8 O6 ? ? B DC 13 B DG 8 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 13 O2 ? ? ? 1_555 A DG 8 N2 ? ? B DC 13 B DG 8 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DT 14 N3 ? ? ? 1_555 A DA 7 N1 ? ? B DT 14 B DA 7 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DT 14 O4 ? ? ? 1_555 A DA 7 N6 ? ? B DT 14 B DA 7 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DT 15 N3 ? ? ? 1_555 A DA 6 N1 ? ? B DT 15 B DA 6 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DT 15 O4 ? ? ? 1_555 A DA 6 N6 ? ? B DT 15 B DA 6 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DG 16 N1 ? ? ? 1_555 A DC 5 N3 ? ? B DG 16 B DC 5 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DG 16 N2 ? ? ? 1_555 A DC 5 O2 ? ? B DG 16 B DC 5 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DG 16 O6 ? ? ? 1_555 A DC 5 N4 ? ? B DG 16 B DC 5 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DA 17 N1 ? ? ? 1_555 A DT 4 N3 ? ? B DA 17 B DT 4 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DA 17 N6 ? ? ? 1_555 A DT 4 O4 ? ? B DA 17 B DT 4 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DG 18 N1 ? ? ? 1_555 A DC 3 N3 ? ? B DG 18 B DC 3 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DG 18 N2 ? ? ? 1_555 A DC 3 O2 ? ? B DG 18 B DC 3 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DG 18 O6 ? ? ? 1_555 A DC 3 N4 ? ? B DG 18 B DC 3 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DG 19 N1 ? ? ? 1_555 A DC 2 N3 ? ? B DG 19 B DC 2 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DG 19 N2 ? ? ? 1_555 A DC 2 O2 ? ? B DG 19 B DC 2 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DG 19 O6 ? ? ? 1_555 A DC 2 N4 ? ? B DG 19 B DC 2 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DC 20 N3 ? ? ? 1_555 A DG 1 N1 ? ? B DC 20 B DG 1 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A DC 20 N4 ? ? ? 1_555 A DG 1 O6 ? ? B DC 20 B DG 1 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A DC 20 O2 ? ? ? 1_555 A DG 1 N2 ? ? B DC 20 B DG 1 10_554 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? B CYS 119 ? A CYS 119 ? 1_555 FE2 ? C FES . ? A FES 501 ? 1_555 S1 ? C FES . ? A FES 501 ? 1_555 97.9 ? 2 SG ? B CYS 119 ? A CYS 119 ? 1_555 FE2 ? C FES . ? A FES 501 ? 1_555 S2 ? C FES . ? A FES 501 ? 1_555 127.9 ? 3 S1 ? C FES . ? A FES 501 ? 1_555 FE2 ? C FES . ? A FES 501 ? 1_555 S2 ? C FES . ? A FES 501 ? 1_555 103.8 ? 4 SG ? B CYS 119 ? A CYS 119 ? 1_555 FE2 ? C FES . ? A FES 501 ? 1_555 SG ? B CYS 130 ? A CYS 130 ? 1_555 102.9 ? 5 S1 ? C FES . ? A FES 501 ? 1_555 FE2 ? C FES . ? A FES 501 ? 1_555 SG ? B CYS 130 ? A CYS 130 ? 1_555 128.0 ? 6 S2 ? C FES . ? A FES 501 ? 1_555 FE2 ? C FES . ? A FES 501 ? 1_555 SG ? B CYS 130 ? A CYS 130 ? 1_555 99.8 ? 7 SG ? B CYS 122 ? A CYS 122 ? 1_555 FE1 ? C FES . ? A FES 501 ? 1_555 S1 ? C FES . ? A FES 501 ? 1_555 100.1 ? 8 SG ? B CYS 122 ? A CYS 122 ? 1_555 FE1 ? C FES . ? A FES 501 ? 1_555 S2 ? C FES . ? A FES 501 ? 1_555 129.7 ? 9 S1 ? C FES . ? A FES 501 ? 1_555 FE1 ? C FES . ? A FES 501 ? 1_555 S2 ? C FES . ? A FES 501 ? 1_555 103.7 ? 10 SG ? B CYS 122 ? A CYS 122 ? 1_555 FE1 ? C FES . ? A FES 501 ? 1_555 SG ? B CYS 124 ? A CYS 124 ? 1_555 100.3 ? 11 S1 ? C FES . ? A FES 501 ? 1_555 FE1 ? C FES . ? A FES 501 ? 1_555 SG ? B CYS 124 ? A CYS 124 ? 1_555 129.9 ? 12 S2 ? C FES . ? A FES 501 ? 1_555 FE1 ? C FES . ? A FES 501 ? 1_555 SG ? B CYS 124 ? A CYS 124 ? 1_555 97.3 ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE B 40 ? ARG B 41 ? ILE A 40 ARG A 41 A 2 ARG B 47 ? ARG B 48 ? ARG A 47 ARG A 48 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ILE _pdbx_struct_sheet_hbond.range_1_label_asym_id B _pdbx_struct_sheet_hbond.range_1_label_seq_id 40 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 40 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ARG _pdbx_struct_sheet_hbond.range_2_label_asym_id B _pdbx_struct_sheet_hbond.range_2_label_seq_id 48 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ARG _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 48 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A FES 501 ? 6 'BINDING SITE FOR RESIDUE FES A 501' AC2 Software A DTT 901 ? 1 'BINDING SITE FOR RESIDUE DTT A 901' AC3 Software A GOL 801 ? 4 'BINDING SITE FOR RESIDUE GOL A 801' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 CYS B 119 ? CYS A 119 . ? 1_555 ? 2 AC1 6 CYS B 122 ? CYS A 122 . ? 1_555 ? 3 AC1 6 GLY B 123 ? GLY A 123 . ? 1_555 ? 4 AC1 6 CYS B 124 ? CYS A 124 . ? 1_555 ? 5 AC1 6 LEU B 125 ? LEU A 125 . ? 1_555 ? 6 AC1 6 CYS B 130 ? CYS A 130 . ? 1_555 ? 7 AC2 1 HIS B 107 ? HIS A 107 . ? 1_555 ? 8 AC3 4 ARG B 20 ? ARG A 20 . ? 10_554 ? 9 AC3 4 LEU B 54 ? LEU A 54 . ? 10_554 ? 10 AC3 4 ARG B 127 ? ARG A 127 . ? 1_555 ? 11 AC3 4 ARG B 133 ? ARG A 133 . ? 1_555 ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 DG _pdbx_validate_rmsd_angle.auth_seq_id_1 19 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 DG _pdbx_validate_rmsd_angle.auth_seq_id_2 19 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N9 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 DG _pdbx_validate_rmsd_angle.auth_seq_id_3 19 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 110.16 _pdbx_validate_rmsd_angle.angle_target_value 108.30 _pdbx_validate_rmsd_angle.angle_deviation 1.86 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 45 ? ? 56.63 -0.87 2 1 ARG A 51 ? ? -12.48 -49.61 3 1 ASP A 52 ? ? -37.09 -35.39 4 1 CYS A 122 ? ? -103.95 -97.50 5 1 SER A 128 ? ? -73.99 22.17 6 1 ASP A 129 ? ? -154.60 0.32 7 1 LEU A 132 ? ? -32.57 -34.61 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG B 1 ? ? 0.061 'SIDE CHAIN' 2 1 DC B 2 ? ? 0.075 'SIDE CHAIN' 3 1 DG B 19 ? ? 0.083 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? B MET 1 2 1 Y 1 A GLU 2 ? B GLU 2 3 1 Y 1 A LYS 3 ? B LYS 3 4 1 Y 1 A LYS 4 ? B LYS 4 5 1 Y 1 A LEU 5 ? B LEU 5 6 1 Y 1 A PRO 6 ? B PRO 6 7 1 Y 1 A ARG 7 ? B ARG 7 8 1 Y 1 A ILE 8 ? B ILE 8 9 1 Y 1 A LYS 9 ? B LYS 9 10 1 Y 1 A LEU 80 ? B LEU 80 11 1 Y 1 A PRO 81 ? B PRO 81 12 1 Y 1 A GLU 82 ? B GLU 82 13 1 Y 1 A GLY 83 ? B GLY 83 14 1 Y 1 A HIS 84 ? B HIS 84 15 1 Y 1 A GLY 136 ? B GLY 136 16 1 Y 1 A ASP 137 ? B ASP 137 17 1 Y 1 A ARG 138 ? B ARG 138 18 1 Y 1 A LEU 139 ? B LEU 139 19 1 Y 1 A GLY 140 ? B GLY 140 20 1 Y 1 A GLU 141 ? B GLU 141 21 1 Y 1 A GLU 142 ? B GLU 142 22 1 Y 1 A GLY 143 ? B GLY 143 23 1 Y 1 A THR 144 ? B THR 144 24 1 Y 1 A GLY 145 ? B GLY 145 25 1 Y 1 A ALA 146 ? B ALA 146 26 1 Y 1 A ARG 147 ? B ARG 147 27 1 Y 1 A LEU 148 ? B LEU 148 28 1 Y 1 A LEU 149 ? B LEU 149 29 1 Y 1 A GLU 150 ? B GLU 150 30 1 Y 1 A ASP 151 ? B ASP 151 31 1 Y 1 A GLU 152 ? B GLU 152 32 1 Y 1 A GLN 153 ? B GLN 153 33 1 Y 1 A ASN 154 ? B ASN 154 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 DTT S1 S N N 231 DTT C1 C N N 232 DTT C2 C N R 233 DTT O2 O N N 234 DTT C3 C N R 235 DTT O3 O N N 236 DTT C4 C N N 237 DTT S4 S N N 238 DTT HS1 H N N 239 DTT H11 H N N 240 DTT H12 H N N 241 DTT H2 H N N 242 DTT HO2 H N N 243 DTT H3 H N N 244 DTT HO3 H N N 245 DTT H41 H N N 246 DTT H42 H N N 247 DTT HS2 H N N 248 FES FE1 FE N N 249 FES FE2 FE N N 250 FES S1 S N N 251 FES S2 S N N 252 GLN N N N N 253 GLN CA C N S 254 GLN C C N N 255 GLN O O N N 256 GLN CB C N N 257 GLN CG C N N 258 GLN CD C N N 259 GLN OE1 O N N 260 GLN NE2 N N N 261 GLN OXT O N N 262 GLN H H N N 263 GLN H2 H N N 264 GLN HA H N N 265 GLN HB2 H N N 266 GLN HB3 H N N 267 GLN HG2 H N N 268 GLN HG3 H N N 269 GLN HE21 H N N 270 GLN HE22 H N N 271 GLN HXT H N N 272 GLU N N N N 273 GLU CA C N S 274 GLU C C N N 275 GLU O O N N 276 GLU CB C N N 277 GLU CG C N N 278 GLU CD C N N 279 GLU OE1 O N N 280 GLU OE2 O N N 281 GLU OXT O N N 282 GLU H H N N 283 GLU H2 H N N 284 GLU HA H N N 285 GLU HB2 H N N 286 GLU HB3 H N N 287 GLU HG2 H N N 288 GLU HG3 H N N 289 GLU HE2 H N N 290 GLU HXT H N N 291 GLY N N N N 292 GLY CA C N N 293 GLY C C N N 294 GLY O O N N 295 GLY OXT O N N 296 GLY H H N N 297 GLY H2 H N N 298 GLY HA2 H N N 299 GLY HA3 H N N 300 GLY HXT H N N 301 GOL C1 C N N 302 GOL O1 O N N 303 GOL C2 C N N 304 GOL O2 O N N 305 GOL C3 C N N 306 GOL O3 O N N 307 GOL H11 H N N 308 GOL H12 H N N 309 GOL HO1 H N N 310 GOL H2 H N N 311 GOL HO2 H N N 312 GOL H31 H N N 313 GOL H32 H N N 314 GOL HO3 H N N 315 HIS N N N N 316 HIS CA C N S 317 HIS C C N N 318 HIS O O N N 319 HIS CB C N N 320 HIS CG C Y N 321 HIS ND1 N Y N 322 HIS CD2 C Y N 323 HIS CE1 C Y N 324 HIS NE2 N Y N 325 HIS OXT O N N 326 HIS H H N N 327 HIS H2 H N N 328 HIS HA H N N 329 HIS HB2 H N N 330 HIS HB3 H N N 331 HIS HD1 H N N 332 HIS HD2 H N N 333 HIS HE1 H N N 334 HIS HE2 H N N 335 HIS HXT H N N 336 HOH O O N N 337 HOH H1 H N N 338 HOH H2 H N N 339 ILE N N N N 340 ILE CA C N S 341 ILE C C N N 342 ILE O O N N 343 ILE CB C N S 344 ILE CG1 C N N 345 ILE CG2 C N N 346 ILE CD1 C N N 347 ILE OXT O N N 348 ILE H H N N 349 ILE H2 H N N 350 ILE HA H N N 351 ILE HB H N N 352 ILE HG12 H N N 353 ILE HG13 H N N 354 ILE HG21 H N N 355 ILE HG22 H N N 356 ILE HG23 H N N 357 ILE HD11 H N N 358 ILE HD12 H N N 359 ILE HD13 H N N 360 ILE HXT H N N 361 LEU N N N N 362 LEU CA C N S 363 LEU C C N N 364 LEU O O N N 365 LEU CB C N N 366 LEU CG C N N 367 LEU CD1 C N N 368 LEU CD2 C N N 369 LEU OXT O N N 370 LEU H H N N 371 LEU H2 H N N 372 LEU HA H N N 373 LEU HB2 H N N 374 LEU HB3 H N N 375 LEU HG H N N 376 LEU HD11 H N N 377 LEU HD12 H N N 378 LEU HD13 H N N 379 LEU HD21 H N N 380 LEU HD22 H N N 381 LEU HD23 H N N 382 LEU HXT H N N 383 LYS N N N N 384 LYS CA C N S 385 LYS C C N N 386 LYS O O N N 387 LYS CB C N N 388 LYS CG C N N 389 LYS CD C N N 390 LYS CE C N N 391 LYS NZ N N N 392 LYS OXT O N N 393 LYS H H N N 394 LYS H2 H N N 395 LYS HA H N N 396 LYS HB2 H N N 397 LYS HB3 H N N 398 LYS HG2 H N N 399 LYS HG3 H N N 400 LYS HD2 H N N 401 LYS HD3 H N N 402 LYS HE2 H N N 403 LYS HE3 H N N 404 LYS HZ1 H N N 405 LYS HZ2 H N N 406 LYS HZ3 H N N 407 LYS HXT H N N 408 MET N N N N 409 MET CA C N S 410 MET C C N N 411 MET O O N N 412 MET CB C N N 413 MET CG C N N 414 MET SD S N N 415 MET CE C N N 416 MET OXT O N N 417 MET H H N N 418 MET H2 H N N 419 MET HA H N N 420 MET HB2 H N N 421 MET HB3 H N N 422 MET HG2 H N N 423 MET HG3 H N N 424 MET HE1 H N N 425 MET HE2 H N N 426 MET HE3 H N N 427 MET HXT H N N 428 PHE N N N N 429 PHE CA C N S 430 PHE C C N N 431 PHE O O N N 432 PHE CB C N N 433 PHE CG C Y N 434 PHE CD1 C Y N 435 PHE CD2 C Y N 436 PHE CE1 C Y N 437 PHE CE2 C Y N 438 PHE CZ C Y N 439 PHE OXT O N N 440 PHE H H N N 441 PHE H2 H N N 442 PHE HA H N N 443 PHE HB2 H N N 444 PHE HB3 H N N 445 PHE HD1 H N N 446 PHE HD2 H N N 447 PHE HE1 H N N 448 PHE HE2 H N N 449 PHE HZ H N N 450 PHE HXT H N N 451 PRO N N N N 452 PRO CA C N S 453 PRO C C N N 454 PRO O O N N 455 PRO CB C N N 456 PRO CG C N N 457 PRO CD C N N 458 PRO OXT O N N 459 PRO H H N N 460 PRO HA H N N 461 PRO HB2 H N N 462 PRO HB3 H N N 463 PRO HG2 H N N 464 PRO HG3 H N N 465 PRO HD2 H N N 466 PRO HD3 H N N 467 PRO HXT H N N 468 SER N N N N 469 SER CA C N S 470 SER C C N N 471 SER O O N N 472 SER CB C N N 473 SER OG O N N 474 SER OXT O N N 475 SER H H N N 476 SER H2 H N N 477 SER HA H N N 478 SER HB2 H N N 479 SER HB3 H N N 480 SER HG H N N 481 SER HXT H N N 482 THR N N N N 483 THR CA C N S 484 THR C C N N 485 THR O O N N 486 THR CB C N R 487 THR OG1 O N N 488 THR CG2 C N N 489 THR OXT O N N 490 THR H H N N 491 THR H2 H N N 492 THR HA H N N 493 THR HB H N N 494 THR HG1 H N N 495 THR HG21 H N N 496 THR HG22 H N N 497 THR HG23 H N N 498 THR HXT H N N 499 TRP N N N N 500 TRP CA C N S 501 TRP C C N N 502 TRP O O N N 503 TRP CB C N N 504 TRP CG C Y N 505 TRP CD1 C Y N 506 TRP CD2 C Y N 507 TRP NE1 N Y N 508 TRP CE2 C Y N 509 TRP CE3 C Y N 510 TRP CZ2 C Y N 511 TRP CZ3 C Y N 512 TRP CH2 C Y N 513 TRP OXT O N N 514 TRP H H N N 515 TRP H2 H N N 516 TRP HA H N N 517 TRP HB2 H N N 518 TRP HB3 H N N 519 TRP HD1 H N N 520 TRP HE1 H N N 521 TRP HE3 H N N 522 TRP HZ2 H N N 523 TRP HZ3 H N N 524 TRP HH2 H N N 525 TRP HXT H N N 526 TYR N N N N 527 TYR CA C N S 528 TYR C C N N 529 TYR O O N N 530 TYR CB C N N 531 TYR CG C Y N 532 TYR CD1 C Y N 533 TYR CD2 C Y N 534 TYR CE1 C Y N 535 TYR CE2 C Y N 536 TYR CZ C Y N 537 TYR OH O N N 538 TYR OXT O N N 539 TYR H H N N 540 TYR H2 H N N 541 TYR HA H N N 542 TYR HB2 H N N 543 TYR HB3 H N N 544 TYR HD1 H N N 545 TYR HD2 H N N 546 TYR HE1 H N N 547 TYR HE2 H N N 548 TYR HH H N N 549 TYR HXT H N N 550 VAL N N N N 551 VAL CA C N S 552 VAL C C N N 553 VAL O O N N 554 VAL CB C N N 555 VAL CG1 C N N 556 VAL CG2 C N N 557 VAL OXT O N N 558 VAL H H N N 559 VAL H2 H N N 560 VAL HA H N N 561 VAL HB H N N 562 VAL HG11 H N N 563 VAL HG12 H N N 564 VAL HG13 H N N 565 VAL HG21 H N N 566 VAL HG22 H N N 567 VAL HG23 H N N 568 VAL HXT H N N 569 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 DTT S1 C1 sing N N 232 DTT S1 HS1 sing N N 233 DTT C1 C2 sing N N 234 DTT C1 H11 sing N N 235 DTT C1 H12 sing N N 236 DTT C2 O2 sing N N 237 DTT C2 C3 sing N N 238 DTT C2 H2 sing N N 239 DTT O2 HO2 sing N N 240 DTT C3 O3 sing N N 241 DTT C3 C4 sing N N 242 DTT C3 H3 sing N N 243 DTT O3 HO3 sing N N 244 DTT C4 S4 sing N N 245 DTT C4 H41 sing N N 246 DTT C4 H42 sing N N 247 DTT S4 HS2 sing N N 248 FES FE1 S1 sing N N 249 FES FE1 S2 sing N N 250 FES FE2 S1 sing N N 251 FES FE2 S2 sing N N 252 GLN N CA sing N N 253 GLN N H sing N N 254 GLN N H2 sing N N 255 GLN CA C sing N N 256 GLN CA CB sing N N 257 GLN CA HA sing N N 258 GLN C O doub N N 259 GLN C OXT sing N N 260 GLN CB CG sing N N 261 GLN CB HB2 sing N N 262 GLN CB HB3 sing N N 263 GLN CG CD sing N N 264 GLN CG HG2 sing N N 265 GLN CG HG3 sing N N 266 GLN CD OE1 doub N N 267 GLN CD NE2 sing N N 268 GLN NE2 HE21 sing N N 269 GLN NE2 HE22 sing N N 270 GLN OXT HXT sing N N 271 GLU N CA sing N N 272 GLU N H sing N N 273 GLU N H2 sing N N 274 GLU CA C sing N N 275 GLU CA CB sing N N 276 GLU CA HA sing N N 277 GLU C O doub N N 278 GLU C OXT sing N N 279 GLU CB CG sing N N 280 GLU CB HB2 sing N N 281 GLU CB HB3 sing N N 282 GLU CG CD sing N N 283 GLU CG HG2 sing N N 284 GLU CG HG3 sing N N 285 GLU CD OE1 doub N N 286 GLU CD OE2 sing N N 287 GLU OE2 HE2 sing N N 288 GLU OXT HXT sing N N 289 GLY N CA sing N N 290 GLY N H sing N N 291 GLY N H2 sing N N 292 GLY CA C sing N N 293 GLY CA HA2 sing N N 294 GLY CA HA3 sing N N 295 GLY C O doub N N 296 GLY C OXT sing N N 297 GLY OXT HXT sing N N 298 GOL C1 O1 sing N N 299 GOL C1 C2 sing N N 300 GOL C1 H11 sing N N 301 GOL C1 H12 sing N N 302 GOL O1 HO1 sing N N 303 GOL C2 O2 sing N N 304 GOL C2 C3 sing N N 305 GOL C2 H2 sing N N 306 GOL O2 HO2 sing N N 307 GOL C3 O3 sing N N 308 GOL C3 H31 sing N N 309 GOL C3 H32 sing N N 310 GOL O3 HO3 sing N N 311 HIS N CA sing N N 312 HIS N H sing N N 313 HIS N H2 sing N N 314 HIS CA C sing N N 315 HIS CA CB sing N N 316 HIS CA HA sing N N 317 HIS C O doub N N 318 HIS C OXT sing N N 319 HIS CB CG sing N N 320 HIS CB HB2 sing N N 321 HIS CB HB3 sing N N 322 HIS CG ND1 sing Y N 323 HIS CG CD2 doub Y N 324 HIS ND1 CE1 doub Y N 325 HIS ND1 HD1 sing N N 326 HIS CD2 NE2 sing Y N 327 HIS CD2 HD2 sing N N 328 HIS CE1 NE2 sing Y N 329 HIS CE1 HE1 sing N N 330 HIS NE2 HE2 sing N N 331 HIS OXT HXT sing N N 332 HOH O H1 sing N N 333 HOH O H2 sing N N 334 ILE N CA sing N N 335 ILE N H sing N N 336 ILE N H2 sing N N 337 ILE CA C sing N N 338 ILE CA CB sing N N 339 ILE CA HA sing N N 340 ILE C O doub N N 341 ILE C OXT sing N N 342 ILE CB CG1 sing N N 343 ILE CB CG2 sing N N 344 ILE CB HB sing N N 345 ILE CG1 CD1 sing N N 346 ILE CG1 HG12 sing N N 347 ILE CG1 HG13 sing N N 348 ILE CG2 HG21 sing N N 349 ILE CG2 HG22 sing N N 350 ILE CG2 HG23 sing N N 351 ILE CD1 HD11 sing N N 352 ILE CD1 HD12 sing N N 353 ILE CD1 HD13 sing N N 354 ILE OXT HXT sing N N 355 LEU N CA sing N N 356 LEU N H sing N N 357 LEU N H2 sing N N 358 LEU CA C sing N N 359 LEU CA CB sing N N 360 LEU CA HA sing N N 361 LEU C O doub N N 362 LEU C OXT sing N N 363 LEU CB CG sing N N 364 LEU CB HB2 sing N N 365 LEU CB HB3 sing N N 366 LEU CG CD1 sing N N 367 LEU CG CD2 sing N N 368 LEU CG HG sing N N 369 LEU CD1 HD11 sing N N 370 LEU CD1 HD12 sing N N 371 LEU CD1 HD13 sing N N 372 LEU CD2 HD21 sing N N 373 LEU CD2 HD22 sing N N 374 LEU CD2 HD23 sing N N 375 LEU OXT HXT sing N N 376 LYS N CA sing N N 377 LYS N H sing N N 378 LYS N H2 sing N N 379 LYS CA C sing N N 380 LYS CA CB sing N N 381 LYS CA HA sing N N 382 LYS C O doub N N 383 LYS C OXT sing N N 384 LYS CB CG sing N N 385 LYS CB HB2 sing N N 386 LYS CB HB3 sing N N 387 LYS CG CD sing N N 388 LYS CG HG2 sing N N 389 LYS CG HG3 sing N N 390 LYS CD CE sing N N 391 LYS CD HD2 sing N N 392 LYS CD HD3 sing N N 393 LYS CE NZ sing N N 394 LYS CE HE2 sing N N 395 LYS CE HE3 sing N N 396 LYS NZ HZ1 sing N N 397 LYS NZ HZ2 sing N N 398 LYS NZ HZ3 sing N N 399 LYS OXT HXT sing N N 400 MET N CA sing N N 401 MET N H sing N N 402 MET N H2 sing N N 403 MET CA C sing N N 404 MET CA CB sing N N 405 MET CA HA sing N N 406 MET C O doub N N 407 MET C OXT sing N N 408 MET CB CG sing N N 409 MET CB HB2 sing N N 410 MET CB HB3 sing N N 411 MET CG SD sing N N 412 MET CG HG2 sing N N 413 MET CG HG3 sing N N 414 MET SD CE sing N N 415 MET CE HE1 sing N N 416 MET CE HE2 sing N N 417 MET CE HE3 sing N N 418 MET OXT HXT sing N N 419 PHE N CA sing N N 420 PHE N H sing N N 421 PHE N H2 sing N N 422 PHE CA C sing N N 423 PHE CA CB sing N N 424 PHE CA HA sing N N 425 PHE C O doub N N 426 PHE C OXT sing N N 427 PHE CB CG sing N N 428 PHE CB HB2 sing N N 429 PHE CB HB3 sing N N 430 PHE CG CD1 doub Y N 431 PHE CG CD2 sing Y N 432 PHE CD1 CE1 sing Y N 433 PHE CD1 HD1 sing N N 434 PHE CD2 CE2 doub Y N 435 PHE CD2 HD2 sing N N 436 PHE CE1 CZ doub Y N 437 PHE CE1 HE1 sing N N 438 PHE CE2 CZ sing Y N 439 PHE CE2 HE2 sing N N 440 PHE CZ HZ sing N N 441 PHE OXT HXT sing N N 442 PRO N CA sing N N 443 PRO N CD sing N N 444 PRO N H sing N N 445 PRO CA C sing N N 446 PRO CA CB sing N N 447 PRO CA HA sing N N 448 PRO C O doub N N 449 PRO C OXT sing N N 450 PRO CB CG sing N N 451 PRO CB HB2 sing N N 452 PRO CB HB3 sing N N 453 PRO CG CD sing N N 454 PRO CG HG2 sing N N 455 PRO CG HG3 sing N N 456 PRO CD HD2 sing N N 457 PRO CD HD3 sing N N 458 PRO OXT HXT sing N N 459 SER N CA sing N N 460 SER N H sing N N 461 SER N H2 sing N N 462 SER CA C sing N N 463 SER CA CB sing N N 464 SER CA HA sing N N 465 SER C O doub N N 466 SER C OXT sing N N 467 SER CB OG sing N N 468 SER CB HB2 sing N N 469 SER CB HB3 sing N N 470 SER OG HG sing N N 471 SER OXT HXT sing N N 472 THR N CA sing N N 473 THR N H sing N N 474 THR N H2 sing N N 475 THR CA C sing N N 476 THR CA CB sing N N 477 THR CA HA sing N N 478 THR C O doub N N 479 THR C OXT sing N N 480 THR CB OG1 sing N N 481 THR CB CG2 sing N N 482 THR CB HB sing N N 483 THR OG1 HG1 sing N N 484 THR CG2 HG21 sing N N 485 THR CG2 HG22 sing N N 486 THR CG2 HG23 sing N N 487 THR OXT HXT sing N N 488 TRP N CA sing N N 489 TRP N H sing N N 490 TRP N H2 sing N N 491 TRP CA C sing N N 492 TRP CA CB sing N N 493 TRP CA HA sing N N 494 TRP C O doub N N 495 TRP C OXT sing N N 496 TRP CB CG sing N N 497 TRP CB HB2 sing N N 498 TRP CB HB3 sing N N 499 TRP CG CD1 doub Y N 500 TRP CG CD2 sing Y N 501 TRP CD1 NE1 sing Y N 502 TRP CD1 HD1 sing N N 503 TRP CD2 CE2 doub Y N 504 TRP CD2 CE3 sing Y N 505 TRP NE1 CE2 sing Y N 506 TRP NE1 HE1 sing N N 507 TRP CE2 CZ2 sing Y N 508 TRP CE3 CZ3 doub Y N 509 TRP CE3 HE3 sing N N 510 TRP CZ2 CH2 doub Y N 511 TRP CZ2 HZ2 sing N N 512 TRP CZ3 CH2 sing Y N 513 TRP CZ3 HZ3 sing N N 514 TRP CH2 HH2 sing N N 515 TRP OXT HXT sing N N 516 TYR N CA sing N N 517 TYR N H sing N N 518 TYR N H2 sing N N 519 TYR CA C sing N N 520 TYR CA CB sing N N 521 TYR CA HA sing N N 522 TYR C O doub N N 523 TYR C OXT sing N N 524 TYR CB CG sing N N 525 TYR CB HB2 sing N N 526 TYR CB HB3 sing N N 527 TYR CG CD1 doub Y N 528 TYR CG CD2 sing Y N 529 TYR CD1 CE1 sing Y N 530 TYR CD1 HD1 sing N N 531 TYR CD2 CE2 doub Y N 532 TYR CD2 HD2 sing N N 533 TYR CE1 CZ doub Y N 534 TYR CE1 HE1 sing N N 535 TYR CE2 CZ sing Y N 536 TYR CE2 HE2 sing N N 537 TYR CZ OH sing N N 538 TYR OH HH sing N N 539 TYR OXT HXT sing N N 540 VAL N CA sing N N 541 VAL N H sing N N 542 VAL N H2 sing N N 543 VAL CA C sing N N 544 VAL CA CB sing N N 545 VAL CA HA sing N N 546 VAL C O doub N N 547 VAL C OXT sing N N 548 VAL CB CG1 sing N N 549 VAL CB CG2 sing N N 550 VAL CB HB sing N N 551 VAL CG1 HG11 sing N N 552 VAL CG1 HG12 sing N N 553 VAL CG1 HG13 sing N N 554 VAL CG2 HG21 sing N N 555 VAL CG2 HG22 sing N N 556 VAL CG2 HG23 sing N N 557 VAL OXT HXT sing N N 558 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2ZHG 'double helix' 2ZHG 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 A DC 20 10_554 -0.763 -0.168 -0.486 -1.191 -2.384 -2.270 1 B_DG1:DC20_B B 1 ? B 20 ? 19 1 1 A DC 2 1_555 A DG 19 10_554 -0.440 -0.148 -0.719 4.013 -0.598 -10.238 2 B_DC2:DG19_B B 2 ? B 19 ? 19 1 1 A DC 3 1_555 A DG 18 10_554 -0.256 -0.053 -0.319 -5.665 -0.895 1.453 3 B_DC3:DG18_B B 3 ? B 18 ? 19 1 1 A DT 4 1_555 A DA 17 10_554 -0.216 -0.256 -0.215 -0.302 -6.186 2.682 4 B_DT4:DA17_B B 4 ? B 17 ? 20 1 1 A DC 5 1_555 A DG 16 10_554 -0.214 -0.003 -0.184 4.687 -7.483 5.622 5 B_DC5:DG16_B B 5 ? B 16 ? 19 1 1 A DA 6 1_555 A DT 15 10_554 0.043 -0.134 0.014 5.015 -6.782 -0.709 6 B_DA6:DT15_B B 6 ? B 15 ? 20 1 1 A DA 7 1_555 A DT 14 10_554 -0.025 -0.207 -0.175 5.794 -12.427 -0.867 7 B_DA7:DT14_B B 7 ? B 14 ? 20 1 1 A DG 8 1_555 A DC 13 10_554 -1.037 -0.267 0.025 -3.474 -9.444 -2.098 8 B_DG8:DC13_B B 8 ? B 13 ? 19 1 1 A DT 9 1_555 A DA 12 10_554 -0.444 -0.091 -0.047 0.927 -1.502 6.886 9 B_DT9:DA12_B B 9 ? B 12 ? 20 1 1 A DT 10 1_555 A DA 11 10_554 -1.424 -0.058 0.544 -5.230 -0.987 22.956 10 B_DT10:DA11_B B 10 ? B 11 ? ? ? 1 A DA 11 1_555 A DT 10 10_554 1.424 -0.058 0.544 5.230 -0.987 22.956 11 B_DA11:DT10_B B 11 ? B 10 ? ? ? 1 A DA 12 1_555 A DT 9 10_554 0.444 -0.091 -0.047 -0.927 -1.503 6.886 12 B_DA12:DT9_B B 12 ? B 9 ? 20 1 1 A DC 13 1_555 A DG 8 10_554 1.037 -0.267 0.025 3.474 -9.444 -2.098 13 B_DC13:DG8_B B 13 ? B 8 ? 19 1 1 A DT 14 1_555 A DA 7 10_554 0.025 -0.207 -0.175 -5.794 -12.427 -0.867 14 B_DT14:DA7_B B 14 ? B 7 ? 20 1 1 A DT 15 1_555 A DA 6 10_554 -0.043 -0.134 0.014 -5.015 -6.782 -0.709 15 B_DT15:DA6_B B 15 ? B 6 ? 20 1 1 A DG 16 1_555 A DC 5 10_554 0.214 -0.003 -0.184 -4.687 -7.483 5.622 16 B_DG16:DC5_B B 16 ? B 5 ? 19 1 1 A DA 17 1_555 A DT 4 10_554 0.216 -0.256 -0.215 0.302 -6.186 2.682 17 B_DA17:DT4_B B 17 ? B 4 ? 20 1 1 A DG 18 1_555 A DC 3 10_554 0.256 -0.053 -0.319 5.665 -0.895 1.454 18 B_DG18:DC3_B B 18 ? B 3 ? 19 1 1 A DG 19 1_555 A DC 2 10_554 0.440 -0.148 -0.719 -4.013 -0.598 -10.238 19 B_DG19:DC2_B B 19 ? B 2 ? 19 1 1 A DC 20 1_555 A DG 1 10_554 0.763 -0.168 -0.486 1.191 -2.384 -2.270 20 B_DC20:DG1_B B 20 ? B 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 A DC 20 10_554 A DC 2 1_555 A DG 19 10_554 -0.248 -0.847 3.199 -0.956 2.978 33.577 -1.928 0.277 3.120 5.141 1.650 33.718 1 BB_DG1DC2:DG19DC20_BB B 1 ? B 20 ? B 2 ? B 19 ? 1 A DC 2 1_555 A DG 19 10_554 A DC 3 1_555 A DG 18 10_554 0.051 -1.301 3.484 -3.694 11.937 31.032 -4.233 -0.699 2.785 21.263 6.580 33.396 2 BB_DC2DC3:DG18DG19_BB B 2 ? B 19 ? B 3 ? B 18 ? 1 A DC 3 1_555 A DG 18 10_554 A DT 4 1_555 A DA 17 10_554 -0.409 -0.666 3.207 0.785 8.816 29.609 -2.880 0.913 2.883 16.785 -1.494 30.875 3 BB_DC3DT4:DA17DG18_BB B 3 ? B 18 ? B 4 ? B 17 ? 1 A DT 4 1_555 A DA 17 10_554 A DC 5 1_555 A DG 16 10_554 0.569 0.197 3.218 1.130 4.761 31.223 -0.514 -0.838 3.230 8.778 -2.084 31.594 4 BB_DT4DC5:DG16DA17_BB B 4 ? B 17 ? B 5 ? B 16 ? 1 A DC 5 1_555 A DG 16 10_554 A DA 6 1_555 A DT 15 10_554 -0.652 -0.018 3.329 -1.214 0.760 36.223 -0.138 0.874 3.347 1.221 1.952 36.250 5 BB_DC5DA6:DT15DG16_BB B 5 ? B 16 ? B 6 ? B 15 ? 1 A DA 6 1_555 A DT 15 10_554 A DA 7 1_555 A DT 14 10_554 0.552 -0.616 3.224 3.438 -1.099 33.094 -0.893 -0.393 3.281 -1.922 -6.012 33.285 6 BB_DA6DA7:DT14DT15_BB B 6 ? B 15 ? B 7 ? B 14 ? 1 A DA 7 1_555 A DT 14 10_554 A DG 8 1_555 A DC 13 10_554 0.148 -0.733 3.476 -4.481 1.035 34.883 -1.376 -0.950 3.409 1.717 7.435 35.176 7 BB_DA7DG8:DC13DT14_BB B 7 ? B 14 ? B 8 ? B 13 ? 1 A DG 8 1_555 A DC 13 10_554 A DT 9 1_555 A DA 12 10_554 -0.543 -1.215 3.188 -0.544 4.633 27.085 -3.635 1.017 2.953 9.800 1.151 27.476 8 BB_DG8DT9:DA12DC13_BB B 8 ? B 13 ? B 9 ? B 12 ? 1 A DT 9 1_555 A DA 12 10_554 A DT 10 1_555 A DA 11 10_554 0.111 0.338 3.634 -4.240 19.173 22.173 -4.050 -1.259 2.942 40.995 9.066 29.537 9 BB_DT9DT10:DA11DA12_BB B 9 ? B 12 ? B 10 ? B 11 ? 1 A DT 10 1_555 A DA 11 10_554 A DA 11 1_555 A DT 10 10_554 0.000 1.186 3.119 0.000 13.467 43.861 0.342 0.000 3.326 17.544 0.000 45.784 10 BB_DT10DA11:DT10DA11_BB B 10 ? B 11 ? B 11 ? B 10 ? 1 A DA 11 1_555 A DT 10 10_554 A DA 12 1_555 A DT 9 10_554 -0.111 0.338 3.634 4.240 19.173 22.173 -4.050 1.259 2.942 40.995 -9.066 29.537 11 BB_DA11DA12:DT9DT10_BB B 11 ? B 10 ? B 12 ? B 9 ? 1 A DA 12 1_555 A DT 9 10_554 A DC 13 1_555 A DG 8 10_554 0.543 -1.215 3.188 0.544 4.633 27.085 -3.635 -1.017 2.953 9.800 -1.151 27.476 12 BB_DA12DC13:DG8DT9_BB B 12 ? B 9 ? B 13 ? B 8 ? 1 A DC 13 1_555 A DG 8 10_554 A DT 14 1_555 A DA 7 10_554 -0.148 -0.733 3.476 4.481 1.035 34.883 -1.376 0.950 3.409 1.717 -7.435 35.176 13 BB_DC13DT14:DA7DG8_BB B 13 ? B 8 ? B 14 ? B 7 ? 1 A DT 14 1_555 A DA 7 10_554 A DT 15 1_555 A DA 6 10_554 -0.552 -0.616 3.224 -3.438 -1.099 33.094 -0.893 0.393 3.281 -1.922 6.012 33.285 14 BB_DT14DT15:DA6DA7_BB B 14 ? B 7 ? B 15 ? B 6 ? 1 A DT 15 1_555 A DA 6 10_554 A DG 16 1_555 A DC 5 10_554 0.652 -0.018 3.329 1.214 0.759 36.223 -0.138 -0.874 3.347 1.221 -1.952 36.250 15 BB_DT15DG16:DC5DA6_BB B 15 ? B 6 ? B 16 ? B 5 ? 1 A DG 16 1_555 A DC 5 10_554 A DA 17 1_555 A DT 4 10_554 -0.569 0.197 3.218 -1.130 4.761 31.223 -0.514 0.838 3.230 8.778 2.084 31.594 16 BB_DG16DA17:DT4DC5_BB B 16 ? B 5 ? B 17 ? B 4 ? 1 A DA 17 1_555 A DT 4 10_554 A DG 18 1_555 A DC 3 10_554 0.409 -0.666 3.207 -0.785 8.816 29.609 -2.880 -0.913 2.883 16.785 1.494 30.875 17 BB_DA17DG18:DC3DT4_BB B 17 ? B 4 ? B 18 ? B 3 ? 1 A DG 18 1_555 A DC 3 10_554 A DG 19 1_555 A DC 2 10_554 -0.051 -1.301 3.484 3.694 11.937 31.031 -4.233 0.699 2.785 21.263 -6.580 33.396 18 BB_DG18DG19:DC2DC3_BB B 18 ? B 3 ? B 19 ? B 2 ? 1 A DG 19 1_555 A DC 2 10_554 A DC 20 1_555 A DG 1 10_554 0.248 -0.847 3.199 0.956 2.978 33.577 -1.928 -0.277 3.120 5.141 -1.650 33.718 19 BB_DG19DC20:DG1DC2_BB B 19 ? B 2 ? B 20 ? B 1 ? # _atom_sites.entry_id 2ZHG _atom_sites.fract_transf_matrix[1][1] 0.018736 _atom_sites.fract_transf_matrix[1][2] 0.010817 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021634 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.002816 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O P S # loop_