HEADER HYDROLASE 29-FEB-08 2ZJ5 TITLE ARCHAEAL DNA HELICASE HJM COMPLEXED WITH ADP IN FORM 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE SKI2-TYPE HELICASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DNA HELICASE; COMPND 5 EC: 3.6.1.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 3 ORGANISM_TAXID: 2261; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS RECA FOLD, ATP-BINDING, HELICASE, HYDROLASE, NUCLEOTIDE-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR T.OYAMA,H.OKA,R.FUJIKANE,Y.ISHINO,K.MORIKAWA REVDAT 2 01-NOV-23 2ZJ5 1 REMARK REVDAT 1 10-FEB-09 2ZJ5 0 JRNL AUTH T.OYAMA,H.OKA,K.MAYANAGI,T.SHIRAI,K.MATOBA,R.FUJIKANE, JRNL AUTH 2 Y.ISHINO,K.MORIKAWA JRNL TITL ATOMIC STRUCTURES AND FUNCTIONAL IMPLICATIONS OF THE JRNL TITL 2 ARCHAEAL RECQ-LIKE HELICASE HJM JRNL REF BMC STRUCT.BIOL. V. 9 2 2009 JRNL REFN ESSN 1472-6807 JRNL PMID 19159486 JRNL DOI 10.1186/1472-6807-9-2 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 306508.310 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 29773 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1463 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.008 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.55 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4481 REMARK 3 BIN R VALUE (WORKING SET) : 0.2660 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 234 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.022 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5373 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 52 REMARK 3 SOLVENT ATOMS : 113 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.81000 REMARK 3 B22 (A**2) : 6.64000 REMARK 3 B33 (A**2) : 1.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.31000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.29 REMARK 3 ESD FROM SIGMAA (A) : 0.28 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.43 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.43 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.820 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 15.210; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 14.160; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 16.390; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 15.970; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 55.48 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : ADP_XPLOR_PAR.PARAM REMARK 3 PARAMETER FILE 5 : SO4.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : ADP_XPLOR_TOP.TOP REMARK 3 TOPOLOGY FILE 5 : SO4.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2ZJ5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-MAR-08. REMARK 100 THE DEPOSITION ID IS D_1000028037. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-6B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30860 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.38400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 2ZJ2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M AMMONIUM SULFATE, 0.1M CITRATE, REMARK 280 PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 58.60250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.76750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 58.60250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 41.76750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 54180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -178.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 67.42605 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 82.13010 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 901 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 332 REMARK 465 GLY A 333 REMARK 465 ILE A 334 REMARK 465 ASN A 335 REMARK 465 THR A 336 REMARK 465 ILE A 556 REMARK 465 SER A 557 REMARK 465 GLY A 558 REMARK 465 TYR A 559 REMARK 465 ASP A 560 REMARK 465 PRO A 561 REMARK 465 TYR A 562 REMARK 465 LEU A 563 REMARK 465 GLY A 686 REMARK 465 ILE A 687 REMARK 465 GLY A 688 REMARK 465 VAL A 689 REMARK 465 LYS A 690 REMARK 465 THR A 691 REMARK 465 GLY A 700 REMARK 465 LYS A 701 REMARK 465 ASN A 702 REMARK 465 VAL A 703 REMARK 465 LYS A 704 REMARK 465 ILE A 705 REMARK 465 SER A 706 REMARK 465 GLU A 707 REMARK 465 LYS A 708 REMARK 465 PRO A 709 REMARK 465 ARG A 710 REMARK 465 LYS A 711 REMARK 465 SER A 712 REMARK 465 THR A 713 REMARK 465 LEU A 714 REMARK 465 ASP A 715 REMARK 465 TYR A 716 REMARK 465 PHE A 717 REMARK 465 LEU A 718 REMARK 465 LYS A 719 REMARK 465 SER A 720 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 2 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 7 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 22 CG CD OE1 OE2 REMARK 470 GLU A 83 CG CD OE1 OE2 REMARK 470 ARG A 153 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 202 CG CD CE NZ REMARK 470 LYS A 260 CG CD CE NZ REMARK 470 LYS A 267 CG CD CE NZ REMARK 470 GLU A 282 CG CD OE1 OE2 REMARK 470 TYR A 349 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER A 350 OG REMARK 470 ASP A 351 CG OD1 OD2 REMARK 470 LYS A 373 CG CD CE NZ REMARK 470 GLU A 474 CG CD OE1 OE2 REMARK 470 GLU A 504 CG CD OE1 OE2 REMARK 470 ARG A 533 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 536 CG CD OE1 OE2 REMARK 470 ARG A 537 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 552 CG OD1 OD2 REMARK 470 GLU A 564 CG CD OE1 OE2 REMARK 470 ARG A 565 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 650 CG CD OE1 NE2 REMARK 470 LEU A 653 CG CD1 CD2 REMARK 470 VAL A 654 CG1 CG2 REMARK 470 ASN A 664 CG OD1 ND2 REMARK 470 SER A 665 OG REMARK 470 PHE A 667 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE A 673 CG1 CG2 CD1 REMARK 470 SER A 674 OG REMARK 470 ARG A 677 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 679 CG CD OE1 OE2 REMARK 470 GLU A 680 CG CD OE1 OE2 REMARK 470 LEU A 682 CG CD1 CD2 REMARK 470 LYS A 683 CG CD CE NZ REMARK 470 ILE A 684 CG1 CG2 CD1 REMARK 470 GLU A 685 CG CD OE1 OE2 REMARK 470 GLU A 693 CG CD OE1 OE2 REMARK 470 PHE A 696 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 697 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 9 133.77 -37.08 REMARK 500 SER A 50 31.66 -97.62 REMARK 500 ASP A 90 6.50 -58.99 REMARK 500 ASP A 106 45.54 -85.10 REMARK 500 ASP A 109 58.34 33.98 REMARK 500 LEU A 149 -3.80 -58.20 REMARK 500 ASN A 181 58.94 -119.79 REMARK 500 GLN A 210 70.21 50.29 REMARK 500 LYS A 238 -162.77 -110.55 REMARK 500 ASN A 283 154.86 160.99 REMARK 500 PRO A 328 -71.03 -57.40 REMARK 500 LEU A 330 64.79 67.53 REMARK 500 MET A 354 136.82 -25.95 REMARK 500 PRO A 372 -29.78 -35.05 REMARK 500 VAL A 377 149.68 -174.07 REMARK 500 THR A 385 -60.46 -93.16 REMARK 500 ASN A 410 107.97 -47.78 REMARK 500 ASP A 448 90.19 -32.85 REMARK 500 GLU A 467 31.22 72.20 REMARK 500 ASP A 475 34.11 72.95 REMARK 500 ASP A 509 77.49 -155.23 REMARK 500 GLU A 536 -82.71 -61.99 REMARK 500 ASP A 552 -72.36 -60.88 REMARK 500 GLU A 591 -75.48 -74.53 REMARK 500 LYS A 592 1.68 -49.88 REMARK 500 TYR A 593 -6.11 -143.62 REMARK 500 ALA A 623 72.99 -69.10 REMARK 500 LEU A 648 0.68 -63.87 REMARK 500 VAL A 654 -67.71 179.63 REMARK 500 PHE A 667 155.60 -27.83 REMARK 500 ARG A 668 -13.86 -148.77 REMARK 500 GLN A 675 53.06 -143.52 REMARK 500 PRO A 678 -19.79 -48.19 REMARK 500 ILE A 684 -41.63 178.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 905 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 801 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ZJ2 RELATED DB: PDB REMARK 900 THE SAME PROTEIN REMARK 900 RELATED ID: 2ZJ8 RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN ANOTHER CRYSTAL FORM REMARK 900 RELATED ID: 2ZJA RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH AMPPCP DBREF 2ZJ5 A 1 720 UNP O73946 HELS_PYRFU 1 720 SEQRES 1 A 720 MET ARG VAL ASP GLU LEU ARG VAL ASP GLU ARG ILE LYS SEQRES 2 A 720 SER THR LEU LYS GLU ARG GLY ILE GLU SER PHE TYR PRO SEQRES 3 A 720 PRO GLN ALA GLU ALA LEU LYS SER GLY ILE LEU GLU GLY SEQRES 4 A 720 LYS ASN ALA LEU ILE SER ILE PRO THR ALA SER GLY LYS SEQRES 5 A 720 THR LEU ILE ALA GLU ILE ALA MET VAL HIS ARG ILE LEU SEQRES 6 A 720 THR GLN GLY GLY LYS ALA VAL TYR ILE VAL PRO LEU LYS SEQRES 7 A 720 ALA LEU ALA GLU GLU LYS PHE GLN GLU PHE GLN ASP TRP SEQRES 8 A 720 GLU LYS ILE GLY LEU ARG VAL ALA MET ALA THR GLY ASP SEQRES 9 A 720 TYR ASP SER LYS ASP GLU TRP LEU GLY LYS TYR ASP ILE SEQRES 10 A 720 ILE ILE ALA THR ALA GLU LYS PHE ASP SER LEU LEU ARG SEQRES 11 A 720 HIS GLY SER SER TRP ILE LYS ASP VAL LYS ILE LEU VAL SEQRES 12 A 720 ALA ASP GLU ILE HIS LEU ILE GLY SER ARG ASP ARG GLY SEQRES 13 A 720 ALA THR LEU GLU VAL ILE LEU ALA HIS MET LEU GLY LYS SEQRES 14 A 720 ALA GLN ILE ILE GLY LEU SER ALA THR ILE GLY ASN PRO SEQRES 15 A 720 GLU GLU LEU ALA GLU TRP LEU ASN ALA GLU LEU ILE VAL SEQRES 16 A 720 SER ASP TRP ARG PRO VAL LYS LEU ARG ARG GLY VAL PHE SEQRES 17 A 720 TYR GLN GLY PHE VAL THR TRP GLU ASP GLY SER ILE ASP SEQRES 18 A 720 ARG PHE SER SER TRP GLU GLU LEU VAL TYR ASP ALA ILE SEQRES 19 A 720 ARG LYS LYS LYS GLY ALA LEU ILE PHE VAL ASN MET ARG SEQRES 20 A 720 ARG LYS ALA GLU ARG VAL ALA LEU GLU LEU SER LYS LYS SEQRES 21 A 720 VAL LYS SER LEU LEU THR LYS PRO GLU ILE ARG ALA LEU SEQRES 22 A 720 ASN GLU LEU ALA ASP SER LEU GLU GLU ASN PRO THR ASN SEQRES 23 A 720 GLU LYS LEU ALA LYS ALA ILE ARG GLY GLY VAL ALA PHE SEQRES 24 A 720 HIS HIS ALA GLY LEU GLY ARG ASP GLU ARG VAL LEU VAL SEQRES 25 A 720 GLU GLU ASN PHE ARG LYS GLY ILE ILE LYS ALA VAL VAL SEQRES 26 A 720 ALA THR PRO THR LEU SER ALA GLY ILE ASN THR PRO ALA SEQRES 27 A 720 PHE ARG VAL ILE ILE ARG ASP ILE TRP ARG TYR SER ASP SEQRES 28 A 720 PHE GLY MET GLU ARG ILE PRO ILE ILE GLU VAL HIS GLN SEQRES 29 A 720 MET LEU GLY ARG ALA GLY ARG PRO LYS TYR ASP GLU VAL SEQRES 30 A 720 GLY GLU GLY ILE ILE VAL SER THR SER ASP ASP PRO ARG SEQRES 31 A 720 GLU VAL MET ASN HIS TYR ILE PHE GLY LYS PRO GLU LYS SEQRES 32 A 720 LEU PHE SER GLN LEU SER ASN GLU SER ASN LEU ARG SER SEQRES 33 A 720 GLN VAL LEU ALA LEU ILE ALA THR PHE GLY TYR SER THR SEQRES 34 A 720 VAL GLU GLU ILE LEU LYS PHE ILE SER ASN THR PHE TYR SEQRES 35 A 720 ALA TYR GLN ARG LYS ASP THR TYR SER LEU GLU GLU LYS SEQRES 36 A 720 ILE ARG ASN ILE LEU TYR PHE LEU LEU GLU ASN GLU PHE SEQRES 37 A 720 ILE GLU ILE SER LEU GLU ASP LYS ILE ARG PRO LEU SER SEQRES 38 A 720 LEU GLY ILE ARG THR ALA LYS LEU TYR ILE ASP PRO TYR SEQRES 39 A 720 THR ALA LYS MET PHE LYS ASP LYS MET GLU GLU VAL VAL SEQRES 40 A 720 LYS ASP PRO ASN PRO ILE GLY ILE PHE HIS LEU ILE SER SEQRES 41 A 720 LEU THR PRO ASP ILE THR PRO PHE ASN TYR SER LYS ARG SEQRES 42 A 720 GLU PHE GLU ARG LEU GLU GLU GLU TYR TYR GLU PHE LYS SEQRES 43 A 720 ASP ARG LEU TYR PHE ASP ASP PRO TYR ILE SER GLY TYR SEQRES 44 A 720 ASP PRO TYR LEU GLU ARG LYS PHE PHE ARG ALA PHE LYS SEQRES 45 A 720 THR ALA LEU VAL LEU LEU ALA TRP ILE ASN GLU VAL PRO SEQRES 46 A 720 GLU GLY GLU ILE VAL GLU LYS TYR SER VAL GLU PRO GLY SEQRES 47 A 720 ASP ILE TYR ARG ILE VAL GLU THR ALA GLU TRP LEU VAL SEQRES 48 A 720 TYR SER LEU LYS GLU ILE ALA LYS VAL LEU GLY ALA TYR SEQRES 49 A 720 GLU ILE VAL ASP TYR LEU GLU THR LEU ARG VAL ARG VAL SEQRES 50 A 720 LYS TYR GLY ILE ARG GLU GLU LEU ILE PRO LEU MET GLN SEQRES 51 A 720 LEU PRO LEU VAL GLY ARG ARG ARG ALA ARG ALA LEU TYR SEQRES 52 A 720 ASN SER GLY PHE ARG SER ILE GLU ASP ILE SER GLN ALA SEQRES 53 A 720 ARG PRO GLU GLU LEU LEU LYS ILE GLU GLY ILE GLY VAL SEQRES 54 A 720 LYS THR VAL GLU ALA ILE PHE LYS PHE LEU GLY LYS ASN SEQRES 55 A 720 VAL LYS ILE SER GLU LYS PRO ARG LYS SER THR LEU ASP SEQRES 56 A 720 TYR PHE LEU LYS SER HET SO4 A 901 5 HET SO4 A 902 5 HET SO4 A 903 5 HET SO4 A 904 5 HET SO4 A 905 5 HET ADP A 801 27 HETNAM SO4 SULFATE ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 2 SO4 5(O4 S 2-) FORMUL 7 ADP C10 H15 N5 O10 P2 FORMUL 8 HOH *113(H2 O) HELIX 1 1 ARG A 2 LEU A 6 5 5 HELIX 2 2 ASP A 9 ARG A 19 1 11 HELIX 3 3 TYR A 25 LYS A 33 1 9 HELIX 4 4 PRO A 47 SER A 50 5 4 HELIX 5 5 GLY A 51 GLY A 68 1 18 HELIX 6 6 LEU A 77 PHE A 88 1 12 HELIX 7 7 GLN A 89 GLY A 95 5 7 HELIX 8 8 ASP A 109 TYR A 115 5 7 HELIX 9 9 ALA A 122 GLY A 132 1 11 HELIX 10 10 SER A 133 LYS A 137 5 5 HELIX 11 11 ILE A 147 SER A 152 5 6 HELIX 12 12 ARG A 155 LEU A 167 1 13 HELIX 13 13 ASN A 181 LEU A 189 1 9 HELIX 14 14 TRP A 226 LYS A 236 1 11 HELIX 15 15 MET A 246 LYS A 262 1 17 HELIX 16 16 SER A 263 LEU A 265 5 3 HELIX 17 17 THR A 266 SER A 279 1 14 HELIX 18 18 ASN A 283 ARG A 294 1 12 HELIX 19 19 GLY A 305 LYS A 318 1 14 HELIX 20 20 PRO A 358 ARG A 368 1 11 HELIX 21 21 ASP A 388 ILE A 397 1 10 HELIX 22 22 ASN A 410 GLY A 426 1 17 HELIX 23 23 THR A 429 ASN A 439 1 11 HELIX 24 24 THR A 440 GLN A 445 1 6 HELIX 25 25 ASP A 448 ASN A 466 1 19 HELIX 26 26 LEU A 480 TYR A 490 1 11 HELIX 27 27 ASP A 492 ASP A 509 1 18 HELIX 28 28 ASN A 511 SER A 520 1 10 HELIX 29 29 GLU A 534 LYS A 546 1 13 HELIX 30 30 GLU A 564 ASN A 582 1 19 HELIX 31 31 PRO A 585 SER A 594 1 10 HELIX 32 32 GLU A 596 LEU A 621 1 26 HELIX 33 33 ILE A 626 GLY A 640 1 15 HELIX 34 34 ARG A 642 LEU A 651 5 10 HELIX 35 35 VAL A 654 SER A 665 1 12 HELIX 36 36 SER A 669 SER A 674 1 6 HELIX 37 37 ARG A 677 LEU A 681 5 5 HELIX 38 38 VAL A 692 LEU A 699 1 8 SHEET 1 A 7 VAL A 98 ALA A 101 0 SHEET 2 A 7 ILE A 117 THR A 121 1 O ILE A 119 N ALA A 101 SHEET 3 A 7 LYS A 70 VAL A 75 1 N VAL A 75 O ALA A 120 SHEET 4 A 7 VAL A 139 ASP A 145 1 O VAL A 143 N VAL A 72 SHEET 5 A 7 GLN A 171 SER A 176 1 O LEU A 175 N ALA A 144 SHEET 6 A 7 ALA A 42 SER A 45 1 N ILE A 44 O GLY A 174 SHEET 7 A 7 GLU A 192 VAL A 195 1 O GLU A 192 N LEU A 43 SHEET 1 B 8 ILE A 220 ARG A 222 0 SHEET 2 B 8 PHE A 212 TRP A 215 -1 N VAL A 213 O ASP A 221 SHEET 3 B 8 LEU A 203 PHE A 208 -1 N VAL A 207 O THR A 214 SHEET 4 B 8 GLY A 378 VAL A 383 1 O GLY A 380 N GLY A 206 SHEET 5 B 8 ARG A 340 ILE A 343 1 N VAL A 341 O ILE A 381 SHEET 6 B 8 ALA A 240 PHE A 243 1 N LEU A 241 O ILE A 342 SHEET 7 B 8 ALA A 323 ALA A 326 1 O ALA A 326 N ILE A 242 SHEET 8 B 8 VAL A 297 HIS A 300 1 N ALA A 298 O VAL A 325 SHEET 1 C 2 TRP A 347 ARG A 348 0 SHEET 2 C 2 GLU A 355 ARG A 356 -1 O GLU A 355 N ARG A 348 SHEET 1 D 2 ILE A 469 ILE A 471 0 SHEET 2 D 2 ILE A 477 PRO A 479 -1 O ARG A 478 N GLU A 470 SITE 1 AC1 3 LYS A 249 ARG A 344 THR A 385 SITE 1 AC2 4 MET A 246 ARG A 247 ARG A 248 HOH A1077 SITE 1 AC3 3 ARG A 634 LYS A 638 TYR A 639 SITE 1 AC4 4 LYS A 108 HIS A 131 LYS A 488 HOH A1096 SITE 1 AC5 5 ARG A 247 HIS A 301 ALA A 302 THR A 327 SITE 2 AC5 5 THR A 329 SITE 1 AC6 11 SER A 23 PHE A 24 TYR A 25 GLN A 28 SITE 2 AC6 11 THR A 48 GLY A 51 LYS A 52 THR A 53 SITE 3 AC6 11 LEU A 54 HOH A1072 HOH A1104 CRYST1 117.205 83.535 96.038 90.00 121.22 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008532 0.000000 0.005171 0.00000 SCALE2 0.000000 0.011971 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012176 0.00000