HEADER VIRAL PROTEIN 02-APR-08 2ZL6 TITLE ATOMIC RESOLUTION STRUCTURAL CHARACTERIZATION OF RECOGNITION OF HISTO- TITLE 2 BLOOD GROUP ANTIGENS BY NORWALK VIRUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 58 KD CAPSID PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: P-DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NORWALK VIRUS; SOURCE 3 STRAIN: G.I; SOURCE 4 GENE: ORF2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PHISMAL-C2ET KEYWDS NOROVIRUS, NORWALK VIRUS, HBGA, HISTO-BLOOD GROUP ANTIGEN, KEYWDS 2 CARBOHYDRATE, VP1, P-DOMAIN, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.M.CHOI,A.M.HUSTON,M.K.ESTES,B.V.V.PRASAD REVDAT 5 01-NOV-23 2ZL6 1 HETSYN REVDAT 4 29-JUL-20 2ZL6 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 13-JUL-11 2ZL6 1 VERSN REVDAT 2 24-FEB-09 2ZL6 1 VERSN REVDAT 1 22-JUL-08 2ZL6 0 JRNL AUTH J.M.CHOI,A.M.HUTSON,M.K.ESTES,B.V.V.PRASAD JRNL TITL ATOMIC RESOLUTION STRUCTURAL CHARACTERIZATION OF RECOGNITION JRNL TITL 2 OF HISTO-BLOOD GROUP ANTIGENS BY NORWALK VIRUS JRNL REF PROC.NATL.ACAD.SCI.USA V. 105 9175 2008 JRNL REFN ISSN 0027-8424 JRNL PMID 18599458 JRNL DOI 10.1073/PNAS.0803275105 REMARK 2 REMARK 2 RESOLUTION. 1.43 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.43 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 110616 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5880 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.43 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.47 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5310 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 62.74 REMARK 3 BIN R VALUE (WORKING SET) : 0.2610 REMARK 3 BIN FREE R VALUE SET COUNT : 298 REMARK 3 BIN FREE R VALUE : 0.3100 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4321 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 823 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.44000 REMARK 3 B22 (A**2) : 0.44000 REMARK 3 B33 (A**2) : -0.66000 REMARK 3 B12 (A**2) : 0.22000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.064 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.064 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.042 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.075 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4561 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6275 ; 1.391 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 584 ; 6.485 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 180 ;34.146 ;24.556 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 623 ;10.891 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;11.423 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 705 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3547 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2225 ; 0.205 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3194 ; 0.312 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 632 ; 0.146 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 53 ; 0.164 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 55 ; 0.172 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2932 ; 0.813 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4711 ; 1.385 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1813 ; 1.831 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1557 ; 2.560 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2ZL6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-APR-08. REMARK 100 THE DEPOSITION ID IS D_1000028110. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-AUG-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97942 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK HIGH-RESOLUTION REMARK 200 DOUBLE-CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 121303 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.430 REMARK 200 RESOLUTION RANGE LOW (A) : 41.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.380 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.43 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 0.53200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1IHM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CITRIC ACID(PH 3.8), 0.2M REMARK 280 AMMONIUM NITRATE, 20% PEG 3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.30967 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 108.61933 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 108.61933 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 54.30967 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -0.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 835 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 888 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 225 REMARK 465 GLN A 226 REMARK 465 LYS A 227 REMARK 465 THR A 228 REMARK 465 ARG A 229 REMARK 465 PRO A 230 REMARK 465 GLY A 517 REMARK 465 THR A 518 REMARK 465 ALA A 519 REMARK 465 GLU B 225 REMARK 465 GLN B 226 REMARK 465 LYS B 227 REMARK 465 THR B 228 REMARK 465 ARG B 229 REMARK 465 GLY B 517 REMARK 465 THR B 518 REMARK 465 ALA B 519 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 797 O HOH B 956 1.83 REMARK 500 O HOH A 736 O HOH A 914 2.02 REMARK 500 O HOH A 572 O HOH A 927 2.17 REMARK 500 O HOH B 690 O HOH B 956 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 586 O HOH B 1083 2655 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 339 160.12 88.06 REMARK 500 PRO A 428 48.39 -77.41 REMARK 500 GLN B 261 -78.08 -107.07 REMARK 500 SER B 339 158.82 84.92 REMARK 500 PRO B 428 47.74 -75.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ZL5 RELATED DB: PDB REMARK 900 SAME P-DOMAIN REMARK 900 RELATED ID: 2ZL7 RELATED DB: PDB REMARK 900 SAME P-DOMAIN WITH A-TYPE HBGA DBREF 2ZL6 A 225 519 UNP Q83884 Q83884_9CALI 225 519 DBREF 2ZL6 B 225 519 UNP Q83884 Q83884_9CALI 225 519 SEQRES 1 A 295 GLU GLN LYS THR ARG PRO PHE THR LEU PRO ASN LEU PRO SEQRES 2 A 295 LEU SER SER LEU SER ASN SER ARG ALA PRO LEU PRO ILE SEQRES 3 A 295 SER SER MET GLY ILE SER PRO ASP ASN VAL GLN SER VAL SEQRES 4 A 295 GLN PHE GLN ASN GLY ARG CYS THR LEU ASP GLY ARG LEU SEQRES 5 A 295 VAL GLY THR THR PRO VAL SER LEU SER HIS VAL ALA LYS SEQRES 6 A 295 ILE ARG GLY THR SER ASN GLY THR VAL ILE ASN LEU THR SEQRES 7 A 295 GLU LEU ASP GLY THR PRO PHE HIS PRO PHE GLU GLY PRO SEQRES 8 A 295 ALA PRO ILE GLY PHE PRO ASP LEU GLY GLY CYS ASP TRP SEQRES 9 A 295 HIS ILE ASN MET THR GLN PHE GLY HIS SER SER GLN THR SEQRES 10 A 295 GLN TYR ASP VAL ASP THR THR PRO ASP THR PHE VAL PRO SEQRES 11 A 295 HIS LEU GLY SER ILE GLN ALA ASN GLY ILE GLY SER GLY SEQRES 12 A 295 ASN TYR VAL GLY VAL LEU SER TRP ILE SER PRO PRO SER SEQRES 13 A 295 HIS PRO SER GLY SER GLN VAL ASP LEU TRP LYS ILE PRO SEQRES 14 A 295 ASN TYR GLY SER SER ILE THR GLU ALA THR HIS LEU ALA SEQRES 15 A 295 PRO SER VAL TYR PRO PRO GLY PHE GLY GLU VAL LEU VAL SEQRES 16 A 295 PHE PHE MET SER LYS MET PRO GLY PRO GLY ALA TYR ASN SEQRES 17 A 295 LEU PRO CYS LEU LEU PRO GLN GLU TYR ILE SER HIS LEU SEQRES 18 A 295 ALA SER GLU GLN ALA PRO THR VAL GLY GLU ALA ALA LEU SEQRES 19 A 295 LEU HIS TYR VAL ASP PRO ASP THR GLY ARG ASN LEU GLY SEQRES 20 A 295 GLU PHE LYS ALA TYR PRO ASP GLY PHE LEU THR CYS VAL SEQRES 21 A 295 PRO ASN GLY ALA SER SER GLY PRO GLN GLN LEU PRO ILE SEQRES 22 A 295 ASN GLY VAL PHE VAL PHE VAL SER TRP VAL SER ARG PHE SEQRES 23 A 295 TYR GLN LEU LYS PRO VAL GLY THR ALA SEQRES 1 B 295 GLU GLN LYS THR ARG PRO PHE THR LEU PRO ASN LEU PRO SEQRES 2 B 295 LEU SER SER LEU SER ASN SER ARG ALA PRO LEU PRO ILE SEQRES 3 B 295 SER SER MET GLY ILE SER PRO ASP ASN VAL GLN SER VAL SEQRES 4 B 295 GLN PHE GLN ASN GLY ARG CYS THR LEU ASP GLY ARG LEU SEQRES 5 B 295 VAL GLY THR THR PRO VAL SER LEU SER HIS VAL ALA LYS SEQRES 6 B 295 ILE ARG GLY THR SER ASN GLY THR VAL ILE ASN LEU THR SEQRES 7 B 295 GLU LEU ASP GLY THR PRO PHE HIS PRO PHE GLU GLY PRO SEQRES 8 B 295 ALA PRO ILE GLY PHE PRO ASP LEU GLY GLY CYS ASP TRP SEQRES 9 B 295 HIS ILE ASN MET THR GLN PHE GLY HIS SER SER GLN THR SEQRES 10 B 295 GLN TYR ASP VAL ASP THR THR PRO ASP THR PHE VAL PRO SEQRES 11 B 295 HIS LEU GLY SER ILE GLN ALA ASN GLY ILE GLY SER GLY SEQRES 12 B 295 ASN TYR VAL GLY VAL LEU SER TRP ILE SER PRO PRO SER SEQRES 13 B 295 HIS PRO SER GLY SER GLN VAL ASP LEU TRP LYS ILE PRO SEQRES 14 B 295 ASN TYR GLY SER SER ILE THR GLU ALA THR HIS LEU ALA SEQRES 15 B 295 PRO SER VAL TYR PRO PRO GLY PHE GLY GLU VAL LEU VAL SEQRES 16 B 295 PHE PHE MET SER LYS MET PRO GLY PRO GLY ALA TYR ASN SEQRES 17 B 295 LEU PRO CYS LEU LEU PRO GLN GLU TYR ILE SER HIS LEU SEQRES 18 B 295 ALA SER GLU GLN ALA PRO THR VAL GLY GLU ALA ALA LEU SEQRES 19 B 295 LEU HIS TYR VAL ASP PRO ASP THR GLY ARG ASN LEU GLY SEQRES 20 B 295 GLU PHE LYS ALA TYR PRO ASP GLY PHE LEU THR CYS VAL SEQRES 21 B 295 PRO ASN GLY ALA SER SER GLY PRO GLN GLN LEU PRO ILE SEQRES 22 B 295 ASN GLY VAL PHE VAL PHE VAL SER TRP VAL SER ARG PHE SEQRES 23 B 295 TYR GLN LEU LYS PRO VAL GLY THR ALA HET BGC C 1 12 HET GAL C 2 11 HET NAG C 3 14 HET GAL C 4 11 HET FUC C 5 10 HET MG A 1 1 HET ACT A 520 4 HET MG B 520 1 HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM MG MAGNESIUM ION HETNAM ACT ACETATE ION HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 3 BGC C6 H12 O6 FORMUL 3 GAL 2(C6 H12 O6) FORMUL 3 NAG C8 H15 N O6 FORMUL 3 FUC C6 H12 O5 FORMUL 4 MG 2(MG 2+) FORMUL 5 ACT C2 H3 O2 1- FORMUL 7 HOH *823(H2 O) HELIX 1 1 PRO A 237 LEU A 241 5 5 HELIX 2 2 SER A 283 VAL A 287 5 5 HELIX 3 3 HIS A 310 GLY A 314 5 5 HELIX 4 4 VAL A 353 LEU A 356 5 4 HELIX 5 5 PRO A 438 GLN A 449 1 12 HELIX 6 6 GLY A 491 LEU A 495 5 5 HELIX 7 7 PRO B 237 LEU B 241 5 5 HELIX 8 8 SER B 283 VAL B 287 5 5 HELIX 9 9 HIS B 310 GLY B 314 5 5 HELIX 10 10 VAL B 353 LEU B 356 5 4 HELIX 11 11 PRO B 438 GLN B 449 1 12 HELIX 12 12 GLY B 491 LEU B 495 5 5 SHEET 1 A 3 SER A 252 GLY A 254 0 SHEET 2 A 3 PHE A 420 MET A 425 -1 O MET A 422 N SER A 252 SHEET 3 A 3 TYR A 431 CYS A 435 -1 O LEU A 433 N SER A 423 SHEET 1 B 6 THR A 341 VAL A 345 0 SHEET 2 B 6 ASP A 327 THR A 333 -1 N ILE A 330 O TYR A 343 SHEET 3 B 6 GLY A 367 SER A 377 -1 O VAL A 370 N THR A 333 SHEET 4 B 6 LYS A 289 SER A 294 -1 N ILE A 290 O GLY A 371 SHEET 5 B 6 VAL A 298 THR A 302 -1 O ASN A 300 N THR A 293 SHEET 6 B 6 SER A 358 GLN A 360 -1 O ILE A 359 N ILE A 299 SHEET 1 C 5 VAL A 417 LEU A 418 0 SHEET 2 C 5 PHE A 480 CYS A 483 -1 O CYS A 483 N VAL A 417 SHEET 3 C 5 ASN A 469 TYR A 476 -1 N TYR A 476 O PHE A 480 SHEET 4 C 5 ALA A 456 VAL A 462 -1 N TYR A 461 O LEU A 470 SHEET 5 C 5 VAL A 500 VAL A 507 -1 O SER A 505 N LEU A 458 SHEET 1 D 3 SER B 252 GLY B 254 0 SHEET 2 D 3 VAL B 417 MET B 425 -1 O MET B 422 N SER B 252 SHEET 3 D 3 TYR B 431 CYS B 435 -1 O LEU B 433 N SER B 423 SHEET 1 E 6 SER B 252 GLY B 254 0 SHEET 2 E 6 VAL B 417 MET B 425 -1 O MET B 422 N SER B 252 SHEET 3 E 6 PHE B 480 CYS B 483 -1 O CYS B 483 N VAL B 417 SHEET 4 E 6 ASN B 469 TYR B 476 -1 N TYR B 476 O PHE B 480 SHEET 5 E 6 ALA B 456 VAL B 462 -1 N TYR B 461 O LEU B 470 SHEET 6 E 6 VAL B 500 VAL B 507 -1 O VAL B 500 N VAL B 462 SHEET 1 F 6 THR B 341 VAL B 345 0 SHEET 2 F 6 ASP B 327 THR B 333 -1 N ILE B 330 O TYR B 343 SHEET 3 F 6 GLY B 367 SER B 377 -1 O VAL B 372 N ASN B 331 SHEET 4 F 6 LYS B 289 SER B 294 -1 N ILE B 290 O GLY B 371 SHEET 5 F 6 VAL B 298 THR B 302 -1 O ASN B 300 N THR B 293 SHEET 6 F 6 SER B 358 GLN B 360 -1 O ILE B 359 N ILE B 299 LINK O4 BGC C 1 C1 GAL C 2 1555 1555 1.39 LINK O3 GAL C 2 C1 NAG C 3 1555 1555 1.42 LINK O3 NAG C 3 C1 GAL C 4 1555 1555 1.43 LINK O2 GAL C 4 C1 FUC C 5 1555 1555 1.42 CISPEP 1 HIS A 381 PRO A 382 0 -7.59 CISPEP 2 HIS B 381 PRO B 382 0 -9.80 CRYST1 83.512 83.512 162.929 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011974 0.006913 0.000000 0.00000 SCALE2 0.000000 0.013827 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006138 0.00000