data_2ZO1 # _entry.id 2ZO1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2ZO1 pdb_00002zo1 10.2210/pdb2zo1/pdb NDB PD1134 ? ? RCSB RCSB028209 ? ? WWPDB D_1000028209 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2ZO0 'NP95 SRA domain DNA specific complex 1' unspecified PDB 2ZO2 'NP95 SRA domain non-specific DNA complex' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2ZO1 _pdbx_database_status.recvd_initial_deposition_date 2008-05-05 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hashimoto, H.' 1 'Horton, J.R.' 2 'Cheng, X.' 3 # _citation.id primary _citation.title 'The SRA domain of UHRF1 flips 5-methylcytosine out of the DNA helix' _citation.journal_abbrev Nature _citation.journal_volume 455 _citation.page_first 826 _citation.page_last 829 _citation.year 2008 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18772888 _citation.pdbx_database_id_DOI 10.1038/nature07280 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hashimoto, H.' 1 ? primary 'Horton, J.R.' 2 ? primary 'Zhang, X.' 3 ? primary 'Bostick, M.' 4 ? primary 'Jacobsen, S.E.' 5 ? primary 'Cheng, X.' 6 ? # _cell.entry_id 2ZO1 _cell.length_a 62.026 _cell.length_b 62.026 _cell.length_c 164.200 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2ZO1 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 92 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*DTP*DCP*DCP*DAP*DTP*DGP*DCP*DGP*DCP*DTP*DGP*DAP*DC)-3') ; 3927.561 1 ? ? ? '12 base pair DNA duplex' 2 polymer syn ;DNA (5'-D(*DGP*DTP*DCP*DAP*DGP*(5CM)P*DGP*DCP*DAP*DAP*DTP*DGP*DG)-3') ; 4030.650 1 ? ? ? '12 base pair DNA duplex' 3 polymer man 'E3 ubiquitin-protein ligase UHRF1' 23915.711 1 6.3.2.- ? 'SRA domain, residues 419-628' ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 5 water nat water 18.015 97 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name ;Ubiquitin-like PHD and RING finger domain-containing protein 1, Ubiquitin-like-containing PHD and RING finger domains protein 1, Nuclear zinc finger protein Np95, Nuclear protein 95 ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DC)(DC)(DA)(DT)(DG)(DC)(DG)(DC)(DT)(DG)(DA)(DC)' TCCATGCGCTGAC D ? 2 polydeoxyribonucleotide no yes '(DG)(DT)(DC)(DA)(DG)(5CM)(DG)(DC)(DA)(DA)(DT)(DG)(DG)' GTCAGCGCAATGG E ? 3 'polypeptide(L)' no no ;HMPANHFGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDNGNYFTYTGSGGRDLSGNKR TAGQSSDQKLTNNNRALALNCHSPINEKGAEAEDWRQGKPVRVVRNMKGGKHSKYAPAEGNRYDGIYKVVKYWPERGKSG FLVWRYLLRRDDTEPEPWTREGKDRTRQLGLTMQYPEGYLEALANKEKSRKR ; ;HMPANHFGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDNGNYFTYTGSGGRDLSGNKR TAGQSSDQKLTNNNRALALNCHSPINEKGAEAEDWRQGKPVRVVRNMKGGKHSKYAPAEGNRYDGIYKVVKYWPERGKSG FLVWRYLLRRDDTEPEPWTREGKDRTRQLGLTMQYPEGYLEALANKEKSRKR ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DC n 1 3 DC n 1 4 DA n 1 5 DT n 1 6 DG n 1 7 DC n 1 8 DG n 1 9 DC n 1 10 DT n 1 11 DG n 1 12 DA n 1 13 DC n 2 1 DG n 2 2 DT n 2 3 DC n 2 4 DA n 2 5 DG n 2 6 5CM n 2 7 DG n 2 8 DC n 2 9 DA n 2 10 DA n 2 11 DT n 2 12 DG n 2 13 DG n 3 1 HIS n 3 2 MET n 3 3 PRO n 3 4 ALA n 3 5 ASN n 3 6 HIS n 3 7 PHE n 3 8 GLY n 3 9 PRO n 3 10 ILE n 3 11 PRO n 3 12 GLY n 3 13 VAL n 3 14 PRO n 3 15 VAL n 3 16 GLY n 3 17 THR n 3 18 MET n 3 19 TRP n 3 20 ARG n 3 21 PHE n 3 22 ARG n 3 23 VAL n 3 24 GLN n 3 25 VAL n 3 26 SER n 3 27 GLU n 3 28 SER n 3 29 GLY n 3 30 VAL n 3 31 HIS n 3 32 ARG n 3 33 PRO n 3 34 HIS n 3 35 VAL n 3 36 ALA n 3 37 GLY n 3 38 ILE n 3 39 HIS n 3 40 GLY n 3 41 ARG n 3 42 SER n 3 43 ASN n 3 44 ASP n 3 45 GLY n 3 46 ALA n 3 47 TYR n 3 48 SER n 3 49 LEU n 3 50 VAL n 3 51 LEU n 3 52 ALA n 3 53 GLY n 3 54 GLY n 3 55 TYR n 3 56 GLU n 3 57 ASP n 3 58 ASP n 3 59 VAL n 3 60 ASP n 3 61 ASN n 3 62 GLY n 3 63 ASN n 3 64 TYR n 3 65 PHE n 3 66 THR n 3 67 TYR n 3 68 THR n 3 69 GLY n 3 70 SER n 3 71 GLY n 3 72 GLY n 3 73 ARG n 3 74 ASP n 3 75 LEU n 3 76 SER n 3 77 GLY n 3 78 ASN n 3 79 LYS n 3 80 ARG n 3 81 THR n 3 82 ALA n 3 83 GLY n 3 84 GLN n 3 85 SER n 3 86 SER n 3 87 ASP n 3 88 GLN n 3 89 LYS n 3 90 LEU n 3 91 THR n 3 92 ASN n 3 93 ASN n 3 94 ASN n 3 95 ARG n 3 96 ALA n 3 97 LEU n 3 98 ALA n 3 99 LEU n 3 100 ASN n 3 101 CYS n 3 102 HIS n 3 103 SER n 3 104 PRO n 3 105 ILE n 3 106 ASN n 3 107 GLU n 3 108 LYS n 3 109 GLY n 3 110 ALA n 3 111 GLU n 3 112 ALA n 3 113 GLU n 3 114 ASP n 3 115 TRP n 3 116 ARG n 3 117 GLN n 3 118 GLY n 3 119 LYS n 3 120 PRO n 3 121 VAL n 3 122 ARG n 3 123 VAL n 3 124 VAL n 3 125 ARG n 3 126 ASN n 3 127 MET n 3 128 LYS n 3 129 GLY n 3 130 GLY n 3 131 LYS n 3 132 HIS n 3 133 SER n 3 134 LYS n 3 135 TYR n 3 136 ALA n 3 137 PRO n 3 138 ALA n 3 139 GLU n 3 140 GLY n 3 141 ASN n 3 142 ARG n 3 143 TYR n 3 144 ASP n 3 145 GLY n 3 146 ILE n 3 147 TYR n 3 148 LYS n 3 149 VAL n 3 150 VAL n 3 151 LYS n 3 152 TYR n 3 153 TRP n 3 154 PRO n 3 155 GLU n 3 156 ARG n 3 157 GLY n 3 158 LYS n 3 159 SER n 3 160 GLY n 3 161 PHE n 3 162 LEU n 3 163 VAL n 3 164 TRP n 3 165 ARG n 3 166 TYR n 3 167 LEU n 3 168 LEU n 3 169 ARG n 3 170 ARG n 3 171 ASP n 3 172 ASP n 3 173 THR n 3 174 GLU n 3 175 PRO n 3 176 GLU n 3 177 PRO n 3 178 TRP n 3 179 THR n 3 180 ARG n 3 181 GLU n 3 182 GLY n 3 183 LYS n 3 184 ASP n 3 185 ARG n 3 186 THR n 3 187 ARG n 3 188 GLN n 3 189 LEU n 3 190 GLY n 3 191 LEU n 3 192 THR n 3 193 MET n 3 194 GLN n 3 195 TYR n 3 196 PRO n 3 197 GLU n 3 198 GLY n 3 199 TYR n 3 200 LEU n 3 201 GLU n 3 202 ALA n 3 203 LEU n 3 204 ALA n 3 205 ASN n 3 206 LYS n 3 207 GLU n 3 208 LYS n 3 209 SER n 3 210 ARG n 3 211 LYS n 3 212 ARG n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Np95 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-Gold cells' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pXC666 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP UHRF1_MOUSE Q8VDF2 3 ;PANHFGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVDNGNYFTYTGSGGRDLSGNKRTA GQSSDQKLTNNNRALALNCHSPINEKGAEAEDWRQGKPVRVVRNMKGGKHSKYAPAEGNRYDGIYKVVKYWPERGKSGFL VWRYLLRRDDTEPEPWTREGKDRTRQLGLTMQYPEGYLEALANKEKSRKR ; 419 ? 2 PDB 2ZO1 2ZO1 1 TCCATGCGCTGAC 1 ? 3 PDB 2ZO1 2ZO1 2 GTCAGCGCAATGG 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2ZO1 B 3 ? 212 ? Q8VDF2 419 ? 628 ? 419 628 2 2 2ZO1 D 1 ? 13 ? 2ZO1 401 ? 413 ? 401 413 3 3 2ZO1 E 1 ? 13 ? 2ZO1 421 ? 433 ? 421 433 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 3 2ZO1 HIS B 1 ? UNP Q8VDF2 ? ? 'expression tag' 417 1 3 2ZO1 MET B 2 ? UNP Q8VDF2 ? ? 'expression tag' 418 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2ZO1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.48 _exptl_crystal.density_percent_sol 50.35 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '20% (v/v) polyethylene glycol 3350, 0.4M NaCl, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 3350' ? ? ? 1 2 1 NaCL ? ? ? 1 3 1 H2O ? ? ? 1 4 2 'PEG 3350' ? ? ? 1 5 2 NaCL ? ? ? 1 6 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2008-02-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 2ZO1 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.0 _reflns.d_resolution_high 1.96 _reflns.d_resolution_low 34.23 _reflns.number_all ? _reflns.number_obs 23766 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.076 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.4 _reflns.B_iso_Wilson_estimate 27.1 _reflns.pdbx_redundancy 14.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.96 _reflns_shell.d_res_low 2.03 _reflns_shell.percent_possible_all 98.1 _reflns_shell.Rmerge_I_obs 0.465 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2276 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2ZO1 _refine.ls_number_reflns_obs 22899 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF 898993.84 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 34.23 _refine.ls_d_res_high 1.96 _refine.ls_percent_reflns_obs 96.1 _refine.ls_R_factor_obs 0.221 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.221 _refine.ls_R_factor_R_free 0.246 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 1069 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 44.80 _refine.aniso_B[1][1] -6.18000 _refine.aniso_B[2][2] -6.18000 _refine.aniso_B[3][3] 12.36000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.4 _refine.solvent_model_param_bsol 52.1026 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;The density for the nucleotide at position 9 in chain E indicated an extrahelical conformation (E429) as well as an intrahelical conformation (E430). The depositors made a model as if an additional nucleotide A10 was inserted. ; _refine.pdbx_starting_model 'PDB ENTRY 2ZO0' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2ZO1 _refine_analyze.Luzzati_coordinate_error_obs 0.26 _refine_analyze.Luzzati_sigma_a_obs 0.18 _refine_analyze.Luzzati_d_res_low_obs 35.00 _refine_analyze.Luzzati_coordinate_error_free 0.29 _refine_analyze.Luzzati_sigma_a_free 0.19 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1608 _refine_hist.pdbx_number_atoms_nucleic_acid 430 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 97 _refine_hist.number_atoms_total 2143 _refine_hist.d_res_high 1.96 _refine_hist.d_res_low 34.23 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.10 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.40 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.94 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.40 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.13 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 3.44 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 5.50 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 1.96 _refine_ls_shell.d_res_low 2.03 _refine_ls_shell.number_reflns_R_work 1901 _refine_ls_shell.R_factor_R_work 0.282 _refine_ls_shell.percent_reflns_obs 84.3 _refine_ls_shell.R_factor_R_free 0.299 _refine_ls_shell.R_factor_R_free_error 0.040 _refine_ls_shell.percent_reflns_R_free 2.9 _refine_ls_shell.number_reflns_R_free 57 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1901 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2ZO1 _struct.title 'Mouse NP95 SRA domain DNA specific complex 2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2ZO1 _struct_keywords.pdbx_keywords LIGASE/DNA _struct_keywords.text ;Base flipping, Cell cycle, Developmental protein, DNA damage, DNA repair, DNA-binding, Ligase, Metal-binding, Nucleus, Phosphoprotein, Transcription, Transcription regulation, Ubl conjugation, Ubl conjugation pathway, Zinc, Zinc-finger, Oxidoreductase, Pyruvate, LIGASE-DNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE C 21 ? SER C 28 ? PHE B 437 SER B 444 1 ? 8 HELX_P HELX_P2 2 THR C 91 ? CYS C 101 ? THR B 507 CYS B 517 1 ? 11 HELX_P HELX_P3 3 ASP C 114 ? GLY C 118 ? ASP B 530 GLY B 534 5 ? 5 HELX_P HELX_P4 4 LYS C 128 ? HIS C 132 ? LYS B 544 HIS B 548 5 ? 5 HELX_P HELX_P5 5 THR C 179 ? GLY C 190 ? THR B 595 GLY B 606 1 ? 12 HELX_P HELX_P6 6 GLY C 198 ? ASN C 205 ? GLY B 614 ASN B 621 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DG 5 "O3'" ? ? ? 1_555 B 5CM 6 P ? ? E DG 425 E 5CM 426 1_555 ? ? ? ? ? ? ? 1.608 ? ? covale2 covale both ? B 5CM 6 "O3'" ? ? ? 1_555 B DG 7 P ? ? E 5CM 426 E DG 427 1_555 ? ? ? ? ? ? ? 1.613 ? ? hydrog1 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 10 N1 ? ? D DT 405 E DA 430 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 10 N6 ? ? D DT 405 E DA 430 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 8 N3 ? ? D DG 406 E DC 428 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog4 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 7 N1 ? ? D DC 407 E DG 427 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 7 O6 ? ? D DC 407 E DG 427 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 7 N2 ? ? D DC 407 E DG 427 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 5 N1 ? ? D DC 409 E DG 425 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 5 O6 ? ? D DC 409 E DG 425 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 5 N2 ? ? D DC 409 E DG 425 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 4 N1 ? ? D DT 410 E DA 424 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 4 N6 ? ? D DT 410 E DA 424 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DC 3 N3 ? ? D DG 411 E DC 423 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DC 3 O2 ? ? D DG 411 E DC 423 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DC 3 N4 ? ? D DG 411 E DC 423 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 12 N1 ? ? ? 1_555 B DT 2 N3 ? ? D DA 412 E DT 422 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 12 N6 ? ? ? 1_555 B DT 2 O4 ? ? D DA 412 E DT 422 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 1 N1 ? ? D DC 413 E DG 421 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 1 O6 ? ? D DC 413 E DG 421 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 1 N2 ? ? D DC 413 E DG 421 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET C 18 ? TRP C 19 ? MET B 434 TRP B 435 A 2 ASN C 141 ? ARG C 156 ? ASN B 557 ARG B 572 A 3 LEU C 162 ? ARG C 170 ? LEU B 578 ARG B 586 A 4 TYR C 64 ? THR C 68 ? TYR B 480 THR B 484 A 5 VAL C 59 ? ASN C 61 ? VAL B 475 ASN B 477 B 1 ILE C 38 ? ARG C 41 ? ILE B 454 ARG B 457 B 2 GLY C 45 ? LEU C 51 ? GLY B 461 LEU B 467 B 3 VAL C 121 ? ASN C 126 ? VAL B 537 ASN B 542 B 4 ASN C 141 ? ARG C 156 ? ASN B 557 ARG B 572 B 5 ALA C 110 ? GLU C 111 ? ALA B 526 GLU B 527 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP C 19 ? N TRP B 435 O ASN C 141 ? O ASN B 557 A 2 3 N LYS C 151 ? N LYS B 567 O LEU C 167 ? O LEU B 583 A 3 4 O TYR C 166 ? O TYR B 582 N TYR C 67 ? N TYR B 483 A 4 5 O THR C 66 ? O THR B 482 N VAL C 59 ? N VAL B 475 B 1 2 N HIS C 39 ? N HIS B 455 O SER C 48 ? O SER B 464 B 2 3 N LEU C 51 ? N LEU B 467 O ASN C 126 ? O ASN B 542 B 3 4 N ARG C 125 ? N ARG B 541 O ARG C 142 ? O ARG B 558 B 4 5 O TYR C 152 ? O TYR B 568 N ALA C 110 ? N ALA B 526 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B EDO 122 ? 9 'BINDING SITE FOR RESIDUE EDO B 122' AC2 Software B EDO 123 ? 4 'BINDING SITE FOR RESIDUE EDO B 123' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 ARG C 41 ? ARG B 457 . ? 1_555 ? 2 AC1 9 ASN C 43 ? ASN B 459 . ? 1_555 ? 3 AC1 9 GLU C 56 ? GLU B 472 . ? 6_456 ? 4 AC1 9 ASP C 57 ? ASP B 473 . ? 6_456 ? 5 AC1 9 ASP C 58 ? ASP B 474 . ? 6_456 ? 6 AC1 9 VAL C 59 ? VAL B 475 . ? 6_456 ? 7 AC1 9 LYS C 158 ? LYS B 574 . ? 6_456 ? 8 AC1 9 ARG C 165 ? ARG B 581 . ? 6_456 ? 9 AC1 9 DC A 13 ? DC D 413 . ? 1_555 ? 10 AC2 4 HOH H . ? HOH B 49 . ? 1_555 ? 11 AC2 4 PRO C 9 ? PRO B 425 . ? 1_555 ? 12 AC2 4 ASP C 172 ? ASP B 588 . ? 1_555 ? 13 AC2 4 THR C 173 ? THR B 589 . ? 1_555 ? # _database_PDB_matrix.entry_id 2ZO1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2ZO1 _atom_sites.fract_transf_matrix[1][1] 0.016122 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016122 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006090 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 401 ? ? ? D . n A 1 2 DC 2 402 ? ? ? D . n A 1 3 DC 3 403 ? ? ? D . n A 1 4 DA 4 404 ? ? ? D . n A 1 5 DT 5 405 405 DT THY D . n A 1 6 DG 6 406 406 DG GUA D . n A 1 7 DC 7 407 407 DC CYT D . n A 1 8 DG 8 408 408 DG GUA D . n A 1 9 DC 9 409 409 DC CYT D . n A 1 10 DT 10 410 410 DT THY D . n A 1 11 DG 11 411 411 DG GUA D . n A 1 12 DA 12 412 412 DA ADE D . n A 1 13 DC 13 413 413 DC CYT D . n B 2 1 DG 1 421 421 DG GUA E . n B 2 2 DT 2 422 422 DT THY E . n B 2 3 DC 3 423 423 DC CYT E . n B 2 4 DA 4 424 424 DA ADE E . n B 2 5 DG 5 425 425 DG GUA E . n B 2 6 5CM 6 426 426 5CM CYM E . n B 2 7 DG 7 427 427 DG GUA E . n B 2 8 DC 8 428 428 DC CYT E . n B 2 9 DA 9 429 429 DA ADE E . n B 2 10 DA 10 430 430 DA ADE E . n B 2 11 DT 11 431 431 DT THY E . n B 2 12 DG 12 432 432 DG GUA E . n B 2 13 DG 13 433 ? ? ? E . n C 3 1 HIS 1 417 417 HIS HIS B . n C 3 2 MET 2 418 418 MET MET B . n C 3 3 PRO 3 419 419 PRO PRO B . n C 3 4 ALA 4 420 420 ALA ALA B . n C 3 5 ASN 5 421 421 ASN ASN B . n C 3 6 HIS 6 422 422 HIS HIS B . n C 3 7 PHE 7 423 423 PHE PHE B . n C 3 8 GLY 8 424 424 GLY GLY B . n C 3 9 PRO 9 425 425 PRO PRO B . n C 3 10 ILE 10 426 426 ILE ILE B . n C 3 11 PRO 11 427 427 PRO PRO B . n C 3 12 GLY 12 428 428 GLY GLY B . n C 3 13 VAL 13 429 429 VAL VAL B . n C 3 14 PRO 14 430 430 PRO PRO B . n C 3 15 VAL 15 431 431 VAL VAL B . n C 3 16 GLY 16 432 432 GLY GLY B . n C 3 17 THR 17 433 433 THR THR B . n C 3 18 MET 18 434 434 MET MET B . n C 3 19 TRP 19 435 435 TRP TRP B . n C 3 20 ARG 20 436 436 ARG ARG B . n C 3 21 PHE 21 437 437 PHE PHE B . n C 3 22 ARG 22 438 438 ARG ARG B . n C 3 23 VAL 23 439 439 VAL VAL B . n C 3 24 GLN 24 440 440 GLN GLN B . n C 3 25 VAL 25 441 441 VAL VAL B . n C 3 26 SER 26 442 442 SER SER B . n C 3 27 GLU 27 443 443 GLU GLU B . n C 3 28 SER 28 444 444 SER SER B . n C 3 29 GLY 29 445 445 GLY GLY B . n C 3 30 VAL 30 446 446 VAL VAL B . n C 3 31 HIS 31 447 447 HIS HIS B . n C 3 32 ARG 32 448 448 ARG ARG B . n C 3 33 PRO 33 449 449 PRO PRO B . n C 3 34 HIS 34 450 450 HIS HIS B . n C 3 35 VAL 35 451 451 VAL VAL B . n C 3 36 ALA 36 452 452 ALA ALA B . n C 3 37 GLY 37 453 453 GLY GLY B . n C 3 38 ILE 38 454 454 ILE ILE B . n C 3 39 HIS 39 455 455 HIS HIS B . n C 3 40 GLY 40 456 456 GLY GLY B . n C 3 41 ARG 41 457 457 ARG ARG B . n C 3 42 SER 42 458 458 SER SER B . n C 3 43 ASN 43 459 459 ASN ASN B . n C 3 44 ASP 44 460 460 ASP ASP B . n C 3 45 GLY 45 461 461 GLY GLY B . n C 3 46 ALA 46 462 462 ALA ALA B . n C 3 47 TYR 47 463 463 TYR TYR B . n C 3 48 SER 48 464 464 SER SER B . n C 3 49 LEU 49 465 465 LEU LEU B . n C 3 50 VAL 50 466 466 VAL VAL B . n C 3 51 LEU 51 467 467 LEU LEU B . n C 3 52 ALA 52 468 468 ALA ALA B . n C 3 53 GLY 53 469 469 GLY GLY B . n C 3 54 GLY 54 470 470 GLY GLY B . n C 3 55 TYR 55 471 471 TYR TYR B . n C 3 56 GLU 56 472 472 GLU GLU B . n C 3 57 ASP 57 473 473 ASP ASP B . n C 3 58 ASP 58 474 474 ASP ASP B . n C 3 59 VAL 59 475 475 VAL VAL B . n C 3 60 ASP 60 476 476 ASP ASP B . n C 3 61 ASN 61 477 477 ASN ASN B . n C 3 62 GLY 62 478 478 GLY GLY B . n C 3 63 ASN 63 479 479 ASN ASN B . n C 3 64 TYR 64 480 480 TYR TYR B . n C 3 65 PHE 65 481 481 PHE PHE B . n C 3 66 THR 66 482 482 THR THR B . n C 3 67 TYR 67 483 483 TYR TYR B . n C 3 68 THR 68 484 484 THR THR B . n C 3 69 GLY 69 485 485 GLY GLY B . n C 3 70 SER 70 486 486 SER SER B . n C 3 71 GLY 71 487 487 GLY GLY B . n C 3 72 GLY 72 488 488 GLY GLY B . n C 3 73 ARG 73 489 489 ARG ARG B . n C 3 74 ASP 74 490 490 ASP ASP B . n C 3 75 LEU 75 491 491 LEU LEU B . n C 3 76 SER 76 492 492 SER SER B . n C 3 77 GLY 77 493 493 GLY GLY B . n C 3 78 ASN 78 494 494 ASN ASN B . n C 3 79 LYS 79 495 495 LYS LYS B . n C 3 80 ARG 80 496 496 ARG ARG B . n C 3 81 THR 81 497 497 THR THR B . n C 3 82 ALA 82 498 498 ALA ALA B . n C 3 83 GLY 83 499 499 GLY GLY B . n C 3 84 GLN 84 500 500 GLN GLN B . n C 3 85 SER 85 501 501 SER SER B . n C 3 86 SER 86 502 502 SER SER B . n C 3 87 ASP 87 503 503 ASP ASP B . n C 3 88 GLN 88 504 504 GLN GLN B . n C 3 89 LYS 89 505 505 LYS LYS B . n C 3 90 LEU 90 506 506 LEU LEU B . n C 3 91 THR 91 507 507 THR THR B . n C 3 92 ASN 92 508 508 ASN ASN B . n C 3 93 ASN 93 509 509 ASN ASN B . n C 3 94 ASN 94 510 510 ASN ASN B . n C 3 95 ARG 95 511 511 ARG ARG B . n C 3 96 ALA 96 512 512 ALA ALA B . n C 3 97 LEU 97 513 513 LEU LEU B . n C 3 98 ALA 98 514 514 ALA ALA B . n C 3 99 LEU 99 515 515 LEU LEU B . n C 3 100 ASN 100 516 516 ASN ASN B . n C 3 101 CYS 101 517 517 CYS CYS B . n C 3 102 HIS 102 518 518 HIS HIS B . n C 3 103 SER 103 519 519 SER SER B . n C 3 104 PRO 104 520 520 PRO PRO B . n C 3 105 ILE 105 521 521 ILE ILE B . n C 3 106 ASN 106 522 522 ASN ASN B . n C 3 107 GLU 107 523 523 GLU GLU B . n C 3 108 LYS 108 524 524 LYS LYS B . n C 3 109 GLY 109 525 525 GLY GLY B . n C 3 110 ALA 110 526 526 ALA ALA B . n C 3 111 GLU 111 527 527 GLU GLU B . n C 3 112 ALA 112 528 528 ALA ALA B . n C 3 113 GLU 113 529 529 GLU ALA B . n C 3 114 ASP 114 530 530 ASP ASP B . n C 3 115 TRP 115 531 531 TRP TRP B . n C 3 116 ARG 116 532 532 ARG ARG B . n C 3 117 GLN 117 533 533 GLN GLN B . n C 3 118 GLY 118 534 534 GLY GLY B . n C 3 119 LYS 119 535 535 LYS LYS B . n C 3 120 PRO 120 536 536 PRO PRO B . n C 3 121 VAL 121 537 537 VAL VAL B . n C 3 122 ARG 122 538 538 ARG ARG B . n C 3 123 VAL 123 539 539 VAL VAL B . n C 3 124 VAL 124 540 540 VAL VAL B . n C 3 125 ARG 125 541 541 ARG ARG B . n C 3 126 ASN 126 542 542 ASN ASN B . n C 3 127 MET 127 543 543 MET MET B . n C 3 128 LYS 128 544 544 LYS LYS B . n C 3 129 GLY 129 545 545 GLY GLY B . n C 3 130 GLY 130 546 546 GLY GLY B . n C 3 131 LYS 131 547 547 LYS ALA B . n C 3 132 HIS 132 548 548 HIS HIS B . n C 3 133 SER 133 549 549 SER SER B . n C 3 134 LYS 134 550 550 LYS LYS B . n C 3 135 TYR 135 551 551 TYR TYR B . n C 3 136 ALA 136 552 552 ALA ALA B . n C 3 137 PRO 137 553 553 PRO PRO B . n C 3 138 ALA 138 554 554 ALA ALA B . n C 3 139 GLU 139 555 555 GLU GLU B . n C 3 140 GLY 140 556 556 GLY GLY B . n C 3 141 ASN 141 557 557 ASN ASN B . n C 3 142 ARG 142 558 558 ARG ARG B . n C 3 143 TYR 143 559 559 TYR TYR B . n C 3 144 ASP 144 560 560 ASP ASP B . n C 3 145 GLY 145 561 561 GLY GLY B . n C 3 146 ILE 146 562 562 ILE ILE B . n C 3 147 TYR 147 563 563 TYR TYR B . n C 3 148 LYS 148 564 564 LYS LYS B . n C 3 149 VAL 149 565 565 VAL VAL B . n C 3 150 VAL 150 566 566 VAL VAL B . n C 3 151 LYS 151 567 567 LYS LYS B . n C 3 152 TYR 152 568 568 TYR TYR B . n C 3 153 TRP 153 569 569 TRP TRP B . n C 3 154 PRO 154 570 570 PRO PRO B . n C 3 155 GLU 155 571 571 GLU GLU B . n C 3 156 ARG 156 572 572 ARG ARG B . n C 3 157 GLY 157 573 573 GLY GLY B . n C 3 158 LYS 158 574 574 LYS LYS B . n C 3 159 SER 159 575 575 SER SER B . n C 3 160 GLY 160 576 576 GLY GLY B . n C 3 161 PHE 161 577 577 PHE PHE B . n C 3 162 LEU 162 578 578 LEU LEU B . n C 3 163 VAL 163 579 579 VAL VAL B . n C 3 164 TRP 164 580 580 TRP TRP B . n C 3 165 ARG 165 581 581 ARG ARG B . n C 3 166 TYR 166 582 582 TYR TYR B . n C 3 167 LEU 167 583 583 LEU LEU B . n C 3 168 LEU 168 584 584 LEU LEU B . n C 3 169 ARG 169 585 585 ARG ARG B . n C 3 170 ARG 170 586 586 ARG ARG B . n C 3 171 ASP 171 587 587 ASP ASP B . n C 3 172 ASP 172 588 588 ASP ASP B . n C 3 173 THR 173 589 589 THR THR B . n C 3 174 GLU 174 590 590 GLU GLU B . n C 3 175 PRO 175 591 591 PRO PRO B . n C 3 176 GLU 176 592 592 GLU GLU B . n C 3 177 PRO 177 593 593 PRO PRO B . n C 3 178 TRP 178 594 594 TRP TRP B . n C 3 179 THR 179 595 595 THR THR B . n C 3 180 ARG 180 596 596 ARG ALA B . n C 3 181 GLU 181 597 597 GLU ALA B . n C 3 182 GLY 182 598 598 GLY GLY B . n C 3 183 LYS 183 599 599 LYS LYS B . n C 3 184 ASP 184 600 600 ASP ASP B . n C 3 185 ARG 185 601 601 ARG ARG B . n C 3 186 THR 186 602 602 THR THR B . n C 3 187 ARG 187 603 603 ARG ARG B . n C 3 188 GLN 188 604 604 GLN GLN B . n C 3 189 LEU 189 605 605 LEU LEU B . n C 3 190 GLY 190 606 606 GLY GLY B . n C 3 191 LEU 191 607 607 LEU LEU B . n C 3 192 THR 192 608 608 THR THR B . n C 3 193 MET 193 609 609 MET MET B . n C 3 194 GLN 194 610 610 GLN GLN B . n C 3 195 TYR 195 611 611 TYR TYR B . n C 3 196 PRO 196 612 612 PRO PRO B . n C 3 197 GLU 197 613 613 GLU ALA B . n C 3 198 GLY 198 614 614 GLY GLY B . n C 3 199 TYR 199 615 615 TYR TYR B . n C 3 200 LEU 200 616 616 LEU LEU B . n C 3 201 GLU 201 617 617 GLU ALA B . n C 3 202 ALA 202 618 618 ALA ALA B . n C 3 203 LEU 203 619 619 LEU LEU B . n C 3 204 ALA 204 620 620 ALA ALA B . n C 3 205 ASN 205 621 621 ASN ALA B . n C 3 206 LYS 206 622 622 LYS ALA B . n C 3 207 GLU 207 623 ? ? ? B . n C 3 208 LYS 208 624 ? ? ? B . n C 3 209 SER 209 625 ? ? ? B . n C 3 210 ARG 210 626 ? ? ? B . n C 3 211 LYS 211 627 ? ? ? B . n C 3 212 ARG 212 628 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 EDO 1 122 122 EDO EDO B . E 4 EDO 1 123 123 EDO EDO B . F 5 HOH 1 63 63 HOH TIP D . F 5 HOH 2 70 70 HOH TIP D . F 5 HOH 3 72 72 HOH TIP D . F 5 HOH 4 77 77 HOH TIP D . F 5 HOH 5 81 81 HOH TIP D . G 5 HOH 1 8 8 HOH TIP E . G 5 HOH 2 15 15 HOH TIP E . G 5 HOH 3 28 28 HOH TIP E . G 5 HOH 4 48 48 HOH TIP E . G 5 HOH 5 59 59 HOH TIP E . G 5 HOH 6 75 75 HOH TIP E . G 5 HOH 7 78 78 HOH TIP E . G 5 HOH 8 80 80 HOH TIP E . G 5 HOH 9 94 94 HOH TIP E . G 5 HOH 10 95 95 HOH TIP E . H 5 HOH 1 1 1 HOH TIP B . H 5 HOH 2 3 3 HOH TIP B . H 5 HOH 3 4 4 HOH TIP B . H 5 HOH 4 5 5 HOH TIP B . H 5 HOH 5 6 6 HOH TIP B . H 5 HOH 6 7 7 HOH TIP B . H 5 HOH 7 9 9 HOH TIP B . H 5 HOH 8 10 10 HOH TIP B . H 5 HOH 9 11 11 HOH TIP B . H 5 HOH 10 12 12 HOH TIP B . H 5 HOH 11 13 13 HOH TIP B . H 5 HOH 12 14 14 HOH TIP B . H 5 HOH 13 16 16 HOH TIP B . H 5 HOH 14 17 17 HOH TIP B . H 5 HOH 15 18 18 HOH TIP B . H 5 HOH 16 19 19 HOH TIP B . H 5 HOH 17 20 20 HOH TIP B . H 5 HOH 18 21 21 HOH TIP B . H 5 HOH 19 22 22 HOH TIP B . H 5 HOH 20 23 23 HOH TIP B . H 5 HOH 21 24 24 HOH TIP B . H 5 HOH 22 25 25 HOH TIP B . H 5 HOH 23 26 26 HOH TIP B . H 5 HOH 24 27 27 HOH TIP B . H 5 HOH 25 29 29 HOH TIP B . H 5 HOH 26 30 30 HOH TIP B . H 5 HOH 27 31 31 HOH TIP B . H 5 HOH 28 32 32 HOH TIP B . H 5 HOH 29 33 33 HOH TIP B . H 5 HOH 30 34 34 HOH TIP B . H 5 HOH 31 35 35 HOH TIP B . H 5 HOH 32 36 36 HOH TIP B . H 5 HOH 33 37 37 HOH TIP B . H 5 HOH 34 38 38 HOH TIP B . H 5 HOH 35 39 39 HOH TIP B . H 5 HOH 36 40 40 HOH TIP B . H 5 HOH 37 41 41 HOH TIP B . H 5 HOH 38 42 42 HOH TIP B . H 5 HOH 39 43 43 HOH TIP B . H 5 HOH 40 44 44 HOH TIP B . H 5 HOH 41 45 45 HOH TIP B . H 5 HOH 42 47 47 HOH TIP B . H 5 HOH 43 49 49 HOH TIP B . H 5 HOH 44 50 50 HOH TIP B . H 5 HOH 45 51 51 HOH TIP B . H 5 HOH 46 52 52 HOH TIP B . H 5 HOH 47 53 53 HOH TIP B . H 5 HOH 48 54 54 HOH TIP B . H 5 HOH 49 55 55 HOH TIP B . H 5 HOH 50 56 56 HOH TIP B . H 5 HOH 51 57 57 HOH TIP B . H 5 HOH 52 58 58 HOH TIP B . H 5 HOH 53 60 60 HOH TIP B . H 5 HOH 54 61 61 HOH TIP B . H 5 HOH 55 62 62 HOH TIP B . H 5 HOH 56 64 64 HOH TIP B . H 5 HOH 57 65 65 HOH TIP B . H 5 HOH 58 66 66 HOH TIP B . H 5 HOH 59 67 67 HOH TIP B . H 5 HOH 60 68 68 HOH TIP B . H 5 HOH 61 69 69 HOH TIP B . H 5 HOH 62 71 71 HOH TIP B . H 5 HOH 63 73 73 HOH TIP B . H 5 HOH 64 76 76 HOH TIP B . H 5 HOH 65 82 82 HOH TIP B . H 5 HOH 66 84 84 HOH TIP B . H 5 HOH 67 85 85 HOH TIP B . H 5 HOH 68 86 86 HOH TIP B . H 5 HOH 69 87 87 HOH TIP B . H 5 HOH 70 88 88 HOH TIP B . H 5 HOH 71 90 90 HOH TIP B . H 5 HOH 72 92 92 HOH TIP B . H 5 HOH 73 93 93 HOH TIP B . H 5 HOH 74 96 96 HOH TIP B . H 5 HOH 75 97 97 HOH TIP B . H 5 HOH 76 98 98 HOH TIP B . H 5 HOH 77 99 99 HOH TIP B . H 5 HOH 78 100 100 HOH TIP B . H 5 HOH 79 101 101 HOH TIP B . H 5 HOH 80 102 102 HOH TIP B . H 5 HOH 81 103 103 HOH TIP B . H 5 HOH 82 104 104 HOH TIP B . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id 5CM _pdbx_struct_mod_residue.label_seq_id 6 _pdbx_struct_mod_residue.auth_asym_id E _pdbx_struct_mod_residue.auth_comp_id 5CM _pdbx_struct_mod_residue.auth_seq_id 426 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DC _pdbx_struct_mod_residue.details ? # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 software_defined_assembly PISA dimeric 2 3 software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H 2 1 A,B,F,G 3 1 C,D,E,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4180 ? 1 MORE -6 ? 1 'SSA (A^2)' 12340 ? 2 'ABSA (A^2)' 1040 ? 2 MORE -5 ? 2 'SSA (A^2)' 4770 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-09-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_ref_seq 7 3 'Structure model' struct_ref_seq_dif 8 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_ref_seq.db_align_beg' 5 3 'Structure model' '_struct_ref_seq.db_align_end' 6 3 'Structure model' '_struct_ref_seq_dif.details' 7 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 CNS refinement 1.2 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP B 460 ? ? -138.56 -64.88 2 1 ASN B 508 ? ? 46.32 -123.19 3 1 ASP B 530 ? ? 79.40 74.80 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B GLU 529 ? CG ? C GLU 113 CG 2 1 Y 1 B GLU 529 ? CD ? C GLU 113 CD 3 1 Y 1 B GLU 529 ? OE1 ? C GLU 113 OE1 4 1 Y 1 B GLU 529 ? OE2 ? C GLU 113 OE2 5 1 Y 1 B LYS 547 ? CG ? C LYS 131 CG 6 1 Y 1 B LYS 547 ? CD ? C LYS 131 CD 7 1 Y 1 B LYS 547 ? CE ? C LYS 131 CE 8 1 Y 1 B LYS 547 ? NZ ? C LYS 131 NZ 9 1 Y 1 B ARG 596 ? CG ? C ARG 180 CG 10 1 Y 1 B ARG 596 ? CD ? C ARG 180 CD 11 1 Y 1 B ARG 596 ? NE ? C ARG 180 NE 12 1 Y 1 B ARG 596 ? CZ ? C ARG 180 CZ 13 1 Y 1 B ARG 596 ? NH1 ? C ARG 180 NH1 14 1 Y 1 B ARG 596 ? NH2 ? C ARG 180 NH2 15 1 Y 1 B GLU 597 ? CG ? C GLU 181 CG 16 1 Y 1 B GLU 597 ? CD ? C GLU 181 CD 17 1 Y 1 B GLU 597 ? OE1 ? C GLU 181 OE1 18 1 Y 1 B GLU 597 ? OE2 ? C GLU 181 OE2 19 1 Y 1 B GLU 613 ? CG ? C GLU 197 CG 20 1 Y 1 B GLU 613 ? CD ? C GLU 197 CD 21 1 Y 1 B GLU 613 ? OE1 ? C GLU 197 OE1 22 1 Y 1 B GLU 613 ? OE2 ? C GLU 197 OE2 23 1 Y 1 B GLU 617 ? CG ? C GLU 201 CG 24 1 Y 1 B GLU 617 ? CD ? C GLU 201 CD 25 1 Y 1 B GLU 617 ? OE1 ? C GLU 201 OE1 26 1 Y 1 B GLU 617 ? OE2 ? C GLU 201 OE2 27 1 Y 1 B ASN 621 ? CG ? C ASN 205 CG 28 1 Y 1 B ASN 621 ? OD1 ? C ASN 205 OD1 29 1 Y 1 B ASN 621 ? ND2 ? C ASN 205 ND2 30 1 Y 1 B LYS 622 ? CG ? C LYS 206 CG 31 1 Y 1 B LYS 622 ? CD ? C LYS 206 CD 32 1 Y 1 B LYS 622 ? CE ? C LYS 206 CE 33 1 Y 1 B LYS 622 ? NZ ? C LYS 206 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 D DT 401 ? A DT 1 2 1 Y 1 D DC 402 ? A DC 2 3 1 Y 1 D DC 403 ? A DC 3 4 1 Y 1 D DA 404 ? A DA 4 5 1 Y 1 E DG 433 ? B DG 13 6 1 Y 1 B GLU 623 ? C GLU 207 7 1 Y 1 B LYS 624 ? C LYS 208 8 1 Y 1 B SER 625 ? C SER 209 9 1 Y 1 B ARG 626 ? C ARG 210 10 1 Y 1 B LYS 627 ? C LYS 211 11 1 Y 1 B ARG 628 ? C ARG 212 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 CYS N N N N 111 CYS CA C N R 112 CYS C C N N 113 CYS O O N N 114 CYS CB C N N 115 CYS SG S N N 116 CYS OXT O N N 117 CYS H H N N 118 CYS H2 H N N 119 CYS HA H N N 120 CYS HB2 H N N 121 CYS HB3 H N N 122 CYS HG H N N 123 CYS HXT H N N 124 DA OP3 O N N 125 DA P P N N 126 DA OP1 O N N 127 DA OP2 O N N 128 DA "O5'" O N N 129 DA "C5'" C N N 130 DA "C4'" C N R 131 DA "O4'" O N N 132 DA "C3'" C N S 133 DA "O3'" O N N 134 DA "C2'" C N N 135 DA "C1'" C N R 136 DA N9 N Y N 137 DA C8 C Y N 138 DA N7 N Y N 139 DA C5 C Y N 140 DA C6 C Y N 141 DA N6 N N N 142 DA N1 N Y N 143 DA C2 C Y N 144 DA N3 N Y N 145 DA C4 C Y N 146 DA HOP3 H N N 147 DA HOP2 H N N 148 DA "H5'" H N N 149 DA "H5''" H N N 150 DA "H4'" H N N 151 DA "H3'" H N N 152 DA "HO3'" H N N 153 DA "H2'" H N N 154 DA "H2''" H N N 155 DA "H1'" H N N 156 DA H8 H N N 157 DA H61 H N N 158 DA H62 H N N 159 DA H2 H N N 160 DC OP3 O N N 161 DC P P N N 162 DC OP1 O N N 163 DC OP2 O N N 164 DC "O5'" O N N 165 DC "C5'" C N N 166 DC "C4'" C N R 167 DC "O4'" O N N 168 DC "C3'" C N S 169 DC "O3'" O N N 170 DC "C2'" C N N 171 DC "C1'" C N R 172 DC N1 N N N 173 DC C2 C N N 174 DC O2 O N N 175 DC N3 N N N 176 DC C4 C N N 177 DC N4 N N N 178 DC C5 C N N 179 DC C6 C N N 180 DC HOP3 H N N 181 DC HOP2 H N N 182 DC "H5'" H N N 183 DC "H5''" H N N 184 DC "H4'" H N N 185 DC "H3'" H N N 186 DC "HO3'" H N N 187 DC "H2'" H N N 188 DC "H2''" H N N 189 DC "H1'" H N N 190 DC H41 H N N 191 DC H42 H N N 192 DC H5 H N N 193 DC H6 H N N 194 DG OP3 O N N 195 DG P P N N 196 DG OP1 O N N 197 DG OP2 O N N 198 DG "O5'" O N N 199 DG "C5'" C N N 200 DG "C4'" C N R 201 DG "O4'" O N N 202 DG "C3'" C N S 203 DG "O3'" O N N 204 DG "C2'" C N N 205 DG "C1'" C N R 206 DG N9 N Y N 207 DG C8 C Y N 208 DG N7 N Y N 209 DG C5 C Y N 210 DG C6 C N N 211 DG O6 O N N 212 DG N1 N N N 213 DG C2 C N N 214 DG N2 N N N 215 DG N3 N N N 216 DG C4 C Y N 217 DG HOP3 H N N 218 DG HOP2 H N N 219 DG "H5'" H N N 220 DG "H5''" H N N 221 DG "H4'" H N N 222 DG "H3'" H N N 223 DG "HO3'" H N N 224 DG "H2'" H N N 225 DG "H2''" H N N 226 DG "H1'" H N N 227 DG H8 H N N 228 DG H1 H N N 229 DG H21 H N N 230 DG H22 H N N 231 DT OP3 O N N 232 DT P P N N 233 DT OP1 O N N 234 DT OP2 O N N 235 DT "O5'" O N N 236 DT "C5'" C N N 237 DT "C4'" C N R 238 DT "O4'" O N N 239 DT "C3'" C N S 240 DT "O3'" O N N 241 DT "C2'" C N N 242 DT "C1'" C N R 243 DT N1 N N N 244 DT C2 C N N 245 DT O2 O N N 246 DT N3 N N N 247 DT C4 C N N 248 DT O4 O N N 249 DT C5 C N N 250 DT C7 C N N 251 DT C6 C N N 252 DT HOP3 H N N 253 DT HOP2 H N N 254 DT "H5'" H N N 255 DT "H5''" H N N 256 DT "H4'" H N N 257 DT "H3'" H N N 258 DT "HO3'" H N N 259 DT "H2'" H N N 260 DT "H2''" H N N 261 DT "H1'" H N N 262 DT H3 H N N 263 DT H71 H N N 264 DT H72 H N N 265 DT H73 H N N 266 DT H6 H N N 267 EDO C1 C N N 268 EDO O1 O N N 269 EDO C2 C N N 270 EDO O2 O N N 271 EDO H11 H N N 272 EDO H12 H N N 273 EDO HO1 H N N 274 EDO H21 H N N 275 EDO H22 H N N 276 EDO HO2 H N N 277 GLN N N N N 278 GLN CA C N S 279 GLN C C N N 280 GLN O O N N 281 GLN CB C N N 282 GLN CG C N N 283 GLN CD C N N 284 GLN OE1 O N N 285 GLN NE2 N N N 286 GLN OXT O N N 287 GLN H H N N 288 GLN H2 H N N 289 GLN HA H N N 290 GLN HB2 H N N 291 GLN HB3 H N N 292 GLN HG2 H N N 293 GLN HG3 H N N 294 GLN HE21 H N N 295 GLN HE22 H N N 296 GLN HXT H N N 297 GLU N N N N 298 GLU CA C N S 299 GLU C C N N 300 GLU O O N N 301 GLU CB C N N 302 GLU CG C N N 303 GLU CD C N N 304 GLU OE1 O N N 305 GLU OE2 O N N 306 GLU OXT O N N 307 GLU H H N N 308 GLU H2 H N N 309 GLU HA H N N 310 GLU HB2 H N N 311 GLU HB3 H N N 312 GLU HG2 H N N 313 GLU HG3 H N N 314 GLU HE2 H N N 315 GLU HXT H N N 316 GLY N N N N 317 GLY CA C N N 318 GLY C C N N 319 GLY O O N N 320 GLY OXT O N N 321 GLY H H N N 322 GLY H2 H N N 323 GLY HA2 H N N 324 GLY HA3 H N N 325 GLY HXT H N N 326 HIS N N N N 327 HIS CA C N S 328 HIS C C N N 329 HIS O O N N 330 HIS CB C N N 331 HIS CG C Y N 332 HIS ND1 N Y N 333 HIS CD2 C Y N 334 HIS CE1 C Y N 335 HIS NE2 N Y N 336 HIS OXT O N N 337 HIS H H N N 338 HIS H2 H N N 339 HIS HA H N N 340 HIS HB2 H N N 341 HIS HB3 H N N 342 HIS HD1 H N N 343 HIS HD2 H N N 344 HIS HE1 H N N 345 HIS HE2 H N N 346 HIS HXT H N N 347 HOH O O N N 348 HOH H1 H N N 349 HOH H2 H N N 350 ILE N N N N 351 ILE CA C N S 352 ILE C C N N 353 ILE O O N N 354 ILE CB C N S 355 ILE CG1 C N N 356 ILE CG2 C N N 357 ILE CD1 C N N 358 ILE OXT O N N 359 ILE H H N N 360 ILE H2 H N N 361 ILE HA H N N 362 ILE HB H N N 363 ILE HG12 H N N 364 ILE HG13 H N N 365 ILE HG21 H N N 366 ILE HG22 H N N 367 ILE HG23 H N N 368 ILE HD11 H N N 369 ILE HD12 H N N 370 ILE HD13 H N N 371 ILE HXT H N N 372 LEU N N N N 373 LEU CA C N S 374 LEU C C N N 375 LEU O O N N 376 LEU CB C N N 377 LEU CG C N N 378 LEU CD1 C N N 379 LEU CD2 C N N 380 LEU OXT O N N 381 LEU H H N N 382 LEU H2 H N N 383 LEU HA H N N 384 LEU HB2 H N N 385 LEU HB3 H N N 386 LEU HG H N N 387 LEU HD11 H N N 388 LEU HD12 H N N 389 LEU HD13 H N N 390 LEU HD21 H N N 391 LEU HD22 H N N 392 LEU HD23 H N N 393 LEU HXT H N N 394 LYS N N N N 395 LYS CA C N S 396 LYS C C N N 397 LYS O O N N 398 LYS CB C N N 399 LYS CG C N N 400 LYS CD C N N 401 LYS CE C N N 402 LYS NZ N N N 403 LYS OXT O N N 404 LYS H H N N 405 LYS H2 H N N 406 LYS HA H N N 407 LYS HB2 H N N 408 LYS HB3 H N N 409 LYS HG2 H N N 410 LYS HG3 H N N 411 LYS HD2 H N N 412 LYS HD3 H N N 413 LYS HE2 H N N 414 LYS HE3 H N N 415 LYS HZ1 H N N 416 LYS HZ2 H N N 417 LYS HZ3 H N N 418 LYS HXT H N N 419 MET N N N N 420 MET CA C N S 421 MET C C N N 422 MET O O N N 423 MET CB C N N 424 MET CG C N N 425 MET SD S N N 426 MET CE C N N 427 MET OXT O N N 428 MET H H N N 429 MET H2 H N N 430 MET HA H N N 431 MET HB2 H N N 432 MET HB3 H N N 433 MET HG2 H N N 434 MET HG3 H N N 435 MET HE1 H N N 436 MET HE2 H N N 437 MET HE3 H N N 438 MET HXT H N N 439 PHE N N N N 440 PHE CA C N S 441 PHE C C N N 442 PHE O O N N 443 PHE CB C N N 444 PHE CG C Y N 445 PHE CD1 C Y N 446 PHE CD2 C Y N 447 PHE CE1 C Y N 448 PHE CE2 C Y N 449 PHE CZ C Y N 450 PHE OXT O N N 451 PHE H H N N 452 PHE H2 H N N 453 PHE HA H N N 454 PHE HB2 H N N 455 PHE HB3 H N N 456 PHE HD1 H N N 457 PHE HD2 H N N 458 PHE HE1 H N N 459 PHE HE2 H N N 460 PHE HZ H N N 461 PHE HXT H N N 462 PRO N N N N 463 PRO CA C N S 464 PRO C C N N 465 PRO O O N N 466 PRO CB C N N 467 PRO CG C N N 468 PRO CD C N N 469 PRO OXT O N N 470 PRO H H N N 471 PRO HA H N N 472 PRO HB2 H N N 473 PRO HB3 H N N 474 PRO HG2 H N N 475 PRO HG3 H N N 476 PRO HD2 H N N 477 PRO HD3 H N N 478 PRO HXT H N N 479 SER N N N N 480 SER CA C N S 481 SER C C N N 482 SER O O N N 483 SER CB C N N 484 SER OG O N N 485 SER OXT O N N 486 SER H H N N 487 SER H2 H N N 488 SER HA H N N 489 SER HB2 H N N 490 SER HB3 H N N 491 SER HG H N N 492 SER HXT H N N 493 THR N N N N 494 THR CA C N S 495 THR C C N N 496 THR O O N N 497 THR CB C N R 498 THR OG1 O N N 499 THR CG2 C N N 500 THR OXT O N N 501 THR H H N N 502 THR H2 H N N 503 THR HA H N N 504 THR HB H N N 505 THR HG1 H N N 506 THR HG21 H N N 507 THR HG22 H N N 508 THR HG23 H N N 509 THR HXT H N N 510 TRP N N N N 511 TRP CA C N S 512 TRP C C N N 513 TRP O O N N 514 TRP CB C N N 515 TRP CG C Y N 516 TRP CD1 C Y N 517 TRP CD2 C Y N 518 TRP NE1 N Y N 519 TRP CE2 C Y N 520 TRP CE3 C Y N 521 TRP CZ2 C Y N 522 TRP CZ3 C Y N 523 TRP CH2 C Y N 524 TRP OXT O N N 525 TRP H H N N 526 TRP H2 H N N 527 TRP HA H N N 528 TRP HB2 H N N 529 TRP HB3 H N N 530 TRP HD1 H N N 531 TRP HE1 H N N 532 TRP HE3 H N N 533 TRP HZ2 H N N 534 TRP HZ3 H N N 535 TRP HH2 H N N 536 TRP HXT H N N 537 TYR N N N N 538 TYR CA C N S 539 TYR C C N N 540 TYR O O N N 541 TYR CB C N N 542 TYR CG C Y N 543 TYR CD1 C Y N 544 TYR CD2 C Y N 545 TYR CE1 C Y N 546 TYR CE2 C Y N 547 TYR CZ C Y N 548 TYR OH O N N 549 TYR OXT O N N 550 TYR H H N N 551 TYR H2 H N N 552 TYR HA H N N 553 TYR HB2 H N N 554 TYR HB3 H N N 555 TYR HD1 H N N 556 TYR HD2 H N N 557 TYR HE1 H N N 558 TYR HE2 H N N 559 TYR HH H N N 560 TYR HXT H N N 561 VAL N N N N 562 VAL CA C N S 563 VAL C C N N 564 VAL O O N N 565 VAL CB C N N 566 VAL CG1 C N N 567 VAL CG2 C N N 568 VAL OXT O N N 569 VAL H H N N 570 VAL H2 H N N 571 VAL HA H N N 572 VAL HB H N N 573 VAL HG11 H N N 574 VAL HG12 H N N 575 VAL HG13 H N N 576 VAL HG21 H N N 577 VAL HG22 H N N 578 VAL HG23 H N N 579 VAL HXT H N N 580 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 ALA N CA sing N N 39 ALA N H sing N N 40 ALA N H2 sing N N 41 ALA CA C sing N N 42 ALA CA CB sing N N 43 ALA CA HA sing N N 44 ALA C O doub N N 45 ALA C OXT sing N N 46 ALA CB HB1 sing N N 47 ALA CB HB2 sing N N 48 ALA CB HB3 sing N N 49 ALA OXT HXT sing N N 50 ARG N CA sing N N 51 ARG N H sing N N 52 ARG N H2 sing N N 53 ARG CA C sing N N 54 ARG CA CB sing N N 55 ARG CA HA sing N N 56 ARG C O doub N N 57 ARG C OXT sing N N 58 ARG CB CG sing N N 59 ARG CB HB2 sing N N 60 ARG CB HB3 sing N N 61 ARG CG CD sing N N 62 ARG CG HG2 sing N N 63 ARG CG HG3 sing N N 64 ARG CD NE sing N N 65 ARG CD HD2 sing N N 66 ARG CD HD3 sing N N 67 ARG NE CZ sing N N 68 ARG NE HE sing N N 69 ARG CZ NH1 sing N N 70 ARG CZ NH2 doub N N 71 ARG NH1 HH11 sing N N 72 ARG NH1 HH12 sing N N 73 ARG NH2 HH21 sing N N 74 ARG NH2 HH22 sing N N 75 ARG OXT HXT sing N N 76 ASN N CA sing N N 77 ASN N H sing N N 78 ASN N H2 sing N N 79 ASN CA C sing N N 80 ASN CA CB sing N N 81 ASN CA HA sing N N 82 ASN C O doub N N 83 ASN C OXT sing N N 84 ASN CB CG sing N N 85 ASN CB HB2 sing N N 86 ASN CB HB3 sing N N 87 ASN CG OD1 doub N N 88 ASN CG ND2 sing N N 89 ASN ND2 HD21 sing N N 90 ASN ND2 HD22 sing N N 91 ASN OXT HXT sing N N 92 ASP N CA sing N N 93 ASP N H sing N N 94 ASP N H2 sing N N 95 ASP CA C sing N N 96 ASP CA CB sing N N 97 ASP CA HA sing N N 98 ASP C O doub N N 99 ASP C OXT sing N N 100 ASP CB CG sing N N 101 ASP CB HB2 sing N N 102 ASP CB HB3 sing N N 103 ASP CG OD1 doub N N 104 ASP CG OD2 sing N N 105 ASP OD2 HD2 sing N N 106 ASP OXT HXT sing N N 107 CYS N CA sing N N 108 CYS N H sing N N 109 CYS N H2 sing N N 110 CYS CA C sing N N 111 CYS CA CB sing N N 112 CYS CA HA sing N N 113 CYS C O doub N N 114 CYS C OXT sing N N 115 CYS CB SG sing N N 116 CYS CB HB2 sing N N 117 CYS CB HB3 sing N N 118 CYS SG HG sing N N 119 CYS OXT HXT sing N N 120 DA OP3 P sing N N 121 DA OP3 HOP3 sing N N 122 DA P OP1 doub N N 123 DA P OP2 sing N N 124 DA P "O5'" sing N N 125 DA OP2 HOP2 sing N N 126 DA "O5'" "C5'" sing N N 127 DA "C5'" "C4'" sing N N 128 DA "C5'" "H5'" sing N N 129 DA "C5'" "H5''" sing N N 130 DA "C4'" "O4'" sing N N 131 DA "C4'" "C3'" sing N N 132 DA "C4'" "H4'" sing N N 133 DA "O4'" "C1'" sing N N 134 DA "C3'" "O3'" sing N N 135 DA "C3'" "C2'" sing N N 136 DA "C3'" "H3'" sing N N 137 DA "O3'" "HO3'" sing N N 138 DA "C2'" "C1'" sing N N 139 DA "C2'" "H2'" sing N N 140 DA "C2'" "H2''" sing N N 141 DA "C1'" N9 sing N N 142 DA "C1'" "H1'" sing N N 143 DA N9 C8 sing Y N 144 DA N9 C4 sing Y N 145 DA C8 N7 doub Y N 146 DA C8 H8 sing N N 147 DA N7 C5 sing Y N 148 DA C5 C6 sing Y N 149 DA C5 C4 doub Y N 150 DA C6 N6 sing N N 151 DA C6 N1 doub Y N 152 DA N6 H61 sing N N 153 DA N6 H62 sing N N 154 DA N1 C2 sing Y N 155 DA C2 N3 doub Y N 156 DA C2 H2 sing N N 157 DA N3 C4 sing Y N 158 DC OP3 P sing N N 159 DC OP3 HOP3 sing N N 160 DC P OP1 doub N N 161 DC P OP2 sing N N 162 DC P "O5'" sing N N 163 DC OP2 HOP2 sing N N 164 DC "O5'" "C5'" sing N N 165 DC "C5'" "C4'" sing N N 166 DC "C5'" "H5'" sing N N 167 DC "C5'" "H5''" sing N N 168 DC "C4'" "O4'" sing N N 169 DC "C4'" "C3'" sing N N 170 DC "C4'" "H4'" sing N N 171 DC "O4'" "C1'" sing N N 172 DC "C3'" "O3'" sing N N 173 DC "C3'" "C2'" sing N N 174 DC "C3'" "H3'" sing N N 175 DC "O3'" "HO3'" sing N N 176 DC "C2'" "C1'" sing N N 177 DC "C2'" "H2'" sing N N 178 DC "C2'" "H2''" sing N N 179 DC "C1'" N1 sing N N 180 DC "C1'" "H1'" sing N N 181 DC N1 C2 sing N N 182 DC N1 C6 sing N N 183 DC C2 O2 doub N N 184 DC C2 N3 sing N N 185 DC N3 C4 doub N N 186 DC C4 N4 sing N N 187 DC C4 C5 sing N N 188 DC N4 H41 sing N N 189 DC N4 H42 sing N N 190 DC C5 C6 doub N N 191 DC C5 H5 sing N N 192 DC C6 H6 sing N N 193 DG OP3 P sing N N 194 DG OP3 HOP3 sing N N 195 DG P OP1 doub N N 196 DG P OP2 sing N N 197 DG P "O5'" sing N N 198 DG OP2 HOP2 sing N N 199 DG "O5'" "C5'" sing N N 200 DG "C5'" "C4'" sing N N 201 DG "C5'" "H5'" sing N N 202 DG "C5'" "H5''" sing N N 203 DG "C4'" "O4'" sing N N 204 DG "C4'" "C3'" sing N N 205 DG "C4'" "H4'" sing N N 206 DG "O4'" "C1'" sing N N 207 DG "C3'" "O3'" sing N N 208 DG "C3'" "C2'" sing N N 209 DG "C3'" "H3'" sing N N 210 DG "O3'" "HO3'" sing N N 211 DG "C2'" "C1'" sing N N 212 DG "C2'" "H2'" sing N N 213 DG "C2'" "H2''" sing N N 214 DG "C1'" N9 sing N N 215 DG "C1'" "H1'" sing N N 216 DG N9 C8 sing Y N 217 DG N9 C4 sing Y N 218 DG C8 N7 doub Y N 219 DG C8 H8 sing N N 220 DG N7 C5 sing Y N 221 DG C5 C6 sing N N 222 DG C5 C4 doub Y N 223 DG C6 O6 doub N N 224 DG C6 N1 sing N N 225 DG N1 C2 sing N N 226 DG N1 H1 sing N N 227 DG C2 N2 sing N N 228 DG C2 N3 doub N N 229 DG N2 H21 sing N N 230 DG N2 H22 sing N N 231 DG N3 C4 sing N N 232 DT OP3 P sing N N 233 DT OP3 HOP3 sing N N 234 DT P OP1 doub N N 235 DT P OP2 sing N N 236 DT P "O5'" sing N N 237 DT OP2 HOP2 sing N N 238 DT "O5'" "C5'" sing N N 239 DT "C5'" "C4'" sing N N 240 DT "C5'" "H5'" sing N N 241 DT "C5'" "H5''" sing N N 242 DT "C4'" "O4'" sing N N 243 DT "C4'" "C3'" sing N N 244 DT "C4'" "H4'" sing N N 245 DT "O4'" "C1'" sing N N 246 DT "C3'" "O3'" sing N N 247 DT "C3'" "C2'" sing N N 248 DT "C3'" "H3'" sing N N 249 DT "O3'" "HO3'" sing N N 250 DT "C2'" "C1'" sing N N 251 DT "C2'" "H2'" sing N N 252 DT "C2'" "H2''" sing N N 253 DT "C1'" N1 sing N N 254 DT "C1'" "H1'" sing N N 255 DT N1 C2 sing N N 256 DT N1 C6 sing N N 257 DT C2 O2 doub N N 258 DT C2 N3 sing N N 259 DT N3 C4 sing N N 260 DT N3 H3 sing N N 261 DT C4 O4 doub N N 262 DT C4 C5 sing N N 263 DT C5 C7 sing N N 264 DT C5 C6 doub N N 265 DT C7 H71 sing N N 266 DT C7 H72 sing N N 267 DT C7 H73 sing N N 268 DT C6 H6 sing N N 269 EDO C1 O1 sing N N 270 EDO C1 C2 sing N N 271 EDO C1 H11 sing N N 272 EDO C1 H12 sing N N 273 EDO O1 HO1 sing N N 274 EDO C2 O2 sing N N 275 EDO C2 H21 sing N N 276 EDO C2 H22 sing N N 277 EDO O2 HO2 sing N N 278 GLN N CA sing N N 279 GLN N H sing N N 280 GLN N H2 sing N N 281 GLN CA C sing N N 282 GLN CA CB sing N N 283 GLN CA HA sing N N 284 GLN C O doub N N 285 GLN C OXT sing N N 286 GLN CB CG sing N N 287 GLN CB HB2 sing N N 288 GLN CB HB3 sing N N 289 GLN CG CD sing N N 290 GLN CG HG2 sing N N 291 GLN CG HG3 sing N N 292 GLN CD OE1 doub N N 293 GLN CD NE2 sing N N 294 GLN NE2 HE21 sing N N 295 GLN NE2 HE22 sing N N 296 GLN OXT HXT sing N N 297 GLU N CA sing N N 298 GLU N H sing N N 299 GLU N H2 sing N N 300 GLU CA C sing N N 301 GLU CA CB sing N N 302 GLU CA HA sing N N 303 GLU C O doub N N 304 GLU C OXT sing N N 305 GLU CB CG sing N N 306 GLU CB HB2 sing N N 307 GLU CB HB3 sing N N 308 GLU CG CD sing N N 309 GLU CG HG2 sing N N 310 GLU CG HG3 sing N N 311 GLU CD OE1 doub N N 312 GLU CD OE2 sing N N 313 GLU OE2 HE2 sing N N 314 GLU OXT HXT sing N N 315 GLY N CA sing N N 316 GLY N H sing N N 317 GLY N H2 sing N N 318 GLY CA C sing N N 319 GLY CA HA2 sing N N 320 GLY CA HA3 sing N N 321 GLY C O doub N N 322 GLY C OXT sing N N 323 GLY OXT HXT sing N N 324 HIS N CA sing N N 325 HIS N H sing N N 326 HIS N H2 sing N N 327 HIS CA C sing N N 328 HIS CA CB sing N N 329 HIS CA HA sing N N 330 HIS C O doub N N 331 HIS C OXT sing N N 332 HIS CB CG sing N N 333 HIS CB HB2 sing N N 334 HIS CB HB3 sing N N 335 HIS CG ND1 sing Y N 336 HIS CG CD2 doub Y N 337 HIS ND1 CE1 doub Y N 338 HIS ND1 HD1 sing N N 339 HIS CD2 NE2 sing Y N 340 HIS CD2 HD2 sing N N 341 HIS CE1 NE2 sing Y N 342 HIS CE1 HE1 sing N N 343 HIS NE2 HE2 sing N N 344 HIS OXT HXT sing N N 345 HOH O H1 sing N N 346 HOH O H2 sing N N 347 ILE N CA sing N N 348 ILE N H sing N N 349 ILE N H2 sing N N 350 ILE CA C sing N N 351 ILE CA CB sing N N 352 ILE CA HA sing N N 353 ILE C O doub N N 354 ILE C OXT sing N N 355 ILE CB CG1 sing N N 356 ILE CB CG2 sing N N 357 ILE CB HB sing N N 358 ILE CG1 CD1 sing N N 359 ILE CG1 HG12 sing N N 360 ILE CG1 HG13 sing N N 361 ILE CG2 HG21 sing N N 362 ILE CG2 HG22 sing N N 363 ILE CG2 HG23 sing N N 364 ILE CD1 HD11 sing N N 365 ILE CD1 HD12 sing N N 366 ILE CD1 HD13 sing N N 367 ILE OXT HXT sing N N 368 LEU N CA sing N N 369 LEU N H sing N N 370 LEU N H2 sing N N 371 LEU CA C sing N N 372 LEU CA CB sing N N 373 LEU CA HA sing N N 374 LEU C O doub N N 375 LEU C OXT sing N N 376 LEU CB CG sing N N 377 LEU CB HB2 sing N N 378 LEU CB HB3 sing N N 379 LEU CG CD1 sing N N 380 LEU CG CD2 sing N N 381 LEU CG HG sing N N 382 LEU CD1 HD11 sing N N 383 LEU CD1 HD12 sing N N 384 LEU CD1 HD13 sing N N 385 LEU CD2 HD21 sing N N 386 LEU CD2 HD22 sing N N 387 LEU CD2 HD23 sing N N 388 LEU OXT HXT sing N N 389 LYS N CA sing N N 390 LYS N H sing N N 391 LYS N H2 sing N N 392 LYS CA C sing N N 393 LYS CA CB sing N N 394 LYS CA HA sing N N 395 LYS C O doub N N 396 LYS C OXT sing N N 397 LYS CB CG sing N N 398 LYS CB HB2 sing N N 399 LYS CB HB3 sing N N 400 LYS CG CD sing N N 401 LYS CG HG2 sing N N 402 LYS CG HG3 sing N N 403 LYS CD CE sing N N 404 LYS CD HD2 sing N N 405 LYS CD HD3 sing N N 406 LYS CE NZ sing N N 407 LYS CE HE2 sing N N 408 LYS CE HE3 sing N N 409 LYS NZ HZ1 sing N N 410 LYS NZ HZ2 sing N N 411 LYS NZ HZ3 sing N N 412 LYS OXT HXT sing N N 413 MET N CA sing N N 414 MET N H sing N N 415 MET N H2 sing N N 416 MET CA C sing N N 417 MET CA CB sing N N 418 MET CA HA sing N N 419 MET C O doub N N 420 MET C OXT sing N N 421 MET CB CG sing N N 422 MET CB HB2 sing N N 423 MET CB HB3 sing N N 424 MET CG SD sing N N 425 MET CG HG2 sing N N 426 MET CG HG3 sing N N 427 MET SD CE sing N N 428 MET CE HE1 sing N N 429 MET CE HE2 sing N N 430 MET CE HE3 sing N N 431 MET OXT HXT sing N N 432 PHE N CA sing N N 433 PHE N H sing N N 434 PHE N H2 sing N N 435 PHE CA C sing N N 436 PHE CA CB sing N N 437 PHE CA HA sing N N 438 PHE C O doub N N 439 PHE C OXT sing N N 440 PHE CB CG sing N N 441 PHE CB HB2 sing N N 442 PHE CB HB3 sing N N 443 PHE CG CD1 doub Y N 444 PHE CG CD2 sing Y N 445 PHE CD1 CE1 sing Y N 446 PHE CD1 HD1 sing N N 447 PHE CD2 CE2 doub Y N 448 PHE CD2 HD2 sing N N 449 PHE CE1 CZ doub Y N 450 PHE CE1 HE1 sing N N 451 PHE CE2 CZ sing Y N 452 PHE CE2 HE2 sing N N 453 PHE CZ HZ sing N N 454 PHE OXT HXT sing N N 455 PRO N CA sing N N 456 PRO N CD sing N N 457 PRO N H sing N N 458 PRO CA C sing N N 459 PRO CA CB sing N N 460 PRO CA HA sing N N 461 PRO C O doub N N 462 PRO C OXT sing N N 463 PRO CB CG sing N N 464 PRO CB HB2 sing N N 465 PRO CB HB3 sing N N 466 PRO CG CD sing N N 467 PRO CG HG2 sing N N 468 PRO CG HG3 sing N N 469 PRO CD HD2 sing N N 470 PRO CD HD3 sing N N 471 PRO OXT HXT sing N N 472 SER N CA sing N N 473 SER N H sing N N 474 SER N H2 sing N N 475 SER CA C sing N N 476 SER CA CB sing N N 477 SER CA HA sing N N 478 SER C O doub N N 479 SER C OXT sing N N 480 SER CB OG sing N N 481 SER CB HB2 sing N N 482 SER CB HB3 sing N N 483 SER OG HG sing N N 484 SER OXT HXT sing N N 485 THR N CA sing N N 486 THR N H sing N N 487 THR N H2 sing N N 488 THR CA C sing N N 489 THR CA CB sing N N 490 THR CA HA sing N N 491 THR C O doub N N 492 THR C OXT sing N N 493 THR CB OG1 sing N N 494 THR CB CG2 sing N N 495 THR CB HB sing N N 496 THR OG1 HG1 sing N N 497 THR CG2 HG21 sing N N 498 THR CG2 HG22 sing N N 499 THR CG2 HG23 sing N N 500 THR OXT HXT sing N N 501 TRP N CA sing N N 502 TRP N H sing N N 503 TRP N H2 sing N N 504 TRP CA C sing N N 505 TRP CA CB sing N N 506 TRP CA HA sing N N 507 TRP C O doub N N 508 TRP C OXT sing N N 509 TRP CB CG sing N N 510 TRP CB HB2 sing N N 511 TRP CB HB3 sing N N 512 TRP CG CD1 doub Y N 513 TRP CG CD2 sing Y N 514 TRP CD1 NE1 sing Y N 515 TRP CD1 HD1 sing N N 516 TRP CD2 CE2 doub Y N 517 TRP CD2 CE3 sing Y N 518 TRP NE1 CE2 sing Y N 519 TRP NE1 HE1 sing N N 520 TRP CE2 CZ2 sing Y N 521 TRP CE3 CZ3 doub Y N 522 TRP CE3 HE3 sing N N 523 TRP CZ2 CH2 doub Y N 524 TRP CZ2 HZ2 sing N N 525 TRP CZ3 CH2 sing Y N 526 TRP CZ3 HZ3 sing N N 527 TRP CH2 HH2 sing N N 528 TRP OXT HXT sing N N 529 TYR N CA sing N N 530 TYR N H sing N N 531 TYR N H2 sing N N 532 TYR CA C sing N N 533 TYR CA CB sing N N 534 TYR CA HA sing N N 535 TYR C O doub N N 536 TYR C OXT sing N N 537 TYR CB CG sing N N 538 TYR CB HB2 sing N N 539 TYR CB HB3 sing N N 540 TYR CG CD1 doub Y N 541 TYR CG CD2 sing Y N 542 TYR CD1 CE1 sing Y N 543 TYR CD1 HD1 sing N N 544 TYR CD2 CE2 doub Y N 545 TYR CD2 HD2 sing N N 546 TYR CE1 CZ doub Y N 547 TYR CE1 HE1 sing N N 548 TYR CE2 CZ sing Y N 549 TYR CE2 HE2 sing N N 550 TYR CZ OH sing N N 551 TYR OH HH sing N N 552 TYR OXT HXT sing N N 553 VAL N CA sing N N 554 VAL N H sing N N 555 VAL N H2 sing N N 556 VAL CA C sing N N 557 VAL CA CB sing N N 558 VAL CA HA sing N N 559 VAL C O doub N N 560 VAL C OXT sing N N 561 VAL CB CG1 sing N N 562 VAL CB CG2 sing N N 563 VAL CB HB sing N N 564 VAL CG1 HG11 sing N N 565 VAL CG1 HG12 sing N N 566 VAL CG1 HG13 sing N N 567 VAL CG2 HG21 sing N N 568 VAL CG2 HG22 sing N N 569 VAL CG2 HG23 sing N N 570 VAL OXT HXT sing N N 571 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2ZO1 'b-form double helix' 2ZO1 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 5 1_555 B DA 10 1_555 -0.286 -0.028 0.673 -33.192 8.709 -2.370 1 D_DT405:DA430_E D 405 ? E 430 ? 20 1 1 A DG 6 1_555 B DC 8 1_555 0.350 0.127 -0.287 -5.775 -0.814 -15.017 2 D_DG406:DC428_E D 406 ? E 428 ? ? ? 1 A DC 7 1_555 B DG 7 1_555 0.106 -0.348 0.244 11.696 -17.516 -9.559 3 D_DC407:DG427_E D 407 ? E 427 ? 19 1 1 A DC 9 1_555 B DG 5 1_555 0.016 0.012 -0.104 -0.536 -6.096 -2.270 4 D_DC409:DG425_E D 409 ? E 425 ? 19 1 1 A DT 10 1_555 B DA 4 1_555 0.111 -0.070 -0.006 4.194 -8.604 0.326 5 D_DT410:DA424_E D 410 ? E 424 ? 20 1 1 A DG 11 1_555 B DC 3 1_555 -0.375 -0.035 0.023 2.493 -7.898 -0.125 6 D_DG411:DC423_E D 411 ? E 423 ? 19 1 1 A DA 12 1_555 B DT 2 1_555 0.177 -0.077 -0.062 6.010 -5.194 -2.579 7 D_DA412:DT422_E D 412 ? E 422 ? 20 1 1 A DC 13 1_555 B DG 1 1_555 0.300 -0.038 -0.236 24.383 -8.710 -4.300 8 D_DC413:DG421_E D 413 ? E 421 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 5 1_555 B DA 10 1_555 A DG 6 1_555 B DC 8 1_555 -0.077 1.400 2.921 7.505 -10.256 50.379 2.190 0.519 2.574 -11.833 -8.659 51.856 1 DD_DT405DG406:DC428DA430_EE D 405 ? E 430 ? D 406 ? E 428 ? 1 A DG 6 1_555 B DC 8 1_555 A DC 7 1_555 B DG 7 1_555 -0.799 0.167 2.948 -4.428 4.699 34.698 -0.365 0.714 3.020 7.795 7.346 35.275 2 DD_DG406DC407:DG427DC428_EE D 406 ? E 428 ? D 407 ? E 427 ? 1 A DC 9 1_555 B DG 5 1_555 A DT 10 1_555 B DA 4 1_555 -0.692 0.002 3.332 -0.550 7.748 27.371 -1.812 1.280 3.224 15.970 1.134 28.431 3 DD_DC409DT410:DA424DG425_EE D 409 ? E 425 ? D 410 ? E 424 ? 1 A DT 10 1_555 B DA 4 1_555 A DG 11 1_555 B DC 3 1_555 0.063 0.300 3.362 -0.706 5.823 37.469 -0.310 -0.190 3.367 8.998 1.091 37.909 4 DD_DT410DG411:DC423DA424_EE D 410 ? E 424 ? D 411 ? E 423 ? 1 A DG 11 1_555 B DC 3 1_555 A DA 12 1_555 B DT 2 1_555 -0.349 -0.127 3.260 -1.203 2.221 37.073 -0.495 0.388 3.256 3.487 1.889 37.156 5 DD_DG411DA412:DT422DC423_EE D 411 ? E 423 ? D 412 ? E 422 ? 1 A DA 12 1_555 B DT 2 1_555 A DC 13 1_555 B DG 1 1_555 0.772 -0.523 2.897 0.277 1.890 33.262 -1.190 -1.306 2.870 3.298 -0.483 33.315 6 DD_DA412DC413:DG421DT422_EE D 412 ? E 422 ? D 413 ? E 421 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 1,2-ETHANEDIOL EDO 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2ZO0 _pdbx_initial_refinement_model.details 'PDB ENTRY 2ZO0' #