data_2ZOM # _entry.id 2ZOM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2ZOM pdb_00002zom 10.2210/pdb2zom/pdb RCSB RCSB028230 ? ? WWPDB D_1000028230 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2ZOM _pdbx_database_status.recvd_initial_deposition_date 2008-05-23 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kezuka, Y.' 1 'Bagautdinov, B.' 2 'Katoh, S.' 3 'Ohtake, Y.' 4 'Yutani, K.' 5 'Nonaka, T.' 6 'Katoh, E.' 7 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal structure of CutA1 from Oryza sativa' 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? 1 ;Thermodynamic basis for the stabilities of three CutA1s from Pyrococcus horikoshii,Thermus thermophilus, and Oryza sativa, with unusually high denaturation temperatures ; Biochemistry 47 721 730 2008 BICHAW US 0006-2960 0033 ? 18154307 10.1021/bi701761m # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kezuka, Y.' 1 ? primary 'Bagautdinov, B.' 2 ? primary 'Katoh, S.' 3 ? primary 'Ohtake, Y.' 4 ? primary 'Yutani, K.' 5 ? primary 'Nonaka, T.' 6 ? primary 'Katoh, E.' 7 ? 1 'Sawano, M.' 8 ? 1 'Yamamoto, H.' 9 ? 1 'Ogasahara, K.' 10 ? 1 'Kidokoro, S.' 11 ? 1 'Katoh, S.' 12 ? 1 'Ohnuma, T.' 13 ? 1 'Katoh, E.' 14 ? 1 'Yokoyama, S.' 15 ? 1 'Yutani, K.' 16 ? # _cell.entry_id 2ZOM _cell.length_a 127.214 _cell.length_b 127.214 _cell.length_c 121.868 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2ZOM _symmetry.space_group_name_H-M 'I 41 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein CutA, chloroplast, putative, expressed' 12538.320 3 ? ? 'UNP residues 65-177' ? 2 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 4 water nat water 18.015 3 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name CutA1 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MESTSTTVPSIVVYVTVPNKEAGKRLAGSIISEKLAACVNIVPGIESVYWWEGKVQTDAEELLIIKTRESLLDALTEHVK ANHEYDVPEVIALPIKGGNLKYLEWLKNSTRES ; _entity_poly.pdbx_seq_one_letter_code_can ;MESTSTTVPSIVVYVTVPNKEAGKRLAGSIISEKLAACVNIVPGIESVYWWEGKVQTDAEELLIIKTRESLLDALTEHVK ANHEYDVPEVIALPIKGGNLKYLEWLKNSTRES ; _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 SER n 1 4 THR n 1 5 SER n 1 6 THR n 1 7 THR n 1 8 VAL n 1 9 PRO n 1 10 SER n 1 11 ILE n 1 12 VAL n 1 13 VAL n 1 14 TYR n 1 15 VAL n 1 16 THR n 1 17 VAL n 1 18 PRO n 1 19 ASN n 1 20 LYS n 1 21 GLU n 1 22 ALA n 1 23 GLY n 1 24 LYS n 1 25 ARG n 1 26 LEU n 1 27 ALA n 1 28 GLY n 1 29 SER n 1 30 ILE n 1 31 ILE n 1 32 SER n 1 33 GLU n 1 34 LYS n 1 35 LEU n 1 36 ALA n 1 37 ALA n 1 38 CYS n 1 39 VAL n 1 40 ASN n 1 41 ILE n 1 42 VAL n 1 43 PRO n 1 44 GLY n 1 45 ILE n 1 46 GLU n 1 47 SER n 1 48 VAL n 1 49 TYR n 1 50 TRP n 1 51 TRP n 1 52 GLU n 1 53 GLY n 1 54 LYS n 1 55 VAL n 1 56 GLN n 1 57 THR n 1 58 ASP n 1 59 ALA n 1 60 GLU n 1 61 GLU n 1 62 LEU n 1 63 LEU n 1 64 ILE n 1 65 ILE n 1 66 LYS n 1 67 THR n 1 68 ARG n 1 69 GLU n 1 70 SER n 1 71 LEU n 1 72 LEU n 1 73 ASP n 1 74 ALA n 1 75 LEU n 1 76 THR n 1 77 GLU n 1 78 HIS n 1 79 VAL n 1 80 LYS n 1 81 ALA n 1 82 ASN n 1 83 HIS n 1 84 GLU n 1 85 TYR n 1 86 ASP n 1 87 VAL n 1 88 PRO n 1 89 GLU n 1 90 VAL n 1 91 ILE n 1 92 ALA n 1 93 LEU n 1 94 PRO n 1 95 ILE n 1 96 LYS n 1 97 GLY n 1 98 GLY n 1 99 ASN n 1 100 LEU n 1 101 LYS n 1 102 TYR n 1 103 LEU n 1 104 GLU n 1 105 TRP n 1 106 LEU n 1 107 LYS n 1 108 ASN n 1 109 SER n 1 110 THR n 1 111 ARG n 1 112 GLU n 1 113 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Japanese rice' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details 'Tsunoda et al. (2005). Protein Expression Purif. 42, 268-277.' _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Oryza sativa subsp. japonica' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 39947 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pDEST-his vector' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q109R6_ORYSJ _struct_ref.pdbx_db_accession Q109R6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MESTSTTVPSIVVYVTVPNKEAGKRLAGSIISEKLAACVNIVPGIESVYWWEGKVQTDAEELLIIKTRESLLDALTEHVK ANHEYDVPEVIALPIKGGNLKYLEWLKNSTRES ; _struct_ref.pdbx_align_begin 65 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2ZOM A 1 ? 113 ? Q109R6 65 ? 177 ? 1 113 2 1 2ZOM B 1 ? 113 ? Q109R6 65 ? 177 ? 1 113 3 1 2ZOM C 1 ? 113 ? Q109R6 65 ? 177 ? 1 113 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2ZOM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.28 _exptl_crystal.density_percent_sol 62.47 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details ;1.8M Ammonium sulfate, 0.09M tri-Sodium citrate dihydrate pH5.6, 0.18M potassium sodium tartrate tetrahydrate, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU JUPITER 210' _diffrn_detector.pdbx_collection_date 2006-07-04 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator graphite _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL26B1' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL26B1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1 # _reflns.entry_id 2ZOM _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 3.020 _reflns.d_resolution_low 63.628 _reflns.number_all 10138 _reflns.number_obs 10138 _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.061 _reflns.pdbx_Rsym_value 0.061 _reflns.pdbx_netI_over_sigmaI 8.0 _reflns.B_iso_Wilson_estimate 76.463 _reflns.pdbx_redundancy 10.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 3.02 _reflns_shell.d_res_low 3.10 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.231 _reflns_shell.pdbx_Rsym_value 0.231 _reflns_shell.meanI_over_sigI_obs 3.1 _reflns_shell.pdbx_redundancy 10.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 742 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2ZOM _refine.ls_number_reflns_obs 9635 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 63.61 _refine.ls_d_res_high 3.02 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.18237 _refine.ls_R_factor_all 0.18237 _refine.ls_R_factor_R_work 0.17826 _refine.ls_R_factor_R_free 0.26674 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 490 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.945 _refine.correlation_coeff_Fo_to_Fc_free 0.881 _refine.B_iso_mean 55.314 _refine.aniso_B[1][1] 0.78 _refine.aniso_B[2][2] 0.78 _refine.aniso_B[3][3] -1.57 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 2ZFH' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.423 _refine.overall_SU_ML 0.283 _refine.overall_SU_B 15.553 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2534 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.number_atoms_solvent 3 _refine_hist.number_atoms_total 2570 _refine_hist.d_res_high 3.02 _refine_hist.d_res_low 63.61 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.020 0.019 ? 2609 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 2446 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.204 1.984 ? 3552 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.023 3.000 ? 5713 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 9.728 5.000 ? 321 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 44.699 25.408 ? 98 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 20.566 15.000 ? 464 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.239 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.123 0.200 ? 423 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 2785 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 447 'X-RAY DIFFRACTION' ? r_nbd_refined 0.230 0.200 ? 612 'X-RAY DIFFRACTION' ? r_nbd_other 0.191 0.200 ? 2605 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.189 0.200 ? 1300 'X-RAY DIFFRACTION' ? r_nbtor_other 0.099 0.200 ? 1660 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.201 0.200 ? 83 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.188 0.200 ? 14 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.284 0.200 ? 52 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.173 0.200 ? 5 'X-RAY DIFFRACTION' ? r_mcbond_it 1.097 1.500 ? 2031 'X-RAY DIFFRACTION' ? r_mcbond_other 0.162 1.500 ? 657 'X-RAY DIFFRACTION' ? r_mcangle_it 1.380 2.000 ? 2638 'X-RAY DIFFRACTION' ? r_scbond_it 1.956 3.000 ? 1155 'X-RAY DIFFRACTION' ? r_scangle_it 2.874 4.500 ? 914 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.020 _refine_ls_shell.d_res_low 3.098 _refine_ls_shell.number_reflns_R_work 703 _refine_ls_shell.R_factor_R_work 0.253 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.308 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 35 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2ZOM _struct.title 'Crystal structure of CutA1 from Oryza sativa' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2ZOM _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.text 'Trimeric structure, Protein stability, unknown function' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 2 ? G N N 3 ? H N N 2 ? I N N 3 ? J N N 4 ? K N N 4 ? L N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 19 ? GLU A 33 ? ASN A 19 GLU A 33 1 ? 15 HELX_P HELX_P2 2 LEU A 71 ? ASN A 82 ? LEU A 71 ASN A 82 1 ? 12 HELX_P HELX_P3 3 ASN A 99 ? THR A 110 ? ASN A 99 THR A 110 1 ? 12 HELX_P HELX_P4 4 ASN B 19 ? GLU B 33 ? ASN B 19 GLU B 33 1 ? 15 HELX_P HELX_P5 5 LEU B 71 ? ASN B 82 ? LEU B 71 ASN B 82 1 ? 12 HELX_P HELX_P6 6 ASN B 99 ? ASN B 108 ? ASN B 99 ASN B 108 1 ? 10 HELX_P HELX_P7 7 ASN C 19 ? GLU C 33 ? ASN C 19 GLU C 33 1 ? 15 HELX_P HELX_P8 8 LEU C 71 ? ASN C 82 ? LEU C 71 ASN C 82 1 ? 12 HELX_P HELX_P9 9 ASN C 99 ? THR C 110 ? ASN C 99 THR C 110 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 91 ? PRO A 94 ? ILE A 91 PRO A 94 A 2 SER A 10 ? VAL A 17 ? SER A 10 VAL A 17 A 3 LYS A 54 ? ARG A 68 ? LYS A 54 ARG A 68 A 4 CYS A 38 ? TRP A 51 ? CYS A 38 TRP A 51 A 5 CYS B 38 ? TRP B 50 ? CYS B 38 TRP B 50 A 6 VAL B 55 ? ARG B 68 ? VAL B 55 ARG B 68 A 7 SER B 10 ? VAL B 17 ? SER B 10 VAL B 17 A 8 ILE B 91 ? PRO B 94 ? ILE B 91 PRO B 94 B 1 ILE A 91 ? PRO A 94 ? ILE A 91 PRO A 94 B 2 SER A 10 ? VAL A 17 ? SER A 10 VAL A 17 B 3 LYS A 54 ? ARG A 68 ? LYS A 54 ARG A 68 B 4 CYS A 38 ? TRP A 51 ? CYS A 38 TRP A 51 B 5 CYS C 38 ? TRP C 51 ? CYS C 38 TRP C 51 B 6 LYS C 54 ? ARG C 68 ? LYS C 54 ARG C 68 B 7 SER C 10 ? VAL C 17 ? SER C 10 VAL C 17 B 8 VAL C 90 ? ILE C 95 ? VAL C 90 ILE C 95 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 91 ? O ILE A 91 N TYR A 14 ? N TYR A 14 A 2 3 N VAL A 13 ? N VAL A 13 O ILE A 65 ? O ILE A 65 A 3 4 O LEU A 62 ? O LEU A 62 N VAL A 42 ? N VAL A 42 A 4 5 N ILE A 41 ? N ILE A 41 O GLU B 46 ? O GLU B 46 A 5 6 N ASN B 40 ? N ASN B 40 O ILE B 64 ? O ILE B 64 A 6 7 O LEU B 63 ? O LEU B 63 N VAL B 15 ? N VAL B 15 A 7 8 N VAL B 12 ? N VAL B 12 O LEU B 93 ? O LEU B 93 B 1 2 O ILE A 91 ? O ILE A 91 N TYR A 14 ? N TYR A 14 B 2 3 N VAL A 13 ? N VAL A 13 O ILE A 65 ? O ILE A 65 B 3 4 O LEU A 62 ? O LEU A 62 N VAL A 42 ? N VAL A 42 B 4 5 N VAL A 48 ? N VAL A 48 O VAL C 39 ? O VAL C 39 B 5 6 N TYR C 49 ? N TYR C 49 O GLN C 56 ? O GLN C 56 B 6 7 O THR C 67 ? O THR C 67 N ILE C 11 ? N ILE C 11 B 7 8 N TYR C 14 ? N TYR C 14 O ILE C 91 ? O ILE C 91 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 115 ? 6 'BINDING SITE FOR RESIDUE GOL A 115' AC2 Software A SO4 114 ? 7 'BINDING SITE FOR RESIDUE SO4 A 114' AC3 Software B GOL 115 ? 4 'BINDING SITE FOR RESIDUE GOL B 115' AC4 Software B SO4 114 ? 5 'BINDING SITE FOR RESIDUE SO4 B 114' AC5 Software C GOL 115 ? 6 'BINDING SITE FOR RESIDUE GOL C 115' AC6 Software C SO4 114 ? 5 'BINDING SITE FOR RESIDUE SO4 C 114' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLU A 33 ? GLU A 33 . ? 6_555 ? 2 AC1 6 GLU A 33 ? GLU A 33 . ? 1_555 ? 3 AC1 6 HIS A 78 ? HIS A 78 . ? 6_555 ? 4 AC1 6 ALA A 81 ? ALA A 81 . ? 1_555 ? 5 AC1 6 ASN A 82 ? ASN A 82 . ? 1_555 ? 6 AC1 6 ASN A 82 ? ASN A 82 . ? 6_555 ? 7 AC2 7 THR A 7 ? THR A 7 . ? 1_555 ? 8 AC2 7 VAL A 8 ? VAL A 8 . ? 1_555 ? 9 AC2 7 PRO A 9 ? PRO A 9 . ? 1_555 ? 10 AC2 7 SER A 10 ? SER A 10 . ? 1_555 ? 11 AC2 7 ILE A 95 ? ILE A 95 . ? 1_555 ? 12 AC2 7 GLY A 97 ? GLY A 97 . ? 1_555 ? 13 AC2 7 LEU A 103 ? LEU A 103 . ? 1_555 ? 14 AC3 4 LYS A 101 ? LYS A 101 . ? 16_555 ? 15 AC3 4 TRP B 50 ? TRP B 50 . ? 1_555 ? 16 AC3 4 GLU B 52 ? GLU B 52 . ? 1_555 ? 17 AC3 4 GLY B 53 ? GLY B 53 . ? 1_555 ? 18 AC4 5 PRO B 9 ? PRO B 9 . ? 1_555 ? 19 AC4 5 SER B 10 ? SER B 10 . ? 1_555 ? 20 AC4 5 ILE B 95 ? ILE B 95 . ? 1_555 ? 21 AC4 5 LYS B 96 ? LYS B 96 . ? 1_555 ? 22 AC4 5 GLY B 97 ? GLY B 97 . ? 1_555 ? 23 AC5 6 GLU C 33 ? GLU C 33 . ? 1_555 ? 24 AC5 6 GLU C 33 ? GLU C 33 . ? 10_555 ? 25 AC5 6 HIS C 78 ? HIS C 78 . ? 10_555 ? 26 AC5 6 HIS C 78 ? HIS C 78 . ? 1_555 ? 27 AC5 6 ALA C 81 ? ALA C 81 . ? 10_555 ? 28 AC5 6 ASN C 82 ? ASN C 82 . ? 10_555 ? 29 AC6 5 VAL C 8 ? VAL C 8 . ? 1_555 ? 30 AC6 5 PRO C 9 ? PRO C 9 . ? 1_555 ? 31 AC6 5 SER C 10 ? SER C 10 . ? 1_555 ? 32 AC6 5 ILE C 95 ? ILE C 95 . ? 1_555 ? 33 AC6 5 GLY C 97 ? GLY C 97 . ? 1_555 ? # _database_PDB_matrix.entry_id 2ZOM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2ZOM _atom_sites.fract_transf_matrix[1][1] 0.007861 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007861 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008206 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 SER 3 3 ? ? ? A . n A 1 4 THR 4 4 ? ? ? A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 TYR 14 14 14 TYR TYR A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 CYS 38 38 38 CYS CYS A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 SER 47 47 47 SER SER A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 TRP 50 50 50 TRP TRP A . n A 1 51 TRP 51 51 51 TRP TRP A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 GLN 56 56 56 GLN GLN A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 THR 76 76 76 THR THR A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 HIS 78 78 78 HIS HIS A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 ASN 82 82 82 ASN ASN A . n A 1 83 HIS 83 83 83 HIS HIS A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 TYR 85 85 85 TYR TYR A . n A 1 86 ASP 86 86 86 ASP ASP A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 PRO 88 88 88 PRO PRO A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 ILE 91 91 91 ILE ILE A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 TRP 105 105 105 TRP TRP A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 ASN 108 108 108 ASN ASN A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 THR 110 110 110 THR THR A . n A 1 111 ARG 111 111 111 ARG ARG A . n A 1 112 GLU 112 112 ? ? ? A . n A 1 113 SER 113 113 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 GLU 2 2 ? ? ? B . n B 1 3 SER 3 3 ? ? ? B . n B 1 4 THR 4 4 ? ? ? B . n B 1 5 SER 5 5 ? ? ? B . n B 1 6 THR 6 6 6 THR THR B . n B 1 7 THR 7 7 7 THR THR B . n B 1 8 VAL 8 8 8 VAL VAL B . n B 1 9 PRO 9 9 9 PRO PRO B . n B 1 10 SER 10 10 10 SER SER B . n B 1 11 ILE 11 11 11 ILE ILE B . n B 1 12 VAL 12 12 12 VAL VAL B . n B 1 13 VAL 13 13 13 VAL VAL B . n B 1 14 TYR 14 14 14 TYR TYR B . n B 1 15 VAL 15 15 15 VAL VAL B . n B 1 16 THR 16 16 16 THR THR B . n B 1 17 VAL 17 17 17 VAL VAL B . n B 1 18 PRO 18 18 18 PRO PRO B . n B 1 19 ASN 19 19 19 ASN ASN B . n B 1 20 LYS 20 20 20 LYS LYS B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 GLY 23 23 23 GLY GLY B . n B 1 24 LYS 24 24 24 LYS LYS B . n B 1 25 ARG 25 25 25 ARG ARG B . n B 1 26 LEU 26 26 26 LEU LEU B . n B 1 27 ALA 27 27 27 ALA ALA B . n B 1 28 GLY 28 28 28 GLY GLY B . n B 1 29 SER 29 29 29 SER SER B . n B 1 30 ILE 30 30 30 ILE ILE B . n B 1 31 ILE 31 31 31 ILE ILE B . n B 1 32 SER 32 32 32 SER SER B . n B 1 33 GLU 33 33 33 GLU GLU B . n B 1 34 LYS 34 34 34 LYS LYS B . n B 1 35 LEU 35 35 35 LEU LEU B . n B 1 36 ALA 36 36 36 ALA ALA B . n B 1 37 ALA 37 37 37 ALA ALA B . n B 1 38 CYS 38 38 38 CYS CYS B . n B 1 39 VAL 39 39 39 VAL VAL B . n B 1 40 ASN 40 40 40 ASN ASN B . n B 1 41 ILE 41 41 41 ILE ILE B . n B 1 42 VAL 42 42 42 VAL VAL B . n B 1 43 PRO 43 43 43 PRO PRO B . n B 1 44 GLY 44 44 44 GLY GLY B . n B 1 45 ILE 45 45 45 ILE ILE B . n B 1 46 GLU 46 46 46 GLU GLU B . n B 1 47 SER 47 47 47 SER SER B . n B 1 48 VAL 48 48 48 VAL VAL B . n B 1 49 TYR 49 49 49 TYR TYR B . n B 1 50 TRP 50 50 50 TRP TRP B . n B 1 51 TRP 51 51 51 TRP TRP B . n B 1 52 GLU 52 52 52 GLU GLU B . n B 1 53 GLY 53 53 53 GLY GLY B . n B 1 54 LYS 54 54 54 LYS LYS B . n B 1 55 VAL 55 55 55 VAL VAL B . n B 1 56 GLN 56 56 56 GLN GLN B . n B 1 57 THR 57 57 57 THR THR B . n B 1 58 ASP 58 58 58 ASP ASP B . n B 1 59 ALA 59 59 59 ALA ALA B . n B 1 60 GLU 60 60 60 GLU GLU B . n B 1 61 GLU 61 61 61 GLU GLU B . n B 1 62 LEU 62 62 62 LEU LEU B . n B 1 63 LEU 63 63 63 LEU LEU B . n B 1 64 ILE 64 64 64 ILE ILE B . n B 1 65 ILE 65 65 65 ILE ILE B . n B 1 66 LYS 66 66 66 LYS LYS B . n B 1 67 THR 67 67 67 THR THR B . n B 1 68 ARG 68 68 68 ARG ARG B . n B 1 69 GLU 69 69 69 GLU GLU B . n B 1 70 SER 70 70 70 SER SER B . n B 1 71 LEU 71 71 71 LEU LEU B . n B 1 72 LEU 72 72 72 LEU LEU B . n B 1 73 ASP 73 73 73 ASP ASP B . n B 1 74 ALA 74 74 74 ALA ALA B . n B 1 75 LEU 75 75 75 LEU LEU B . n B 1 76 THR 76 76 76 THR THR B . n B 1 77 GLU 77 77 77 GLU GLU B . n B 1 78 HIS 78 78 78 HIS HIS B . n B 1 79 VAL 79 79 79 VAL VAL B . n B 1 80 LYS 80 80 80 LYS LYS B . n B 1 81 ALA 81 81 81 ALA ALA B . n B 1 82 ASN 82 82 82 ASN ASN B . n B 1 83 HIS 83 83 83 HIS HIS B . n B 1 84 GLU 84 84 84 GLU GLU B . n B 1 85 TYR 85 85 85 TYR TYR B . n B 1 86 ASP 86 86 86 ASP ASP B . n B 1 87 VAL 87 87 87 VAL VAL B . n B 1 88 PRO 88 88 88 PRO PRO B . n B 1 89 GLU 89 89 89 GLU GLU B . n B 1 90 VAL 90 90 90 VAL VAL B . n B 1 91 ILE 91 91 91 ILE ILE B . n B 1 92 ALA 92 92 92 ALA ALA B . n B 1 93 LEU 93 93 93 LEU LEU B . n B 1 94 PRO 94 94 94 PRO PRO B . n B 1 95 ILE 95 95 95 ILE ILE B . n B 1 96 LYS 96 96 96 LYS LYS B . n B 1 97 GLY 97 97 97 GLY GLY B . n B 1 98 GLY 98 98 98 GLY GLY B . n B 1 99 ASN 99 99 99 ASN ASN B . n B 1 100 LEU 100 100 100 LEU LEU B . n B 1 101 LYS 101 101 101 LYS LYS B . n B 1 102 TYR 102 102 102 TYR TYR B . n B 1 103 LEU 103 103 103 LEU LEU B . n B 1 104 GLU 104 104 104 GLU GLU B . n B 1 105 TRP 105 105 105 TRP TRP B . n B 1 106 LEU 106 106 106 LEU LEU B . n B 1 107 LYS 107 107 107 LYS LYS B . n B 1 108 ASN 108 108 108 ASN ASN B . n B 1 109 SER 109 109 109 SER SER B . n B 1 110 THR 110 110 110 THR THR B . n B 1 111 ARG 111 111 111 ARG ARG B . n B 1 112 GLU 112 112 112 GLU GLU B . n B 1 113 SER 113 113 113 SER SER B . n C 1 1 MET 1 1 ? ? ? C . n C 1 2 GLU 2 2 ? ? ? C . n C 1 3 SER 3 3 ? ? ? C . n C 1 4 THR 4 4 ? ? ? C . n C 1 5 SER 5 5 5 SER SER C . n C 1 6 THR 6 6 6 THR THR C . n C 1 7 THR 7 7 7 THR THR C . n C 1 8 VAL 8 8 8 VAL VAL C . n C 1 9 PRO 9 9 9 PRO PRO C . n C 1 10 SER 10 10 10 SER SER C . n C 1 11 ILE 11 11 11 ILE ILE C . n C 1 12 VAL 12 12 12 VAL VAL C . n C 1 13 VAL 13 13 13 VAL VAL C . n C 1 14 TYR 14 14 14 TYR TYR C . n C 1 15 VAL 15 15 15 VAL VAL C . n C 1 16 THR 16 16 16 THR THR C . n C 1 17 VAL 17 17 17 VAL VAL C . n C 1 18 PRO 18 18 18 PRO PRO C . n C 1 19 ASN 19 19 19 ASN ASN C . n C 1 20 LYS 20 20 20 LYS LYS C . n C 1 21 GLU 21 21 21 GLU GLU C . n C 1 22 ALA 22 22 22 ALA ALA C . n C 1 23 GLY 23 23 23 GLY GLY C . n C 1 24 LYS 24 24 24 LYS LYS C . n C 1 25 ARG 25 25 25 ARG ARG C . n C 1 26 LEU 26 26 26 LEU LEU C . n C 1 27 ALA 27 27 27 ALA ALA C . n C 1 28 GLY 28 28 28 GLY GLY C . n C 1 29 SER 29 29 29 SER SER C . n C 1 30 ILE 30 30 30 ILE ILE C . n C 1 31 ILE 31 31 31 ILE ILE C . n C 1 32 SER 32 32 32 SER SER C . n C 1 33 GLU 33 33 33 GLU GLU C . n C 1 34 LYS 34 34 34 LYS LYS C . n C 1 35 LEU 35 35 35 LEU LEU C . n C 1 36 ALA 36 36 36 ALA ALA C . n C 1 37 ALA 37 37 37 ALA ALA C . n C 1 38 CYS 38 38 38 CYS CYS C . n C 1 39 VAL 39 39 39 VAL VAL C . n C 1 40 ASN 40 40 40 ASN ASN C . n C 1 41 ILE 41 41 41 ILE ILE C . n C 1 42 VAL 42 42 42 VAL VAL C . n C 1 43 PRO 43 43 43 PRO PRO C . n C 1 44 GLY 44 44 44 GLY GLY C . n C 1 45 ILE 45 45 45 ILE ILE C . n C 1 46 GLU 46 46 46 GLU GLU C . n C 1 47 SER 47 47 47 SER SER C . n C 1 48 VAL 48 48 48 VAL VAL C . n C 1 49 TYR 49 49 49 TYR TYR C . n C 1 50 TRP 50 50 50 TRP TRP C . n C 1 51 TRP 51 51 51 TRP TRP C . n C 1 52 GLU 52 52 52 GLU GLU C . n C 1 53 GLY 53 53 53 GLY GLY C . n C 1 54 LYS 54 54 54 LYS LYS C . n C 1 55 VAL 55 55 55 VAL VAL C . n C 1 56 GLN 56 56 56 GLN GLN C . n C 1 57 THR 57 57 57 THR THR C . n C 1 58 ASP 58 58 58 ASP ASP C . n C 1 59 ALA 59 59 59 ALA ALA C . n C 1 60 GLU 60 60 60 GLU GLU C . n C 1 61 GLU 61 61 61 GLU GLU C . n C 1 62 LEU 62 62 62 LEU LEU C . n C 1 63 LEU 63 63 63 LEU LEU C . n C 1 64 ILE 64 64 64 ILE ILE C . n C 1 65 ILE 65 65 65 ILE ILE C . n C 1 66 LYS 66 66 66 LYS LYS C . n C 1 67 THR 67 67 67 THR THR C . n C 1 68 ARG 68 68 68 ARG ARG C . n C 1 69 GLU 69 69 69 GLU GLU C . n C 1 70 SER 70 70 70 SER SER C . n C 1 71 LEU 71 71 71 LEU LEU C . n C 1 72 LEU 72 72 72 LEU LEU C . n C 1 73 ASP 73 73 73 ASP ASP C . n C 1 74 ALA 74 74 74 ALA ALA C . n C 1 75 LEU 75 75 75 LEU LEU C . n C 1 76 THR 76 76 76 THR THR C . n C 1 77 GLU 77 77 77 GLU GLU C . n C 1 78 HIS 78 78 78 HIS HIS C . n C 1 79 VAL 79 79 79 VAL VAL C . n C 1 80 LYS 80 80 80 LYS LYS C . n C 1 81 ALA 81 81 81 ALA ALA C . n C 1 82 ASN 82 82 82 ASN ASN C . n C 1 83 HIS 83 83 83 HIS HIS C . n C 1 84 GLU 84 84 84 GLU GLU C . n C 1 85 TYR 85 85 85 TYR TYR C . n C 1 86 ASP 86 86 86 ASP ASP C . n C 1 87 VAL 87 87 87 VAL VAL C . n C 1 88 PRO 88 88 88 PRO PRO C . n C 1 89 GLU 89 89 89 GLU GLU C . n C 1 90 VAL 90 90 90 VAL VAL C . n C 1 91 ILE 91 91 91 ILE ILE C . n C 1 92 ALA 92 92 92 ALA ALA C . n C 1 93 LEU 93 93 93 LEU LEU C . n C 1 94 PRO 94 94 94 PRO PRO C . n C 1 95 ILE 95 95 95 ILE ILE C . n C 1 96 LYS 96 96 96 LYS LYS C . n C 1 97 GLY 97 97 97 GLY GLY C . n C 1 98 GLY 98 98 98 GLY GLY C . n C 1 99 ASN 99 99 99 ASN ASN C . n C 1 100 LEU 100 100 100 LEU LEU C . n C 1 101 LYS 101 101 101 LYS LYS C . n C 1 102 TYR 102 102 102 TYR TYR C . n C 1 103 LEU 103 103 103 LEU LEU C . n C 1 104 GLU 104 104 104 GLU GLU C . n C 1 105 TRP 105 105 105 TRP TRP C . n C 1 106 LEU 106 106 106 LEU LEU C . n C 1 107 LYS 107 107 107 LYS LYS C . n C 1 108 ASN 108 108 108 ASN ASN C . n C 1 109 SER 109 109 109 SER SER C . n C 1 110 THR 110 110 110 THR THR C . n C 1 111 ARG 111 111 111 ARG ARG C . n C 1 112 GLU 112 112 112 GLU GLU C . n C 1 113 SER 113 113 113 SER SER C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 GOL 1 115 2 GOL GOL A . E 3 SO4 1 114 1 SO4 SO4 A . F 2 GOL 1 115 1 GOL GOL B . G 3 SO4 1 114 2 SO4 SO4 B . H 2 GOL 1 115 3 GOL GOL C . I 3 SO4 1 114 3 SO4 SO4 C . J 4 HOH 1 116 2 HOH HOH A . K 4 HOH 1 116 3 HOH HOH B . L 4 HOH 1 116 1 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7210 ? 1 MORE -93 ? 1 'SSA (A^2)' 13780 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-05-26 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OH _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 TYR _pdbx_validate_close_contact.auth_seq_id_1 14 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OH _pdbx_validate_close_contact.auth_asym_id_2 C _pdbx_validate_close_contact.auth_comp_id_2 TYR _pdbx_validate_close_contact.auth_seq_id_2 14 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.10 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CE3 _pdbx_validate_rmsd_bond.auth_asym_id_1 C _pdbx_validate_rmsd_bond.auth_comp_id_1 TRP _pdbx_validate_rmsd_bond.auth_seq_id_1 51 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CZ3 _pdbx_validate_rmsd_bond.auth_asym_id_2 C _pdbx_validate_rmsd_bond.auth_comp_id_2 TRP _pdbx_validate_rmsd_bond.auth_seq_id_2 51 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.491 _pdbx_validate_rmsd_bond.bond_target_value 1.380 _pdbx_validate_rmsd_bond.bond_deviation 0.111 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.017 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 82 ? ? -116.89 52.29 2 1 VAL A 87 ? ? -118.86 76.65 3 1 LYS A 96 ? ? -102.98 72.11 4 1 ASN A 99 ? ? -34.12 109.42 5 1 THR B 7 ? ? -167.67 79.08 6 1 PRO B 9 ? ? -28.36 113.09 7 1 SER B 29 ? ? -38.14 -31.35 8 1 GLU B 33 ? ? -79.23 39.21 9 1 LYS B 34 ? ? 49.28 23.12 10 1 CYS B 38 ? ? 171.26 133.85 11 1 SER B 70 ? ? -8.40 -60.40 12 1 LYS B 96 ? ? -154.29 56.70 13 1 ASN B 99 ? ? -64.81 94.37 14 1 LYS B 107 ? ? -28.93 -63.76 15 1 ASN B 108 ? ? -69.35 12.12 16 1 THR C 7 ? ? 177.61 55.73 17 1 GLU C 33 ? ? -67.51 2.01 18 1 CYS C 38 ? ? -179.74 130.83 19 1 ASN C 82 ? ? -98.84 58.45 20 1 VAL C 87 ? ? -111.33 79.12 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 SER A 5 ? ? THR A 6 ? ? 144.82 2 1 THR C 6 ? ? THR C 7 ? ? -87.17 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A SER 3 ? A SER 3 4 1 Y 1 A THR 4 ? A THR 4 5 1 Y 1 A GLU 112 ? A GLU 112 6 1 Y 1 A SER 113 ? A SER 113 7 1 Y 1 B MET 1 ? B MET 1 8 1 Y 1 B GLU 2 ? B GLU 2 9 1 Y 1 B SER 3 ? B SER 3 10 1 Y 1 B THR 4 ? B THR 4 11 1 Y 1 B SER 5 ? B SER 5 12 1 Y 1 C MET 1 ? C MET 1 13 1 Y 1 C GLU 2 ? C GLU 2 14 1 Y 1 C SER 3 ? C SER 3 15 1 Y 1 C THR 4 ? C THR 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 PRO N N N N 264 PRO CA C N S 265 PRO C C N N 266 PRO O O N N 267 PRO CB C N N 268 PRO CG C N N 269 PRO CD C N N 270 PRO OXT O N N 271 PRO H H N N 272 PRO HA H N N 273 PRO HB2 H N N 274 PRO HB3 H N N 275 PRO HG2 H N N 276 PRO HG3 H N N 277 PRO HD2 H N N 278 PRO HD3 H N N 279 PRO HXT H N N 280 SER N N N N 281 SER CA C N S 282 SER C C N N 283 SER O O N N 284 SER CB C N N 285 SER OG O N N 286 SER OXT O N N 287 SER H H N N 288 SER H2 H N N 289 SER HA H N N 290 SER HB2 H N N 291 SER HB3 H N N 292 SER HG H N N 293 SER HXT H N N 294 SO4 S S N N 295 SO4 O1 O N N 296 SO4 O2 O N N 297 SO4 O3 O N N 298 SO4 O4 O N N 299 THR N N N N 300 THR CA C N S 301 THR C C N N 302 THR O O N N 303 THR CB C N R 304 THR OG1 O N N 305 THR CG2 C N N 306 THR OXT O N N 307 THR H H N N 308 THR H2 H N N 309 THR HA H N N 310 THR HB H N N 311 THR HG1 H N N 312 THR HG21 H N N 313 THR HG22 H N N 314 THR HG23 H N N 315 THR HXT H N N 316 TRP N N N N 317 TRP CA C N S 318 TRP C C N N 319 TRP O O N N 320 TRP CB C N N 321 TRP CG C Y N 322 TRP CD1 C Y N 323 TRP CD2 C Y N 324 TRP NE1 N Y N 325 TRP CE2 C Y N 326 TRP CE3 C Y N 327 TRP CZ2 C Y N 328 TRP CZ3 C Y N 329 TRP CH2 C Y N 330 TRP OXT O N N 331 TRP H H N N 332 TRP H2 H N N 333 TRP HA H N N 334 TRP HB2 H N N 335 TRP HB3 H N N 336 TRP HD1 H N N 337 TRP HE1 H N N 338 TRP HE3 H N N 339 TRP HZ2 H N N 340 TRP HZ3 H N N 341 TRP HH2 H N N 342 TRP HXT H N N 343 TYR N N N N 344 TYR CA C N S 345 TYR C C N N 346 TYR O O N N 347 TYR CB C N N 348 TYR CG C Y N 349 TYR CD1 C Y N 350 TYR CD2 C Y N 351 TYR CE1 C Y N 352 TYR CE2 C Y N 353 TYR CZ C Y N 354 TYR OH O N N 355 TYR OXT O N N 356 TYR H H N N 357 TYR H2 H N N 358 TYR HA H N N 359 TYR HB2 H N N 360 TYR HB3 H N N 361 TYR HD1 H N N 362 TYR HD2 H N N 363 TYR HE1 H N N 364 TYR HE2 H N N 365 TYR HH H N N 366 TYR HXT H N N 367 VAL N N N N 368 VAL CA C N S 369 VAL C C N N 370 VAL O O N N 371 VAL CB C N N 372 VAL CG1 C N N 373 VAL CG2 C N N 374 VAL OXT O N N 375 VAL H H N N 376 VAL H2 H N N 377 VAL HA H N N 378 VAL HB H N N 379 VAL HG11 H N N 380 VAL HG12 H N N 381 VAL HG13 H N N 382 VAL HG21 H N N 383 VAL HG22 H N N 384 VAL HG23 H N N 385 VAL HXT H N N 386 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 PRO N CA sing N N 250 PRO N CD sing N N 251 PRO N H sing N N 252 PRO CA C sing N N 253 PRO CA CB sing N N 254 PRO CA HA sing N N 255 PRO C O doub N N 256 PRO C OXT sing N N 257 PRO CB CG sing N N 258 PRO CB HB2 sing N N 259 PRO CB HB3 sing N N 260 PRO CG CD sing N N 261 PRO CG HG2 sing N N 262 PRO CG HG3 sing N N 263 PRO CD HD2 sing N N 264 PRO CD HD3 sing N N 265 PRO OXT HXT sing N N 266 SER N CA sing N N 267 SER N H sing N N 268 SER N H2 sing N N 269 SER CA C sing N N 270 SER CA CB sing N N 271 SER CA HA sing N N 272 SER C O doub N N 273 SER C OXT sing N N 274 SER CB OG sing N N 275 SER CB HB2 sing N N 276 SER CB HB3 sing N N 277 SER OG HG sing N N 278 SER OXT HXT sing N N 279 SO4 S O1 doub N N 280 SO4 S O2 doub N N 281 SO4 S O3 sing N N 282 SO4 S O4 sing N N 283 THR N CA sing N N 284 THR N H sing N N 285 THR N H2 sing N N 286 THR CA C sing N N 287 THR CA CB sing N N 288 THR CA HA sing N N 289 THR C O doub N N 290 THR C OXT sing N N 291 THR CB OG1 sing N N 292 THR CB CG2 sing N N 293 THR CB HB sing N N 294 THR OG1 HG1 sing N N 295 THR CG2 HG21 sing N N 296 THR CG2 HG22 sing N N 297 THR CG2 HG23 sing N N 298 THR OXT HXT sing N N 299 TRP N CA sing N N 300 TRP N H sing N N 301 TRP N H2 sing N N 302 TRP CA C sing N N 303 TRP CA CB sing N N 304 TRP CA HA sing N N 305 TRP C O doub N N 306 TRP C OXT sing N N 307 TRP CB CG sing N N 308 TRP CB HB2 sing N N 309 TRP CB HB3 sing N N 310 TRP CG CD1 doub Y N 311 TRP CG CD2 sing Y N 312 TRP CD1 NE1 sing Y N 313 TRP CD1 HD1 sing N N 314 TRP CD2 CE2 doub Y N 315 TRP CD2 CE3 sing Y N 316 TRP NE1 CE2 sing Y N 317 TRP NE1 HE1 sing N N 318 TRP CE2 CZ2 sing Y N 319 TRP CE3 CZ3 doub Y N 320 TRP CE3 HE3 sing N N 321 TRP CZ2 CH2 doub Y N 322 TRP CZ2 HZ2 sing N N 323 TRP CZ3 CH2 sing Y N 324 TRP CZ3 HZ3 sing N N 325 TRP CH2 HH2 sing N N 326 TRP OXT HXT sing N N 327 TYR N CA sing N N 328 TYR N H sing N N 329 TYR N H2 sing N N 330 TYR CA C sing N N 331 TYR CA CB sing N N 332 TYR CA HA sing N N 333 TYR C O doub N N 334 TYR C OXT sing N N 335 TYR CB CG sing N N 336 TYR CB HB2 sing N N 337 TYR CB HB3 sing N N 338 TYR CG CD1 doub Y N 339 TYR CG CD2 sing Y N 340 TYR CD1 CE1 sing Y N 341 TYR CD1 HD1 sing N N 342 TYR CD2 CE2 doub Y N 343 TYR CD2 HD2 sing N N 344 TYR CE1 CZ doub Y N 345 TYR CE1 HE1 sing N N 346 TYR CE2 CZ sing Y N 347 TYR CE2 HE2 sing N N 348 TYR CZ OH sing N N 349 TYR OH HH sing N N 350 TYR OXT HXT sing N N 351 VAL N CA sing N N 352 VAL N H sing N N 353 VAL N H2 sing N N 354 VAL CA C sing N N 355 VAL CA CB sing N N 356 VAL CA HA sing N N 357 VAL C O doub N N 358 VAL C OXT sing N N 359 VAL CB CG1 sing N N 360 VAL CB CG2 sing N N 361 VAL CB HB sing N N 362 VAL CG1 HG11 sing N N 363 VAL CG1 HG12 sing N N 364 VAL CG1 HG13 sing N N 365 VAL CG2 HG21 sing N N 366 VAL CG2 HG22 sing N N 367 VAL CG2 HG23 sing N N 368 VAL OXT HXT sing N N 369 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 'SULFATE ION' SO4 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2ZFH _pdbx_initial_refinement_model.details 'PDB ENTRY 2ZFH' #