data_2ZPL # _entry.id 2ZPL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2ZPL pdb_00002zpl 10.2210/pdb2zpl/pdb RCSB RCSB028265 ? ? WWPDB D_1000028265 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2ZPL _pdbx_database_status.recvd_initial_deposition_date 2008-07-17 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Inaba, K.' 1 'Suzuki, M.' 2 # _citation.id primary _citation.title 'Crystal structure analysis of PDZ-domain A' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Inaba, K.' 1 ? primary 'Suzuki, M.' 2 ? primary 'Maegawa, K.' 3 ? primary 'Akiyama, Y.' 4 ? # _cell.entry_id 2ZPL _cell.length_a 54.756 _cell.length_b 54.756 _cell.length_c 75.644 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2ZPL _symmetry.space_group_name_H-M 'P 31' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Regulator of sigma E protease' 10521.553 3 3.4.24.- L169M 'PDZ-domain A' ? 2 non-polymer syn 'NICKEL (II) ION' 58.693 3 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 water nat water 18.015 122 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GSVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQ(MSE)VDKIGDESTTITVAPFGSDQRRDVKLDLRHW AFEPDKEDPVSSLGIRPRGPQ ; _entity_poly.pdbx_seq_one_letter_code_can ;GSVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQMVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEP DKEDPVSSLGIRPRGPQ ; _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 VAL n 1 4 ARG n 1 5 PRO n 1 6 VAL n 1 7 VAL n 1 8 GLY n 1 9 GLU n 1 10 ILE n 1 11 ALA n 1 12 ALA n 1 13 ASN n 1 14 SER n 1 15 ILE n 1 16 ALA n 1 17 ALA n 1 18 GLU n 1 19 ALA n 1 20 GLN n 1 21 ILE n 1 22 ALA n 1 23 PRO n 1 24 GLY n 1 25 THR n 1 26 GLU n 1 27 LEU n 1 28 LYS n 1 29 ALA n 1 30 VAL n 1 31 ASP n 1 32 GLY n 1 33 ILE n 1 34 GLU n 1 35 THR n 1 36 PRO n 1 37 ASP n 1 38 TRP n 1 39 ASP n 1 40 ALA n 1 41 VAL n 1 42 ARG n 1 43 LEU n 1 44 GLN n 1 45 MSE n 1 46 VAL n 1 47 ASP n 1 48 LYS n 1 49 ILE n 1 50 GLY n 1 51 ASP n 1 52 GLU n 1 53 SER n 1 54 THR n 1 55 THR n 1 56 ILE n 1 57 THR n 1 58 VAL n 1 59 ALA n 1 60 PRO n 1 61 PHE n 1 62 GLY n 1 63 SER n 1 64 ASP n 1 65 GLN n 1 66 ARG n 1 67 ARG n 1 68 ASP n 1 69 VAL n 1 70 LYS n 1 71 LEU n 1 72 ASP n 1 73 LEU n 1 74 ARG n 1 75 HIS n 1 76 TRP n 1 77 ALA n 1 78 PHE n 1 79 GLU n 1 80 PRO n 1 81 ASP n 1 82 LYS n 1 83 GLU n 1 84 ASP n 1 85 PRO n 1 86 VAL n 1 87 SER n 1 88 SER n 1 89 LEU n 1 90 GLY n 1 91 ILE n 1 92 ARG n 1 93 PRO n 1 94 ARG n 1 95 GLY n 1 96 PRO n 1 97 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-4T-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RSEP_ECOLI _struct_ref.pdbx_db_accession P0AEH1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VRPVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDK EDPVSSLGIRPRGPQ ; _struct_ref.pdbx_align_begin 127 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2ZPL A 3 ? 97 ? P0AEH1 127 ? 221 ? 127 221 2 1 2ZPL B 3 ? 97 ? P0AEH1 127 ? 221 ? 127 221 3 1 2ZPL C 3 ? 97 ? P0AEH1 127 ? 221 ? 127 221 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2ZPL GLY A 1 ? UNP P0AEH1 ? ? 'expression tag' 125 1 1 2ZPL SER A 2 ? UNP P0AEH1 ? ? 'expression tag' 126 2 1 2ZPL MSE A 45 ? UNP P0AEH1 LEU 169 'engineered mutation' 169 3 2 2ZPL GLY B 1 ? UNP P0AEH1 ? ? 'expression tag' 125 4 2 2ZPL SER B 2 ? UNP P0AEH1 ? ? 'expression tag' 126 5 2 2ZPL MSE B 45 ? UNP P0AEH1 LEU 169 'engineered mutation' 169 6 3 2ZPL GLY C 1 ? UNP P0AEH1 ? ? 'expression tag' 125 7 3 2ZPL SER C 2 ? UNP P0AEH1 ? ? 'expression tag' 126 8 3 2ZPL MSE C 45 ? UNP P0AEH1 LEU 169 'engineered mutation' 169 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2ZPL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.07 _exptl_crystal.density_percent_sol 40.70 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '17% PEG2000mme, 85mM Tris-HCl, 8.5mM NiCl2, VAPOR DIFFUSION, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9791 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-5A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-5A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9791 # _reflns.entry_id 2ZPL _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.70 _reflns.d_resolution_low 18.55 _reflns.number_all ? _reflns.number_obs 27607 _reflns.percent_possible_obs 99.0 _reflns.pdbx_Rmerge_I_obs 0.037 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 35.1 _reflns.B_iso_Wilson_estimate 26.2 _reflns.pdbx_redundancy 10.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.70 _reflns_shell.d_res_low 1.79 _reflns_shell.percent_possible_all 93.9 _reflns_shell.Rmerge_I_obs 0.376 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.2 _reflns_shell.pdbx_redundancy 7.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3842 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2ZPL _refine.ls_number_reflns_obs 26202 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 18.55 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 99.02 _refine.ls_R_factor_obs 0.15075 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.14953 _refine.ls_R_factor_R_free 0.17550 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1401 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.973 _refine.correlation_coeff_Fo_to_Fc_free 0.969 _refine.B_iso_mean 27.943 _refine.aniso_B[1][1] 5.31 _refine.aniso_B[2][2] 5.31 _refine.aniso_B[3][3] -10.63 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;The structure factor data is twinned data. The twinning operator and fraction are (h, k, l, 0.642), (-h, h+k, -l, 0.019), (-h-k, k, -l, 0.319) and (-h, -k, l, 0.020). ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.020 _refine.pdbx_overall_ESU_R_Free 0.019 _refine.overall_SU_ML 0.066 _refine.overall_SU_B 2.199 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2100 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 122 _refine_hist.number_atoms_total 2237 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 18.55 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.019 0.022 ? 2156 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.869 1.973 ? 2934 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.755 5.000 ? 275 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.390 24.167 ? 96 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.926 15.000 ? 356 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.845 15.000 ? 21 'X-RAY DIFFRACTION' ? r_chiral_restr 0.114 0.200 ? 337 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.022 ? 1638 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.264 1.500 ? 1379 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.143 2.000 ? 2240 'X-RAY DIFFRACTION' ? r_scbond_it 3.307 3.000 ? 777 'X-RAY DIFFRACTION' ? r_scangle_it 5.310 4.500 ? 692 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.700 _refine_ls_shell.d_res_low 1.744 _refine_ls_shell.number_reflns_R_work 1706 _refine_ls_shell.R_factor_R_work 0.198 _refine_ls_shell.percent_reflns_obs 87.91 _refine_ls_shell.R_factor_R_free 0.250 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 97 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2ZPL _struct.title 'Crystal structure analysis of PDZ domain A' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2ZPL _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;metalloproteinase, membrane protein, PDZ-domain, Hydrolase, Inner membrane, Membrane, Metal-binding, Metalloprotease, Protease, Transmembrane ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 2 ? H N N 3 ? I N N 4 ? J N N 4 ? K N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 14 ? ALA A 19 ? SER A 138 ALA A 143 1 ? 6 HELX_P HELX_P2 2 ASP A 37 ? ASP A 47 ? ASP A 161 ASP A 171 1 ? 11 HELX_P HELX_P3 3 ASP A 84 ? LEU A 89 ? ASP A 208 LEU A 213 1 ? 6 HELX_P HELX_P4 4 SER B 14 ? ALA B 19 ? SER B 138 ALA B 143 1 ? 6 HELX_P HELX_P5 5 ASP B 37 ? ASP B 47 ? ASP B 161 ASP B 171 1 ? 11 HELX_P HELX_P6 6 ASP B 84 ? LEU B 89 ? ASP B 208 LEU B 213 1 ? 6 HELX_P HELX_P7 7 SER C 14 ? ALA C 19 ? SER C 138 ALA C 143 1 ? 6 HELX_P HELX_P8 8 ASP C 37 ? ASP C 47 ? ASP C 161 ASP C 171 1 ? 11 HELX_P HELX_P9 9 ASP C 84 ? LEU C 89 ? ASP C 208 LEU C 213 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLN 44 C ? ? ? 1_555 A MSE 45 N ? ? A GLN 168 A MSE 169 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale2 covale both ? A MSE 45 C ? ? ? 1_555 A VAL 46 N ? ? A MSE 169 A VAL 170 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? B GLN 44 C ? ? ? 1_555 B MSE 45 N ? ? B GLN 168 B MSE 169 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale4 covale both ? B MSE 45 C ? ? ? 1_555 B VAL 46 N ? ? B MSE 169 B VAL 170 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale5 covale both ? C GLN 44 C ? ? ? 1_555 C MSE 45 N ? ? C GLN 168 C MSE 169 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale6 covale both ? C MSE 45 C ? ? ? 1_555 C VAL 46 N ? ? C MSE 169 C VAL 170 1_555 ? ? ? ? ? ? ? 1.337 ? ? metalc1 metalc ? ? D NI . NI ? ? ? 1_555 A ASP 51 OD1 ? ? A NI 1 A ASP 175 1_555 ? ? ? ? ? ? ? 2.091 ? ? metalc2 metalc ? ? D NI . NI ? ? ? 1_555 I HOH . O ? ? A NI 1 A HOH 222 1_555 ? ? ? ? ? ? ? 2.099 ? ? metalc3 metalc ? ? D NI . NI ? ? ? 1_555 I HOH . O ? ? A NI 1 A HOH 224 1_555 ? ? ? ? ? ? ? 2.068 ? ? metalc4 metalc ? ? D NI . NI ? ? ? 1_555 I HOH . O ? ? A NI 1 A HOH 260 1_555 ? ? ? ? ? ? ? 2.152 ? ? metalc5 metalc ? ? A HIS 75 NE2 ? ? ? 1_555 E NI . NI ? ? A HIS 199 B NI 2 1_555 ? ? ? ? ? ? ? 2.080 ? ? metalc6 metalc ? ? E NI . NI ? ? ? 1_555 J HOH . O ? ? B NI 2 B HOH 4 1_555 ? ? ? ? ? ? ? 1.742 ? ? metalc7 metalc ? ? E NI . NI ? ? ? 1_555 J HOH . O ? ? B NI 2 B HOH 5 1_555 ? ? ? ? ? ? ? 2.110 ? ? metalc8 metalc ? ? E NI . NI ? ? ? 1_555 J HOH . O ? ? B NI 2 B HOH 6 1_555 ? ? ? ? ? ? ? 2.074 ? ? metalc9 metalc ? ? E NI . NI ? ? ? 1_555 B GLY 1 N ? ? B NI 2 B GLY 125 1_555 ? ? ? ? ? ? ? 1.775 ? ? metalc10 metalc ? ? E NI . NI ? ? ? 1_555 B GLY 1 O ? ? B NI 2 B GLY 125 1_555 ? ? ? ? ? ? ? 2.051 ? ? metalc11 metalc ? ? G NI . NI ? ? ? 1_555 C HIS 75 NE2 ? ? C NI 3 C HIS 199 1_555 ? ? ? ? ? ? ? 2.160 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 4 ? C ? 2 ? D ? 4 ? E ? 2 ? F ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 7 ? ILE A 10 ? VAL A 131 ILE A 134 A 2 ILE A 91 ? PRO A 93 ? ILE A 215 PRO A 217 B 1 ILE A 33 ? GLU A 34 ? ILE A 157 GLU A 158 B 2 GLU A 26 ? VAL A 30 ? GLU A 150 VAL A 154 B 3 SER A 53 ? ALA A 59 ? SER A 177 ALA A 183 B 4 ARG A 67 ? ASP A 72 ? ARG A 191 ASP A 196 C 1 VAL B 7 ? ILE B 10 ? VAL B 131 ILE B 134 C 2 ILE B 91 ? PRO B 93 ? ILE B 215 PRO B 217 D 1 ILE B 33 ? GLU B 34 ? ILE B 157 GLU B 158 D 2 GLU B 26 ? VAL B 30 ? GLU B 150 VAL B 154 D 3 SER B 53 ? ALA B 59 ? SER B 177 ALA B 183 D 4 ARG B 67 ? ASP B 72 ? ARG B 191 ASP B 196 E 1 VAL C 7 ? ILE C 10 ? VAL C 131 ILE C 134 E 2 ILE C 91 ? PRO C 93 ? ILE C 215 PRO C 217 F 1 ILE C 33 ? GLU C 34 ? ILE C 157 GLU C 158 F 2 GLU C 26 ? VAL C 30 ? GLU C 150 VAL C 154 F 3 SER C 53 ? ALA C 59 ? SER C 177 ALA C 183 F 4 ARG C 67 ? ASP C 72 ? ARG C 191 ASP C 196 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 9 ? N GLU A 133 O ARG A 92 ? O ARG A 216 B 1 2 O ILE A 33 ? O ILE A 157 N VAL A 30 ? N VAL A 154 B 2 3 N GLU A 26 ? N GLU A 150 O ALA A 59 ? O ALA A 183 B 3 4 N THR A 54 ? N THR A 178 O LEU A 71 ? O LEU A 195 C 1 2 N GLY B 8 ? N GLY B 132 O ARG B 92 ? O ARG B 216 D 1 2 O ILE B 33 ? O ILE B 157 N VAL B 30 ? N VAL B 154 D 2 3 N GLU B 26 ? N GLU B 150 O ALA B 59 ? O ALA B 183 D 3 4 N THR B 54 ? N THR B 178 O LEU B 71 ? O LEU B 195 E 1 2 N GLY C 8 ? N GLY C 132 O ARG C 92 ? O ARG C 216 F 1 2 O ILE C 33 ? O ILE C 157 N VAL C 30 ? N VAL C 154 F 2 3 N GLU C 26 ? N GLU C 150 O ALA C 59 ? O ALA C 183 F 3 4 N THR C 54 ? N THR C 178 O LEU C 71 ? O LEU C 195 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NI 1 ? 5 'BINDING SITE FOR RESIDUE NI A 1' AC2 Software B NI 2 ? 5 'BINDING SITE FOR RESIDUE NI B 2' AC3 Software C GOL 1 ? 8 'BINDING SITE FOR RESIDUE GOL C 1' AC4 Software B GOL 222 ? 5 'BINDING SITE FOR RESIDUE GOL B 222' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP A 51 ? ASP A 175 . ? 1_555 ? 2 AC1 5 HOH I . ? HOH A 222 . ? 1_555 ? 3 AC1 5 HOH I . ? HOH A 224 . ? 1_555 ? 4 AC1 5 HOH I . ? HOH A 260 . ? 1_555 ? 5 AC1 5 GLY C 1 ? GLY C 125 . ? 1_665 ? 6 AC2 5 HIS A 75 ? HIS A 199 . ? 1_555 ? 7 AC2 5 HOH J . ? HOH B 4 . ? 1_555 ? 8 AC2 5 HOH J . ? HOH B 5 . ? 1_555 ? 9 AC2 5 HOH J . ? HOH B 6 . ? 1_555 ? 10 AC2 5 GLY B 1 ? GLY B 125 . ? 1_555 ? 11 AC3 8 HOH J . ? HOH B 25 . ? 1_555 ? 12 AC3 8 ARG B 4 ? ARG B 128 . ? 1_555 ? 13 AC3 8 HOH K . ? HOH C 96 . ? 1_555 ? 14 AC3 8 ILE C 49 ? ILE C 173 . ? 1_555 ? 15 AC3 8 GLY C 50 ? GLY C 174 . ? 1_555 ? 16 AC3 8 ASP C 51 ? ASP C 175 . ? 1_555 ? 17 AC3 8 TRP C 76 ? TRP C 200 . ? 1_555 ? 18 AC3 8 PHE C 78 ? PHE C 202 . ? 1_555 ? 19 AC4 5 HOH J . ? HOH B 27 . ? 1_555 ? 20 AC4 5 HOH J . ? HOH B 84 . ? 1_555 ? 21 AC4 5 ASP B 37 ? ASP B 161 . ? 1_555 ? 22 AC4 5 TRP B 38 ? TRP B 162 . ? 1_555 ? 23 AC4 5 ASP B 39 ? ASP B 163 . ? 1_555 ? # _database_PDB_matrix.entry_id 2ZPL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2ZPL _atom_sites.fract_transf_matrix[1][1] 0.018263 _atom_sites.fract_transf_matrix[1][2] 0.010544 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021088 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013220 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NI O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 125 ? ? ? A . n A 1 2 SER 2 126 ? ? ? A . n A 1 3 VAL 3 127 127 VAL VAL A . n A 1 4 ARG 4 128 128 ARG ARG A . n A 1 5 PRO 5 129 129 PRO PRO A . n A 1 6 VAL 6 130 130 VAL VAL A . n A 1 7 VAL 7 131 131 VAL VAL A . n A 1 8 GLY 8 132 132 GLY GLY A . n A 1 9 GLU 9 133 133 GLU GLU A . n A 1 10 ILE 10 134 134 ILE ILE A . n A 1 11 ALA 11 135 135 ALA ALA A . n A 1 12 ALA 12 136 136 ALA ALA A . n A 1 13 ASN 13 137 137 ASN ASN A . n A 1 14 SER 14 138 138 SER SER A . n A 1 15 ILE 15 139 139 ILE ILE A . n A 1 16 ALA 16 140 140 ALA ALA A . n A 1 17 ALA 17 141 141 ALA ALA A . n A 1 18 GLU 18 142 142 GLU GLU A . n A 1 19 ALA 19 143 143 ALA ALA A . n A 1 20 GLN 20 144 144 GLN GLN A . n A 1 21 ILE 21 145 145 ILE ILE A . n A 1 22 ALA 22 146 146 ALA ALA A . n A 1 23 PRO 23 147 147 PRO PRO A . n A 1 24 GLY 24 148 148 GLY GLY A . n A 1 25 THR 25 149 149 THR THR A . n A 1 26 GLU 26 150 150 GLU GLU A . n A 1 27 LEU 27 151 151 LEU LEU A . n A 1 28 LYS 28 152 152 LYS LYS A . n A 1 29 ALA 29 153 153 ALA ALA A . n A 1 30 VAL 30 154 154 VAL VAL A . n A 1 31 ASP 31 155 155 ASP ASP A . n A 1 32 GLY 32 156 156 GLY GLY A . n A 1 33 ILE 33 157 157 ILE ILE A . n A 1 34 GLU 34 158 158 GLU GLU A . n A 1 35 THR 35 159 159 THR THR A . n A 1 36 PRO 36 160 160 PRO PRO A . n A 1 37 ASP 37 161 161 ASP ASP A . n A 1 38 TRP 38 162 162 TRP TRP A . n A 1 39 ASP 39 163 163 ASP ASP A . n A 1 40 ALA 40 164 164 ALA ALA A . n A 1 41 VAL 41 165 165 VAL VAL A . n A 1 42 ARG 42 166 166 ARG ARG A . n A 1 43 LEU 43 167 167 LEU LEU A . n A 1 44 GLN 44 168 168 GLN GLN A . n A 1 45 MSE 45 169 169 MSE MSE A . n A 1 46 VAL 46 170 170 VAL VAL A . n A 1 47 ASP 47 171 171 ASP ASP A . n A 1 48 LYS 48 172 172 LYS LYS A . n A 1 49 ILE 49 173 173 ILE ILE A . n A 1 50 GLY 50 174 174 GLY GLY A . n A 1 51 ASP 51 175 175 ASP ASP A . n A 1 52 GLU 52 176 176 GLU GLU A . n A 1 53 SER 53 177 177 SER SER A . n A 1 54 THR 54 178 178 THR THR A . n A 1 55 THR 55 179 179 THR THR A . n A 1 56 ILE 56 180 180 ILE ILE A . n A 1 57 THR 57 181 181 THR THR A . n A 1 58 VAL 58 182 182 VAL VAL A . n A 1 59 ALA 59 183 183 ALA ALA A . n A 1 60 PRO 60 184 184 PRO PRO A . n A 1 61 PHE 61 185 185 PHE PHE A . n A 1 62 GLY 62 186 186 GLY GLY A . n A 1 63 SER 63 187 187 SER SER A . n A 1 64 ASP 64 188 188 ASP ASP A . n A 1 65 GLN 65 189 189 GLN GLN A . n A 1 66 ARG 66 190 190 ARG ARG A . n A 1 67 ARG 67 191 191 ARG ARG A . n A 1 68 ASP 68 192 192 ASP ASP A . n A 1 69 VAL 69 193 193 VAL VAL A . n A 1 70 LYS 70 194 194 LYS LYS A . n A 1 71 LEU 71 195 195 LEU LEU A . n A 1 72 ASP 72 196 196 ASP ASP A . n A 1 73 LEU 73 197 197 LEU LEU A . n A 1 74 ARG 74 198 198 ARG ARG A . n A 1 75 HIS 75 199 199 HIS HIS A . n A 1 76 TRP 76 200 200 TRP TRP A . n A 1 77 ALA 77 201 201 ALA ALA A . n A 1 78 PHE 78 202 202 PHE PHE A . n A 1 79 GLU 79 203 203 GLU GLU A . n A 1 80 PRO 80 204 204 PRO PRO A . n A 1 81 ASP 81 205 205 ASP ASP A . n A 1 82 LYS 82 206 206 LYS LYS A . n A 1 83 GLU 83 207 207 GLU GLU A . n A 1 84 ASP 84 208 208 ASP ASP A . n A 1 85 PRO 85 209 209 PRO PRO A . n A 1 86 VAL 86 210 210 VAL VAL A . n A 1 87 SER 87 211 211 SER SER A . n A 1 88 SER 88 212 212 SER SER A . n A 1 89 LEU 89 213 213 LEU LEU A . n A 1 90 GLY 90 214 214 GLY GLY A . n A 1 91 ILE 91 215 215 ILE ILE A . n A 1 92 ARG 92 216 216 ARG ARG A . n A 1 93 PRO 93 217 217 PRO PRO A . n A 1 94 ARG 94 218 218 ARG ARG A . n A 1 95 GLY 95 219 ? ? ? A . n A 1 96 PRO 96 220 ? ? ? A . n A 1 97 GLN 97 221 ? ? ? A . n B 1 1 GLY 1 125 125 GLY GLY B . n B 1 2 SER 2 126 126 SER SER B . n B 1 3 VAL 3 127 127 VAL VAL B . n B 1 4 ARG 4 128 128 ARG ARG B . n B 1 5 PRO 5 129 129 PRO PRO B . n B 1 6 VAL 6 130 130 VAL VAL B . n B 1 7 VAL 7 131 131 VAL VAL B . n B 1 8 GLY 8 132 132 GLY GLY B . n B 1 9 GLU 9 133 133 GLU GLU B . n B 1 10 ILE 10 134 134 ILE ILE B . n B 1 11 ALA 11 135 135 ALA ALA B . n B 1 12 ALA 12 136 136 ALA ALA B . n B 1 13 ASN 13 137 137 ASN ASN B . n B 1 14 SER 14 138 138 SER SER B . n B 1 15 ILE 15 139 139 ILE ILE B . n B 1 16 ALA 16 140 140 ALA ALA B . n B 1 17 ALA 17 141 141 ALA ALA B . n B 1 18 GLU 18 142 142 GLU GLU B . n B 1 19 ALA 19 143 143 ALA ALA B . n B 1 20 GLN 20 144 144 GLN GLN B . n B 1 21 ILE 21 145 145 ILE ILE B . n B 1 22 ALA 22 146 146 ALA ALA B . n B 1 23 PRO 23 147 147 PRO PRO B . n B 1 24 GLY 24 148 148 GLY GLY B . n B 1 25 THR 25 149 149 THR THR B . n B 1 26 GLU 26 150 150 GLU GLU B . n B 1 27 LEU 27 151 151 LEU LEU B . n B 1 28 LYS 28 152 152 LYS LYS B . n B 1 29 ALA 29 153 153 ALA ALA B . n B 1 30 VAL 30 154 154 VAL VAL B . n B 1 31 ASP 31 155 155 ASP ASP B . n B 1 32 GLY 32 156 156 GLY GLY B . n B 1 33 ILE 33 157 157 ILE ILE B . n B 1 34 GLU 34 158 158 GLU GLU B . n B 1 35 THR 35 159 159 THR THR B . n B 1 36 PRO 36 160 160 PRO PRO B . n B 1 37 ASP 37 161 161 ASP ASP B . n B 1 38 TRP 38 162 162 TRP TRP B . n B 1 39 ASP 39 163 163 ASP ASP B . n B 1 40 ALA 40 164 164 ALA ALA B . n B 1 41 VAL 41 165 165 VAL VAL B . n B 1 42 ARG 42 166 166 ARG ARG B . n B 1 43 LEU 43 167 167 LEU LEU B . n B 1 44 GLN 44 168 168 GLN GLN B . n B 1 45 MSE 45 169 169 MSE MSE B . n B 1 46 VAL 46 170 170 VAL VAL B . n B 1 47 ASP 47 171 171 ASP ASP B . n B 1 48 LYS 48 172 172 LYS LYS B . n B 1 49 ILE 49 173 173 ILE ILE B . n B 1 50 GLY 50 174 174 GLY GLY B . n B 1 51 ASP 51 175 175 ASP ASP B . n B 1 52 GLU 52 176 176 GLU GLU B . n B 1 53 SER 53 177 177 SER SER B . n B 1 54 THR 54 178 178 THR THR B . n B 1 55 THR 55 179 179 THR THR B . n B 1 56 ILE 56 180 180 ILE ILE B . n B 1 57 THR 57 181 181 THR THR B . n B 1 58 VAL 58 182 182 VAL VAL B . n B 1 59 ALA 59 183 183 ALA ALA B . n B 1 60 PRO 60 184 184 PRO PRO B . n B 1 61 PHE 61 185 185 PHE PHE B . n B 1 62 GLY 62 186 186 GLY GLY B . n B 1 63 SER 63 187 187 SER SER B . n B 1 64 ASP 64 188 188 ASP ASP B . n B 1 65 GLN 65 189 189 GLN GLN B . n B 1 66 ARG 66 190 190 ARG ARG B . n B 1 67 ARG 67 191 191 ARG ARG B . n B 1 68 ASP 68 192 192 ASP ASP B . n B 1 69 VAL 69 193 193 VAL VAL B . n B 1 70 LYS 70 194 194 LYS LYS B . n B 1 71 LEU 71 195 195 LEU LEU B . n B 1 72 ASP 72 196 196 ASP ASP B . n B 1 73 LEU 73 197 197 LEU LEU B . n B 1 74 ARG 74 198 198 ARG ARG B . n B 1 75 HIS 75 199 199 HIS HIS B . n B 1 76 TRP 76 200 200 TRP TRP B . n B 1 77 ALA 77 201 201 ALA ALA B . n B 1 78 PHE 78 202 202 PHE PHE B . n B 1 79 GLU 79 203 203 GLU GLU B . n B 1 80 PRO 80 204 204 PRO PRO B . n B 1 81 ASP 81 205 205 ASP ASP B . n B 1 82 LYS 82 206 206 LYS LYS B . n B 1 83 GLU 83 207 207 GLU GLU B . n B 1 84 ASP 84 208 208 ASP ASP B . n B 1 85 PRO 85 209 209 PRO PRO B . n B 1 86 VAL 86 210 210 VAL VAL B . n B 1 87 SER 87 211 211 SER SER B . n B 1 88 SER 88 212 212 SER SER B . n B 1 89 LEU 89 213 213 LEU LEU B . n B 1 90 GLY 90 214 214 GLY GLY B . n B 1 91 ILE 91 215 215 ILE ILE B . n B 1 92 ARG 92 216 216 ARG ARG B . n B 1 93 PRO 93 217 217 PRO PRO B . n B 1 94 ARG 94 218 218 ARG ARG B . n B 1 95 GLY 95 219 ? ? ? B . n B 1 96 PRO 96 220 ? ? ? B . n B 1 97 GLN 97 221 ? ? ? B . n C 1 1 GLY 1 125 125 GLY GLY C . n C 1 2 SER 2 126 126 SER SER C . n C 1 3 VAL 3 127 127 VAL VAL C . n C 1 4 ARG 4 128 128 ARG ARG C . n C 1 5 PRO 5 129 129 PRO PRO C . n C 1 6 VAL 6 130 130 VAL VAL C . n C 1 7 VAL 7 131 131 VAL VAL C . n C 1 8 GLY 8 132 132 GLY GLY C . n C 1 9 GLU 9 133 133 GLU GLU C . n C 1 10 ILE 10 134 134 ILE ILE C . n C 1 11 ALA 11 135 135 ALA ALA C . n C 1 12 ALA 12 136 136 ALA ALA C . n C 1 13 ASN 13 137 137 ASN ASN C . n C 1 14 SER 14 138 138 SER SER C . n C 1 15 ILE 15 139 139 ILE ILE C . n C 1 16 ALA 16 140 140 ALA ALA C . n C 1 17 ALA 17 141 141 ALA ALA C . n C 1 18 GLU 18 142 142 GLU GLU C . n C 1 19 ALA 19 143 143 ALA ALA C . n C 1 20 GLN 20 144 144 GLN GLN C . n C 1 21 ILE 21 145 145 ILE ILE C . n C 1 22 ALA 22 146 146 ALA ALA C . n C 1 23 PRO 23 147 147 PRO PRO C . n C 1 24 GLY 24 148 148 GLY GLY C . n C 1 25 THR 25 149 149 THR THR C . n C 1 26 GLU 26 150 150 GLU GLU C . n C 1 27 LEU 27 151 151 LEU LEU C . n C 1 28 LYS 28 152 152 LYS LYS C . n C 1 29 ALA 29 153 153 ALA ALA C . n C 1 30 VAL 30 154 154 VAL VAL C . n C 1 31 ASP 31 155 155 ASP ASP C . n C 1 32 GLY 32 156 156 GLY GLY C . n C 1 33 ILE 33 157 157 ILE ILE C . n C 1 34 GLU 34 158 158 GLU GLU C . n C 1 35 THR 35 159 159 THR THR C . n C 1 36 PRO 36 160 160 PRO PRO C . n C 1 37 ASP 37 161 161 ASP ASP C . n C 1 38 TRP 38 162 162 TRP TRP C . n C 1 39 ASP 39 163 163 ASP ASP C . n C 1 40 ALA 40 164 164 ALA ALA C . n C 1 41 VAL 41 165 165 VAL VAL C . n C 1 42 ARG 42 166 166 ARG ARG C . n C 1 43 LEU 43 167 167 LEU LEU C . n C 1 44 GLN 44 168 168 GLN GLN C . n C 1 45 MSE 45 169 169 MSE MSE C . n C 1 46 VAL 46 170 170 VAL VAL C . n C 1 47 ASP 47 171 171 ASP ASP C . n C 1 48 LYS 48 172 172 LYS LYS C . n C 1 49 ILE 49 173 173 ILE ILE C . n C 1 50 GLY 50 174 174 GLY GLY C . n C 1 51 ASP 51 175 175 ASP ASP C . n C 1 52 GLU 52 176 176 GLU GLU C . n C 1 53 SER 53 177 177 SER SER C . n C 1 54 THR 54 178 178 THR THR C . n C 1 55 THR 55 179 179 THR THR C . n C 1 56 ILE 56 180 180 ILE ILE C . n C 1 57 THR 57 181 181 THR THR C . n C 1 58 VAL 58 182 182 VAL VAL C . n C 1 59 ALA 59 183 183 ALA ALA C . n C 1 60 PRO 60 184 184 PRO PRO C . n C 1 61 PHE 61 185 ? ? ? C . n C 1 62 GLY 62 186 ? ? ? C . n C 1 63 SER 63 187 ? ? ? C . n C 1 64 ASP 64 188 ? ? ? C . n C 1 65 GLN 65 189 ? ? ? C . n C 1 66 ARG 66 190 190 ARG ARG C . n C 1 67 ARG 67 191 191 ARG ARG C . n C 1 68 ASP 68 192 192 ASP ASP C . n C 1 69 VAL 69 193 193 VAL VAL C . n C 1 70 LYS 70 194 194 LYS LYS C . n C 1 71 LEU 71 195 195 LEU LEU C . n C 1 72 ASP 72 196 196 ASP ASP C . n C 1 73 LEU 73 197 197 LEU LEU C . n C 1 74 ARG 74 198 198 ARG ARG C . n C 1 75 HIS 75 199 199 HIS HIS C . n C 1 76 TRP 76 200 200 TRP TRP C . n C 1 77 ALA 77 201 201 ALA ALA C . n C 1 78 PHE 78 202 202 PHE PHE C . n C 1 79 GLU 79 203 203 GLU GLU C . n C 1 80 PRO 80 204 204 PRO PRO C . n C 1 81 ASP 81 205 205 ASP ASP C . n C 1 82 LYS 82 206 206 LYS LYS C . n C 1 83 GLU 83 207 207 GLU GLU C . n C 1 84 ASP 84 208 208 ASP ASP C . n C 1 85 PRO 85 209 209 PRO PRO C . n C 1 86 VAL 86 210 210 VAL VAL C . n C 1 87 SER 87 211 211 SER SER C . n C 1 88 SER 88 212 212 SER SER C . n C 1 89 LEU 89 213 213 LEU LEU C . n C 1 90 GLY 90 214 214 GLY GLY C . n C 1 91 ILE 91 215 215 ILE ILE C . n C 1 92 ARG 92 216 216 ARG ARG C . n C 1 93 PRO 93 217 217 PRO PRO C . n C 1 94 ARG 94 218 218 ARG ARG C . n C 1 95 GLY 95 219 ? ? ? C . n C 1 96 PRO 96 220 ? ? ? C . n C 1 97 GLN 97 221 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 NI 1 1 1 NI NI A . E 2 NI 1 2 2 NI NI B . F 3 GOL 1 222 2 GOL GOL B . G 2 NI 1 3 3 NI NI C . H 3 GOL 1 1 1 GOL GOL C . I 4 HOH 1 222 1 HOH HOH A . I 4 HOH 2 223 2 HOH HOH A . I 4 HOH 3 224 3 HOH HOH A . I 4 HOH 4 225 13 HOH HOH A . I 4 HOH 5 226 17 HOH HOH A . I 4 HOH 6 227 20 HOH HOH A . I 4 HOH 7 228 22 HOH HOH A . I 4 HOH 8 229 23 HOH HOH A . I 4 HOH 9 230 26 HOH HOH A . I 4 HOH 10 231 30 HOH HOH A . I 4 HOH 11 232 32 HOH HOH A . I 4 HOH 12 233 33 HOH HOH A . I 4 HOH 13 234 38 HOH HOH A . I 4 HOH 14 235 40 HOH HOH A . I 4 HOH 15 236 42 HOH HOH A . I 4 HOH 16 237 49 HOH HOH A . I 4 HOH 17 238 51 HOH HOH A . I 4 HOH 18 239 52 HOH HOH A . I 4 HOH 19 240 53 HOH HOH A . I 4 HOH 20 241 56 HOH HOH A . I 4 HOH 21 242 58 HOH HOH A . I 4 HOH 22 243 67 HOH HOH A . I 4 HOH 23 244 69 HOH HOH A . I 4 HOH 24 245 72 HOH HOH A . I 4 HOH 25 246 73 HOH HOH A . I 4 HOH 26 247 74 HOH HOH A . I 4 HOH 27 248 76 HOH HOH A . I 4 HOH 28 249 81 HOH HOH A . I 4 HOH 29 250 87 HOH HOH A . I 4 HOH 30 251 92 HOH HOH A . I 4 HOH 31 252 94 HOH HOH A . I 4 HOH 32 253 95 HOH HOH A . I 4 HOH 33 254 97 HOH HOH A . I 4 HOH 34 255 98 HOH HOH A . I 4 HOH 35 256 99 HOH HOH A . I 4 HOH 36 257 100 HOH HOH A . I 4 HOH 37 258 102 HOH HOH A . I 4 HOH 38 259 104 HOH HOH A . I 4 HOH 39 260 105 HOH HOH A . I 4 HOH 40 261 106 HOH HOH A . I 4 HOH 41 262 107 HOH HOH A . I 4 HOH 42 263 111 HOH HOH A . I 4 HOH 43 264 114 HOH HOH A . I 4 HOH 44 265 115 HOH HOH A . I 4 HOH 45 266 119 HOH HOH A . I 4 HOH 46 267 120 HOH HOH A . J 4 HOH 1 4 4 HOH HOH B . J 4 HOH 2 5 5 HOH HOH B . J 4 HOH 3 6 6 HOH HOH B . J 4 HOH 4 7 7 HOH HOH B . J 4 HOH 5 12 12 HOH HOH B . J 4 HOH 6 21 21 HOH HOH B . J 4 HOH 7 25 25 HOH HOH B . J 4 HOH 8 27 27 HOH HOH B . J 4 HOH 9 28 28 HOH HOH B . J 4 HOH 10 29 29 HOH HOH B . J 4 HOH 11 34 34 HOH HOH B . J 4 HOH 12 36 36 HOH HOH B . J 4 HOH 13 37 37 HOH HOH B . J 4 HOH 14 39 39 HOH HOH B . J 4 HOH 15 44 44 HOH HOH B . J 4 HOH 16 45 45 HOH HOH B . J 4 HOH 17 46 46 HOH HOH B . J 4 HOH 18 47 47 HOH HOH B . J 4 HOH 19 48 48 HOH HOH B . J 4 HOH 20 50 50 HOH HOH B . J 4 HOH 21 57 57 HOH HOH B . J 4 HOH 22 59 59 HOH HOH B . J 4 HOH 23 60 60 HOH HOH B . J 4 HOH 24 61 61 HOH HOH B . J 4 HOH 25 62 62 HOH HOH B . J 4 HOH 26 63 63 HOH HOH B . J 4 HOH 27 64 64 HOH HOH B . J 4 HOH 28 65 65 HOH HOH B . J 4 HOH 29 66 66 HOH HOH B . J 4 HOH 30 68 68 HOH HOH B . J 4 HOH 31 70 70 HOH HOH B . J 4 HOH 32 71 71 HOH HOH B . J 4 HOH 33 75 75 HOH HOH B . J 4 HOH 34 77 77 HOH HOH B . J 4 HOH 35 79 79 HOH HOH B . J 4 HOH 36 80 80 HOH HOH B . J 4 HOH 37 82 82 HOH HOH B . J 4 HOH 38 83 83 HOH HOH B . J 4 HOH 39 84 84 HOH HOH B . J 4 HOH 40 88 88 HOH HOH B . J 4 HOH 41 90 90 HOH HOH B . J 4 HOH 42 91 91 HOH HOH B . J 4 HOH 43 93 93 HOH HOH B . J 4 HOH 44 101 101 HOH HOH B . J 4 HOH 45 103 103 HOH HOH B . J 4 HOH 46 109 109 HOH HOH B . J 4 HOH 47 110 110 HOH HOH B . J 4 HOH 48 112 112 HOH HOH B . J 4 HOH 49 113 113 HOH HOH B . J 4 HOH 50 117 117 HOH HOH B . J 4 HOH 51 121 121 HOH HOH B . K 4 HOH 1 8 8 HOH HOH C . K 4 HOH 2 9 9 HOH HOH C . K 4 HOH 3 10 10 HOH HOH C . K 4 HOH 4 11 11 HOH HOH C . K 4 HOH 5 14 14 HOH HOH C . K 4 HOH 6 15 15 HOH HOH C . K 4 HOH 7 16 16 HOH HOH C . K 4 HOH 8 18 18 HOH HOH C . K 4 HOH 9 19 19 HOH HOH C . K 4 HOH 10 24 24 HOH HOH C . K 4 HOH 11 31 31 HOH HOH C . K 4 HOH 12 35 35 HOH HOH C . K 4 HOH 13 41 41 HOH HOH C . K 4 HOH 14 43 43 HOH HOH C . K 4 HOH 15 54 54 HOH HOH C . K 4 HOH 16 55 55 HOH HOH C . K 4 HOH 17 78 78 HOH HOH C . K 4 HOH 18 85 85 HOH HOH C . K 4 HOH 19 86 86 HOH HOH C . K 4 HOH 20 89 89 HOH HOH C . K 4 HOH 21 96 96 HOH HOH C . K 4 HOH 22 108 108 HOH HOH C . K 4 HOH 23 116 116 HOH HOH C . K 4 HOH 24 118 118 HOH HOH C . K 4 HOH 25 122 122 HOH HOH C . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 45 A MSE 169 ? MET SELENOMETHIONINE 2 B MSE 45 B MSE 169 ? MET SELENOMETHIONINE 3 C MSE 45 C MSE 169 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 author_defined_assembly ? monomeric 1 4 software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,D,I 2 1 B,E,F,J 3 1 C,G,H,K 4 1 A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 4 'ABSA (A^2)' 3130 ? 4 MORE -29 ? 4 'SSA (A^2)' 14150 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 51 ? A ASP 175 ? 1_555 NI ? D NI . ? A NI 1 ? 1_555 O ? I HOH . ? A HOH 222 ? 1_555 99.6 ? 2 OD1 ? A ASP 51 ? A ASP 175 ? 1_555 NI ? D NI . ? A NI 1 ? 1_555 O ? I HOH . ? A HOH 224 ? 1_555 94.1 ? 3 O ? I HOH . ? A HOH 222 ? 1_555 NI ? D NI . ? A NI 1 ? 1_555 O ? I HOH . ? A HOH 224 ? 1_555 97.6 ? 4 OD1 ? A ASP 51 ? A ASP 175 ? 1_555 NI ? D NI . ? A NI 1 ? 1_555 O ? I HOH . ? A HOH 260 ? 1_555 89.3 ? 5 O ? I HOH . ? A HOH 222 ? 1_555 NI ? D NI . ? A NI 1 ? 1_555 O ? I HOH . ? A HOH 260 ? 1_555 69.3 ? 6 O ? I HOH . ? A HOH 224 ? 1_555 NI ? D NI . ? A NI 1 ? 1_555 O ? I HOH . ? A HOH 260 ? 1_555 167.0 ? 7 NE2 ? A HIS 75 ? A HIS 199 ? 1_555 NI ? E NI . ? B NI 2 ? 1_555 O ? J HOH . ? B HOH 4 ? 1_555 106.0 ? 8 NE2 ? A HIS 75 ? A HIS 199 ? 1_555 NI ? E NI . ? B NI 2 ? 1_555 O ? J HOH . ? B HOH 5 ? 1_555 165.1 ? 9 O ? J HOH . ? B HOH 4 ? 1_555 NI ? E NI . ? B NI 2 ? 1_555 O ? J HOH . ? B HOH 5 ? 1_555 88.8 ? 10 NE2 ? A HIS 75 ? A HIS 199 ? 1_555 NI ? E NI . ? B NI 2 ? 1_555 O ? J HOH . ? B HOH 6 ? 1_555 88.3 ? 11 O ? J HOH . ? B HOH 4 ? 1_555 NI ? E NI . ? B NI 2 ? 1_555 O ? J HOH . ? B HOH 6 ? 1_555 89.9 ? 12 O ? J HOH . ? B HOH 5 ? 1_555 NI ? E NI . ? B NI 2 ? 1_555 O ? J HOH . ? B HOH 6 ? 1_555 90.9 ? 13 NE2 ? A HIS 75 ? A HIS 199 ? 1_555 NI ? E NI . ? B NI 2 ? 1_555 N ? B GLY 1 ? B GLY 125 ? 1_555 81.7 ? 14 O ? J HOH . ? B HOH 4 ? 1_555 NI ? E NI . ? B NI 2 ? 1_555 N ? B GLY 1 ? B GLY 125 ? 1_555 170.5 ? 15 O ? J HOH . ? B HOH 5 ? 1_555 NI ? E NI . ? B NI 2 ? 1_555 N ? B GLY 1 ? B GLY 125 ? 1_555 83.6 ? 16 O ? J HOH . ? B HOH 6 ? 1_555 NI ? E NI . ? B NI 2 ? 1_555 N ? B GLY 1 ? B GLY 125 ? 1_555 95.8 ? 17 NE2 ? A HIS 75 ? A HIS 199 ? 1_555 NI ? E NI . ? B NI 2 ? 1_555 O ? B GLY 1 ? B GLY 125 ? 1_555 89.1 ? 18 O ? J HOH . ? B HOH 4 ? 1_555 NI ? E NI . ? B NI 2 ? 1_555 O ? B GLY 1 ? B GLY 125 ? 1_555 89.2 ? 19 O ? J HOH . ? B HOH 5 ? 1_555 NI ? E NI . ? B NI 2 ? 1_555 O ? B GLY 1 ? B GLY 125 ? 1_555 92.1 ? 20 O ? J HOH . ? B HOH 6 ? 1_555 NI ? E NI . ? B NI 2 ? 1_555 O ? B GLY 1 ? B GLY 125 ? 1_555 176.9 ? 21 N ? B GLY 1 ? B GLY 125 ? 1_555 NI ? E NI . ? B NI 2 ? 1_555 O ? B GLY 1 ? B GLY 125 ? 1_555 85.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-10-21 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-11 4 'Structure model' 1 3 2021-11-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' database_2 3 4 'Structure model' pdbx_struct_conn_angle 4 4 'Structure model' struct_conn 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 19 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 32 4 'Structure model' '_struct_ref_seq_dif.details' 33 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 34 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 35 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0035 ? 1 HKL-2000 'data reduction' . ? 2 and 'data scaling' SCALA ? 3 SHELXCD phasing . ? 4 SHELXE 'model building' . ? 5 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id C _pdbx_validate_torsion.auth_seq_id 137 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 59.49 _pdbx_validate_torsion.psi 11.19 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 125 ? A GLY 1 2 1 Y 1 A SER 126 ? A SER 2 3 1 Y 1 A GLY 219 ? A GLY 95 4 1 Y 1 A PRO 220 ? A PRO 96 5 1 Y 1 A GLN 221 ? A GLN 97 6 1 Y 1 B GLY 219 ? B GLY 95 7 1 Y 1 B PRO 220 ? B PRO 96 8 1 Y 1 B GLN 221 ? B GLN 97 9 1 Y 1 C PHE 185 ? C PHE 61 10 1 Y 1 C GLY 186 ? C GLY 62 11 1 Y 1 C SER 187 ? C SER 63 12 1 Y 1 C ASP 188 ? C ASP 64 13 1 Y 1 C GLN 189 ? C GLN 65 14 1 Y 1 C GLY 219 ? C GLY 95 15 1 Y 1 C PRO 220 ? C PRO 96 16 1 Y 1 C GLN 221 ? C GLN 97 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NICKEL (II) ION' NI 3 GLYCEROL GOL 4 water HOH #