HEADER CONTRACTILE PROTEIN 05-DEC-08 2ZWH TITLE MODEL FOR THE F-ACTIN STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTIN, ALPHA SKELETAL MUSCLE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ALPHA-ACTIN-1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: RABBIT; SOURCE 4 ORGANISM_TAXID: 9986; SOURCE 5 OTHER_DETAILS: RABBIT SKELETAL MUSCLE KEYWDS F-ACTIN, G-ACTIN, CYTOSKELTON, CONTRACTILE PROTEIN, ATP-BINDING, KEYWDS 2 CYTOSKELETON, METHYLATION, MUSCLE PROTEIN, NUCLEOTIDE-BINDING, KEYWDS 3 PHOSPHOPROTEIN EXPDTA FIBER DIFFRACTION AUTHOR T.ODA,M.IWASA,T.AIHARA,Y.MAEDA,A.NARITA REVDAT 6 11-OCT-17 2ZWH 1 REMARK REVDAT 5 14-OCT-15 2ZWH 1 REMARK REVDAT 4 11-FEB-15 2ZWH 1 CRYST1 VERSN REVDAT 3 05-JAN-10 2ZWH 1 JRNL REVDAT 2 27-JAN-09 2ZWH 1 JRNL REVDAT 1 20-JAN-09 2ZWH 0 JRNL AUTH T.ODA,M.IWASA,T.AIHARA,Y.MAEDA,A.NARITA JRNL TITL THE NATURE OF THE GLOBULAR- TO FIBROUS-ACTIN TRANSITION. JRNL REF NATURE V. 457 441 2009 JRNL REFN ISSN 0028-0836 JRNL PMID 19158791 JRNL DOI 10.1038/NATURE07685 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2933 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THE DIFFRACTION DATA WERE EXTRACTED USING THE PROPER HELICAL REMARK 3 SYMMETRY SUCH AS A SELECTION RULE L=-153N+331M AND A REPEAT REMARK 3 DISTANCE 9135 ANGSTRUM. THE LAYER-LINE DISTRIBUTION BY THE REMARK 3 SELECTOIN RULE IS CLOSE TO THAT BY L=-6N+13M IN PRINCILE REMARK 3 ONE LAYER-LINE BY L=-6N+13M SEPARATES SEVERAL LAYER-LINES REMARK 3 BY L=-153N+331M. BUT THE SEPARATIONS WERE NOT CLEAR AND REMARK 3 THE LAYER-LINE INTENSITYIES WERE EXTRACTED AS "GROUPING REMARK 3 LAYER-LINE INTENSITIES" FROM EXPERIMANTAL PATTERNS. REMARK 3 THEN THE LAYER-LINE INTENSTITIES WERE HANDLED AS REMARK 3 "GROUPING LAYER-LINE INTENSITIES" RE-INDEXED BY L=-6N+13M. REMARK 3 THE INITIAL MODELS OF F-ACTIN WERE MADE FROM THE THREE REMARK 3 CRYSTAL STRUCTURE OF 1J6Z, 2BTF AND 1HLU. REMARK 3 FIRST THE RADIUS AND THREE ORIENTAIONS OF THE SUBUNIT IN REMARK 3 F-ACTIN WERE DETERMINED BY THE RIGID BODY SEARCH USING THE REMARK 3 DIFFRACTION DATA OF 56-7.2 ANGSTROM. NEXT THE SUBUNIT REMARK 3 COMFORMATIONS WERE SEARCHED ALONG THE ADDITIONAL 12 LOWEST REMARK 3 ELASTIC NORMAL MODES OF ACTIN MONOMER VIBRATIONS BY REMARK 3 COMPARISON BETWEEN THE EXPERIMETAL DIFFRACTION DATA AND THE REMARK 3 CALCULATION AT 56-7.2 ANGSTROM. THE DIFFRACTION WAS REMARK 3 CALCULATED USING A REPEAT DISTANCE OF 9135A AND A SELECTION REMARK 3 RULE L=-153N+331M. THE CALCULATED LAYER-LINE INTENSTITIES REMARK 3 ALSO WERE HANDLED A "GROUPING LAYER-LINE INTENSITIES" REMARK 3 RE-INDEXED BY L=- 6N+13M. WE CAN NOT FIND THE GOOD SOLVENT REMARK 3 MODEL AROUND F-ACTIN. THEN WE USED TWO KINDS OF ATOMIC REMARK 3 SCATTERING FACTORS AT THE HIGH RESOLUTION AND THE LOW REMARK 3 RESOLUTION DATA.THE MOLECULAR DYNAMICS REFINEMENT AND REMARK 3 ENERGY-MINIMIZATION WERE REPEATED IN TRUN USING THE LOW REMARK 3 RESOLUTION DATA (RADIALLY 6.5-56 A FROM ORIGIN) AND REMARK 3 THE HIGH RESOLUTION DATA (RADIALLY 3.3-5.5 A AND LATERALLY REMARK 3 FROM THE MERIDIAN TO 5.5 A) BY FX-PLOR. TO JUDGE THE MODELS, REMARK 3 TWO KINDS OF R-FACTORS WERE CALUCLATED AGAINT THE DIFFRACTION REMARK 3 PATTERN TO AVOID THE DECOMVOLUTION ERROR. R-FACTOR-FIT IS AN REMARK 3 R-FACTOR AGAINST FITTING AREA (THE AREA RADIAL 6.5-56 AND REMARK 3 3.6-5.5A AND LATERALLY FROM THE MERIDIAN TO 5.8 A). REMARK 3 THE R-FACTOR-NON-FIT IS AN R-FACTOR AGAINST NON-FITTING AREA REMARK 3 (THE AREA RADIALLY 5.5 - 6.5 A AND LATERALLY TO 15 A). REMARK 3 R-FACTOR-FIT : 0.143 R-FACTOR-NON-FIT : 0.207 REMARK 4 REMARK 4 2ZWH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-DEC-08. REMARK 100 THE DEPOSITION ID IS D_1000028512. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : FIBER DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-OCT-98; 17-SEP-01; 28-MAY-04; REMARK 200 18-NOV-06 REMARK 200 TEMPERATURE (KELVIN) : NULL; NULL; NULL; NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y; Y; Y REMARK 200 RADIATION SOURCE : SPRING-8; SPRING-8; SPRING-8; REMARK 200 SPRING-8 REMARK 200 BEAMLINE : BL41XU; BL40B2; BL40B2; BL45XU REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL; NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M; M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0; 1.0; 1.0; 0.9 REMARK 200 MONOCHROMATOR : NULL; NULL; NULL; NULL REMARK 200 OPTICS : NULL; NULL; NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE; IMAGE PLATE; IMAGE REMARK 200 PLATE; IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV; RIGAKU RAXIS REMARK 200 IV; RIGAKU RAXIS IV; RIGAKU REMARK 200 RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL; NULL; NULL; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 205 REMARK 205 FIBER DIFFRACTION REMARK 205 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM FIBER REMARK 205 DIFFRACTION DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 205 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE REMARK 205 VALUES ON THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: F-ACTIN IS A HELICAL POLYMER OF ACTIN MOLECULES. THE Z-AXIS REMARK 300 OF THE ACTIN COORDINATES SHOWN IN THIS PDB-FILE IS A HELIX AXIS. REMARK 300 THE NEXT SUBUNIT IN F-ACTIN IS POSITIONED BY 166.4 DEGREE RIGHT REMARK 300 ROTATION ABOUT THE HELIX AXIS AND 27.59 ANGSTROM SHIFT ALONG THE REMARK 300 HELIX AXIS. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 88 NE2 HIS A 88 CD2 -0.069 REMARK 500 HIS A 101 NE2 HIS A 101 CD2 -0.074 REMARK 500 HIS A 161 NE2 HIS A 161 CD2 -0.073 REMARK 500 HIS A 173 NE2 HIS A 173 CD2 -0.073 REMARK 500 HIS A 275 NE2 HIS A 275 CD2 -0.070 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 28 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 28 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG A 39 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 PRO A 70 C - N - CD ANGL. DEV. = -12.9 DEGREES REMARK 500 TRP A 79 CD1 - CG - CD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 TRP A 79 CE2 - CD2 - CG ANGL. DEV. = -6.4 DEGREES REMARK 500 TRP A 86 CD1 - CG - CD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 TRP A 86 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG A 147 CA - CB - CG ANGL. DEV. = 13.4 DEGREES REMARK 500 TYR A 169 CB - CG - CD2 ANGL. DEV. = -4.1 DEGREES REMARK 500 TYR A 240 CB - CG - CD1 ANGL. DEV. = -4.4 DEGREES REMARK 500 PRO A 264 C - N - CD ANGL. DEV. = -13.0 DEGREES REMARK 500 TYR A 279 CB - CG - CD1 ANGL. DEV. = -3.7 DEGREES REMARK 500 TRP A 340 CD1 - CG - CD2 ANGL. DEV. = 6.7 DEGREES REMARK 500 TRP A 340 CB - CG - CD1 ANGL. DEV. = -8.2 DEGREES REMARK 500 TRP A 340 CE2 - CD2 - CG ANGL. DEV. = -6.6 DEGREES REMARK 500 TRP A 340 CG - CD2 - CE3 ANGL. DEV. = 5.8 DEGREES REMARK 500 TRP A 356 CD1 - CG - CD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 TRP A 356 CE2 - CD2 - CG ANGL. DEV. = -5.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 2 -134.03 41.64 REMARK 500 ASP A 3 -7.88 -59.04 REMARK 500 THR A 6 -165.24 59.86 REMARK 500 ALA A 7 -172.77 173.62 REMARK 500 PHE A 21 -116.00 -92.74 REMARK 500 ARG A 28 -68.78 -130.01 REMARK 500 GLN A 41 -136.81 54.20 REMARK 500 VAL A 45 -64.97 -156.34 REMARK 500 GLN A 49 25.43 43.50 REMARK 500 ASP A 51 -68.14 -90.33 REMARK 500 LYS A 61 42.29 -109.56 REMARK 500 PRO A 70 -73.60 -104.11 REMARK 500 ILE A 71 46.90 -82.57 REMARK 500 HIS A 88 -79.30 -66.15 REMARK 500 THR A 89 -72.68 -15.23 REMARK 500 GLU A 100 -42.16 -175.03 REMARK 500 LEU A 110 43.08 77.64 REMARK 500 MET A 123 -92.55 -75.91 REMARK 500 ASN A 128 74.00 -37.57 REMARK 500 GLN A 137 -93.96 9.95 REMARK 500 ASP A 157 -71.78 -114.21 REMARK 500 GLU A 167 -1.84 -55.23 REMARK 500 HIS A 173 -30.73 166.07 REMARK 500 LEU A 180 28.74 -170.50 REMARK 500 SER A 199 96.77 -169.53 REMARK 500 THR A 202 -168.02 -101.39 REMARK 500 LEU A 216 -34.28 -153.83 REMARK 500 ASP A 222 86.65 -154.04 REMARK 500 SER A 234 -63.90 -167.51 REMARK 500 LEU A 236 -83.90 -66.93 REMARK 500 PRO A 243 72.50 -68.76 REMARK 500 ASP A 244 -64.30 -169.47 REMARK 500 GLN A 246 125.24 174.58 REMARK 500 ILE A 250 92.01 -68.98 REMARK 500 ASP A 286 153.48 -44.84 REMARK 500 ILE A 309 -41.55 -143.19 REMARK 500 LYS A 315 -71.30 -72.07 REMARK 500 THR A 324 -6.28 -41.65 REMARK 500 LYS A 328 113.18 -161.39 REMARK 500 TYR A 337 30.06 -79.13 REMARK 500 ALA A 347 58.62 -91.78 REMARK 500 SER A 348 -32.89 -163.48 REMARK 500 GLN A 354 52.74 -91.39 REMARK 500 MET A 355 -85.73 -154.54 REMARK 500 TRP A 356 166.14 -33.44 REMARK 500 SER A 368 -6.48 -57.66 REMARK 500 LYS A 373 -64.70 -92.69 REMARK 500 CYS A 374 -143.83 -95.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 108 PRO A 109 -147.36 REMARK 500 ALA A 321 PRO A 322 147.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 116 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 377 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 137 OE1 REMARK 620 2 ADP A 376 O3B 134.6 REMARK 620 3 ADP A 376 O1B 157.3 62.9 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 376 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 377 DBREF 2ZWH A 1 375 UNP P68135 ACTS_RABIT 3 377 SEQRES 1 A 375 ASP GLU ASP GLU THR THR ALA LEU VAL CYS ASP ASN GLY SEQRES 2 A 375 SER GLY LEU VAL LYS ALA GLY PHE ALA GLY ASP ASP ALA SEQRES 3 A 375 PRO ARG ALA VAL PHE PRO SER ILE VAL GLY ARG PRO ARG SEQRES 4 A 375 HIS GLN GLY VAL MET VAL GLY MET GLY GLN LYS ASP SER SEQRES 5 A 375 TYR VAL GLY ASP GLU ALA GLN SER LYS ARG GLY ILE LEU SEQRES 6 A 375 THR LEU LYS TYR PRO ILE GLU HIC GLY ILE ILE THR ASN SEQRES 7 A 375 TRP ASP ASP MET GLU LYS ILE TRP HIS HIS THR PHE TYR SEQRES 8 A 375 ASN GLU LEU ARG VAL ALA PRO GLU GLU HIS PRO THR LEU SEQRES 9 A 375 LEU THR GLU ALA PRO LEU ASN PRO LYS ALA ASN ARG GLU SEQRES 10 A 375 LYS MET THR GLN ILE MET PHE GLU THR PHE ASN VAL PRO SEQRES 11 A 375 ALA MET TYR VAL ALA ILE GLN ALA VAL LEU SER LEU TYR SEQRES 12 A 375 ALA SER GLY ARG THR THR GLY ILE VAL LEU ASP SER GLY SEQRES 13 A 375 ASP GLY VAL THR HIS ASN VAL PRO ILE TYR GLU GLY TYR SEQRES 14 A 375 ALA LEU PRO HIS ALA ILE MET ARG LEU ASP LEU ALA GLY SEQRES 15 A 375 ARG ASP LEU THR ASP TYR LEU MET LYS ILE LEU THR GLU SEQRES 16 A 375 ARG GLY TYR SER PHE VAL THR THR ALA GLU ARG GLU ILE SEQRES 17 A 375 VAL ARG ASP ILE LYS GLU LYS LEU CYS TYR VAL ALA LEU SEQRES 18 A 375 ASP PHE GLU ASN GLU MET ALA THR ALA ALA SER SER SER SEQRES 19 A 375 SER LEU GLU LYS SER TYR GLU LEU PRO ASP GLY GLN VAL SEQRES 20 A 375 ILE THR ILE GLY ASN GLU ARG PHE ARG CYS PRO GLU THR SEQRES 21 A 375 LEU PHE GLN PRO SER PHE ILE GLY MET GLU SER ALA GLY SEQRES 22 A 375 ILE HIS GLU THR THR TYR ASN SER ILE MET LYS CYS ASP SEQRES 23 A 375 ILE ASP ILE ARG LYS ASP LEU TYR ALA ASN ASN VAL MET SEQRES 24 A 375 SER GLY GLY THR THR MET TYR PRO GLY ILE ALA ASP ARG SEQRES 25 A 375 MET GLN LYS GLU ILE THR ALA LEU ALA PRO SER THR MET SEQRES 26 A 375 LYS ILE LYS ILE ILE ALA PRO PRO GLU ARG LYS TYR SER SEQRES 27 A 375 VAL TRP ILE GLY GLY SER ILE LEU ALA SER LEU SER THR SEQRES 28 A 375 PHE GLN GLN MET TRP ILE THR LYS GLN GLU TYR ASP GLU SEQRES 29 A 375 ALA GLY PRO SER ILE VAL HIS ARG LYS CYS PHE MODRES 2ZWH HIC A 73 HIS 4-METHYL-HISTIDINE HET HIC A 73 11 HET ADP A 376 27 HET CA A 377 1 HETNAM HIC 4-METHYL-HISTIDINE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM CA CALCIUM ION FORMUL 1 HIC C7 H11 N3 O2 FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 CA CA 2+ HELIX 1 1 GLY A 55 LYS A 61 1 7 HELIX 2 2 ILE A 71 ILE A 75 5 5 HELIX 3 3 TRP A 79 GLU A 93 1 15 HELIX 4 4 PRO A 112 GLU A 125 1 14 HELIX 5 5 GLN A 137 SER A 145 1 9 HELIX 6 6 ALA A 181 THR A 194 1 14 HELIX 7 7 THR A 202 LYS A 215 1 14 HELIX 8 8 ASP A 222 ALA A 230 1 9 HELIX 9 9 ASN A 252 THR A 260 1 9 HELIX 10 10 LEU A 261 PHE A 262 5 2 HELIX 11 11 GLN A 263 ILE A 267 5 5 HELIX 12 12 GLY A 273 LYS A 284 1 12 HELIX 13 13 ILE A 287 ILE A 289 5 3 HELIX 14 14 ARG A 290 ASN A 296 1 7 HELIX 15 15 GLY A 302 TYR A 306 5 5 HELIX 16 16 ILE A 309 ALA A 319 1 11 HELIX 17 17 TYR A 337 ALA A 347 1 11 HELIX 18 18 SER A 348 LEU A 349 5 2 HELIX 19 19 SER A 350 GLN A 354 5 5 HELIX 20 20 LYS A 359 GLU A 364 1 6 HELIX 21 21 ALA A 365 PRO A 367 5 3 HELIX 22 22 SER A 368 CYS A 374 1 7 SHEET 1 A 3 CYS A 10 ASN A 12 0 SHEET 2 A 3 LEU A 16 ALA A 19 -1 O LYS A 18 N ASP A 11 SHEET 3 A 3 ALA A 29 PRO A 32 -1 O PHE A 31 N VAL A 17 SHEET 1 B 3 TYR A 53 VAL A 54 0 SHEET 2 B 3 VAL A 35 PRO A 38 -1 N GLY A 36 O TYR A 53 SHEET 3 B 3 LEU A 65 LYS A 68 -1 O LYS A 68 N VAL A 35 SHEET 1 C 3 PRO A 102 GLU A 107 0 SHEET 2 C 3 ALA A 131 ILE A 136 1 O ALA A 131 N THR A 103 SHEET 3 C 3 ILE A 357 THR A 358 -1 O ILE A 357 N MET A 132 SHEET 1 D 5 MET A 176 LEU A 178 0 SHEET 2 D 5 THR A 160 ILE A 165 -1 N THR A 160 O LEU A 178 SHEET 3 D 5 GLY A 150 ASP A 154 -1 N VAL A 152 O VAL A 163 SHEET 4 D 5 ASN A 297 SER A 300 1 O SER A 300 N LEU A 153 SHEET 5 D 5 ILE A 329 ILE A 330 1 O ILE A 330 N MET A 299 SHEET 1 E 2 TYR A 240 GLU A 241 0 SHEET 2 E 2 VAL A 247 ILE A 248 -1 O ILE A 248 N TYR A 240 LINK C GLU A 72 N HIC A 73 1555 1555 1.34 LINK C HIC A 73 N GLY A 74 1555 1555 1.34 LINK OE1 GLN A 137 CA CA A 377 1555 1555 2.40 LINK O3B ADP A 376 CA CA A 377 1555 1555 2.17 LINK O1B ADP A 376 CA CA A 377 1555 1555 1.96 SITE 1 AC1 18 GLY A 13 SER A 14 GLY A 15 LEU A 16 SITE 2 AC1 18 LYS A 18 GLY A 156 ASP A 157 GLY A 182 SITE 3 AC1 18 ARG A 183 THR A 186 ARG A 210 LYS A 213 SITE 4 AC1 18 GLU A 214 GLY A 302 MET A 305 TYR A 306 SITE 5 AC1 18 LYS A 336 CA A 377 SITE 1 AC2 3 ASP A 11 GLN A 137 ADP A 376 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000