HEADER CARBOXYSOME 18-JUN-05 2A18 TITLE CARBOXYSOME SHELL PROTEIN CCMK4, CRYSTAL FORM 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBON DIOXIDE CONCENTRATING MECHANISM PROTEIN CCMK HOMOLOG COMPND 3 4; COMPND 4 CHAIN: A, B, C; COMPND 5 SYNONYM: CCMK4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCYSTIS SP.; SOURCE 3 ORGANISM_TAXID: 1148; SOURCE 4 STRAIN: PCC 6803; SOURCE 5 GENE: CCMK4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-GOLD DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS CYCLIC HEXAMER; C6 POINT SYMMETRY, CARBOXYSOME EXPDTA X-RAY DIFFRACTION AUTHOR C.A.KERFELD,M.R.SAWAYA,S.TANAKA,C.V.NGUYEN,M.PHILLIPS,M.BEEBY, AUTHOR 2 T.O.YEATES REVDAT 5 23-AUG-23 2A18 1 REMARK SEQADV REVDAT 4 11-OCT-17 2A18 1 REMARK REVDAT 3 13-JUL-11 2A18 1 VERSN REVDAT 2 24-FEB-09 2A18 1 VERSN REVDAT 1 09-AUG-05 2A18 0 JRNL AUTH C.A.KERFELD,M.R.SAWAYA,S.TANAKA,C.V.NGUYEN,M.PHILLIPS, JRNL AUTH 2 M.BEEBY,T.O.YEATES JRNL TITL PROTEIN STRUCTURES FORMING THE SHELL OF PRIMITIVE BACTERIAL JRNL TITL 2 ORGANELLES JRNL REF SCIENCE V. 309 936 2005 JRNL REFN ISSN 0036-8075 JRNL PMID 16081736 JRNL DOI 10.1126/SCIENCE.1113397 REMARK 2 REMARK 2 RESOLUTION. 2.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 62.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 13071 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 686 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.28 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.34 REMARK 3 REFLECTION IN BIN (WORKING SET) : 935 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2340 REMARK 3 BIN FREE R VALUE SET COUNT : 57 REMARK 3 BIN FREE R VALUE : 0.2650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2325 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 80 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 42.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.78000 REMARK 3 B22 (A**2) : 1.30000 REMARK 3 B33 (A**2) : 0.48000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.395 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.222 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.163 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.331 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2367 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3222 ; 1.006 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 309 ; 4.292 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 96 ;36.437 ;23.438 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 375 ;13.374 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;18.779 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 381 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1797 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1109 ; 0.190 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1689 ; 0.291 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 132 ; 0.103 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 69 ; 0.158 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.120 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1597 ; 0.635 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2505 ; 1.129 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 858 ; 1.161 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 717 ; 2.019 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 5 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 4 A 29 1 REMARK 3 1 B 4 B 29 1 REMARK 3 1 C 4 C 29 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 172 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 172 ; 0.02 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 C (A): 172 ; 0.01 ; 0.05 REMARK 3 TIGHT THERMAL 1 A (A**2): 172 ; 0.03 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 172 ; 0.03 ; 0.50 REMARK 3 TIGHT THERMAL 1 C (A**2): 172 ; 0.03 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 39 A 72 1 REMARK 3 1 B 39 B 72 1 REMARK 3 1 C 39 C 72 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 A (A): 244 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 B (A): 244 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 C (A): 244 ; 0.01 ; 0.05 REMARK 3 TIGHT THERMAL 2 A (A**2): 244 ; 0.03 ; 0.50 REMARK 3 TIGHT THERMAL 2 B (A**2): 244 ; 0.03 ; 0.50 REMARK 3 TIGHT THERMAL 2 C (A**2): 244 ; 0.03 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 74 A 81 1 REMARK 3 1 B 74 B 81 1 REMARK 3 1 C 74 C 81 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 3 A (A): 67 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 3 B (A): 67 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 3 C (A): 67 ; 0.01 ; 0.05 REMARK 3 TIGHT THERMAL 3 A (A**2): 67 ; 0.02 ; 0.50 REMARK 3 TIGHT THERMAL 3 B (A**2): 67 ; 0.02 ; 0.50 REMARK 3 TIGHT THERMAL 3 C (A**2): 67 ; 0.02 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 4 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 83 A 107 1 REMARK 3 1 B 83 B 107 1 REMARK 3 1 C 83 C 107 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 4 A (A): 198 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 4 B (A): 198 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 4 C (A): 198 ; 0.01 ; 0.05 REMARK 3 TIGHT THERMAL 4 A (A**2): 198 ; 0.02 ; 0.50 REMARK 3 TIGHT THERMAL 4 B (A**2): 198 ; 0.02 ; 0.50 REMARK 3 TIGHT THERMAL 4 C (A**2): 198 ; 0.02 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 5 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 31 A 37 1 REMARK 3 1 B 31 B 37 1 REMARK 3 1 C 31 C 37 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 5 A (A): 54 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 5 B (A): 54 ; 0.01 ; 0.05 REMARK 3 TIGHT POSITIONAL 5 C (A): 54 ; 0.01 ; 0.05 REMARK 3 TIGHT THERMAL 5 A (A**2): 54 ; 0.03 ; 0.50 REMARK 3 TIGHT THERMAL 5 B (A**2): 54 ; 0.03 ; 0.50 REMARK 3 TIGHT THERMAL 5 C (A**2): 54 ; 0.03 ; 0.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 107 REMARK 3 ORIGIN FOR THE GROUP (A): 16.4848 12.5386 15.5039 REMARK 3 T TENSOR REMARK 3 T11: -0.0826 T22: -0.0507 REMARK 3 T33: -0.0869 T12: 0.0401 REMARK 3 T13: -0.0268 T23: -0.0778 REMARK 3 L TENSOR REMARK 3 L11: 2.9337 L22: 2.8500 REMARK 3 L33: 1.8271 L12: 1.4596 REMARK 3 L13: -0.7592 L23: -0.9892 REMARK 3 S TENSOR REMARK 3 S11: 0.0031 S12: -0.0624 S13: 0.0959 REMARK 3 S21: 0.1783 S22: -0.0980 S23: 0.0250 REMARK 3 S31: -0.2089 S32: -0.0771 S33: 0.0949 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 107 REMARK 3 ORIGIN FOR THE GROUP (A): 14.9823 -9.9831 15.5258 REMARK 3 T TENSOR REMARK 3 T11: -0.1024 T22: -0.0170 REMARK 3 T33: -0.0603 T12: -0.0726 REMARK 3 T13: 0.0523 T23: -0.0837 REMARK 3 L TENSOR REMARK 3 L11: 1.9296 L22: 4.0670 REMARK 3 L33: 2.2511 L12: -1.3908 REMARK 3 L13: 0.4411 L23: -0.7960 REMARK 3 S TENSOR REMARK 3 S11: -0.0972 S12: -0.0900 S13: -0.0638 REMARK 3 S21: 0.1536 S22: -0.0673 S23: 0.1436 REMARK 3 S31: 0.1044 S32: -0.2310 S33: 0.1644 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 4 C 107 REMARK 3 ORIGIN FOR THE GROUP (A): 36.7655 22.4717 15.5400 REMARK 3 T TENSOR REMARK 3 T11: -0.0091 T22: -0.0944 REMARK 3 T33: -0.0758 T12: -0.0373 REMARK 3 T13: -0.0910 T23: -0.0152 REMARK 3 L TENSOR REMARK 3 L11: 4.3042 L22: 1.8517 REMARK 3 L33: 1.7798 L12: -0.4545 REMARK 3 L13: -0.9752 L23: -0.0329 REMARK 3 S TENSOR REMARK 3 S11: -0.0186 S12: -0.1783 S13: 0.1393 REMARK 3 S21: 0.0892 S22: -0.0890 S23: -0.0650 REMARK 3 S31: -0.1683 S32: 0.1124 S33: 0.1075 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2A18 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUL-05. REMARK 100 THE DEPOSITION ID IS D_1000033364. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95373 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DCS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13846 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.280 REMARK 200 RESOLUTION RANGE LOW (A) : 90.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11300 REMARK 200 FOR THE DATA SET : 23.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.37300 REMARK 200 FOR SHELL : 8.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2A10 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CITRATE, PH 4.6, 30% PEG REMARK 280 4000, 0.2M AMMONIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 35.27450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 62.52000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.27450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 62.52000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS GENERATED BY THE TWO-FOLD AXIS: REMARK 300 1-X,-Y,Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 13640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -97.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 70.54900 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ALA A 3 REMARK 465 GLY A 108 REMARK 465 LEU A 109 REMARK 465 ASN A 110 REMARK 465 ARG A 111 REMARK 465 ARG A 112 REMARK 465 GLY A 113 REMARK 465 VAL A 114 REMARK 465 PRO A 115 REMARK 465 ARG A 116 REMARK 465 GLY A 117 REMARK 465 LEU A 118 REMARK 465 GLU A 119 REMARK 465 HIS A 120 REMARK 465 HIS A 121 REMARK 465 HIS A 122 REMARK 465 HIS A 123 REMARK 465 HIS A 124 REMARK 465 HIS A 125 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ALA B 3 REMARK 465 GLY B 108 REMARK 465 LEU B 109 REMARK 465 ASN B 110 REMARK 465 ARG B 111 REMARK 465 ARG B 112 REMARK 465 GLY B 113 REMARK 465 VAL B 114 REMARK 465 PRO B 115 REMARK 465 ARG B 116 REMARK 465 GLY B 117 REMARK 465 LEU B 118 REMARK 465 GLU B 119 REMARK 465 HIS B 120 REMARK 465 HIS B 121 REMARK 465 HIS B 122 REMARK 465 HIS B 123 REMARK 465 HIS B 124 REMARK 465 HIS B 125 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 ALA C 3 REMARK 465 GLY C 108 REMARK 465 LEU C 109 REMARK 465 ASN C 110 REMARK 465 ARG C 111 REMARK 465 ARG C 112 REMARK 465 GLY C 113 REMARK 465 VAL C 114 REMARK 465 PRO C 115 REMARK 465 ARG C 116 REMARK 465 GLY C 117 REMARK 465 LEU C 118 REMARK 465 GLU C 119 REMARK 465 HIS C 120 REMARK 465 HIS C 121 REMARK 465 HIS C 122 REMARK 465 HIS C 123 REMARK 465 HIS C 124 REMARK 465 HIS C 125 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 A 126 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 B 126 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH4 C 126 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2A10 RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN A DIFFERENT CRYSTAL PACKING REMARK 900 RELATED ID: 2A1B RELATED DB: PDB REMARK 900 CCMK2, AN ORTHOLOG AND ALSO A COMPONENT OF THE CARBOXYSOME SHELL DBREF 2A18 A 2 112 UNP P73407 CCMK4_SYNY3 1 111 DBREF 2A18 B 2 112 UNP P73407 CCMK4_SYNY3 1 111 DBREF 2A18 C 2 112 UNP P73407 CCMK4_SYNY3 1 111 SEQADV 2A18 MET A 1 UNP P73407 INITIATING METHIONINE SEQADV 2A18 GLY A 113 UNP P73407 EXPRESSION TAG SEQADV 2A18 VAL A 114 UNP P73407 EXPRESSION TAG SEQADV 2A18 PRO A 115 UNP P73407 EXPRESSION TAG SEQADV 2A18 ARG A 116 UNP P73407 EXPRESSION TAG SEQADV 2A18 GLY A 117 UNP P73407 EXPRESSION TAG SEQADV 2A18 LEU A 118 UNP P73407 EXPRESSION TAG SEQADV 2A18 GLU A 119 UNP P73407 EXPRESSION TAG SEQADV 2A18 HIS A 120 UNP P73407 EXPRESSION TAG SEQADV 2A18 HIS A 121 UNP P73407 EXPRESSION TAG SEQADV 2A18 HIS A 122 UNP P73407 EXPRESSION TAG SEQADV 2A18 HIS A 123 UNP P73407 EXPRESSION TAG SEQADV 2A18 HIS A 124 UNP P73407 EXPRESSION TAG SEQADV 2A18 HIS A 125 UNP P73407 EXPRESSION TAG SEQADV 2A18 MET B 1 UNP P73407 INITIATING METHIONINE SEQADV 2A18 GLY B 113 UNP P73407 EXPRESSION TAG SEQADV 2A18 VAL B 114 UNP P73407 EXPRESSION TAG SEQADV 2A18 PRO B 115 UNP P73407 EXPRESSION TAG SEQADV 2A18 ARG B 116 UNP P73407 EXPRESSION TAG SEQADV 2A18 GLY B 117 UNP P73407 EXPRESSION TAG SEQADV 2A18 LEU B 118 UNP P73407 EXPRESSION TAG SEQADV 2A18 GLU B 119 UNP P73407 EXPRESSION TAG SEQADV 2A18 HIS B 120 UNP P73407 EXPRESSION TAG SEQADV 2A18 HIS B 121 UNP P73407 EXPRESSION TAG SEQADV 2A18 HIS B 122 UNP P73407 EXPRESSION TAG SEQADV 2A18 HIS B 123 UNP P73407 EXPRESSION TAG SEQADV 2A18 HIS B 124 UNP P73407 EXPRESSION TAG SEQADV 2A18 HIS B 125 UNP P73407 EXPRESSION TAG SEQADV 2A18 MET C 1 UNP P73407 INITIATING METHIONINE SEQADV 2A18 GLY C 113 UNP P73407 EXPRESSION TAG SEQADV 2A18 VAL C 114 UNP P73407 EXPRESSION TAG SEQADV 2A18 PRO C 115 UNP P73407 EXPRESSION TAG SEQADV 2A18 ARG C 116 UNP P73407 EXPRESSION TAG SEQADV 2A18 GLY C 117 UNP P73407 EXPRESSION TAG SEQADV 2A18 LEU C 118 UNP P73407 EXPRESSION TAG SEQADV 2A18 GLU C 119 UNP P73407 EXPRESSION TAG SEQADV 2A18 HIS C 120 UNP P73407 EXPRESSION TAG SEQADV 2A18 HIS C 121 UNP P73407 EXPRESSION TAG SEQADV 2A18 HIS C 122 UNP P73407 EXPRESSION TAG SEQADV 2A18 HIS C 123 UNP P73407 EXPRESSION TAG SEQADV 2A18 HIS C 124 UNP P73407 EXPRESSION TAG SEQADV 2A18 HIS C 125 UNP P73407 EXPRESSION TAG SEQRES 1 A 125 MET SER ALA GLN SER ALA VAL GLY SER ILE GLU THR ILE SEQRES 2 A 125 GLY PHE PRO GLY ILE LEU ALA ALA ALA ASP ALA MET VAL SEQRES 3 A 125 LYS ALA GLY ARG ILE THR ILE VAL GLY TYR ILE ARG ALA SEQRES 4 A 125 GLY SER ALA ARG PHE THR LEU ASN ILE ARG GLY ASP VAL SEQRES 5 A 125 GLN GLU VAL LYS THR ALA MET ALA ALA GLY ILE ASP ALA SEQRES 6 A 125 ILE ASN ARG THR GLU GLY ALA ASP VAL LYS THR TRP VAL SEQRES 7 A 125 ILE ILE PRO ARG PRO HIS GLU ASN VAL VAL ALA VAL LEU SEQRES 8 A 125 PRO ILE ASP PHE SER PRO GLU VAL GLU PRO PHE ARG GLU SEQRES 9 A 125 ALA ALA GLU GLY LEU ASN ARG ARG GLY VAL PRO ARG GLY SEQRES 10 A 125 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 125 MET SER ALA GLN SER ALA VAL GLY SER ILE GLU THR ILE SEQRES 2 B 125 GLY PHE PRO GLY ILE LEU ALA ALA ALA ASP ALA MET VAL SEQRES 3 B 125 LYS ALA GLY ARG ILE THR ILE VAL GLY TYR ILE ARG ALA SEQRES 4 B 125 GLY SER ALA ARG PHE THR LEU ASN ILE ARG GLY ASP VAL SEQRES 5 B 125 GLN GLU VAL LYS THR ALA MET ALA ALA GLY ILE ASP ALA SEQRES 6 B 125 ILE ASN ARG THR GLU GLY ALA ASP VAL LYS THR TRP VAL SEQRES 7 B 125 ILE ILE PRO ARG PRO HIS GLU ASN VAL VAL ALA VAL LEU SEQRES 8 B 125 PRO ILE ASP PHE SER PRO GLU VAL GLU PRO PHE ARG GLU SEQRES 9 B 125 ALA ALA GLU GLY LEU ASN ARG ARG GLY VAL PRO ARG GLY SEQRES 10 B 125 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 125 MET SER ALA GLN SER ALA VAL GLY SER ILE GLU THR ILE SEQRES 2 C 125 GLY PHE PRO GLY ILE LEU ALA ALA ALA ASP ALA MET VAL SEQRES 3 C 125 LYS ALA GLY ARG ILE THR ILE VAL GLY TYR ILE ARG ALA SEQRES 4 C 125 GLY SER ALA ARG PHE THR LEU ASN ILE ARG GLY ASP VAL SEQRES 5 C 125 GLN GLU VAL LYS THR ALA MET ALA ALA GLY ILE ASP ALA SEQRES 6 C 125 ILE ASN ARG THR GLU GLY ALA ASP VAL LYS THR TRP VAL SEQRES 7 C 125 ILE ILE PRO ARG PRO HIS GLU ASN VAL VAL ALA VAL LEU SEQRES 8 C 125 PRO ILE ASP PHE SER PRO GLU VAL GLU PRO PHE ARG GLU SEQRES 9 C 125 ALA ALA GLU GLY LEU ASN ARG ARG GLY VAL PRO ARG GLY SEQRES 10 C 125 LEU GLU HIS HIS HIS HIS HIS HIS HET NH4 A 126 1 HET NH4 B 126 1 HET NH4 C 126 1 HETNAM NH4 AMMONIUM ION FORMUL 4 NH4 3(H4 N 1+) FORMUL 7 HOH *80(H2 O) HELIX 1 1 GLY A 14 GLY A 29 1 16 HELIX 2 2 ASP A 51 THR A 69 1 19 HELIX 3 3 HIS A 84 LEU A 91 1 8 HELIX 4 4 SER A 96 GLU A 98 5 3 HELIX 5 5 VAL A 99 GLU A 107 1 9 HELIX 6 6 GLY B 14 GLY B 29 1 16 HELIX 7 7 ASP B 51 THR B 69 1 19 HELIX 8 8 HIS B 84 LEU B 91 1 8 HELIX 9 9 SER B 96 GLU B 98 5 3 HELIX 10 10 VAL B 99 GLU B 107 1 9 HELIX 11 11 GLY C 14 GLY C 29 1 16 HELIX 12 12 ASP C 51 THR C 69 1 19 HELIX 13 13 HIS C 84 LEU C 91 1 8 HELIX 14 14 SER C 96 GLU C 98 5 3 HELIX 15 15 VAL C 99 GLU C 107 1 9 SHEET 1 A 4 ILE A 31 GLY A 40 0 SHEET 2 A 4 ARG A 43 GLY A 50 -1 O ARG A 49 N THR A 32 SHEET 3 A 4 ALA A 6 ILE A 13 -1 N GLY A 8 O ILE A 48 SHEET 4 A 4 VAL A 74 ILE A 80 -1 O ILE A 80 N VAL A 7 SHEET 1 B 4 THR B 32 GLY B 40 0 SHEET 2 B 4 ARG B 43 GLY B 50 -1 O ARG B 49 N THR B 32 SHEET 3 B 4 ALA B 6 ILE B 13 -1 N GLY B 8 O ILE B 48 SHEET 4 B 4 VAL B 74 ILE B 80 -1 O ILE B 80 N VAL B 7 SHEET 1 C 4 ILE C 31 GLY C 40 0 SHEET 2 C 4 ARG C 43 GLY C 50 -1 O ARG C 49 N THR C 32 SHEET 3 C 4 ALA C 6 ILE C 13 -1 N GLY C 8 O ILE C 48 SHEET 4 C 4 VAL C 74 ILE C 80 -1 O ILE C 80 N VAL C 7 SITE 1 AC1 5 ILE A 66 ASN A 67 THR A 69 ALA A 72 SITE 2 AC1 5 HOH A 132 SITE 1 AC2 5 ILE B 66 ASN B 67 THR B 69 ALA B 72 SITE 2 AC2 5 HOH B 128 SITE 1 AC3 6 ILE C 66 ASN C 67 THR C 69 ALA C 72 SITE 2 AC3 6 HOH C 134 HOH C 137 CRYST1 70.549 125.040 32.521 90.00 90.00 90.00 P 21 21 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014175 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007997 0.000000 0.00000 SCALE3 0.000000 0.000000 0.030749 0.00000