HEADER METAL BINDING PROTEIN 27-JUN-05 2A3Y TITLE PENTAMERIC CRYSTAL STRUCTURE OF HUMAN SERUM AMYLOID P-COMPONENT BOUND TITLE 2 TO BIS-1,2-{[(Z)-2CARBOXY-2-METHYL-1,3-DIOXANE]-5-YLOXYCARBAMOYL}- TITLE 3 ETHANE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERUM AMYLOID P-COMPONENT; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 SYNONYM: SAP, 9.5S ALPHA-1-GLYCOPROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.G.HO,P.I.KITOV,E.PASZKIEWICZ,J.SADOWSKA,D.R.BUNDLE,K.K.NG REVDAT 6 20-NOV-24 2A3Y 1 REMARK REVDAT 5 23-AUG-23 2A3Y 1 REMARK LINK REVDAT 4 13-JUL-11 2A3Y 1 VERSN REVDAT 3 24-FEB-09 2A3Y 1 VERSN REVDAT 2 27-SEP-05 2A3Y 1 JRNL REVDAT 1 26-JUL-05 2A3Y 0 JRNL AUTH J.G.HO,P.I.KITOV,E.PASZKIEWICZ,J.SADOWSKA,D.R.BUNDLE,K.K.NG JRNL TITL LIGAND-ASSISTED AGGREGATION OF PROTEINS: DIMERIZATION OF JRNL TITL 2 SERUM AMYLOID P COMPONENT BY BIVALENT LIGANDS. JRNL REF J.BIOL.CHEM. V. 280 31999 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 16036920 JRNL DOI 10.1074/JBC.M504403200 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 3 NUMBER OF REFLECTIONS : 79985 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4216 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5698 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.2200 REMARK 3 BIN FREE R VALUE SET COUNT : 316 REMARK 3 BIN FREE R VALUE : 0.2810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8245 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 75 REMARK 3 SOLVENT ATOMS : 478 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 18.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.22000 REMARK 3 B22 (A**2) : -1.11000 REMARK 3 B33 (A**2) : 2.38000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.20000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.198 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.172 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.118 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.117 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.924 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.902 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8550 ; 0.006 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11635 ; 1.086 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1015 ; 5.955 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1250 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6565 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3686 ; 0.173 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 510 ; 0.078 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.018 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 41 ; 0.191 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 18 ; 0.086 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5085 ; 0.735 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8260 ; 1.321 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3465 ; 2.226 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3375 ; 3.169 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 204 REMARK 3 ORIGIN FOR THE GROUP (A): -10.2482 4.1347 28.2142 REMARK 3 T TENSOR REMARK 3 T11: 0.0627 T22: 0.0788 REMARK 3 T33: 0.2032 T12: 0.0319 REMARK 3 T13: -0.0237 T23: -0.0339 REMARK 3 L TENSOR REMARK 3 L11: 0.5419 L22: 0.3644 REMARK 3 L33: 0.8257 L12: 0.0357 REMARK 3 L13: 0.0964 L23: -0.0016 REMARK 3 S TENSOR REMARK 3 S11: 0.0739 S12: 0.0670 S13: -0.1067 REMARK 3 S21: -0.0115 S22: -0.0085 S23: 0.0983 REMARK 3 S31: 0.0626 S32: -0.0304 S33: -0.0654 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 204 REMARK 3 ORIGIN FOR THE GROUP (A): 9.0241 1.3804 -2.9380 REMARK 3 T TENSOR REMARK 3 T11: 0.1610 T22: 0.1891 REMARK 3 T33: 0.1666 T12: 0.0660 REMARK 3 T13: -0.0580 T23: -0.0923 REMARK 3 L TENSOR REMARK 3 L11: 1.1694 L22: 0.3857 REMARK 3 L33: 0.4056 L12: -0.0665 REMARK 3 L13: -0.1344 L23: 0.0617 REMARK 3 S TENSOR REMARK 3 S11: 0.0519 S12: 0.1996 S13: -0.1360 REMARK 3 S21: -0.0761 S22: -0.0385 S23: 0.1379 REMARK 3 S31: -0.0113 S32: -0.1053 S33: -0.0134 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 204 REMARK 3 ORIGIN FOR THE GROUP (A): 44.4618 -3.5959 5.8220 REMARK 3 T TENSOR REMARK 3 T11: 0.1246 T22: 0.0849 REMARK 3 T33: 0.0238 T12: 0.0285 REMARK 3 T13: 0.0181 T23: -0.0366 REMARK 3 L TENSOR REMARK 3 L11: 0.6265 L22: 0.6472 REMARK 3 L33: 0.8837 L12: -0.0930 REMARK 3 L13: 0.3045 L23: -0.0408 REMARK 3 S TENSOR REMARK 3 S11: 0.0082 S12: 0.0982 S13: -0.0670 REMARK 3 S21: -0.1242 S22: -0.0676 S23: 0.0275 REMARK 3 S31: -0.0270 S32: -0.0063 S33: 0.0594 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 204 REMARK 3 ORIGIN FOR THE GROUP (A): 47.2559 -3.6570 42.5835 REMARK 3 T TENSOR REMARK 3 T11: 0.0547 T22: 0.0527 REMARK 3 T33: 0.0384 T12: -0.0044 REMARK 3 T13: 0.0064 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.4925 L22: 0.5909 REMARK 3 L33: 0.8961 L12: -0.0063 REMARK 3 L13: -0.2061 L23: 0.0235 REMARK 3 S TENSOR REMARK 3 S11: 0.0226 S12: -0.0072 S13: -0.0040 REMARK 3 S21: -0.0134 S22: -0.0245 S23: -0.0415 REMARK 3 S31: 0.0234 S32: 0.0344 S33: 0.0019 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 204 REMARK 3 ORIGIN FOR THE GROUP (A): 13.3532 1.4932 56.3981 REMARK 3 T TENSOR REMARK 3 T11: 0.0760 T22: 0.0589 REMARK 3 T33: 0.1090 T12: -0.0269 REMARK 3 T13: 0.0480 T23: -0.0326 REMARK 3 L TENSOR REMARK 3 L11: 1.3938 L22: 0.4241 REMARK 3 L33: 0.4522 L12: -0.1059 REMARK 3 L13: -0.0122 L23: -0.0450 REMARK 3 S TENSOR REMARK 3 S11: 0.0969 S12: -0.1283 S13: 0.0427 REMARK 3 S21: 0.0600 S22: -0.0137 S23: 0.1160 REMARK 3 S31: -0.0166 S32: 0.0090 S33: -0.0832 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2A3Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUN-05. REMARK 100 THE DEPOSITION ID IS D_1000033457. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.115872 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : DOUBLE CRYSTAL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 84221 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : 2.200 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : 0.04700 REMARK 200 FOR THE DATA SET : 17.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.17200 REMARK 200 R SYM FOR SHELL (I) : 0.17200 REMARK 200 FOR SHELL : 6.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1LGN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACTETATE, CALCIUM ACETATE, PEG REMARK 280 8000, PEG 400, PH 5.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.97800 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -139.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU D 157 CA - CB - CG ANGL. DEV. = 15.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 77 -19.12 78.90 REMARK 500 ARG B 77 -18.06 75.49 REMARK 500 ALA B 187 66.53 -159.30 REMARK 500 ARG C 77 -15.27 72.06 REMARK 500 ALA C 187 63.23 -154.41 REMARK 500 ARG D 77 -25.83 81.45 REMARK 500 ALA D 187 60.44 -152.13 REMARK 500 ARG E 77 -5.95 72.33 REMARK 500 ALA E 187 64.12 -156.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 CPJ A 610 REMARK 610 CPJ B 611 REMARK 610 CPJ C 612 REMARK 610 CPJ D 614 REMARK 610 CPJ E 613 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 600 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 58 OD1 REMARK 620 2 ASP A 58 OD2 49.2 REMARK 620 3 ASN A 59 OD1 78.9 73.0 REMARK 620 4 GLU A 136 OE1 148.7 158.1 116.2 REMARK 620 5 GLU A 136 OE2 120.2 143.5 70.5 50.9 REMARK 620 6 GLN A 137 O 73.1 120.1 114.6 75.6 75.1 REMARK 620 7 ASP A 138 OD1 100.5 93.4 162.8 73.1 122.8 81.2 REMARK 620 8 CPJ A 610 O9 127.0 78.5 78.3 84.1 95.5 159.2 88.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 136 OE1 REMARK 620 2 ASP A 138 OD1 73.3 REMARK 620 3 ASP A 138 OD2 121.3 51.8 REMARK 620 4 GLN A 148 OE1 89.6 162.9 143.7 REMARK 620 5 CPJ A 610 O8 77.5 92.0 118.8 83.9 REMARK 620 6 HOH A 687 O 90.5 93.1 75.1 87.1 165.0 REMARK 620 7 HOH A 688 O 159.4 122.3 78.5 74.3 88.0 101.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 58 OD1 REMARK 620 2 ASP B 58 OD2 48.5 REMARK 620 3 ASN B 59 OD1 79.5 77.1 REMARK 620 4 GLU B 136 OE1 142.7 151.0 126.0 REMARK 620 5 GLU B 136 OE2 124.3 157.5 80.6 50.0 REMARK 620 6 GLN B 137 O 71.0 115.1 116.9 72.9 73.0 REMARK 620 7 ASP B 138 OD1 99.2 86.8 159.6 66.3 115.6 81.2 REMARK 620 8 CPJ B 611 O9 130.0 81.9 83.5 83.6 98.3 155.1 81.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 603 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 136 OE1 REMARK 620 2 ASP B 138 OD1 74.9 REMARK 620 3 ASP B 138 OD2 121.9 51.6 REMARK 620 4 GLN B 148 OE1 92.4 164.5 143.4 REMARK 620 5 CPJ B 611 O8 86.6 86.6 108.5 83.8 REMARK 620 6 HOH B 656 O 167.5 115.0 70.2 76.5 86.5 REMARK 620 7 HOH B 657 O 92.0 96.4 75.2 92.8 176.2 94.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 604 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 58 OD1 REMARK 620 2 ASP C 58 OD2 51.4 REMARK 620 3 ASN C 59 OD1 84.2 78.0 REMARK 620 4 GLU C 136 OE1 147.1 148.7 119.7 REMARK 620 5 GLU C 136 OE2 125.9 153.6 75.7 51.0 REMARK 620 6 GLN C 137 O 72.0 120.1 117.6 76.7 74.2 REMARK 620 7 ASP C 138 OD1 94.1 85.1 159.6 71.1 120.4 80.8 REMARK 620 8 CPJ C 612 O9 133.0 81.9 80.9 76.5 92.9 152.6 85.6 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 605 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 136 OE1 REMARK 620 2 ASP C 138 OD1 74.7 REMARK 620 3 ASP C 138 OD2 121.5 50.8 REMARK 620 4 GLN C 148 OE1 86.9 161.2 147.4 REMARK 620 5 CPJ C 612 O8 77.8 92.6 119.2 79.8 REMARK 620 6 HOH C 709 O 160.5 118.3 76.5 78.7 86.7 REMARK 620 7 HOH C 710 O 92.5 92.4 72.6 91.9 167.5 100.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 606 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 58 OD1 REMARK 620 2 ASP D 58 OD2 49.6 REMARK 620 3 ASN D 59 OD1 77.7 78.8 REMARK 620 4 GLU D 136 OE1 151.1 152.5 116.7 REMARK 620 5 GLU D 136 OE2 118.8 148.9 70.2 53.1 REMARK 620 6 GLN D 137 O 71.5 116.6 113.0 79.7 75.3 REMARK 620 7 ASP D 138 OD1 101.9 86.9 161.5 72.3 123.8 83.8 REMARK 620 8 CPJ D 614 O9 130.4 82.0 83.4 77.9 96.2 156.6 83.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 607 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 136 OE1 REMARK 620 2 ASP D 138 OD1 72.9 REMARK 620 3 ASP D 138 OD2 121.2 52.2 REMARK 620 4 GLN D 148 OE1 88.3 161.1 145.5 REMARK 620 5 CPJ D 614 O8 82.9 92.5 115.4 83.3 REMARK 620 6 HOH D 752 O 159.1 122.5 78.7 75.4 82.3 REMARK 620 7 HOH D 753 O 90.4 94.2 75.9 87.4 168.7 101.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA E 608 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP E 58 OD1 REMARK 620 2 ASP E 58 OD2 53.4 REMARK 620 3 ASN E 59 OD1 79.0 80.1 REMARK 620 4 GLU E 136 OE1 149.9 150.1 115.9 REMARK 620 5 GLU E 136 OE2 120.6 150.5 70.5 51.1 REMARK 620 6 GLN E 137 O 73.1 121.0 115.0 76.8 75.6 REMARK 620 7 ASP E 138 OD1 102.6 85.7 161.0 72.0 122.2 83.2 REMARK 620 8 CPJ E 613 O9 131.9 79.9 82.7 77.6 93.6 153.5 82.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA E 609 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU E 136 OE1 REMARK 620 2 ASP E 138 OD1 75.5 REMARK 620 3 ASP E 138 OD2 121.9 52.1 REMARK 620 4 GLN E 148 OE1 85.9 161.4 144.1 REMARK 620 5 CPJ E 613 O8 82.7 93.1 119.2 83.9 REMARK 620 6 HOH E 707 O 89.4 93.4 72.5 86.7 168.2 REMARK 620 7 HOH E 708 O 159.8 117.6 77.1 80.2 81.3 104.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA D 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA D 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA E 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA E 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CPJ A 610 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CPJ B 611 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CPJ C 612 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CPJ E 613 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CPJ D 614 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1LGN RELATED DB: PDB REMARK 900 DECAMERIC DAMP COMPLEX OF HUMAN SERUM AMYLOID P COMPONENT DBREF 2A3Y A 1 204 UNP P02743 SAMP_HUMAN 20 223 DBREF 2A3Y B 1 204 UNP P02743 SAMP_HUMAN 20 223 DBREF 2A3Y C 1 204 UNP P02743 SAMP_HUMAN 20 223 DBREF 2A3Y D 1 204 UNP P02743 SAMP_HUMAN 20 223 DBREF 2A3Y E 1 204 UNP P02743 SAMP_HUMAN 20 223 SEQRES 1 A 204 HIS THR ASP LEU SER GLY LYS VAL PHE VAL PHE PRO ARG SEQRES 2 A 204 GLU SER VAL THR ASP HIS VAL ASN LEU ILE THR PRO LEU SEQRES 3 A 204 GLU LYS PRO LEU GLN ASN PHE THR LEU CYS PHE ARG ALA SEQRES 4 A 204 TYR SER ASP LEU SER ARG ALA TYR SER LEU PHE SER TYR SEQRES 5 A 204 ASN THR GLN GLY ARG ASP ASN GLU LEU LEU VAL TYR LYS SEQRES 6 A 204 GLU ARG VAL GLY GLU TYR SER LEU TYR ILE GLY ARG HIS SEQRES 7 A 204 LYS VAL THR SER LYS VAL ILE GLU LYS PHE PRO ALA PRO SEQRES 8 A 204 VAL HIS ILE CYS VAL SER TRP GLU SER SER SER GLY ILE SEQRES 9 A 204 ALA GLU PHE TRP ILE ASN GLY THR PRO LEU VAL LYS LYS SEQRES 10 A 204 GLY LEU ARG GLN GLY TYR PHE VAL GLU ALA GLN PRO LYS SEQRES 11 A 204 ILE VAL LEU GLY GLN GLU GLN ASP SER TYR GLY GLY LYS SEQRES 12 A 204 PHE ASP ARG SER GLN SER PHE VAL GLY GLU ILE GLY ASP SEQRES 13 A 204 LEU TYR MET TRP ASP SER VAL LEU PRO PRO GLU ASN ILE SEQRES 14 A 204 LEU SER ALA TYR GLN GLY THR PRO LEU PRO ALA ASN ILE SEQRES 15 A 204 LEU ASP TRP GLN ALA LEU ASN TYR GLU ILE ARG GLY TYR SEQRES 16 A 204 VAL ILE ILE LYS PRO LEU VAL TRP VAL SEQRES 1 B 204 HIS THR ASP LEU SER GLY LYS VAL PHE VAL PHE PRO ARG SEQRES 2 B 204 GLU SER VAL THR ASP HIS VAL ASN LEU ILE THR PRO LEU SEQRES 3 B 204 GLU LYS PRO LEU GLN ASN PHE THR LEU CYS PHE ARG ALA SEQRES 4 B 204 TYR SER ASP LEU SER ARG ALA TYR SER LEU PHE SER TYR SEQRES 5 B 204 ASN THR GLN GLY ARG ASP ASN GLU LEU LEU VAL TYR LYS SEQRES 6 B 204 GLU ARG VAL GLY GLU TYR SER LEU TYR ILE GLY ARG HIS SEQRES 7 B 204 LYS VAL THR SER LYS VAL ILE GLU LYS PHE PRO ALA PRO SEQRES 8 B 204 VAL HIS ILE CYS VAL SER TRP GLU SER SER SER GLY ILE SEQRES 9 B 204 ALA GLU PHE TRP ILE ASN GLY THR PRO LEU VAL LYS LYS SEQRES 10 B 204 GLY LEU ARG GLN GLY TYR PHE VAL GLU ALA GLN PRO LYS SEQRES 11 B 204 ILE VAL LEU GLY GLN GLU GLN ASP SER TYR GLY GLY LYS SEQRES 12 B 204 PHE ASP ARG SER GLN SER PHE VAL GLY GLU ILE GLY ASP SEQRES 13 B 204 LEU TYR MET TRP ASP SER VAL LEU PRO PRO GLU ASN ILE SEQRES 14 B 204 LEU SER ALA TYR GLN GLY THR PRO LEU PRO ALA ASN ILE SEQRES 15 B 204 LEU ASP TRP GLN ALA LEU ASN TYR GLU ILE ARG GLY TYR SEQRES 16 B 204 VAL ILE ILE LYS PRO LEU VAL TRP VAL SEQRES 1 C 204 HIS THR ASP LEU SER GLY LYS VAL PHE VAL PHE PRO ARG SEQRES 2 C 204 GLU SER VAL THR ASP HIS VAL ASN LEU ILE THR PRO LEU SEQRES 3 C 204 GLU LYS PRO LEU GLN ASN PHE THR LEU CYS PHE ARG ALA SEQRES 4 C 204 TYR SER ASP LEU SER ARG ALA TYR SER LEU PHE SER TYR SEQRES 5 C 204 ASN THR GLN GLY ARG ASP ASN GLU LEU LEU VAL TYR LYS SEQRES 6 C 204 GLU ARG VAL GLY GLU TYR SER LEU TYR ILE GLY ARG HIS SEQRES 7 C 204 LYS VAL THR SER LYS VAL ILE GLU LYS PHE PRO ALA PRO SEQRES 8 C 204 VAL HIS ILE CYS VAL SER TRP GLU SER SER SER GLY ILE SEQRES 9 C 204 ALA GLU PHE TRP ILE ASN GLY THR PRO LEU VAL LYS LYS SEQRES 10 C 204 GLY LEU ARG GLN GLY TYR PHE VAL GLU ALA GLN PRO LYS SEQRES 11 C 204 ILE VAL LEU GLY GLN GLU GLN ASP SER TYR GLY GLY LYS SEQRES 12 C 204 PHE ASP ARG SER GLN SER PHE VAL GLY GLU ILE GLY ASP SEQRES 13 C 204 LEU TYR MET TRP ASP SER VAL LEU PRO PRO GLU ASN ILE SEQRES 14 C 204 LEU SER ALA TYR GLN GLY THR PRO LEU PRO ALA ASN ILE SEQRES 15 C 204 LEU ASP TRP GLN ALA LEU ASN TYR GLU ILE ARG GLY TYR SEQRES 16 C 204 VAL ILE ILE LYS PRO LEU VAL TRP VAL SEQRES 1 D 204 HIS THR ASP LEU SER GLY LYS VAL PHE VAL PHE PRO ARG SEQRES 2 D 204 GLU SER VAL THR ASP HIS VAL ASN LEU ILE THR PRO LEU SEQRES 3 D 204 GLU LYS PRO LEU GLN ASN PHE THR LEU CYS PHE ARG ALA SEQRES 4 D 204 TYR SER ASP LEU SER ARG ALA TYR SER LEU PHE SER TYR SEQRES 5 D 204 ASN THR GLN GLY ARG ASP ASN GLU LEU LEU VAL TYR LYS SEQRES 6 D 204 GLU ARG VAL GLY GLU TYR SER LEU TYR ILE GLY ARG HIS SEQRES 7 D 204 LYS VAL THR SER LYS VAL ILE GLU LYS PHE PRO ALA PRO SEQRES 8 D 204 VAL HIS ILE CYS VAL SER TRP GLU SER SER SER GLY ILE SEQRES 9 D 204 ALA GLU PHE TRP ILE ASN GLY THR PRO LEU VAL LYS LYS SEQRES 10 D 204 GLY LEU ARG GLN GLY TYR PHE VAL GLU ALA GLN PRO LYS SEQRES 11 D 204 ILE VAL LEU GLY GLN GLU GLN ASP SER TYR GLY GLY LYS SEQRES 12 D 204 PHE ASP ARG SER GLN SER PHE VAL GLY GLU ILE GLY ASP SEQRES 13 D 204 LEU TYR MET TRP ASP SER VAL LEU PRO PRO GLU ASN ILE SEQRES 14 D 204 LEU SER ALA TYR GLN GLY THR PRO LEU PRO ALA ASN ILE SEQRES 15 D 204 LEU ASP TRP GLN ALA LEU ASN TYR GLU ILE ARG GLY TYR SEQRES 16 D 204 VAL ILE ILE LYS PRO LEU VAL TRP VAL SEQRES 1 E 204 HIS THR ASP LEU SER GLY LYS VAL PHE VAL PHE PRO ARG SEQRES 2 E 204 GLU SER VAL THR ASP HIS VAL ASN LEU ILE THR PRO LEU SEQRES 3 E 204 GLU LYS PRO LEU GLN ASN PHE THR LEU CYS PHE ARG ALA SEQRES 4 E 204 TYR SER ASP LEU SER ARG ALA TYR SER LEU PHE SER TYR SEQRES 5 E 204 ASN THR GLN GLY ARG ASP ASN GLU LEU LEU VAL TYR LYS SEQRES 6 E 204 GLU ARG VAL GLY GLU TYR SER LEU TYR ILE GLY ARG HIS SEQRES 7 E 204 LYS VAL THR SER LYS VAL ILE GLU LYS PHE PRO ALA PRO SEQRES 8 E 204 VAL HIS ILE CYS VAL SER TRP GLU SER SER SER GLY ILE SEQRES 9 E 204 ALA GLU PHE TRP ILE ASN GLY THR PRO LEU VAL LYS LYS SEQRES 10 E 204 GLY LEU ARG GLN GLY TYR PHE VAL GLU ALA GLN PRO LYS SEQRES 11 E 204 ILE VAL LEU GLY GLN GLU GLN ASP SER TYR GLY GLY LYS SEQRES 12 E 204 PHE ASP ARG SER GLN SER PHE VAL GLY GLU ILE GLY ASP SEQRES 13 E 204 LEU TYR MET TRP ASP SER VAL LEU PRO PRO GLU ASN ILE SEQRES 14 E 204 LEU SER ALA TYR GLN GLY THR PRO LEU PRO ALA ASN ILE SEQRES 15 E 204 LEU ASP TRP GLN ALA LEU ASN TYR GLU ILE ARG GLY TYR SEQRES 16 E 204 VAL ILE ILE LYS PRO LEU VAL TRP VAL HET CA A 600 1 HET CA A 601 1 HET CPJ A 610 13 HET CA B 602 1 HET CA B 603 1 HET CPJ B 611 13 HET CA C 604 1 HET CA C 605 1 HET CPJ C 612 13 HET CA D 606 1 HET CA D 607 1 HET CPJ D 614 13 HET CA E 608 1 HET CA E 609 1 HET CPJ E 613 13 HETNAM CA CALCIUM ION HETNAM CPJ BIS-1,2-{[(Z)-2-CARBOXY-2-METHYL-1,3-DIOXANE]-5- HETNAM 2 CPJ YLOXYCARBAMOYL}-ETHANE FORMUL 6 CA 10(CA 2+) FORMUL 8 CPJ 5(C16 H24 N2 O12) FORMUL 21 HOH *478(H2 O) HELIX 1 1 ASP A 145 SER A 149 5 5 HELIX 2 2 PRO A 165 GLY A 175 1 11 HELIX 3 3 ASP B 145 SER B 149 5 5 HELIX 4 4 PRO B 165 GLN B 174 1 10 HELIX 5 5 ASP C 145 SER C 149 5 5 HELIX 6 6 PRO C 165 GLN C 174 1 10 HELIX 7 7 GLN C 186 LEU C 188 5 3 HELIX 8 8 ASP D 145 SER D 149 5 5 HELIX 9 9 PRO D 165 GLN D 174 1 10 HELIX 10 10 ASP E 145 SER E 149 5 5 HELIX 11 11 PRO E 165 GLY E 175 1 11 SHEET 1 A 6 THR A 112 PRO A 113 0 SHEET 2 A 6 ILE A 104 ILE A 109 -1 N ILE A 109 O THR A 112 SHEET 3 A 6 VAL A 92 GLU A 99 -1 N CYS A 95 O TRP A 108 SHEET 4 A 6 ASN A 32 TYR A 40 -1 N PHE A 37 O ILE A 94 SHEET 5 A 6 GLY A 152 TRP A 160 -1 O GLY A 155 N ARG A 38 SHEET 6 A 6 LEU A 183 ASP A 184 -1 O LEU A 183 N MET A 159 SHEET 1 B 7 LYS A 117 GLY A 118 0 SHEET 2 B 7 ILE A 104 ILE A 109 -1 N ALA A 105 O LYS A 117 SHEET 3 B 7 VAL A 92 GLU A 99 -1 N CYS A 95 O TRP A 108 SHEET 4 B 7 ASN A 32 TYR A 40 -1 N PHE A 37 O ILE A 94 SHEET 5 B 7 GLY A 152 TRP A 160 -1 O GLY A 155 N ARG A 38 SHEET 6 B 7 LYS A 7 PHE A 11 -1 N PHE A 11 O GLY A 152 SHEET 7 B 7 ILE A 197 PRO A 200 -1 O LYS A 199 N VAL A 8 SHEET 1 C 7 HIS A 78 LYS A 83 0 SHEET 2 C 7 GLU A 70 ILE A 75 -1 N TYR A 71 O SER A 82 SHEET 3 C 7 ARG A 57 ARG A 67 -1 N LEU A 62 O TYR A 74 SHEET 4 C 7 TYR A 47 THR A 54 -1 N LEU A 49 O VAL A 63 SHEET 5 C 7 LYS A 130 LEU A 133 -1 O VAL A 132 N SER A 51 SHEET 6 C 7 HIS A 19 ILE A 23 -1 N LEU A 22 O ILE A 131 SHEET 7 C 7 ASN A 189 ARG A 193 -1 O GLU A 191 N ASN A 21 SHEET 1 D 6 THR B 112 PRO B 113 0 SHEET 2 D 6 ILE B 104 ILE B 109 -1 N ILE B 109 O THR B 112 SHEET 3 D 6 VAL B 92 GLU B 99 -1 N CYS B 95 O TRP B 108 SHEET 4 D 6 ASN B 32 TYR B 40 -1 N ALA B 39 O VAL B 92 SHEET 5 D 6 GLY B 152 TRP B 160 -1 O GLY B 155 N ARG B 38 SHEET 6 D 6 LEU B 183 ASP B 184 -1 O LEU B 183 N MET B 159 SHEET 1 E 7 LYS B 117 GLY B 118 0 SHEET 2 E 7 ILE B 104 ILE B 109 -1 N ALA B 105 O LYS B 117 SHEET 3 E 7 VAL B 92 GLU B 99 -1 N CYS B 95 O TRP B 108 SHEET 4 E 7 ASN B 32 TYR B 40 -1 N ALA B 39 O VAL B 92 SHEET 5 E 7 GLY B 152 TRP B 160 -1 O GLY B 155 N ARG B 38 SHEET 6 E 7 LYS B 7 PHE B 11 -1 N PHE B 11 O GLY B 152 SHEET 7 E 7 ILE B 197 PRO B 200 -1 O ILE B 197 N VAL B 10 SHEET 1 F 7 HIS B 78 LYS B 83 0 SHEET 2 F 7 GLU B 70 ILE B 75 -1 N TYR B 71 O SER B 82 SHEET 3 F 7 ARG B 57 ARG B 67 -1 N LEU B 62 O TYR B 74 SHEET 4 F 7 TYR B 47 THR B 54 -1 N TYR B 47 O LYS B 65 SHEET 5 F 7 LYS B 130 LEU B 133 -1 O LYS B 130 N ASN B 53 SHEET 6 F 7 HIS B 19 LEU B 22 -1 N LEU B 22 O ILE B 131 SHEET 7 F 7 TYR B 190 ARG B 193 -1 O GLU B 191 N ASN B 21 SHEET 1 G 6 THR C 112 PRO C 113 0 SHEET 2 G 6 ILE C 104 ILE C 109 -1 N ILE C 109 O THR C 112 SHEET 3 G 6 VAL C 92 GLU C 99 -1 N CYS C 95 O TRP C 108 SHEET 4 G 6 ASN C 32 TYR C 40 -1 N LEU C 35 O VAL C 96 SHEET 5 G 6 GLY C 152 TRP C 160 -1 O GLY C 155 N ARG C 38 SHEET 6 G 6 LEU C 183 ASP C 184 -1 O LEU C 183 N MET C 159 SHEET 1 H 7 LYS C 117 GLY C 118 0 SHEET 2 H 7 ILE C 104 ILE C 109 -1 N ALA C 105 O LYS C 117 SHEET 3 H 7 VAL C 92 GLU C 99 -1 N CYS C 95 O TRP C 108 SHEET 4 H 7 ASN C 32 TYR C 40 -1 N LEU C 35 O VAL C 96 SHEET 5 H 7 GLY C 152 TRP C 160 -1 O GLY C 155 N ARG C 38 SHEET 6 H 7 LYS C 7 PHE C 11 -1 N PHE C 11 O GLY C 152 SHEET 7 H 7 ILE C 197 PRO C 200 -1 O ILE C 197 N VAL C 10 SHEET 1 I 7 HIS C 78 LYS C 83 0 SHEET 2 I 7 GLU C 70 ILE C 75 -1 N TYR C 71 O SER C 82 SHEET 3 I 7 ARG C 57 ARG C 67 -1 N TYR C 64 O SER C 72 SHEET 4 I 7 TYR C 47 THR C 54 -1 N LEU C 49 O VAL C 63 SHEET 5 I 7 LYS C 130 LEU C 133 -1 O VAL C 132 N SER C 51 SHEET 6 I 7 HIS C 19 LEU C 22 -1 N LEU C 22 O ILE C 131 SHEET 7 I 7 TYR C 190 ARG C 193 -1 O ARG C 193 N HIS C 19 SHEET 1 J 6 THR D 112 PRO D 113 0 SHEET 2 J 6 ILE D 104 ILE D 109 -1 N ILE D 109 O THR D 112 SHEET 3 J 6 VAL D 92 GLU D 99 -1 N CYS D 95 O TRP D 108 SHEET 4 J 6 ASN D 32 TYR D 40 -1 N PHE D 37 O ILE D 94 SHEET 5 J 6 GLY D 152 TRP D 160 -1 O TYR D 158 N CYS D 36 SHEET 6 J 6 LEU D 183 ASP D 184 -1 O LEU D 183 N MET D 159 SHEET 1 K 7 LYS D 117 GLY D 118 0 SHEET 2 K 7 ILE D 104 ILE D 109 -1 N ALA D 105 O LYS D 117 SHEET 3 K 7 VAL D 92 GLU D 99 -1 N CYS D 95 O TRP D 108 SHEET 4 K 7 ASN D 32 TYR D 40 -1 N PHE D 37 O ILE D 94 SHEET 5 K 7 GLY D 152 TRP D 160 -1 O TYR D 158 N CYS D 36 SHEET 6 K 7 LYS D 7 PHE D 11 -1 N PHE D 11 O GLY D 152 SHEET 7 K 7 ILE D 197 PRO D 200 -1 O ILE D 197 N VAL D 10 SHEET 1 L 7 HIS D 78 LYS D 83 0 SHEET 2 L 7 GLU D 70 ILE D 75 -1 N TYR D 71 O SER D 82 SHEET 3 L 7 ARG D 57 ARG D 67 -1 N TYR D 64 O SER D 72 SHEET 4 L 7 TYR D 47 THR D 54 -1 N TYR D 47 O LYS D 65 SHEET 5 L 7 LYS D 130 LEU D 133 -1 O LYS D 130 N ASN D 53 SHEET 6 L 7 HIS D 19 LEU D 22 -1 N LEU D 22 O ILE D 131 SHEET 7 L 7 TYR D 190 ARG D 193 -1 O ARG D 193 N HIS D 19 SHEET 1 M 6 THR E 112 PRO E 113 0 SHEET 2 M 6 ILE E 104 ILE E 109 -1 N ILE E 109 O THR E 112 SHEET 3 M 6 VAL E 92 GLU E 99 -1 N CYS E 95 O TRP E 108 SHEET 4 M 6 ASN E 32 TYR E 40 -1 N PHE E 37 O ILE E 94 SHEET 5 M 6 GLY E 152 TRP E 160 -1 O GLY E 155 N ARG E 38 SHEET 6 M 6 LEU E 183 ASP E 184 -1 O LEU E 183 N MET E 159 SHEET 1 N 7 LYS E 117 GLY E 118 0 SHEET 2 N 7 ILE E 104 ILE E 109 -1 N ALA E 105 O LYS E 117 SHEET 3 N 7 VAL E 92 GLU E 99 -1 N CYS E 95 O TRP E 108 SHEET 4 N 7 ASN E 32 TYR E 40 -1 N PHE E 37 O ILE E 94 SHEET 5 N 7 GLY E 152 TRP E 160 -1 O GLY E 155 N ARG E 38 SHEET 6 N 7 LYS E 7 PHE E 11 -1 N PHE E 11 O GLY E 152 SHEET 7 N 7 ILE E 197 PRO E 200 -1 O LYS E 199 N VAL E 8 SHEET 1 O 7 HIS E 78 LYS E 83 0 SHEET 2 O 7 GLU E 70 ILE E 75 -1 N TYR E 71 O SER E 82 SHEET 3 O 7 ARG E 57 ARG E 67 -1 N TYR E 64 O SER E 72 SHEET 4 O 7 TYR E 47 THR E 54 -1 N TYR E 47 O LYS E 65 SHEET 5 O 7 LYS E 130 LEU E 133 -1 O VAL E 132 N SER E 51 SHEET 6 O 7 HIS E 19 ILE E 23 -1 N LEU E 22 O ILE E 131 SHEET 7 O 7 ASN E 189 ARG E 193 -1 O ASN E 189 N ILE E 23 SSBOND 1 CYS A 36 CYS A 95 1555 1555 2.04 SSBOND 2 CYS B 36 CYS B 95 1555 1555 2.04 SSBOND 3 CYS C 36 CYS C 95 1555 1555 2.04 SSBOND 4 CYS D 36 CYS D 95 1555 1555 2.04 SSBOND 5 CYS E 36 CYS E 95 1555 1555 2.03 LINK OD1 ASP A 58 CA CA A 600 1555 1555 2.43 LINK OD2 ASP A 58 CA CA A 600 1555 1555 2.68 LINK OD1 ASN A 59 CA CA A 600 1555 1555 2.42 LINK OE1 GLU A 136 CA CA A 600 1555 1555 2.53 LINK OE2 GLU A 136 CA CA A 600 1555 1555 2.57 LINK OE1 GLU A 136 CA CA A 601 1555 1555 2.39 LINK O GLN A 137 CA CA A 600 1555 1555 2.32 LINK OD1 ASP A 138 CA CA A 600 1555 1555 2.32 LINK OD1 ASP A 138 CA CA A 601 1555 1555 2.46 LINK OD2 ASP A 138 CA CA A 601 1555 1555 2.45 LINK OE1 GLN A 148 CA CA A 601 1555 1555 2.45 LINK CA CA A 600 O9 CPJ A 610 1555 1555 2.87 LINK CA CA A 601 O8 CPJ A 610 1555 1555 2.59 LINK CA CA A 601 O HOH A 687 1555 1555 2.23 LINK CA CA A 601 O HOH A 688 1555 1555 2.41 LINK OD1 ASP B 58 CA CA B 602 1555 1555 2.52 LINK OD2 ASP B 58 CA CA B 602 1555 1555 2.68 LINK OD1 ASN B 59 CA CA B 602 1555 1555 2.28 LINK OE1 GLU B 136 CA CA B 602 1555 1555 2.72 LINK OE2 GLU B 136 CA CA B 602 1555 1555 2.42 LINK OE1 GLU B 136 CA CA B 603 1555 1555 2.06 LINK O GLN B 137 CA CA B 602 1555 1555 2.44 LINK OD1 ASP B 138 CA CA B 602 1555 1555 2.41 LINK OD1 ASP B 138 CA CA B 603 1555 1555 2.53 LINK OD2 ASP B 138 CA CA B 603 1555 1555 2.41 LINK OE1 GLN B 148 CA CA B 603 1555 1555 2.35 LINK CA CA B 602 O9 CPJ B 611 1555 1555 2.73 LINK CA CA B 603 O8 CPJ B 611 1555 1555 2.49 LINK CA CA B 603 O HOH B 656 1555 1555 2.20 LINK CA CA B 603 O HOH B 657 1555 1555 2.26 LINK OD1 ASP C 58 CA CA C 604 1555 1555 2.38 LINK OD2 ASP C 58 CA CA C 604 1555 1555 2.56 LINK OD1 ASN C 59 CA CA C 604 1555 1555 2.26 LINK OE1 GLU C 136 CA CA C 604 1555 1555 2.63 LINK OE2 GLU C 136 CA CA C 604 1555 1555 2.45 LINK OE1 GLU C 136 CA CA C 605 1555 1555 2.28 LINK O GLN C 137 CA CA C 604 1555 1555 2.37 LINK OD1 ASP C 138 CA CA C 604 1555 1555 2.46 LINK OD1 ASP C 138 CA CA C 605 1555 1555 2.59 LINK OD2 ASP C 138 CA CA C 605 1555 1555 2.42 LINK OE1 GLN C 148 CA CA C 605 1555 1555 2.40 LINK CA CA C 604 O9 CPJ C 612 1555 1555 2.60 LINK CA CA C 605 O8 CPJ C 612 1555 1555 2.43 LINK CA CA C 605 O HOH C 709 1555 1555 2.41 LINK CA CA C 605 O HOH C 710 1555 1555 2.24 LINK OD1 ASP D 58 CA CA D 606 1555 1555 2.42 LINK OD2 ASP D 58 CA CA D 606 1555 1555 2.65 LINK OD1 ASN D 59 CA CA D 606 1555 1555 2.38 LINK OE1 GLU D 136 CA CA D 606 1555 1555 2.49 LINK OE2 GLU D 136 CA CA D 606 1555 1555 2.40 LINK OE1 GLU D 136 CA CA D 607 1555 1555 2.31 LINK O GLN D 137 CA CA D 606 1555 1555 2.31 LINK OD1 ASP D 138 CA CA D 606 1555 1555 2.33 LINK OD1 ASP D 138 CA CA D 607 1555 1555 2.48 LINK OD2 ASP D 138 CA CA D 607 1555 1555 2.42 LINK OE1 GLN D 148 CA CA D 607 1555 1555 2.40 LINK CA CA D 606 O9 CPJ D 614 1555 1555 2.49 LINK CA CA D 607 O8 CPJ D 614 1555 1555 2.41 LINK CA CA D 607 O HOH D 752 1555 1555 2.49 LINK CA CA D 607 O HOH D 753 1555 1555 2.30 LINK OD1 ASP E 58 CA CA E 608 1555 1555 2.26 LINK OD2 ASP E 58 CA CA E 608 1555 1555 2.50 LINK OD1 ASN E 59 CA CA E 608 1555 1555 2.25 LINK OE1 GLU E 136 CA CA E 608 1555 1555 2.61 LINK OE2 GLU E 136 CA CA E 608 1555 1555 2.47 LINK OE1 GLU E 136 CA CA E 609 1555 1555 2.37 LINK O GLN E 137 CA CA E 608 1555 1555 2.27 LINK OD1 ASP E 138 CA CA E 608 1555 1555 2.43 LINK OD1 ASP E 138 CA CA E 609 1555 1555 2.47 LINK OD2 ASP E 138 CA CA E 609 1555 1555 2.42 LINK OE1 GLN E 148 CA CA E 609 1555 1555 2.39 LINK CA CA E 608 O9 CPJ E 613 1555 1555 2.73 LINK CA CA E 609 O8 CPJ E 613 1555 1555 2.56 LINK CA CA E 609 O HOH E 707 1555 1555 2.44 LINK CA CA E 609 O HOH E 708 1555 1555 2.21 CISPEP 1 PHE A 88 PRO A 89 0 -6.66 CISPEP 2 PHE B 88 PRO B 89 0 -5.96 CISPEP 3 PHE C 88 PRO C 89 0 -4.97 CISPEP 4 PHE D 88 PRO D 89 0 -6.85 CISPEP 5 PHE E 88 PRO E 89 0 -5.38 SITE 1 AC1 6 ASP A 58 ASN A 59 GLU A 136 GLN A 137 SITE 2 AC1 6 ASP A 138 CPJ A 610 SITE 1 AC2 6 GLU A 136 ASP A 138 GLN A 148 CPJ A 610 SITE 2 AC2 6 HOH A 687 HOH A 688 SITE 1 AC3 6 ASP B 58 ASN B 59 GLU B 136 GLN B 137 SITE 2 AC3 6 ASP B 138 CPJ B 611 SITE 1 AC4 6 GLU B 136 ASP B 138 GLN B 148 CPJ B 611 SITE 2 AC4 6 HOH B 656 HOH B 657 SITE 1 AC5 6 ASP C 58 ASN C 59 GLU C 136 GLN C 137 SITE 2 AC5 6 ASP C 138 CPJ C 612 SITE 1 AC6 6 GLU C 136 ASP C 138 GLN C 148 CPJ C 612 SITE 2 AC6 6 HOH C 709 HOH C 710 SITE 1 AC7 6 ASP D 58 ASN D 59 GLU D 136 GLN D 137 SITE 2 AC7 6 ASP D 138 CPJ D 614 SITE 1 AC8 6 GLU D 136 ASP D 138 GLN D 148 CPJ D 614 SITE 2 AC8 6 HOH D 752 HOH D 753 SITE 1 AC9 6 ASP E 58 ASN E 59 GLU E 136 GLN E 137 SITE 2 AC9 6 ASP E 138 CPJ E 613 SITE 1 BC1 6 GLU E 136 ASP E 138 GLN E 148 CPJ E 613 SITE 2 BC1 6 HOH E 707 HOH E 708 SITE 1 BC2 7 ASP A 58 ASN A 59 GLU A 136 ASP A 138 SITE 2 BC2 7 GLN A 148 CA A 600 CA A 601 SITE 1 BC3 8 ASP B 58 ASN B 59 TYR B 74 GLU B 136 SITE 2 BC3 8 ASP B 138 GLN B 148 CA B 602 CA B 603 SITE 1 BC4 7 ASP C 58 ASN C 59 GLU C 136 ASP C 138 SITE 2 BC4 7 GLN C 148 CA C 604 CA C 605 SITE 1 BC5 8 ASP E 58 ASN E 59 TYR E 64 GLU E 136 SITE 2 BC5 8 ASP E 138 GLN E 148 CA E 608 CA E 609 SITE 1 BC6 8 ASP D 58 ASN D 59 GLU D 136 ASP D 138 SITE 2 BC6 8 GLN D 148 CA D 606 CA D 607 HOH D 756 CRYST1 94.715 69.956 101.367 90.00 97.09 90.00 P 1 21 1 10 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010558 0.000000 0.001313 0.00000 SCALE2 0.000000 0.014295 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009941 0.00000