data_2A43 # _entry.id 2A43 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2A43 pdb_00002a43 10.2210/pdb2a43/pdb NDB UR0066 ? ? RCSB RCSB033462 ? ? WWPDB D_1000033462 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2A43 _pdbx_database_status.recvd_initial_deposition_date 2005-06-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pallan, P.S.' 1 'Marshall, W.S.' 2 'Harp, J.' 3 'Jewett III, F.C.' 4 'Wawrzak, Z.' 5 'Brown II, B.A.' 6 'Rich, A.' 7 'Egli, M.' 8 # _citation.id primary _citation.title 'Crystal Structure of a Luteoviral RNA Pseudoknot and Model for a Minimal Ribosomal Frameshifting Motif' _citation.journal_abbrev Biochemistry _citation.journal_volume 44 _citation.page_first 11315 _citation.page_last 11322 _citation.year 2005 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16114868 _citation.pdbx_database_id_DOI 10.1021/bi051061i # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pallan, P.S.' 1 ? primary 'Marshall, W.S.' 2 ? primary 'Harp, J.' 3 ? primary 'Jewett III, F.C.' 4 ? primary 'Wawrzak, Z.' 5 ? primary 'Brown II, B.A.' 6 ? primary 'Rich, A.' 7 ? primary 'Egli, M.' 8 ? # _cell.entry_id 2A43 _cell.length_a 53.250 _cell.length_b 53.250 _cell.length_c 55.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2A43 _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA Pseudoknot' 8340.073 1 ? 'C17U, A18C' ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 3 water nat water 18.015 201 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GCGGCACCGUCCGCUCAAACAAACGG _entity_poly.pdbx_seq_one_letter_code_can GCGGCACCGUCCGCUCAAACAAACGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 C n 1 3 G n 1 4 G n 1 5 C n 1 6 A n 1 7 C n 1 8 C n 1 9 G n 1 10 U n 1 11 C n 1 12 C n 1 13 G n 1 14 C n 1 15 U n 1 16 C n 1 17 A n 1 18 A n 1 19 A n 1 20 C n 1 21 A n 1 22 A n 1 23 A n 1 24 C n 1 25 G n 1 26 G n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Chemically synthesized oligonucleotide (RNA). This sequence is a mutated form of that naturally found in Potato leafroll virus' # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code AY138970 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code GCGGCACCGUCCGCCAAAACAAACGG _struct_ref.pdbx_align_begin 1676 _struct_ref.pdbx_db_accession 23953793 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2A43 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 26 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 23953793 _struct_ref_seq.db_align_beg 1676 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1701 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 3 _struct_ref_seq.pdbx_auth_seq_align_end 28 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2A43 U A 15 ? GB 23953793 C 1690 'engineered mutation' 17 1 1 2A43 C A 16 ? GB 23953793 A 1691 'engineered mutation' 18 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.entry_id 2A43 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.8 _exptl_crystal.density_percent_sol 55 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'PEG 8000, Magnesium Acetate, Sodium Cacodylate, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 291.0K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 110.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2003-11-24 _diffrn_detector.details 'Horizontally focusing mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91980 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 5ID-B' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 5ID-B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.91980 # _reflns.entry_id 2A43 _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 1.34 _reflns.d_resolution_low 23.6 _reflns.number_all ? _reflns.number_obs 19756 _reflns.percent_possible_obs 96.0 _reflns.pdbx_Rmerge_I_obs 0.064 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 24.58 _reflns.B_iso_Wilson_estimate 21.8 _reflns.pdbx_redundancy 14.6 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.34 _reflns_shell.d_res_low 1.40 _reflns_shell.percent_possible_all 84.9 _reflns_shell.Rmerge_I_obs 0.497 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.97 _reflns_shell.pdbx_redundancy 7.64 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1748 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2A43 _refine.ls_d_res_high 1.34 _refine.ls_d_res_low 23.6 _refine.pdbx_ls_sigma_F 4 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 18322 _refine.ls_number_reflns_R_free ? _refine.ls_percent_reflns_obs 89.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.114 _refine.ls_R_factor_R_free ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB Entry 437D' _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details Random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'G. Parkinson et. al., Acta Cryst. (1996) D52, 57-64.' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ;The waters 603, 686, 211, 584, 610, 666, 608 and 638 have partial occupancies. Thus close contacts between them should be ignored. ; _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 552 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 201 _refine_hist.number_atoms_total 755 _refine_hist.d_res_high 1.34 _refine_hist.d_res_low 23.6 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.022 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.041 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 2A43 _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff 0.114 _pdbx_refine.free_R_factor_4sig_cutoff 0.19 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 905 _pdbx_refine.number_reflns_obs_4sig_cutoff 18322 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 2A43 _struct.title 'Crystal Structure of a Luteoviral RNA Pseudoknot and Model for a Minimal Ribosomal Frameshifting Motif' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2A43 _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'PLRV, potato leaf roll virus; BWYV, beet western yellow virus, pk, pseudoknot, RNA., RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details 'One RNA pseudoknot per asymmetric unit' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 4 O6 ? ? ? 1_555 B MG . MG ? ? A G 6 A MG 201 1_555 ? ? ? ? ? ? ? 2.368 ? ? metalc2 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 201 A HOH 202 1_555 ? ? ? ? ? ? ? 2.128 ? ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 201 A HOH 203 1_555 ? ? ? ? ? ? ? 2.269 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 201 A HOH 204 1_555 ? ? ? ? ? ? ? 2.088 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 201 A HOH 205 1_555 ? ? ? ? ? ? ? 2.302 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 201 A HOH 206 1_555 ? ? ? ? ? ? ? 2.241 ? ? metalc7 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 207 A HOH 208 1_555 ? ? ? ? ? ? ? 2.101 ? ? metalc8 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 207 A HOH 209 1_555 ? ? ? ? ? ? ? 2.094 ? ? metalc9 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 207 A HOH 210 1_555 ? ? ? ? ? ? ? 2.160 ? ? metalc10 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 207 A HOH 211 1_555 ? ? ? ? ? ? ? 2.098 ? ? metalc11 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 207 A HOH 212 1_555 ? ? ? ? ? ? ? 2.189 ? ? metalc12 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 207 A HOH 213 1_555 ? ? ? ? ? ? ? 2.177 ? ? metalc13 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 207 A HOH 584 1_555 ? ? ? ? ? ? ? 3.124 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 14 N3 ? ? A G 3 A C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 14 O2 ? ? A G 3 A C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 14 N4 ? ? A G 3 A C 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 1 N2 ? ? ? 1_555 A A 18 N3 ? ? A G 3 A A 20 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog5 hydrog ? ? A C 2 N3 ? ? ? 1_555 A G 13 N1 ? ? A C 4 A G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 2 N4 ? ? ? 1_555 A G 13 O6 ? ? A C 4 A G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 2 O2 ? ? ? 1_555 A G 13 N2 ? ? A C 4 A G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 3 N1 ? ? ? 1_555 A C 12 N3 ? ? A G 5 A C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 3 N2 ? ? ? 1_555 A C 12 O2 ? ? A G 5 A C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 3 O6 ? ? ? 1_555 A C 12 N4 ? ? A G 5 A C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 11 N3 ? ? A G 6 A C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 11 O2 ? ? A G 6 A C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 11 N4 ? ? A G 6 A C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 4 N2 ? ? ? 1_555 A A 22 N1 ? ? A G 6 A A 24 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog15 hydrog ? ? A G 4 N3 ? ? ? 1_555 A A 22 N6 ? ? A G 6 A A 24 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog16 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 9 N7 ? ? A C 7 A G 11 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog17 hydrog ? ? A C 5 O2 ? ? ? 1_555 A C 24 N4 ? ? A C 7 A C 26 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog18 hydrog ? ? A C 7 N3 ? ? ? 1_555 A G 26 N1 ? ? A C 9 A G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 7 N4 ? ? ? 1_555 A G 26 O6 ? ? A C 9 A G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 7 O2 ? ? ? 1_555 A G 26 N2 ? ? A C 9 A G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 8 N3 ? ? ? 1_555 A G 25 N1 ? ? A C 10 A G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 8 N4 ? ? ? 1_555 A G 25 O6 ? ? A C 10 A G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A C 8 O2 ? ? ? 1_555 A G 25 N2 ? ? A C 10 A G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 9 N1 ? ? ? 1_555 A C 24 N3 ? ? A G 11 A C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 9 N2 ? ? ? 1_555 A C 24 O2 ? ? A G 11 A C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 9 O6 ? ? ? 1_555 A C 24 N4 ? ? A G 11 A C 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 11 O2 ? ? ? 1_555 A A 23 N6 ? ? A C 13 A A 25 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog28 hydrog ? ? A C 12 O2 ? ? ? 1_555 A A 21 N6 ? ? A C 14 A A 23 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 201 ? 6 'BINDING SITE FOR RESIDUE MG A 201' AC2 Software A MG 207 ? 6 'BINDING SITE FOR RESIDUE MG A 207' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 G A 4 ? G A 6 . ? 1_555 ? 2 AC1 6 HOH D . ? HOH A 202 . ? 1_555 ? 3 AC1 6 HOH D . ? HOH A 203 . ? 1_555 ? 4 AC1 6 HOH D . ? HOH A 204 . ? 1_555 ? 5 AC1 6 HOH D . ? HOH A 205 . ? 1_555 ? 6 AC1 6 HOH D . ? HOH A 206 . ? 1_555 ? 7 AC2 6 HOH D . ? HOH A 208 . ? 1_555 ? 8 AC2 6 HOH D . ? HOH A 209 . ? 1_555 ? 9 AC2 6 HOH D . ? HOH A 210 . ? 1_555 ? 10 AC2 6 HOH D . ? HOH A 211 . ? 1_555 ? 11 AC2 6 HOH D . ? HOH A 212 . ? 1_555 ? 12 AC2 6 HOH D . ? HOH A 213 . ? 1_555 ? # _database_PDB_matrix.entry_id 2A43 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2A43 _atom_sites.fract_transf_matrix[1][1] 0.018779 _atom_sites.fract_transf_matrix[1][2] 0.010842 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021685 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018182 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 3 3 G G A . n A 1 2 C 2 4 4 C C A . n A 1 3 G 3 5 5 G G A . n A 1 4 G 4 6 6 G G A . n A 1 5 C 5 7 7 C C A . n A 1 6 A 6 8 8 A A A . n A 1 7 C 7 9 9 C C A . n A 1 8 C 8 10 10 C C A . n A 1 9 G 9 11 11 G G A . n A 1 10 U 10 12 12 U U A . n A 1 11 C 11 13 13 C C A . n A 1 12 C 12 14 14 C C A . n A 1 13 G 13 15 15 G G A . n A 1 14 C 14 16 16 C C A . n A 1 15 U 15 17 17 U U A . n A 1 16 C 16 18 18 C C A . n A 1 17 A 17 19 19 A A A . n A 1 18 A 18 20 20 A A A . n A 1 19 A 19 21 21 A A A . n A 1 20 C 20 22 22 C C A . n A 1 21 A 21 23 23 A A A . n A 1 22 A 22 24 24 A A A . n A 1 23 A 23 25 25 A A A . n A 1 24 C 24 26 26 C C A . n A 1 25 G 25 27 27 G G A . n A 1 26 G 26 28 28 G G A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 201 201 MG MG A . C 2 MG 1 207 207 MG MG A . D 3 HOH 1 202 202 HOH HOH A . D 3 HOH 2 203 203 HOH HOH A . D 3 HOH 3 204 204 HOH HOH A . D 3 HOH 4 205 205 HOH HOH A . D 3 HOH 5 206 206 HOH HOH A . D 3 HOH 6 208 208 HOH HOH A . D 3 HOH 7 209 209 HOH HOH A . D 3 HOH 8 210 210 HOH HOH A . D 3 HOH 9 211 211 HOH HOH A . D 3 HOH 10 212 212 HOH HOH A . D 3 HOH 11 213 213 HOH HOH A . D 3 HOH 12 501 501 HOH HOH A . D 3 HOH 13 502 502 HOH HOH A . D 3 HOH 14 503 503 HOH HOH A . D 3 HOH 15 504 504 HOH HOH A . D 3 HOH 16 505 505 HOH HOH A . D 3 HOH 17 506 506 HOH HOH A . D 3 HOH 18 507 507 HOH HOH A . D 3 HOH 19 508 508 HOH HOH A . D 3 HOH 20 509 509 HOH HOH A . D 3 HOH 21 510 510 HOH HOH A . D 3 HOH 22 511 511 HOH HOH A . D 3 HOH 23 512 512 HOH HOH A . D 3 HOH 24 513 513 HOH HOH A . D 3 HOH 25 514 514 HOH HOH A . D 3 HOH 26 515 515 HOH HOH A . D 3 HOH 27 516 516 HOH HOH A . D 3 HOH 28 517 517 HOH HOH A . D 3 HOH 29 518 518 HOH HOH A . D 3 HOH 30 519 519 HOH HOH A . D 3 HOH 31 520 520 HOH HOH A . D 3 HOH 32 521 521 HOH HOH A . D 3 HOH 33 522 522 HOH HOH A . D 3 HOH 34 523 523 HOH HOH A . D 3 HOH 35 524 524 HOH HOH A . D 3 HOH 36 525 525 HOH HOH A . D 3 HOH 37 526 526 HOH HOH A . D 3 HOH 38 527 527 HOH HOH A . D 3 HOH 39 528 528 HOH HOH A . D 3 HOH 40 529 529 HOH HOH A . D 3 HOH 41 530 530 HOH HOH A . D 3 HOH 42 531 531 HOH HOH A . D 3 HOH 43 532 532 HOH HOH A . D 3 HOH 44 533 533 HOH HOH A . D 3 HOH 45 534 534 HOH HOH A . D 3 HOH 46 535 535 HOH HOH A . D 3 HOH 47 536 536 HOH HOH A . D 3 HOH 48 537 537 HOH HOH A . D 3 HOH 49 538 538 HOH HOH A . D 3 HOH 50 539 539 HOH HOH A . D 3 HOH 51 540 540 HOH HOH A . D 3 HOH 52 541 541 HOH HOH A . D 3 HOH 53 542 542 HOH HOH A . D 3 HOH 54 543 543 HOH HOH A . D 3 HOH 55 544 544 HOH HOH A . D 3 HOH 56 545 545 HOH HOH A . D 3 HOH 57 546 546 HOH HOH A . D 3 HOH 58 547 547 HOH HOH A . D 3 HOH 59 548 548 HOH HOH A . D 3 HOH 60 549 549 HOH HOH A . D 3 HOH 61 550 550 HOH HOH A . D 3 HOH 62 551 551 HOH HOH A . D 3 HOH 63 552 552 HOH HOH A . D 3 HOH 64 553 553 HOH HOH A . D 3 HOH 65 554 554 HOH HOH A . D 3 HOH 66 555 555 HOH HOH A . D 3 HOH 67 556 556 HOH HOH A . D 3 HOH 68 557 557 HOH HOH A . D 3 HOH 69 558 558 HOH HOH A . D 3 HOH 70 559 559 HOH HOH A . D 3 HOH 71 560 560 HOH HOH A . D 3 HOH 72 561 561 HOH HOH A . D 3 HOH 73 562 562 HOH HOH A . D 3 HOH 74 563 563 HOH HOH A . D 3 HOH 75 564 564 HOH HOH A . D 3 HOH 76 565 565 HOH HOH A . D 3 HOH 77 566 566 HOH HOH A . D 3 HOH 78 567 567 HOH HOH A . D 3 HOH 79 568 568 HOH HOH A . D 3 HOH 80 569 569 HOH HOH A . D 3 HOH 81 570 570 HOH HOH A . D 3 HOH 82 571 571 HOH HOH A . D 3 HOH 83 572 572 HOH HOH A . D 3 HOH 84 573 573 HOH HOH A . D 3 HOH 85 574 574 HOH HOH A . D 3 HOH 86 575 575 HOH HOH A . D 3 HOH 87 576 576 HOH HOH A . D 3 HOH 88 577 577 HOH HOH A . D 3 HOH 89 578 578 HOH HOH A . D 3 HOH 90 579 579 HOH HOH A . D 3 HOH 91 580 580 HOH HOH A . D 3 HOH 92 581 581 HOH HOH A . D 3 HOH 93 582 582 HOH HOH A . D 3 HOH 94 583 583 HOH HOH A . D 3 HOH 95 584 584 HOH HOH A . D 3 HOH 96 585 585 HOH HOH A . D 3 HOH 97 586 586 HOH HOH A . D 3 HOH 98 587 587 HOH HOH A . D 3 HOH 99 588 588 HOH HOH A . D 3 HOH 100 589 589 HOH HOH A . D 3 HOH 101 590 590 HOH HOH A . D 3 HOH 102 591 591 HOH HOH A . D 3 HOH 103 592 592 HOH HOH A . D 3 HOH 104 593 593 HOH HOH A . D 3 HOH 105 594 594 HOH HOH A . D 3 HOH 106 595 595 HOH HOH A . D 3 HOH 107 596 596 HOH HOH A . D 3 HOH 108 597 597 HOH HOH A . D 3 HOH 109 598 598 HOH HOH A . D 3 HOH 110 599 599 HOH HOH A . D 3 HOH 111 600 600 HOH HOH A . D 3 HOH 112 601 601 HOH HOH A . D 3 HOH 113 602 602 HOH HOH A . D 3 HOH 114 603 603 HOH HOH A . D 3 HOH 115 604 604 HOH HOH A . D 3 HOH 116 605 605 HOH HOH A . D 3 HOH 117 606 606 HOH HOH A . D 3 HOH 118 607 607 HOH HOH A . D 3 HOH 119 608 608 HOH HOH A . D 3 HOH 120 609 609 HOH HOH A . D 3 HOH 121 610 610 HOH HOH A . D 3 HOH 122 611 611 HOH HOH A . D 3 HOH 123 612 612 HOH HOH A . D 3 HOH 124 613 613 HOH HOH A . D 3 HOH 125 614 614 HOH HOH A . D 3 HOH 126 615 615 HOH HOH A . D 3 HOH 127 616 616 HOH HOH A . D 3 HOH 128 617 617 HOH HOH A . D 3 HOH 129 618 618 HOH HOH A . D 3 HOH 130 619 619 HOH HOH A . D 3 HOH 131 620 620 HOH HOH A . D 3 HOH 132 621 621 HOH HOH A . D 3 HOH 133 622 622 HOH HOH A . D 3 HOH 134 623 623 HOH HOH A . D 3 HOH 135 624 624 HOH HOH A . D 3 HOH 136 625 625 HOH HOH A . D 3 HOH 137 626 626 HOH HOH A . D 3 HOH 138 627 627 HOH HOH A . D 3 HOH 139 628 628 HOH HOH A . D 3 HOH 140 629 629 HOH HOH A . D 3 HOH 141 630 630 HOH HOH A . D 3 HOH 142 631 631 HOH HOH A . D 3 HOH 143 632 632 HOH HOH A . D 3 HOH 144 633 633 HOH HOH A . D 3 HOH 145 634 634 HOH HOH A . D 3 HOH 146 635 635 HOH HOH A . D 3 HOH 147 636 636 HOH HOH A . D 3 HOH 148 637 637 HOH HOH A . D 3 HOH 149 638 638 HOH HOH A . D 3 HOH 150 639 639 HOH HOH A . D 3 HOH 151 640 640 HOH HOH A . D 3 HOH 152 641 641 HOH HOH A . D 3 HOH 153 642 642 HOH HOH A . D 3 HOH 154 643 643 HOH HOH A . D 3 HOH 155 644 644 HOH HOH A . D 3 HOH 156 645 645 HOH HOH A . D 3 HOH 157 646 646 HOH HOH A . D 3 HOH 158 647 647 HOH HOH A . D 3 HOH 159 648 648 HOH HOH A . D 3 HOH 160 649 649 HOH HOH A . D 3 HOH 161 650 650 HOH HOH A . D 3 HOH 162 651 651 HOH HOH A . D 3 HOH 163 652 652 HOH HOH A . D 3 HOH 164 653 653 HOH HOH A . D 3 HOH 165 654 654 HOH HOH A . D 3 HOH 166 655 655 HOH HOH A . D 3 HOH 167 656 656 HOH HOH A . D 3 HOH 168 657 657 HOH HOH A . D 3 HOH 169 658 658 HOH HOH A . D 3 HOH 170 659 659 HOH HOH A . D 3 HOH 171 660 660 HOH HOH A . D 3 HOH 172 661 661 HOH HOH A . D 3 HOH 173 662 662 HOH HOH A . D 3 HOH 174 663 663 HOH HOH A . D 3 HOH 175 664 664 HOH HOH A . D 3 HOH 176 665 665 HOH HOH A . D 3 HOH 177 666 666 HOH HOH A . D 3 HOH 178 667 667 HOH HOH A . D 3 HOH 179 668 668 HOH HOH A . D 3 HOH 180 669 669 HOH HOH A . D 3 HOH 181 670 670 HOH HOH A . D 3 HOH 182 671 671 HOH HOH A . D 3 HOH 183 672 672 HOH HOH A . D 3 HOH 184 673 673 HOH HOH A . D 3 HOH 185 674 674 HOH HOH A . D 3 HOH 186 675 675 HOH HOH A . D 3 HOH 187 676 676 HOH HOH A . D 3 HOH 188 677 677 HOH HOH A . D 3 HOH 189 678 678 HOH HOH A . D 3 HOH 190 679 679 HOH HOH A . D 3 HOH 191 680 680 HOH HOH A . D 3 HOH 192 681 681 HOH HOH A . D 3 HOH 193 682 682 HOH HOH A . D 3 HOH 194 684 684 HOH HOH A . D 3 HOH 195 685 685 HOH HOH A . D 3 HOH 196 686 686 HOH HOH A . D 3 HOH 197 687 687 HOH HOH A . D 3 HOH 198 688 688 HOH HOH A . D 3 HOH 199 689 689 HOH HOH A . D 3 HOH 200 690 690 HOH HOH A . D 3 HOH 201 691 691 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 514 ? D HOH . 2 1 A HOH 610 ? D HOH . 3 1 A HOH 684 ? D HOH . 4 1 A HOH 686 ? D HOH . 5 1 A HOH 690 ? D HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A G 4 ? A G 6 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? D HOH . ? A HOH 202 ? 1_555 175.1 ? 2 O6 ? A G 4 ? A G 6 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? D HOH . ? A HOH 203 ? 1_555 86.4 ? 3 O ? D HOH . ? A HOH 202 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? D HOH . ? A HOH 203 ? 1_555 91.5 ? 4 O6 ? A G 4 ? A G 6 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? D HOH . ? A HOH 204 ? 1_555 80.0 ? 5 O ? D HOH . ? A HOH 202 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? D HOH . ? A HOH 204 ? 1_555 96.3 ? 6 O ? D HOH . ? A HOH 203 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? D HOH . ? A HOH 204 ? 1_555 105.6 ? 7 O6 ? A G 4 ? A G 6 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? D HOH . ? A HOH 205 ? 1_555 94.1 ? 8 O ? D HOH . ? A HOH 202 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? D HOH . ? A HOH 205 ? 1_555 89.0 ? 9 O ? D HOH . ? A HOH 203 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? D HOH . ? A HOH 205 ? 1_555 166.1 ? 10 O ? D HOH . ? A HOH 204 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? D HOH . ? A HOH 205 ? 1_555 88.1 ? 11 O6 ? A G 4 ? A G 6 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? D HOH . ? A HOH 206 ? 1_555 99.1 ? 12 O ? D HOH . ? A HOH 202 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? D HOH . ? A HOH 206 ? 1_555 85.1 ? 13 O ? D HOH . ? A HOH 203 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? D HOH . ? A HOH 206 ? 1_555 84.3 ? 14 O ? D HOH . ? A HOH 204 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? D HOH . ? A HOH 206 ? 1_555 169.9 ? 15 O ? D HOH . ? A HOH 205 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? D HOH . ? A HOH 206 ? 1_555 81.9 ? 16 O ? D HOH . ? A HOH 208 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 209 ? 1_555 87.8 ? 17 O ? D HOH . ? A HOH 208 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 210 ? 1_555 89.6 ? 18 O ? D HOH . ? A HOH 209 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 210 ? 1_555 92.6 ? 19 O ? D HOH . ? A HOH 208 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 211 ? 1_555 90.8 ? 20 O ? D HOH . ? A HOH 209 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 211 ? 1_555 178.6 ? 21 O ? D HOH . ? A HOH 210 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 211 ? 1_555 87.7 ? 22 O ? D HOH . ? A HOH 208 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 212 ? 1_555 92.6 ? 23 O ? D HOH . ? A HOH 209 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 212 ? 1_555 92.7 ? 24 O ? D HOH . ? A HOH 210 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 212 ? 1_555 174.4 ? 25 O ? D HOH . ? A HOH 211 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 212 ? 1_555 87.1 ? 26 O ? D HOH . ? A HOH 208 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 213 ? 1_555 175.2 ? 27 O ? D HOH . ? A HOH 209 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 213 ? 1_555 89.3 ? 28 O ? D HOH . ? A HOH 210 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 213 ? 1_555 86.8 ? 29 O ? D HOH . ? A HOH 211 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 213 ? 1_555 92.1 ? 30 O ? D HOH . ? A HOH 212 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 213 ? 1_555 91.2 ? 31 O ? D HOH . ? A HOH 208 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 584 ? 1_555 75.7 ? 32 O ? D HOH . ? A HOH 209 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 584 ? 1_555 161.8 ? 33 O ? D HOH . ? A HOH 210 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 584 ? 1_555 94.9 ? 34 O ? D HOH . ? A HOH 211 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 584 ? 1_555 16.8 ? 35 O ? D HOH . ? A HOH 212 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 584 ? 1_555 80.6 ? 36 O ? D HOH . ? A HOH 213 ? 1_555 MG ? C MG . ? A MG 207 ? 1_555 O ? D HOH . ? A HOH 584 ? 1_555 107.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-09-27 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 1 4 2021-10-20 6 'Structure model' 1 5 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Database references' 5 5 'Structure model' 'Derived calculations' 6 6 'Structure model' 'Data collection' 7 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' database_2 3 5 'Structure model' pdbx_struct_conn_angle 4 5 'Structure model' struct_conn 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site 7 6 'Structure model' chem_comp_atom 8 6 'Structure model' chem_comp_bond 9 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.value' 16 5 'Structure model' '_struct_conn.pdbx_dist_value' 17 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 29 5 'Structure model' '_struct_ref_seq_dif.details' 30 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345 'data collection' . ? 1 XDS 'data reduction' . ? 2 MOLREP phasing . ? 3 SHELXL-97 refinement . ? 4 XDS 'data scaling' . ? 5 CCP4 phasing '(MOLREP)' ? 6 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" A G 3 ? ? "C2'" A G 3 ? ? "C1'" A G 3 ? ? 96.50 101.30 -4.80 0.70 N 2 1 C4 A C 4 ? ? C5 A C 4 ? ? C6 A C 4 ? ? 114.36 117.40 -3.04 0.50 N 3 1 "O5'" A C 7 ? ? "C5'" A C 7 ? ? "C4'" A C 7 ? ? 103.98 109.40 -5.42 0.80 N 4 1 N3 A C 7 ? ? C4 A C 7 ? ? C5 A C 7 ? ? 116.16 121.90 -5.74 0.40 N 5 1 C4 A C 7 ? ? C5 A C 7 ? ? C6 A C 7 ? ? 121.96 117.40 4.56 0.50 N 6 1 "C3'" A A 8 ? ? "C2'" A A 8 ? ? "C1'" A A 8 ? ? 96.41 101.30 -4.89 0.70 N 7 1 N1 A A 8 ? ? C2 A A 8 ? ? N3 A A 8 ? ? 132.95 129.30 3.65 0.50 N 8 1 C2 A A 8 ? ? N3 A A 8 ? ? C4 A A 8 ? ? 107.08 110.60 -3.52 0.50 N 9 1 C2 A C 9 ? ? N3 A C 9 ? ? C4 A C 9 ? ? 115.89 119.90 -4.01 0.50 N 10 1 "C3'" A C 14 ? ? "C2'" A C 14 ? ? "C1'" A C 14 ? ? 96.96 101.30 -4.34 0.70 N 11 1 C2 A C 14 ? ? N3 A C 14 ? ? C4 A C 14 ? ? 123.69 119.90 3.79 0.50 N 12 1 N3 A C 14 ? ? C4 A C 14 ? ? C5 A C 14 ? ? 117.57 121.90 -4.33 0.40 N 13 1 C6 A C 16 ? ? N1 A C 16 ? ? C2 A C 16 ? ? 116.75 120.30 -3.55 0.40 N 14 1 N1 A A 20 ? ? C2 A A 20 ? ? N3 A A 20 ? ? 133.72 129.30 4.42 0.50 N 15 1 N1 A A 21 ? ? C2 A A 21 ? ? N3 A A 21 ? ? 132.53 129.30 3.23 0.50 N 16 1 C2 A A 21 ? ? N3 A A 21 ? ? C4 A A 21 ? ? 107.55 110.60 -3.05 0.50 N 17 1 N7 A A 24 ? ? C8 A A 24 ? ? N9 A A 24 ? ? 109.76 113.80 -4.04 0.50 N 18 1 C8 A A 25 ? ? N9 A A 25 ? ? C4 A A 25 ? ? 108.73 105.80 2.93 0.40 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 MG MG MG N N 114 U OP3 O N N 115 U P P N N 116 U OP1 O N N 117 U OP2 O N N 118 U "O5'" O N N 119 U "C5'" C N N 120 U "C4'" C N R 121 U "O4'" O N N 122 U "C3'" C N S 123 U "O3'" O N N 124 U "C2'" C N R 125 U "O2'" O N N 126 U "C1'" C N R 127 U N1 N N N 128 U C2 C N N 129 U O2 O N N 130 U N3 N N N 131 U C4 C N N 132 U O4 O N N 133 U C5 C N N 134 U C6 C N N 135 U HOP3 H N N 136 U HOP2 H N N 137 U "H5'" H N N 138 U "H5''" H N N 139 U "H4'" H N N 140 U "H3'" H N N 141 U "HO3'" H N N 142 U "H2'" H N N 143 U "HO2'" H N N 144 U "H1'" H N N 145 U H3 H N N 146 U H5 H N N 147 U H6 H N N 148 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 U OP3 P sing N N 118 U OP3 HOP3 sing N N 119 U P OP1 doub N N 120 U P OP2 sing N N 121 U P "O5'" sing N N 122 U OP2 HOP2 sing N N 123 U "O5'" "C5'" sing N N 124 U "C5'" "C4'" sing N N 125 U "C5'" "H5'" sing N N 126 U "C5'" "H5''" sing N N 127 U "C4'" "O4'" sing N N 128 U "C4'" "C3'" sing N N 129 U "C4'" "H4'" sing N N 130 U "O4'" "C1'" sing N N 131 U "C3'" "O3'" sing N N 132 U "C3'" "C2'" sing N N 133 U "C3'" "H3'" sing N N 134 U "O3'" "HO3'" sing N N 135 U "C2'" "O2'" sing N N 136 U "C2'" "C1'" sing N N 137 U "C2'" "H2'" sing N N 138 U "O2'" "HO2'" sing N N 139 U "C1'" N1 sing N N 140 U "C1'" "H1'" sing N N 141 U N1 C2 sing N N 142 U N1 C6 sing N N 143 U C2 O2 doub N N 144 U C2 N3 sing N N 145 U N3 C4 sing N N 146 U N3 H3 sing N N 147 U C4 O4 doub N N 148 U C4 C5 sing N N 149 U C5 C6 doub N N 150 U C5 H5 sing N N 151 U C6 H6 sing N N 152 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2A43 'double helix' 2A43 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 14 1_555 -0.178 -0.114 0.120 -4.504 -22.234 2.112 1 A_G3:C16_A A 3 ? A 16 ? 19 1 1 A C 2 1_555 A G 13 1_555 0.109 -0.163 0.136 0.966 -14.210 -1.385 2 A_C4:G15_A A 4 ? A 15 ? 19 1 1 A G 3 1_555 A C 12 1_555 -0.077 -0.203 0.060 -7.792 -14.756 -2.397 3 A_G5:C14_A A 5 ? A 14 ? 19 1 1 A G 4 1_555 A C 11 1_555 -0.156 -0.145 -0.004 -7.168 -11.323 -1.283 4 A_G6:C13_A A 6 ? A 13 ? 19 1 1 A C 24 1_555 A G 9 1_555 0.335 -0.164 -0.054 10.456 -27.091 1.437 5 A_C26:G11_A A 26 ? A 11 ? 19 1 1 A G 25 1_555 A C 8 1_555 -0.134 -0.264 0.222 -3.202 -13.742 -0.756 6 A_G27:C10_A A 27 ? A 10 ? 19 1 1 A G 26 1_555 A C 7 1_555 -0.149 -0.133 -0.057 -10.989 -17.097 0.438 7 A_G28:C9_A A 28 ? A 9 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 14 1_555 A C 2 1_555 A G 13 1_555 -0.561 -1.441 3.089 -2.148 2.092 32.686 -2.886 0.647 3.023 3.708 3.807 32.819 1 AA_G3C4:G15C16_AA A 3 ? A 16 ? A 4 ? A 15 ? 1 A C 2 1_555 A G 13 1_555 A G 3 1_555 A C 12 1_555 0.028 -1.765 3.292 1.404 10.605 28.080 -5.399 0.209 2.474 20.921 -2.771 30.010 2 AA_C4G5:C14G15_AA A 4 ? A 15 ? A 5 ? A 14 ? 1 A G 3 1_555 A C 12 1_555 A G 4 1_555 A C 11 1_555 0.365 -1.795 3.189 3.432 5.341 34.819 -3.693 -0.126 2.912 8.834 -5.677 35.376 3 AA_G5G6:C13C14_AA A 5 ? A 14 ? A 6 ? A 13 ? 1 A G 4 1_555 A C 11 1_555 A C 24 1_555 A G 9 1_555 -5.806 -0.428 3.542 13.437 -3.723 91.374 -0.227 4.282 2.872 -2.589 -9.346 92.198 4 AA_G6C26:G11C13_AA A 6 ? A 13 ? A 26 ? A 11 ? 1 A C 24 1_555 A G 9 1_555 A G 25 1_555 A C 8 1_555 -0.474 -1.684 3.446 -4.625 13.791 31.099 -4.947 0.104 2.538 24.137 8.095 34.256 5 AA_C26G27:C10G11_AA A 26 ? A 11 ? A 27 ? A 10 ? 1 A G 25 1_555 A C 8 1_555 A G 26 1_555 A C 7 1_555 0.317 -1.755 3.442 3.935 4.928 32.742 -3.896 0.114 3.167 8.642 -6.901 33.327 6 AA_G27G28:C9C10_AA A 27 ? A 10 ? A 28 ? A 9 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 437D _pdbx_initial_refinement_model.details 'PDB Entry 437D' #