data_2A8G # _entry.id 2A8G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2A8G pdb_00002a8g 10.2210/pdb2a8g/pdb RCSB RCSB033618 ? ? WWPDB D_1000033618 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-05-23 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 1 4 2020-07-29 6 'Structure model' 1 5 2023-08-23 7 'Structure model' 1 6 2024-10-30 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Structure summary' 9 6 'Structure model' 'Data collection' 10 6 'Structure model' 'Database references' 11 6 'Structure model' 'Refinement description' 12 6 'Structure model' 'Structure summary' 13 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp 3 5 'Structure model' entity 4 5 'Structure model' pdbx_chem_comp_identifier 5 5 'Structure model' pdbx_entity_nonpoly 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_ref_seq_dif 8 5 'Structure model' struct_site 9 5 'Structure model' struct_site_gen 10 6 'Structure model' chem_comp 11 6 'Structure model' chem_comp_atom 12 6 'Structure model' chem_comp_bond 13 6 'Structure model' database_2 14 6 'Structure model' pdbx_initial_refinement_model 15 6 'Structure model' struct_ncs_dom_lim 16 7 'Structure model' pdbx_entry_details 17 7 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' 10 5 'Structure model' '_chem_comp.name' 11 5 'Structure model' '_chem_comp.type' 12 5 'Structure model' '_entity.pdbx_description' 13 5 'Structure model' '_pdbx_entity_nonpoly.name' 14 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 15 5 'Structure model' '_struct_conn.pdbx_role' 16 5 'Structure model' '_struct_ref_seq_dif.details' 17 6 'Structure model' '_chem_comp.pdbx_synonyms' 18 6 'Structure model' '_database_2.pdbx_DOI' 19 6 'Structure model' '_database_2.pdbx_database_accession' 20 6 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 21 6 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' # _pdbx_database_status.entry_id 2A8G _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2005-07-08 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Conners, R.' 1 'Hooley, E.' 2 'Thomas, S.' 3 'Brady, R.L.' 4 # _citation.id primary _citation.title 'Recognition of oxidatively modified bases within the biotin-binding site of avidin.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 357 _citation.page_first 263 _citation.page_last 274 _citation.year 2006 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16413579 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2005.12.054 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Conners, R.' 1 ? primary 'Hooley, E.' 2 ? primary 'Clarke, A.R.' 3 ? primary 'Thomas, S.' 4 ? primary 'Brady, R.L.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Avidin 14121.810 2 ? ? ? ? 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? 3 non-polymer syn "2'-DEOXY-GUANOSINE" 267.241 1 ? ? ? ? 4 water nat water 18.015 50 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYTTAVTATSNEIKESPLHGTENTINKRTQPTFGFTVNWKFSESTTVFTGQ CFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGINIFTRLRTQKE ; _entity_poly.pdbx_seq_one_letter_code_can ;KCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYTTAVTATSNEIKESPLHGTENTINKRTQPTFGFTVNWKFSESTTVFTGQ CFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGINIFTRLRTQKE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 "2'-DEOXY-GUANOSINE" GNG 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 CYS n 1 3 SER n 1 4 LEU n 1 5 THR n 1 6 GLY n 1 7 LYS n 1 8 TRP n 1 9 THR n 1 10 ASN n 1 11 ASP n 1 12 LEU n 1 13 GLY n 1 14 SER n 1 15 ASN n 1 16 MET n 1 17 THR n 1 18 ILE n 1 19 GLY n 1 20 ALA n 1 21 VAL n 1 22 ASN n 1 23 SER n 1 24 ARG n 1 25 GLY n 1 26 GLU n 1 27 PHE n 1 28 THR n 1 29 GLY n 1 30 THR n 1 31 TYR n 1 32 THR n 1 33 THR n 1 34 ALA n 1 35 VAL n 1 36 THR n 1 37 ALA n 1 38 THR n 1 39 SER n 1 40 ASN n 1 41 GLU n 1 42 ILE n 1 43 LYS n 1 44 GLU n 1 45 SER n 1 46 PRO n 1 47 LEU n 1 48 HIS n 1 49 GLY n 1 50 THR n 1 51 GLU n 1 52 ASN n 1 53 THR n 1 54 ILE n 1 55 ASN n 1 56 LYS n 1 57 ARG n 1 58 THR n 1 59 GLN n 1 60 PRO n 1 61 THR n 1 62 PHE n 1 63 GLY n 1 64 PHE n 1 65 THR n 1 66 VAL n 1 67 ASN n 1 68 TRP n 1 69 LYS n 1 70 PHE n 1 71 SER n 1 72 GLU n 1 73 SER n 1 74 THR n 1 75 THR n 1 76 VAL n 1 77 PHE n 1 78 THR n 1 79 GLY n 1 80 GLN n 1 81 CYS n 1 82 PHE n 1 83 ILE n 1 84 ASP n 1 85 ARG n 1 86 ASN n 1 87 GLY n 1 88 LYS n 1 89 GLU n 1 90 VAL n 1 91 LEU n 1 92 LYS n 1 93 THR n 1 94 MET n 1 95 TRP n 1 96 LEU n 1 97 LEU n 1 98 ARG n 1 99 SER n 1 100 SER n 1 101 VAL n 1 102 ASN n 1 103 ASP n 1 104 ILE n 1 105 GLY n 1 106 ASP n 1 107 ASP n 1 108 TRP n 1 109 LYS n 1 110 ALA n 1 111 THR n 1 112 ARG n 1 113 VAL n 1 114 GLY n 1 115 ILE n 1 116 ASN n 1 117 ILE n 1 118 PHE n 1 119 THR n 1 120 ARG n 1 121 LEU n 1 122 ARG n 1 123 THR n 1 124 GLN n 1 125 LYS n 1 126 GLU n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name chicken _entity_src_nat.pdbx_organism_scientific 'Gallus gallus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9031 _entity_src_nat.genus Gallus _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details 'egg white' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GNG non-polymer n "2'-DEOXY-GUANOSINE" ? 'C10 H13 N5 O4' 267.241 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 3 3 LYS LYS A . n A 1 2 CYS 2 4 4 CYS CYS A . n A 1 3 SER 3 5 5 SER SER A . n A 1 4 LEU 4 6 6 LEU LEU A . n A 1 5 THR 5 7 7 THR THR A . n A 1 6 GLY 6 8 8 GLY GLY A . n A 1 7 LYS 7 9 9 LYS LYS A . n A 1 8 TRP 8 10 10 TRP TRP A . n A 1 9 THR 9 11 11 THR THR A . n A 1 10 ASN 10 12 12 ASN ASN A . n A 1 11 ASP 11 13 13 ASP ASP A . n A 1 12 LEU 12 14 14 LEU LEU A . n A 1 13 GLY 13 15 15 GLY GLY A . n A 1 14 SER 14 16 16 SER SER A . n A 1 15 ASN 15 17 17 ASN ASN A . n A 1 16 MET 16 18 18 MET MET A . n A 1 17 THR 17 19 19 THR THR A . n A 1 18 ILE 18 20 20 ILE ILE A . n A 1 19 GLY 19 21 21 GLY GLY A . n A 1 20 ALA 20 22 22 ALA ALA A . n A 1 21 VAL 21 23 23 VAL VAL A . n A 1 22 ASN 22 24 24 ASN ASN A . n A 1 23 SER 23 25 25 SER SER A . n A 1 24 ARG 24 26 26 ARG ARG A . n A 1 25 GLY 25 27 27 GLY GLY A . n A 1 26 GLU 26 28 28 GLU GLU A . n A 1 27 PHE 27 29 29 PHE PHE A . n A 1 28 THR 28 30 30 THR THR A . n A 1 29 GLY 29 31 31 GLY GLY A . n A 1 30 THR 30 32 32 THR THR A . n A 1 31 TYR 31 33 33 TYR TYR A . n A 1 32 THR 32 34 34 THR THR A . n A 1 33 THR 33 35 35 THR THR A . n A 1 34 ALA 34 36 36 ALA ALA A . n A 1 35 VAL 35 37 37 VAL VAL A . n A 1 36 THR 36 38 38 THR THR A . n A 1 37 ALA 37 39 39 ALA ALA A . n A 1 38 THR 38 40 40 THR THR A . n A 1 39 SER 39 41 41 SER SER A . n A 1 40 ASN 40 42 42 ASN ASN A . n A 1 41 GLU 41 43 43 GLU GLU A . n A 1 42 ILE 42 44 44 ILE ILE A . n A 1 43 LYS 43 45 45 LYS LYS A . n A 1 44 GLU 44 46 46 GLU GLU A . n A 1 45 SER 45 47 47 SER SER A . n A 1 46 PRO 46 48 48 PRO PRO A . n A 1 47 LEU 47 49 49 LEU LEU A . n A 1 48 HIS 48 50 50 HIS HIS A . n A 1 49 GLY 49 51 51 GLY GLY A . n A 1 50 THR 50 52 52 THR THR A . n A 1 51 GLU 51 53 53 GLU GLU A . n A 1 52 ASN 52 54 54 ASN ASN A . n A 1 53 THR 53 55 55 THR THR A . n A 1 54 ILE 54 56 56 ILE ILE A . n A 1 55 ASN 55 57 57 ASN ASN A . n A 1 56 LYS 56 58 58 LYS LYS A . n A 1 57 ARG 57 59 59 ARG ARG A . n A 1 58 THR 58 60 60 THR THR A . n A 1 59 GLN 59 61 61 GLN GLN A . n A 1 60 PRO 60 62 62 PRO PRO A . n A 1 61 THR 61 63 63 THR THR A . n A 1 62 PHE 62 64 64 PHE PHE A . n A 1 63 GLY 63 65 65 GLY GLY A . n A 1 64 PHE 64 66 66 PHE PHE A . n A 1 65 THR 65 67 67 THR THR A . n A 1 66 VAL 66 68 68 VAL VAL A . n A 1 67 ASN 67 69 69 ASN ASN A . n A 1 68 TRP 68 70 70 TRP TRP A . n A 1 69 LYS 69 71 71 LYS LYS A . n A 1 70 PHE 70 72 72 PHE PHE A . n A 1 71 SER 71 73 73 SER SER A . n A 1 72 GLU 72 74 74 GLU GLU A . n A 1 73 SER 73 75 75 SER SER A . n A 1 74 THR 74 76 76 THR THR A . n A 1 75 THR 75 77 77 THR THR A . n A 1 76 VAL 76 78 78 VAL VAL A . n A 1 77 PHE 77 79 79 PHE PHE A . n A 1 78 THR 78 80 80 THR THR A . n A 1 79 GLY 79 81 81 GLY GLY A . n A 1 80 GLN 80 82 82 GLN GLN A . n A 1 81 CYS 81 83 83 CYS CYS A . n A 1 82 PHE 82 84 84 PHE PHE A . n A 1 83 ILE 83 85 85 ILE ILE A . n A 1 84 ASP 84 86 86 ASP ASP A . n A 1 85 ARG 85 87 87 ARG ARG A . n A 1 86 ASN 86 88 88 ASN ASN A . n A 1 87 GLY 87 89 89 GLY GLY A . n A 1 88 LYS 88 90 90 LYS LYS A . n A 1 89 GLU 89 91 91 GLU GLU A . n A 1 90 VAL 90 92 92 VAL VAL A . n A 1 91 LEU 91 93 93 LEU LEU A . n A 1 92 LYS 92 94 94 LYS LYS A . n A 1 93 THR 93 95 95 THR THR A . n A 1 94 MET 94 96 96 MET MET A . n A 1 95 TRP 95 97 97 TRP TRP A . n A 1 96 LEU 96 98 98 LEU LEU A . n A 1 97 LEU 97 99 99 LEU LEU A . n A 1 98 ARG 98 100 100 ARG ARG A . n A 1 99 SER 99 101 101 SER SER A . n A 1 100 SER 100 102 102 SER SER A . n A 1 101 VAL 101 103 103 VAL VAL A . n A 1 102 ASN 102 104 104 ASN ASN A . n A 1 103 ASP 103 105 105 ASP ASP A . n A 1 104 ILE 104 106 106 ILE ILE A . n A 1 105 GLY 105 107 107 GLY GLY A . n A 1 106 ASP 106 108 108 ASP ASP A . n A 1 107 ASP 107 109 109 ASP ASP A . n A 1 108 TRP 108 110 110 TRP TRP A . n A 1 109 LYS 109 111 111 LYS LYS A . n A 1 110 ALA 110 112 112 ALA ALA A . n A 1 111 THR 111 113 113 THR THR A . n A 1 112 ARG 112 114 114 ARG ARG A . n A 1 113 VAL 113 115 115 VAL VAL A . n A 1 114 GLY 114 116 116 GLY GLY A . n A 1 115 ILE 115 117 117 ILE ILE A . n A 1 116 ASN 116 118 118 ASN ASN A . n A 1 117 ILE 117 119 119 ILE ILE A . n A 1 118 PHE 118 120 120 PHE PHE A . n A 1 119 THR 119 121 121 THR THR A . n A 1 120 ARG 120 122 122 ARG ARG A . n A 1 121 LEU 121 123 123 LEU LEU A . n A 1 122 ARG 122 124 ? ? ? A . n A 1 123 THR 123 125 ? ? ? A . n A 1 124 GLN 124 126 ? ? ? A . n A 1 125 LYS 125 127 ? ? ? A . n A 1 126 GLU 126 128 ? ? ? A . n B 1 1 LYS 1 3 3 LYS LYS B . n B 1 2 CYS 2 4 4 CYS CYS B . n B 1 3 SER 3 5 5 SER SER B . n B 1 4 LEU 4 6 6 LEU LEU B . n B 1 5 THR 5 7 7 THR THR B . n B 1 6 GLY 6 8 8 GLY GLY B . n B 1 7 LYS 7 9 9 LYS LYS B . n B 1 8 TRP 8 10 10 TRP TRP B . n B 1 9 THR 9 11 11 THR THR B . n B 1 10 ASN 10 12 12 ASN ASN B . n B 1 11 ASP 11 13 13 ASP ASP B . n B 1 12 LEU 12 14 14 LEU LEU B . n B 1 13 GLY 13 15 15 GLY GLY B . n B 1 14 SER 14 16 16 SER SER B . n B 1 15 ASN 15 17 17 ASN ASN B . n B 1 16 MET 16 18 18 MET MET B . n B 1 17 THR 17 19 19 THR THR B . n B 1 18 ILE 18 20 20 ILE ILE B . n B 1 19 GLY 19 21 21 GLY GLY B . n B 1 20 ALA 20 22 22 ALA ALA B . n B 1 21 VAL 21 23 23 VAL VAL B . n B 1 22 ASN 22 24 24 ASN ASN B . n B 1 23 SER 23 25 25 SER SER B . n B 1 24 ARG 24 26 26 ARG ARG B . n B 1 25 GLY 25 27 27 GLY GLY B . n B 1 26 GLU 26 28 28 GLU GLU B . n B 1 27 PHE 27 29 29 PHE PHE B . n B 1 28 THR 28 30 30 THR THR B . n B 1 29 GLY 29 31 31 GLY GLY B . n B 1 30 THR 30 32 32 THR THR B . n B 1 31 TYR 31 33 33 TYR TYR B . n B 1 32 THR 32 34 34 THR THR B . n B 1 33 THR 33 35 35 THR THR B . n B 1 34 ALA 34 36 36 ALA ALA B . n B 1 35 VAL 35 37 37 VAL VAL B . n B 1 36 THR 36 38 38 THR THR B . n B 1 37 ALA 37 39 39 ALA ALA B . n B 1 38 THR 38 40 40 THR THR B . n B 1 39 SER 39 41 41 SER SER B . n B 1 40 ASN 40 42 42 ASN ASN B . n B 1 41 GLU 41 43 43 GLU GLU B . n B 1 42 ILE 42 44 44 ILE ILE B . n B 1 43 LYS 43 45 45 LYS LYS B . n B 1 44 GLU 44 46 46 GLU GLU B . n B 1 45 SER 45 47 47 SER SER B . n B 1 46 PRO 46 48 48 PRO PRO B . n B 1 47 LEU 47 49 49 LEU LEU B . n B 1 48 HIS 48 50 50 HIS HIS B . n B 1 49 GLY 49 51 51 GLY GLY B . n B 1 50 THR 50 52 52 THR THR B . n B 1 51 GLU 51 53 53 GLU GLU B . n B 1 52 ASN 52 54 54 ASN ASN B . n B 1 53 THR 53 55 55 THR THR B . n B 1 54 ILE 54 56 56 ILE ILE B . n B 1 55 ASN 55 57 57 ASN ASN B . n B 1 56 LYS 56 58 58 LYS LYS B . n B 1 57 ARG 57 59 59 ARG ARG B . n B 1 58 THR 58 60 60 THR THR B . n B 1 59 GLN 59 61 61 GLN GLN B . n B 1 60 PRO 60 62 62 PRO PRO B . n B 1 61 THR 61 63 63 THR THR B . n B 1 62 PHE 62 64 64 PHE PHE B . n B 1 63 GLY 63 65 65 GLY GLY B . n B 1 64 PHE 64 66 66 PHE PHE B . n B 1 65 THR 65 67 67 THR THR B . n B 1 66 VAL 66 68 68 VAL VAL B . n B 1 67 ASN 67 69 69 ASN ASN B . n B 1 68 TRP 68 70 70 TRP TRP B . n B 1 69 LYS 69 71 71 LYS LYS B . n B 1 70 PHE 70 72 72 PHE PHE B . n B 1 71 SER 71 73 73 SER SER B . n B 1 72 GLU 72 74 74 GLU GLU B . n B 1 73 SER 73 75 75 SER SER B . n B 1 74 THR 74 76 76 THR THR B . n B 1 75 THR 75 77 77 THR THR B . n B 1 76 VAL 76 78 78 VAL VAL B . n B 1 77 PHE 77 79 79 PHE PHE B . n B 1 78 THR 78 80 80 THR THR B . n B 1 79 GLY 79 81 81 GLY GLY B . n B 1 80 GLN 80 82 82 GLN GLN B . n B 1 81 CYS 81 83 83 CYS CYS B . n B 1 82 PHE 82 84 84 PHE PHE B . n B 1 83 ILE 83 85 85 ILE ILE B . n B 1 84 ASP 84 86 86 ASP ASP B . n B 1 85 ARG 85 87 87 ARG ARG B . n B 1 86 ASN 86 88 88 ASN ASN B . n B 1 87 GLY 87 89 89 GLY GLY B . n B 1 88 LYS 88 90 90 LYS LYS B . n B 1 89 GLU 89 91 91 GLU GLU B . n B 1 90 VAL 90 92 92 VAL VAL B . n B 1 91 LEU 91 93 93 LEU LEU B . n B 1 92 LYS 92 94 94 LYS LYS B . n B 1 93 THR 93 95 95 THR THR B . n B 1 94 MET 94 96 96 MET MET B . n B 1 95 TRP 95 97 97 TRP TRP B . n B 1 96 LEU 96 98 98 LEU LEU B . n B 1 97 LEU 97 99 99 LEU LEU B . n B 1 98 ARG 98 100 100 ARG ARG B . n B 1 99 SER 99 101 101 SER SER B . n B 1 100 SER 100 102 102 SER SER B . n B 1 101 VAL 101 103 103 VAL VAL B . n B 1 102 ASN 102 104 104 ASN ASN B . n B 1 103 ASP 103 105 105 ASP ASP B . n B 1 104 ILE 104 106 106 ILE ILE B . n B 1 105 GLY 105 107 107 GLY GLY B . n B 1 106 ASP 106 108 108 ASP ASP B . n B 1 107 ASP 107 109 109 ASP ASP B . n B 1 108 TRP 108 110 110 TRP TRP B . n B 1 109 LYS 109 111 111 LYS LYS B . n B 1 110 ALA 110 112 112 ALA ALA B . n B 1 111 THR 111 113 113 THR THR B . n B 1 112 ARG 112 114 114 ARG ARG B . n B 1 113 VAL 113 115 115 VAL VAL B . n B 1 114 GLY 114 116 116 GLY GLY B . n B 1 115 ILE 115 117 117 ILE ILE B . n B 1 116 ASN 116 118 118 ASN ASN B . n B 1 117 ILE 117 119 119 ILE ILE B . n B 1 118 PHE 118 120 120 PHE PHE B . n B 1 119 THR 119 121 121 THR THR B . n B 1 120 ARG 120 122 122 ARG ARG B . n B 1 121 LEU 121 123 123 LEU LEU B . n B 1 122 ARG 122 124 ? ? ? B . n B 1 123 THR 123 125 ? ? ? B . n B 1 124 GLN 124 126 ? ? ? B . n B 1 125 LYS 125 127 ? ? ? B . n B 1 126 GLU 126 128 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG 1 201 201 NAG NAG A . D 2 NAG 1 202 202 NAG NAG B . E 3 GNG 1 201 201 GNG GNG B . F 4 HOH 1 202 3 HOH HOH A . F 4 HOH 2 203 81 HOH HOH A . F 4 HOH 3 204 5 HOH HOH A . F 4 HOH 4 205 7 HOH HOH A . F 4 HOH 5 206 10 HOH HOH A . F 4 HOH 6 207 14 HOH HOH A . F 4 HOH 7 208 15 HOH HOH A . F 4 HOH 8 209 16 HOH HOH A . F 4 HOH 9 210 22 HOH HOH A . F 4 HOH 10 211 24 HOH HOH A . F 4 HOH 11 212 87 HOH HOH A . F 4 HOH 12 213 25 HOH HOH A . F 4 HOH 13 214 31 HOH HOH A . F 4 HOH 14 215 37 HOH HOH A . F 4 HOH 15 216 40 HOH HOH A . F 4 HOH 16 217 41 HOH HOH A . F 4 HOH 17 218 56 HOH HOH A . F 4 HOH 18 219 58 HOH HOH A . F 4 HOH 19 220 62 HOH HOH A . F 4 HOH 20 221 77 HOH HOH A . G 4 HOH 1 203 1 HOH HOH B . G 4 HOH 2 204 2 HOH HOH B . G 4 HOH 3 205 80 HOH HOH B . G 4 HOH 4 206 4 HOH HOH B . G 4 HOH 5 207 82 HOH HOH B . G 4 HOH 6 208 9 HOH HOH B . G 4 HOH 7 209 83 HOH HOH B . G 4 HOH 8 210 12 HOH HOH B . G 4 HOH 9 211 84 HOH HOH B . G 4 HOH 10 212 18 HOH HOH B . G 4 HOH 11 213 85 HOH HOH B . G 4 HOH 12 214 19 HOH HOH B . G 4 HOH 13 215 23 HOH HOH B . G 4 HOH 14 216 86 HOH HOH B . G 4 HOH 15 217 88 HOH HOH B . G 4 HOH 16 218 27 HOH HOH B . G 4 HOH 17 219 89 HOH HOH B . G 4 HOH 18 220 36 HOH HOH B . G 4 HOH 19 221 39 HOH HOH B . G 4 HOH 20 222 50 HOH HOH B . G 4 HOH 21 223 60 HOH HOH B . G 4 HOH 22 224 61 HOH HOH B . G 4 HOH 23 225 68 HOH HOH B . G 4 HOH 24 226 69 HOH HOH B . G 4 HOH 25 227 70 HOH HOH B . G 4 HOH 26 228 71 HOH HOH B . G 4 HOH 27 229 74 HOH HOH B . G 4 HOH 28 230 75 HOH HOH B . G 4 HOH 29 231 76 HOH HOH B . G 4 HOH 30 232 28 HOH HOH B . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 PHASER . ? program 'R. J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 4 PDB_EXTRACT 1.700 'May. 30, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 6 # _cell.entry_id 2A8G _cell.length_a 70.307 _cell.length_b 79.454 _cell.length_c 43.005 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2A8G _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2A8G _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 40.8 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '50mM Na Citrate, 20% PEG 8000, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2005-05-08 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ;double crystal monochromator 200 by 200 micron2 collimator ; _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.488 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX10.1' _diffrn_source.pdbx_wavelength 1.488 _diffrn_source.pdbx_wavelength_list 1.488 _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX10.1 # _reflns.entry_id 2A8G _reflns.d_resolution_low 52.63 _reflns.d_resolution_high 1.99 _reflns.number_obs 15790 _reflns.percent_possible_obs 92.500 _reflns.pdbx_Rmerge_I_obs 0.103 _reflns.pdbx_chi_squared 1.069 _reflns.pdbx_redundancy 4.700 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_netI_over_sigmaI 17.4 _reflns.pdbx_Rsym_value 0.125 _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.number_all 28039 _reflns.B_iso_Wilson_estimate 41.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_low 2.07 _reflns_shell.d_res_high 2.00 _reflns_shell.number_measured_obs 916 _reflns_shell.percent_possible_obs 54.500 _reflns_shell.Rmerge_I_obs 0.202 _reflns_shell.pdbx_chi_squared 0.294 _reflns_shell.pdbx_redundancy 1.600 _reflns_shell.number_unique_obs ? _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.pdbx_Rsym_value 0.203 _reflns_shell.percent_possible_all 92.5 _reflns_shell.number_unique_all 916 _reflns_shell.number_measured_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_d_res_high 1.990 _refine.ls_d_res_low 52.630 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 92.070 _refine.ls_number_reflns_obs 15758 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all 0.22 _refine.ls_R_factor_R_work 0.218 _refine.ls_R_factor_R_free 0.268 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 797 _refine.B_iso_mean 42.052 _refine.aniso_B[1][1] 2.110 _refine.aniso_B[2][2] -1.950 _refine.aniso_B[3][3] -0.160 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.943 _refine.correlation_coeff_Fo_to_Fc_free 0.930 _refine.pdbx_overall_ESU_R 0.242 _refine.pdbx_overall_ESU_R_Free 0.204 _refine.overall_SU_ML 0.118 _refine.overall_SU_B 4.076 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.entry_id 2A8G _refine.pdbx_ls_sigma_I 2.0 _refine.ls_number_reflns_all 15758 _refine.ls_R_factor_obs 0.232 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 1JJ8' _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model isotropic _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1892 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 47 _refine_hist.number_atoms_solvent 50 _refine_hist.number_atoms_total 1989 _refine_hist.d_res_high 1.990 _refine_hist.d_res_low 52.630 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1983 0.019 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2693 1.944 1.948 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 240 8.788 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 84 35.477 24.048 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 332 16.328 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 12 23.928 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 313 0.154 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1454 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 723 0.228 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1288 0.307 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 59 0.157 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 33 0.170 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 2 0.189 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1219 1.395 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1940 2.228 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 891 2.478 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 753 3.857 4.500 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id 1 'TIGHT POSITIONAL' A 849 0.060 0.050 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? 1 'TIGHT THERMAL' A 849 0.320 0.500 1 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? # _refine_ls_shell.d_res_high 1.991 _refine_ls_shell.d_res_low 2.043 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 47.620 _refine_ls_shell.number_reflns_R_work 566 _refine_ls_shell.R_factor_R_work 0.325 _refine_ls_shell.R_factor_R_free 0.514 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 34 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 600 _refine_ls_shell.number_reflns_obs 566 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B 1 3 A 1 4 B 1 5 A 1 6 B # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A LYS 1 . A ALA 34 . A LYS 3 A ALA 36 1 ? 1 2 1 B LYS 1 . B ALA 34 . B LYS 3 B ALA 36 1 ? 1 3 2 A ILE 42 . A ILE 83 . A ILE 44 A ILE 85 1 ? 1 4 2 B ILE 42 . B ILE 83 . B ILE 44 B ILE 85 1 ? 1 5 3 A VAL 90 . A LEU 121 . A VAL 92 A LEU 123 1 ? 1 6 3 B VAL 90 . B LEU 121 . B VAL 92 B LEU 123 1 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 2A8G _struct.title 'Structure of Avidin in complex with the ligand deoxyguanosine' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2A8G _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.text 'Beta barrel, UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code AVID_CHICK _struct_ref.pdbx_db_accession P02701 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KCSLTGKWTNDLGSNMTIGAVNSRGEFTGTYITAVTATSNEIKESPLHGTENTINKRTQPTFGFTVNWKFSESTTVFTGQ CFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGINIFTRLRTQKE ; _struct_ref.pdbx_align_begin 27 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2A8G A 1 ? 126 ? P02701 27 ? 152 ? 3 128 2 1 2A8G B 1 ? 126 ? P02701 27 ? 152 ? 3 128 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2A8G THR A 32 ? UNP P02701 ILE 58 variant 34 1 2 2A8G THR B 32 ? UNP P02701 ILE 58 variant 34 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 12000 ? 1 MORE -36 ? 1 'SSA (A^2)' 21310 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 53 ? ARG A 57 ? THR A 55 ARG A 59 5 ? 5 HELX_P HELX_P2 2 ASP A 103 ? LYS A 109 ? ASP A 105 LYS A 111 5 ? 7 HELX_P HELX_P3 3 THR B 53 ? ARG B 57 ? THR B 55 ARG B 59 5 ? 5 HELX_P HELX_P4 4 ASP B 103 ? LYS B 109 ? ASP B 105 LYS B 111 5 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 A CYS 81 SG ? ? A CYS 4 A CYS 83 1_555 ? ? ? ? ? ? ? 2.003 ? ? disulf2 disulf ? ? B CYS 2 SG ? ? ? 1_555 B CYS 81 SG ? ? B CYS 4 B CYS 83 1_555 ? ? ? ? ? ? ? 2.006 ? ? covale1 covale one ? A ASN 15 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 17 A NAG 201 1_555 ? ? ? ? ? ? ? 1.450 ? N-Glycosylation covale2 covale one ? B ASN 15 ND2 ? ? ? 1_555 D NAG . C1 ? ? B ASN 17 B NAG 202 1_555 ? ? ? ? ? ? ? 1.435 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG C . ? ASN A 15 ? NAG A 201 ? 1_555 ASN A 17 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG D . ? ASN B 15 ? NAG B 202 ? 1_555 ASN B 17 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 CYS A 2 ? CYS A 81 ? CYS A 4 ? 1_555 CYS A 83 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 2 ? CYS B 81 ? CYS B 4 ? 1_555 CYS B 83 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 35 A . ? VAL 37 A THR 36 A ? THR 38 A 1 9.40 2 SER 39 A . ? SER 41 A ASN 40 A ? ASN 42 A 1 -8.34 3 ALA 34 B . ? ALA 36 B VAL 35 B ? VAL 37 B 1 -27.50 4 ASN 40 B . ? ASN 42 B GLU 41 B ? GLU 43 B 1 -16.76 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 9 ? B ? 9 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel B 8 9 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 6 ? ASN A 10 ? GLY A 8 ASN A 12 A 2 ASN A 15 ? ILE A 18 ? ASN A 17 ILE A 20 A 3 GLU A 26 ? THR A 33 ? GLU A 28 THR A 35 A 4 LYS A 43 ? GLU A 51 ? LYS A 45 GLU A 53 A 5 THR A 61 ? ASN A 67 ? THR A 63 ASN A 69 A 6 THR A 74 ? ILE A 83 ? THR A 76 ILE A 85 A 7 GLU A 89 ? ARG A 98 ? GLU A 91 ARG A 100 A 8 THR A 111 ? ARG A 120 ? THR A 113 ARG A 122 A 9 GLY A 6 ? ASN A 10 ? GLY A 8 ASN A 12 B 1 GLY B 6 ? ASN B 10 ? GLY B 8 ASN B 12 B 2 ASN B 15 ? ILE B 18 ? ASN B 17 ILE B 20 B 3 GLU B 26 ? THR B 33 ? GLU B 28 THR B 35 B 4 LYS B 43 ? GLU B 51 ? LYS B 45 GLU B 53 B 5 THR B 61 ? ASN B 67 ? THR B 63 ASN B 69 B 6 THR B 74 ? ILE B 83 ? THR B 76 ILE B 85 B 7 GLU B 89 ? ARG B 98 ? GLU B 91 ARG B 100 B 8 THR B 111 ? ARG B 120 ? THR B 113 ARG B 122 B 9 GLY B 6 ? ASN B 10 ? GLY B 8 ASN B 12 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TRP A 8 ? N TRP A 10 O MET A 16 ? O MET A 18 A 2 3 N ASN A 15 ? N ASN A 17 O THR A 32 ? O THR A 34 A 3 4 N TYR A 31 ? N TYR A 33 O SER A 45 ? O SER A 47 A 4 5 N HIS A 48 ? N HIS A 50 O THR A 65 ? O THR A 67 A 5 6 N VAL A 66 ? N VAL A 68 O THR A 75 ? O THR A 77 A 6 7 N PHE A 82 ? N PHE A 84 O VAL A 90 ? O VAL A 92 A 7 8 N LEU A 97 ? N LEU A 99 O ARG A 112 ? O ARG A 114 A 8 9 O THR A 119 ? O THR A 121 N THR A 9 ? N THR A 11 B 1 2 N TRP B 8 ? N TRP B 10 O MET B 16 ? O MET B 18 B 2 3 N ASN B 15 ? N ASN B 17 O THR B 32 ? O THR B 34 B 3 4 N THR B 33 ? N THR B 35 O LYS B 43 ? O LYS B 45 B 4 5 N HIS B 48 ? N HIS B 50 O THR B 65 ? O THR B 67 B 5 6 N VAL B 66 ? N VAL B 68 O THR B 75 ? O THR B 77 B 6 7 N PHE B 82 ? N PHE B 84 O VAL B 90 ? O VAL B 92 B 7 8 N LEU B 97 ? N LEU B 99 O ARG B 112 ? O ARG B 114 B 8 9 O THR B 119 ? O THR B 121 N THR B 9 ? N THR B 11 # _pdbx_entry_details.entry_id 2A8G _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB A CYS 4 ? ? SG A CYS 4 ? ? 1.926 1.818 0.108 0.017 N 2 1 C A ALA 39 ? ? N A THR 40 ? ? 1.573 1.336 0.237 0.023 Y 3 1 CB A VAL 115 ? ? CG2 A VAL 115 ? ? 1.651 1.524 0.127 0.021 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A LEU 49 ? ? CB A LEU 49 ? ? CG A LEU 49 ? ? 137.43 115.30 22.13 2.30 N 2 1 C B THR 35 ? ? N B ALA 36 ? ? CA B ALA 36 ? ? 137.89 121.70 16.19 2.50 Y 3 1 CA B LEU 49 ? ? CB B LEU 49 ? ? CG B LEU 49 ? ? 134.03 115.30 18.73 2.30 N 4 1 CB B LEU 49 ? ? CG B LEU 49 ? ? CD2 B LEU 49 ? ? 123.47 111.00 12.47 1.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 37 ? ? 175.39 71.70 2 1 THR A 38 ? ? -155.19 -59.14 3 1 THR A 40 ? ? -5.29 -48.98 4 1 ASN A 42 ? ? -123.49 -87.96 5 1 GLU A 43 ? ? -122.31 -139.77 6 1 LYS A 58 ? ? 34.49 52.57 7 1 ARG A 87 ? ? -40.89 34.76 8 1 ASN A 88 ? ? 133.97 91.11 9 1 ALA B 36 ? ? 27.28 -176.60 10 1 ALA B 39 ? ? 175.12 -121.19 11 1 THR B 40 ? ? 79.41 -169.08 12 1 ASN B 42 ? ? -82.93 -109.87 13 1 LYS B 58 ? ? 37.96 49.38 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 GLU A 43 ? ? ILE A 44 ? ? -141.46 2 1 THR B 35 ? ? ALA B 36 ? ? 57.89 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 15 A ASN 17 ? ASN 'GLYCOSYLATION SITE' 2 B ASN 15 B ASN 17 ? ASN 'GLYCOSYLATION SITE' # _pdbx_phasing_MR.entry_id 2A8G _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation ? _pdbx_phasing_MR.d_res_low_rotation ? _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 29.181 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 124 ? A ARG 122 2 1 Y 1 A THR 125 ? A THR 123 3 1 Y 1 A GLN 126 ? A GLN 124 4 1 Y 1 A LYS 127 ? A LYS 125 5 1 Y 1 A GLU 128 ? A GLU 126 6 1 Y 1 B ARG 124 ? B ARG 122 7 1 Y 1 B THR 125 ? B THR 123 8 1 Y 1 B GLN 126 ? B GLN 124 9 1 Y 1 B LYS 127 ? B LYS 125 10 1 Y 1 B GLU 128 ? B GLU 126 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GNG "O5'" O N N 137 GNG "C5'" C N N 138 GNG "C4'" C N R 139 GNG "O4'" O N N 140 GNG "C1'" C N R 141 GNG N9 N Y N 142 GNG C8 C Y N 143 GNG N7 N Y N 144 GNG C5 C Y N 145 GNG C4 C Y N 146 GNG N3 N N N 147 GNG C2 C N N 148 GNG N1 N N N 149 GNG C6 C N N 150 GNG O6 O N N 151 GNG N2 N N N 152 GNG "C2'" C N N 153 GNG "C3'" C N S 154 GNG "O3'" O N N 155 GNG "H5'" H N N 156 GNG "H5'1" H N N 157 GNG "H5'2" H N N 158 GNG "H4'" H N N 159 GNG "H1'" H N N 160 GNG H8 H N N 161 GNG HN3 H N N 162 GNG HN21 H N N 163 GNG HN22 H N N 164 GNG "H2'1" H N N 165 GNG "H2'2" H N N 166 GNG "H3'" H N N 167 GNG H1 H N N 168 HIS N N N N 169 HIS CA C N S 170 HIS C C N N 171 HIS O O N N 172 HIS CB C N N 173 HIS CG C Y N 174 HIS ND1 N Y N 175 HIS CD2 C Y N 176 HIS CE1 C Y N 177 HIS NE2 N Y N 178 HIS OXT O N N 179 HIS H H N N 180 HIS H2 H N N 181 HIS HA H N N 182 HIS HB2 H N N 183 HIS HB3 H N N 184 HIS HD1 H N N 185 HIS HD2 H N N 186 HIS HE1 H N N 187 HIS HE2 H N N 188 HIS HXT H N N 189 HOH O O N N 190 HOH H1 H N N 191 HOH H2 H N N 192 ILE N N N N 193 ILE CA C N S 194 ILE C C N N 195 ILE O O N N 196 ILE CB C N S 197 ILE CG1 C N N 198 ILE CG2 C N N 199 ILE CD1 C N N 200 ILE OXT O N N 201 ILE H H N N 202 ILE H2 H N N 203 ILE HA H N N 204 ILE HB H N N 205 ILE HG12 H N N 206 ILE HG13 H N N 207 ILE HG21 H N N 208 ILE HG22 H N N 209 ILE HG23 H N N 210 ILE HD11 H N N 211 ILE HD12 H N N 212 ILE HD13 H N N 213 ILE HXT H N N 214 LEU N N N N 215 LEU CA C N S 216 LEU C C N N 217 LEU O O N N 218 LEU CB C N N 219 LEU CG C N N 220 LEU CD1 C N N 221 LEU CD2 C N N 222 LEU OXT O N N 223 LEU H H N N 224 LEU H2 H N N 225 LEU HA H N N 226 LEU HB2 H N N 227 LEU HB3 H N N 228 LEU HG H N N 229 LEU HD11 H N N 230 LEU HD12 H N N 231 LEU HD13 H N N 232 LEU HD21 H N N 233 LEU HD22 H N N 234 LEU HD23 H N N 235 LEU HXT H N N 236 LYS N N N N 237 LYS CA C N S 238 LYS C C N N 239 LYS O O N N 240 LYS CB C N N 241 LYS CG C N N 242 LYS CD C N N 243 LYS CE C N N 244 LYS NZ N N N 245 LYS OXT O N N 246 LYS H H N N 247 LYS H2 H N N 248 LYS HA H N N 249 LYS HB2 H N N 250 LYS HB3 H N N 251 LYS HG2 H N N 252 LYS HG3 H N N 253 LYS HD2 H N N 254 LYS HD3 H N N 255 LYS HE2 H N N 256 LYS HE3 H N N 257 LYS HZ1 H N N 258 LYS HZ2 H N N 259 LYS HZ3 H N N 260 LYS HXT H N N 261 MET N N N N 262 MET CA C N S 263 MET C C N N 264 MET O O N N 265 MET CB C N N 266 MET CG C N N 267 MET SD S N N 268 MET CE C N N 269 MET OXT O N N 270 MET H H N N 271 MET H2 H N N 272 MET HA H N N 273 MET HB2 H N N 274 MET HB3 H N N 275 MET HG2 H N N 276 MET HG3 H N N 277 MET HE1 H N N 278 MET HE2 H N N 279 MET HE3 H N N 280 MET HXT H N N 281 NAG C1 C N R 282 NAG C2 C N R 283 NAG C3 C N R 284 NAG C4 C N S 285 NAG C5 C N R 286 NAG C6 C N N 287 NAG C7 C N N 288 NAG C8 C N N 289 NAG N2 N N N 290 NAG O1 O N N 291 NAG O3 O N N 292 NAG O4 O N N 293 NAG O5 O N N 294 NAG O6 O N N 295 NAG O7 O N N 296 NAG H1 H N N 297 NAG H2 H N N 298 NAG H3 H N N 299 NAG H4 H N N 300 NAG H5 H N N 301 NAG H61 H N N 302 NAG H62 H N N 303 NAG H81 H N N 304 NAG H82 H N N 305 NAG H83 H N N 306 NAG HN2 H N N 307 NAG HO1 H N N 308 NAG HO3 H N N 309 NAG HO4 H N N 310 NAG HO6 H N N 311 PHE N N N N 312 PHE CA C N S 313 PHE C C N N 314 PHE O O N N 315 PHE CB C N N 316 PHE CG C Y N 317 PHE CD1 C Y N 318 PHE CD2 C Y N 319 PHE CE1 C Y N 320 PHE CE2 C Y N 321 PHE CZ C Y N 322 PHE OXT O N N 323 PHE H H N N 324 PHE H2 H N N 325 PHE HA H N N 326 PHE HB2 H N N 327 PHE HB3 H N N 328 PHE HD1 H N N 329 PHE HD2 H N N 330 PHE HE1 H N N 331 PHE HE2 H N N 332 PHE HZ H N N 333 PHE HXT H N N 334 PRO N N N N 335 PRO CA C N S 336 PRO C C N N 337 PRO O O N N 338 PRO CB C N N 339 PRO CG C N N 340 PRO CD C N N 341 PRO OXT O N N 342 PRO H H N N 343 PRO HA H N N 344 PRO HB2 H N N 345 PRO HB3 H N N 346 PRO HG2 H N N 347 PRO HG3 H N N 348 PRO HD2 H N N 349 PRO HD3 H N N 350 PRO HXT H N N 351 SER N N N N 352 SER CA C N S 353 SER C C N N 354 SER O O N N 355 SER CB C N N 356 SER OG O N N 357 SER OXT O N N 358 SER H H N N 359 SER H2 H N N 360 SER HA H N N 361 SER HB2 H N N 362 SER HB3 H N N 363 SER HG H N N 364 SER HXT H N N 365 THR N N N N 366 THR CA C N S 367 THR C C N N 368 THR O O N N 369 THR CB C N R 370 THR OG1 O N N 371 THR CG2 C N N 372 THR OXT O N N 373 THR H H N N 374 THR H2 H N N 375 THR HA H N N 376 THR HB H N N 377 THR HG1 H N N 378 THR HG21 H N N 379 THR HG22 H N N 380 THR HG23 H N N 381 THR HXT H N N 382 TRP N N N N 383 TRP CA C N S 384 TRP C C N N 385 TRP O O N N 386 TRP CB C N N 387 TRP CG C Y N 388 TRP CD1 C Y N 389 TRP CD2 C Y N 390 TRP NE1 N Y N 391 TRP CE2 C Y N 392 TRP CE3 C Y N 393 TRP CZ2 C Y N 394 TRP CZ3 C Y N 395 TRP CH2 C Y N 396 TRP OXT O N N 397 TRP H H N N 398 TRP H2 H N N 399 TRP HA H N N 400 TRP HB2 H N N 401 TRP HB3 H N N 402 TRP HD1 H N N 403 TRP HE1 H N N 404 TRP HE3 H N N 405 TRP HZ2 H N N 406 TRP HZ3 H N N 407 TRP HH2 H N N 408 TRP HXT H N N 409 TYR N N N N 410 TYR CA C N S 411 TYR C C N N 412 TYR O O N N 413 TYR CB C N N 414 TYR CG C Y N 415 TYR CD1 C Y N 416 TYR CD2 C Y N 417 TYR CE1 C Y N 418 TYR CE2 C Y N 419 TYR CZ C Y N 420 TYR OH O N N 421 TYR OXT O N N 422 TYR H H N N 423 TYR H2 H N N 424 TYR HA H N N 425 TYR HB2 H N N 426 TYR HB3 H N N 427 TYR HD1 H N N 428 TYR HD2 H N N 429 TYR HE1 H N N 430 TYR HE2 H N N 431 TYR HH H N N 432 TYR HXT H N N 433 VAL N N N N 434 VAL CA C N S 435 VAL C C N N 436 VAL O O N N 437 VAL CB C N N 438 VAL CG1 C N N 439 VAL CG2 C N N 440 VAL OXT O N N 441 VAL H H N N 442 VAL H2 H N N 443 VAL HA H N N 444 VAL HB H N N 445 VAL HG11 H N N 446 VAL HG12 H N N 447 VAL HG13 H N N 448 VAL HG21 H N N 449 VAL HG22 H N N 450 VAL HG23 H N N 451 VAL HXT H N N 452 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GNG "O5'" "C5'" sing N N 129 GNG "O5'" "H5'" sing N N 130 GNG "C5'" "C4'" sing N N 131 GNG "C5'" "H5'1" sing N N 132 GNG "C5'" "H5'2" sing N N 133 GNG "C4'" "O4'" sing N N 134 GNG "C4'" "C3'" sing N N 135 GNG "C4'" "H4'" sing N N 136 GNG "O4'" "C1'" sing N N 137 GNG "C1'" N9 sing N N 138 GNG "C1'" "C2'" sing N N 139 GNG "C1'" "H1'" sing N N 140 GNG N9 C8 sing Y N 141 GNG N9 C4 sing Y N 142 GNG C8 N7 doub Y N 143 GNG C8 H8 sing N N 144 GNG N7 C5 sing Y N 145 GNG C5 C4 doub Y N 146 GNG C5 C6 sing N N 147 GNG C4 N3 sing N N 148 GNG N3 C2 sing N N 149 GNG N3 HN3 sing N N 150 GNG C2 N1 doub N N 151 GNG C2 N2 sing N N 152 GNG N1 C6 sing N N 153 GNG C6 O6 doub N N 154 GNG N2 HN21 sing N N 155 GNG N2 HN22 sing N N 156 GNG "C2'" "C3'" sing N N 157 GNG "C2'" "H2'1" sing N N 158 GNG "C2'" "H2'2" sing N N 159 GNG "C3'" "O3'" sing N N 160 GNG "C3'" "H3'" sing N N 161 GNG "O3'" H1 sing N N 162 HIS N CA sing N N 163 HIS N H sing N N 164 HIS N H2 sing N N 165 HIS CA C sing N N 166 HIS CA CB sing N N 167 HIS CA HA sing N N 168 HIS C O doub N N 169 HIS C OXT sing N N 170 HIS CB CG sing N N 171 HIS CB HB2 sing N N 172 HIS CB HB3 sing N N 173 HIS CG ND1 sing Y N 174 HIS CG CD2 doub Y N 175 HIS ND1 CE1 doub Y N 176 HIS ND1 HD1 sing N N 177 HIS CD2 NE2 sing Y N 178 HIS CD2 HD2 sing N N 179 HIS CE1 NE2 sing Y N 180 HIS CE1 HE1 sing N N 181 HIS NE2 HE2 sing N N 182 HIS OXT HXT sing N N 183 HOH O H1 sing N N 184 HOH O H2 sing N N 185 ILE N CA sing N N 186 ILE N H sing N N 187 ILE N H2 sing N N 188 ILE CA C sing N N 189 ILE CA CB sing N N 190 ILE CA HA sing N N 191 ILE C O doub N N 192 ILE C OXT sing N N 193 ILE CB CG1 sing N N 194 ILE CB CG2 sing N N 195 ILE CB HB sing N N 196 ILE CG1 CD1 sing N N 197 ILE CG1 HG12 sing N N 198 ILE CG1 HG13 sing N N 199 ILE CG2 HG21 sing N N 200 ILE CG2 HG22 sing N N 201 ILE CG2 HG23 sing N N 202 ILE CD1 HD11 sing N N 203 ILE CD1 HD12 sing N N 204 ILE CD1 HD13 sing N N 205 ILE OXT HXT sing N N 206 LEU N CA sing N N 207 LEU N H sing N N 208 LEU N H2 sing N N 209 LEU CA C sing N N 210 LEU CA CB sing N N 211 LEU CA HA sing N N 212 LEU C O doub N N 213 LEU C OXT sing N N 214 LEU CB CG sing N N 215 LEU CB HB2 sing N N 216 LEU CB HB3 sing N N 217 LEU CG CD1 sing N N 218 LEU CG CD2 sing N N 219 LEU CG HG sing N N 220 LEU CD1 HD11 sing N N 221 LEU CD1 HD12 sing N N 222 LEU CD1 HD13 sing N N 223 LEU CD2 HD21 sing N N 224 LEU CD2 HD22 sing N N 225 LEU CD2 HD23 sing N N 226 LEU OXT HXT sing N N 227 LYS N CA sing N N 228 LYS N H sing N N 229 LYS N H2 sing N N 230 LYS CA C sing N N 231 LYS CA CB sing N N 232 LYS CA HA sing N N 233 LYS C O doub N N 234 LYS C OXT sing N N 235 LYS CB CG sing N N 236 LYS CB HB2 sing N N 237 LYS CB HB3 sing N N 238 LYS CG CD sing N N 239 LYS CG HG2 sing N N 240 LYS CG HG3 sing N N 241 LYS CD CE sing N N 242 LYS CD HD2 sing N N 243 LYS CD HD3 sing N N 244 LYS CE NZ sing N N 245 LYS CE HE2 sing N N 246 LYS CE HE3 sing N N 247 LYS NZ HZ1 sing N N 248 LYS NZ HZ2 sing N N 249 LYS NZ HZ3 sing N N 250 LYS OXT HXT sing N N 251 MET N CA sing N N 252 MET N H sing N N 253 MET N H2 sing N N 254 MET CA C sing N N 255 MET CA CB sing N N 256 MET CA HA sing N N 257 MET C O doub N N 258 MET C OXT sing N N 259 MET CB CG sing N N 260 MET CB HB2 sing N N 261 MET CB HB3 sing N N 262 MET CG SD sing N N 263 MET CG HG2 sing N N 264 MET CG HG3 sing N N 265 MET SD CE sing N N 266 MET CE HE1 sing N N 267 MET CE HE2 sing N N 268 MET CE HE3 sing N N 269 MET OXT HXT sing N N 270 NAG C1 C2 sing N N 271 NAG C1 O1 sing N N 272 NAG C1 O5 sing N N 273 NAG C1 H1 sing N N 274 NAG C2 C3 sing N N 275 NAG C2 N2 sing N N 276 NAG C2 H2 sing N N 277 NAG C3 C4 sing N N 278 NAG C3 O3 sing N N 279 NAG C3 H3 sing N N 280 NAG C4 C5 sing N N 281 NAG C4 O4 sing N N 282 NAG C4 H4 sing N N 283 NAG C5 C6 sing N N 284 NAG C5 O5 sing N N 285 NAG C5 H5 sing N N 286 NAG C6 O6 sing N N 287 NAG C6 H61 sing N N 288 NAG C6 H62 sing N N 289 NAG C7 C8 sing N N 290 NAG C7 N2 sing N N 291 NAG C7 O7 doub N N 292 NAG C8 H81 sing N N 293 NAG C8 H82 sing N N 294 NAG C8 H83 sing N N 295 NAG N2 HN2 sing N N 296 NAG O1 HO1 sing N N 297 NAG O3 HO3 sing N N 298 NAG O4 HO4 sing N N 299 NAG O6 HO6 sing N N 300 PHE N CA sing N N 301 PHE N H sing N N 302 PHE N H2 sing N N 303 PHE CA C sing N N 304 PHE CA CB sing N N 305 PHE CA HA sing N N 306 PHE C O doub N N 307 PHE C OXT sing N N 308 PHE CB CG sing N N 309 PHE CB HB2 sing N N 310 PHE CB HB3 sing N N 311 PHE CG CD1 doub Y N 312 PHE CG CD2 sing Y N 313 PHE CD1 CE1 sing Y N 314 PHE CD1 HD1 sing N N 315 PHE CD2 CE2 doub Y N 316 PHE CD2 HD2 sing N N 317 PHE CE1 CZ doub Y N 318 PHE CE1 HE1 sing N N 319 PHE CE2 CZ sing Y N 320 PHE CE2 HE2 sing N N 321 PHE CZ HZ sing N N 322 PHE OXT HXT sing N N 323 PRO N CA sing N N 324 PRO N CD sing N N 325 PRO N H sing N N 326 PRO CA C sing N N 327 PRO CA CB sing N N 328 PRO CA HA sing N N 329 PRO C O doub N N 330 PRO C OXT sing N N 331 PRO CB CG sing N N 332 PRO CB HB2 sing N N 333 PRO CB HB3 sing N N 334 PRO CG CD sing N N 335 PRO CG HG2 sing N N 336 PRO CG HG3 sing N N 337 PRO CD HD2 sing N N 338 PRO CD HD3 sing N N 339 PRO OXT HXT sing N N 340 SER N CA sing N N 341 SER N H sing N N 342 SER N H2 sing N N 343 SER CA C sing N N 344 SER CA CB sing N N 345 SER CA HA sing N N 346 SER C O doub N N 347 SER C OXT sing N N 348 SER CB OG sing N N 349 SER CB HB2 sing N N 350 SER CB HB3 sing N N 351 SER OG HG sing N N 352 SER OXT HXT sing N N 353 THR N CA sing N N 354 THR N H sing N N 355 THR N H2 sing N N 356 THR CA C sing N N 357 THR CA CB sing N N 358 THR CA HA sing N N 359 THR C O doub N N 360 THR C OXT sing N N 361 THR CB OG1 sing N N 362 THR CB CG2 sing N N 363 THR CB HB sing N N 364 THR OG1 HG1 sing N N 365 THR CG2 HG21 sing N N 366 THR CG2 HG22 sing N N 367 THR CG2 HG23 sing N N 368 THR OXT HXT sing N N 369 TRP N CA sing N N 370 TRP N H sing N N 371 TRP N H2 sing N N 372 TRP CA C sing N N 373 TRP CA CB sing N N 374 TRP CA HA sing N N 375 TRP C O doub N N 376 TRP C OXT sing N N 377 TRP CB CG sing N N 378 TRP CB HB2 sing N N 379 TRP CB HB3 sing N N 380 TRP CG CD1 doub Y N 381 TRP CG CD2 sing Y N 382 TRP CD1 NE1 sing Y N 383 TRP CD1 HD1 sing N N 384 TRP CD2 CE2 doub Y N 385 TRP CD2 CE3 sing Y N 386 TRP NE1 CE2 sing Y N 387 TRP NE1 HE1 sing N N 388 TRP CE2 CZ2 sing Y N 389 TRP CE3 CZ3 doub Y N 390 TRP CE3 HE3 sing N N 391 TRP CZ2 CH2 doub Y N 392 TRP CZ2 HZ2 sing N N 393 TRP CZ3 CH2 sing Y N 394 TRP CZ3 HZ3 sing N N 395 TRP CH2 HH2 sing N N 396 TRP OXT HXT sing N N 397 TYR N CA sing N N 398 TYR N H sing N N 399 TYR N H2 sing N N 400 TYR CA C sing N N 401 TYR CA CB sing N N 402 TYR CA HA sing N N 403 TYR C O doub N N 404 TYR C OXT sing N N 405 TYR CB CG sing N N 406 TYR CB HB2 sing N N 407 TYR CB HB3 sing N N 408 TYR CG CD1 doub Y N 409 TYR CG CD2 sing Y N 410 TYR CD1 CE1 sing Y N 411 TYR CD1 HD1 sing N N 412 TYR CD2 CE2 doub Y N 413 TYR CD2 HD2 sing N N 414 TYR CE1 CZ doub Y N 415 TYR CE1 HE1 sing N N 416 TYR CE2 CZ sing Y N 417 TYR CE2 HE2 sing N N 418 TYR CZ OH sing N N 419 TYR OH HH sing N N 420 TYR OXT HXT sing N N 421 VAL N CA sing N N 422 VAL N H sing N N 423 VAL N H2 sing N N 424 VAL CA C sing N N 425 VAL CA CB sing N N 426 VAL CA HA sing N N 427 VAL C O doub N N 428 VAL C OXT sing N N 429 VAL CB CG1 sing N N 430 VAL CB CG2 sing N N 431 VAL CB HB sing N N 432 VAL CG1 HG11 sing N N 433 VAL CG1 HG12 sing N N 434 VAL CG1 HG13 sing N N 435 VAL CG2 HG21 sing N N 436 VAL CG2 HG22 sing N N 437 VAL CG2 HG23 sing N N 438 VAL OXT HXT sing N N 439 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1JJ8 _pdbx_initial_refinement_model.details 'PDB entry 1JJ8' # _atom_sites.entry_id 2A8G _atom_sites.fract_transf_matrix[1][1] 0.014223 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012586 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023253 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_