HEADER OXIDOREDUCTASE 10-JUL-05 2A8X TITLE CRYSTAL STRUCTURE OF LIPOAMIDE DEHYDROGENASE FROM MYCOBACTERIUM TITLE 2 TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROLIPOYL DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LIPOAMIDE DEHYDROGENASE; E3 COMPONENT OF ALPHA KETO ACID COMPND 5 DEHYDROGENASE COMPLEXES; DIHYDROLIPOAMIDE DEHYDROGENASE; COMPND 6 EC: 1.8.1.4; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: RV0462, MT0478, LPDC; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: B834, DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET T7 KEYWDS LIPOAMIDE DEHYDROGENASE; PYRUVATE DEHYDROGENASE; ALPHA KETO ACID KEYWDS 2 DEHYDROGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR K.R.RAJASHANKAR,R.BRYK,R.KNIEWEL,J.A.BUGLINO,C.F.NATHAN,C.D.LIMA REVDAT 4 03-APR-24 2A8X 1 KEYWDS REMARK SEQADV LINK REVDAT 3 24-FEB-09 2A8X 1 VERSN REVDAT 2 25-OCT-05 2A8X 1 JRNL REVDAT 1 16-AUG-05 2A8X 0 JRNL AUTH K.R.RAJASHANKAR,R.BRYK,R.KNIEWEL,J.A.BUGLINO,C.F.NATHAN, JRNL AUTH 2 C.D.LIMA JRNL TITL CRYSTAL STRUCTURE AND FUNCTIONAL ANALYSIS OF LIPOAMIDE JRNL TITL 2 DEHYDROGENASE FROM MYCOBACTERIUM TUBERCULOSIS JRNL REF J.BIOL.CHEM. V. 280 33977 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 16093239 JRNL DOI 10.1074/JBC.M507466200 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 141899.280 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.7 REMARK 3 NUMBER OF REFLECTIONS : 69659 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3396 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.55 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 9982 REMARK 3 BIN R VALUE (WORKING SET) : 0.3590 REMARK 3 BIN FREE R VALUE : 0.3650 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 498 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.016 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6938 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 114 REMARK 3 SOLVENT ATOMS : 333 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.97000 REMARK 3 B22 (A**2) : 10.52000 REMARK 3 B33 (A**2) : -6.55000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM SIGMAA (A) : 0.53 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.54 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.790 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.150 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.910 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.960 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.910 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.33 REMARK 3 BSOL : 41.40 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : FAD_MPD.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : FAD_XPLOR.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2A8X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JUL-05. REMARK 100 THE DEPOSITION ID IS D_1000033634. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAY-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X9A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSING SI(111) REMARK 200 CRYSTALS REMARK 200 OPTICS : MIRRORS DOWN STREAM OF DOUBLE REMARK 200 CRYSTAL MONOCHROMATOR WITH REMARK 200 SAGITALLY FOCUSING SI(111) REMARK 200 CRYSTAL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72840 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 19.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 2.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09400 REMARK 200 FOR THE DATA SET : 9.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.46400 REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50% MPD, PH 7.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 279K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 41.79100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.44450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.33850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.44450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.79100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.33850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 46 CA - CB - SG ANGL. DEV. = 7.1 DEGREES REMARK 500 CYS B 46 CA - CB - SG ANGL. DEV. = 8.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 35 -78.90 -120.96 REMARK 500 VAL A 44 24.23 -149.18 REMARK 500 CYS A 46 -78.24 -32.22 REMARK 500 ASP A 252 46.85 76.87 REMARK 500 ALA A 266 56.38 -147.41 REMARK 500 ASP A 295 -2.56 -56.70 REMARK 500 GLN A 315 77.08 -69.82 REMARK 500 PHE A 350 43.88 -92.96 REMARK 500 ASP A 390 78.83 -162.09 REMARK 500 ASP A 415 45.11 34.40 REMARK 500 PRO A 421 -59.69 -29.64 REMARK 500 MSE A 461 -160.33 -72.52 REMARK 500 ILE A 462 -57.56 -135.11 REMARK 500 ASN A 463 41.63 -92.14 REMARK 500 LYS B 35 -78.77 -123.98 REMARK 500 VAL B 44 24.51 -140.64 REMARK 500 CYS B 46 -74.03 -38.17 REMARK 500 PHE B 62 15.11 -69.12 REMARK 500 THR B 63 -72.20 -128.90 REMARK 500 ALA B 179 43.09 -103.87 REMARK 500 ALA B 266 42.35 -147.45 REMARK 500 LEU B 314 81.26 -161.98 REMARK 500 GLN B 315 74.55 -56.29 REMARK 500 PHE B 350 33.31 -97.95 REMARK 500 LYS B 402 -79.06 -41.65 REMARK 500 ILE B 462 -71.05 -89.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 480 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD B 580 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 590 DBREF 2A8X A 1 464 UNP P66004 DLDH_MYCTU 1 464 DBREF 2A8X B 1 464 UNP P66004 DLDH_MYCTU 1 464 SEQADV 2A8X MSE A 1 UNP P66004 MET 1 MODIFIED RESIDUE SEQADV 2A8X MSE A 101 UNP P66004 MET 101 MODIFIED RESIDUE SEQADV 2A8X MSE A 184 UNP P66004 MET 184 MODIFIED RESIDUE SEQADV 2A8X MSE A 297 UNP P66004 MET 297 MODIFIED RESIDUE SEQADV 2A8X MSE A 344 UNP P66004 MET 344 MODIFIED RESIDUE SEQADV 2A8X MSE A 446 UNP P66004 MET 446 MODIFIED RESIDUE SEQADV 2A8X MSE A 461 UNP P66004 MET 461 MODIFIED RESIDUE SEQADV 2A8X MSE B 1 UNP P66004 MET 1 MODIFIED RESIDUE SEQADV 2A8X MSE B 101 UNP P66004 MET 101 MODIFIED RESIDUE SEQADV 2A8X MSE B 184 UNP P66004 MET 184 MODIFIED RESIDUE SEQADV 2A8X MSE B 297 UNP P66004 MET 297 MODIFIED RESIDUE SEQADV 2A8X MSE B 344 UNP P66004 MET 344 MODIFIED RESIDUE SEQADV 2A8X MSE B 446 UNP P66004 MET 446 MODIFIED RESIDUE SEQADV 2A8X MSE B 461 UNP P66004 MET 461 MODIFIED RESIDUE SEQRES 1 A 464 MSE THR HIS TYR ASP VAL VAL VAL LEU GLY ALA GLY PRO SEQRES 2 A 464 GLY GLY TYR VAL ALA ALA ILE ARG ALA ALA GLN LEU GLY SEQRES 3 A 464 LEU SER THR ALA ILE VAL GLU PRO LYS TYR TRP GLY GLY SEQRES 4 A 464 VAL CYS LEU ASN VAL GLY CYS ILE PRO SER LYS ALA LEU SEQRES 5 A 464 LEU ARG ASN ALA GLU LEU VAL HIS ILE PHE THR LYS ASP SEQRES 6 A 464 ALA LYS ALA PHE GLY ILE SER GLY GLU VAL THR PHE ASP SEQRES 7 A 464 TYR GLY ILE ALA TYR ASP ARG SER ARG LYS VAL ALA GLU SEQRES 8 A 464 GLY ARG VAL ALA GLY VAL HIS PHE LEU MSE LYS LYS ASN SEQRES 9 A 464 LYS ILE THR GLU ILE HIS GLY TYR GLY THR PHE ALA ASP SEQRES 10 A 464 ALA ASN THR LEU LEU VAL ASP LEU ASN ASP GLY GLY THR SEQRES 11 A 464 GLU SER VAL THR PHE ASP ASN ALA ILE ILE ALA THR GLY SEQRES 12 A 464 SER SER THR ARG LEU VAL PRO GLY THR SER LEU SER ALA SEQRES 13 A 464 ASN VAL VAL THR TYR GLU GLU GLN ILE LEU SER ARG GLU SEQRES 14 A 464 LEU PRO LYS SER ILE ILE ILE ALA GLY ALA GLY ALA ILE SEQRES 15 A 464 GLY MSE GLU PHE GLY TYR VAL LEU LYS ASN TYR GLY VAL SEQRES 16 A 464 ASP VAL THR ILE VAL GLU PHE LEU PRO ARG ALA LEU PRO SEQRES 17 A 464 ASN GLU ASP ALA ASP VAL SER LYS GLU ILE GLU LYS GLN SEQRES 18 A 464 PHE LYS LYS LEU GLY VAL THR ILE LEU THR ALA THR LYS SEQRES 19 A 464 VAL GLU SER ILE ALA ASP GLY GLY SER GLN VAL THR VAL SEQRES 20 A 464 THR VAL THR LYS ASP GLY VAL ALA GLN GLU LEU LYS ALA SEQRES 21 A 464 GLU LYS VAL LEU GLN ALA ILE GLY PHE ALA PRO ASN VAL SEQRES 22 A 464 GLU GLY TYR GLY LEU ASP LYS ALA GLY VAL ALA LEU THR SEQRES 23 A 464 ASP ARG LYS ALA ILE GLY VAL ASP ASP TYR MSE ARG THR SEQRES 24 A 464 ASN VAL GLY HIS ILE TYR ALA ILE GLY ASP VAL ASN GLY SEQRES 25 A 464 LEU LEU GLN LEU ALA HIS VAL ALA GLU ALA GLN GLY VAL SEQRES 26 A 464 VAL ALA ALA GLU THR ILE ALA GLY ALA GLU THR LEU THR SEQRES 27 A 464 LEU GLY ASP HIS ARG MSE LEU PRO ARG ALA THR PHE CYS SEQRES 28 A 464 GLN PRO ASN VAL ALA SER PHE GLY LEU THR GLU GLN GLN SEQRES 29 A 464 ALA ARG ASN GLU GLY TYR ASP VAL VAL VAL ALA LYS PHE SEQRES 30 A 464 PRO PHE THR ALA ASN ALA LYS ALA HIS GLY VAL GLY ASP SEQRES 31 A 464 PRO SER GLY PHE VAL LYS LEU VAL ALA ASP ALA LYS HIS SEQRES 32 A 464 GLY GLU LEU LEU GLY GLY HIS LEU VAL GLY HIS ASP VAL SEQRES 33 A 464 ALA GLU LEU LEU PRO GLU LEU THR LEU ALA GLN ARG TRP SEQRES 34 A 464 ASP LEU THR ALA SER GLU LEU ALA ARG ASN VAL HIS THR SEQRES 35 A 464 HIS PRO THR MSE SER GLU ALA LEU GLN GLU CYS PHE HIS SEQRES 36 A 464 GLY LEU VAL GLY HIS MSE ILE ASN PHE SEQRES 1 B 464 MSE THR HIS TYR ASP VAL VAL VAL LEU GLY ALA GLY PRO SEQRES 2 B 464 GLY GLY TYR VAL ALA ALA ILE ARG ALA ALA GLN LEU GLY SEQRES 3 B 464 LEU SER THR ALA ILE VAL GLU PRO LYS TYR TRP GLY GLY SEQRES 4 B 464 VAL CYS LEU ASN VAL GLY CYS ILE PRO SER LYS ALA LEU SEQRES 5 B 464 LEU ARG ASN ALA GLU LEU VAL HIS ILE PHE THR LYS ASP SEQRES 6 B 464 ALA LYS ALA PHE GLY ILE SER GLY GLU VAL THR PHE ASP SEQRES 7 B 464 TYR GLY ILE ALA TYR ASP ARG SER ARG LYS VAL ALA GLU SEQRES 8 B 464 GLY ARG VAL ALA GLY VAL HIS PHE LEU MSE LYS LYS ASN SEQRES 9 B 464 LYS ILE THR GLU ILE HIS GLY TYR GLY THR PHE ALA ASP SEQRES 10 B 464 ALA ASN THR LEU LEU VAL ASP LEU ASN ASP GLY GLY THR SEQRES 11 B 464 GLU SER VAL THR PHE ASP ASN ALA ILE ILE ALA THR GLY SEQRES 12 B 464 SER SER THR ARG LEU VAL PRO GLY THR SER LEU SER ALA SEQRES 13 B 464 ASN VAL VAL THR TYR GLU GLU GLN ILE LEU SER ARG GLU SEQRES 14 B 464 LEU PRO LYS SER ILE ILE ILE ALA GLY ALA GLY ALA ILE SEQRES 15 B 464 GLY MSE GLU PHE GLY TYR VAL LEU LYS ASN TYR GLY VAL SEQRES 16 B 464 ASP VAL THR ILE VAL GLU PHE LEU PRO ARG ALA LEU PRO SEQRES 17 B 464 ASN GLU ASP ALA ASP VAL SER LYS GLU ILE GLU LYS GLN SEQRES 18 B 464 PHE LYS LYS LEU GLY VAL THR ILE LEU THR ALA THR LYS SEQRES 19 B 464 VAL GLU SER ILE ALA ASP GLY GLY SER GLN VAL THR VAL SEQRES 20 B 464 THR VAL THR LYS ASP GLY VAL ALA GLN GLU LEU LYS ALA SEQRES 21 B 464 GLU LYS VAL LEU GLN ALA ILE GLY PHE ALA PRO ASN VAL SEQRES 22 B 464 GLU GLY TYR GLY LEU ASP LYS ALA GLY VAL ALA LEU THR SEQRES 23 B 464 ASP ARG LYS ALA ILE GLY VAL ASP ASP TYR MSE ARG THR SEQRES 24 B 464 ASN VAL GLY HIS ILE TYR ALA ILE GLY ASP VAL ASN GLY SEQRES 25 B 464 LEU LEU GLN LEU ALA HIS VAL ALA GLU ALA GLN GLY VAL SEQRES 26 B 464 VAL ALA ALA GLU THR ILE ALA GLY ALA GLU THR LEU THR SEQRES 27 B 464 LEU GLY ASP HIS ARG MSE LEU PRO ARG ALA THR PHE CYS SEQRES 28 B 464 GLN PRO ASN VAL ALA SER PHE GLY LEU THR GLU GLN GLN SEQRES 29 B 464 ALA ARG ASN GLU GLY TYR ASP VAL VAL VAL ALA LYS PHE SEQRES 30 B 464 PRO PHE THR ALA ASN ALA LYS ALA HIS GLY VAL GLY ASP SEQRES 31 B 464 PRO SER GLY PHE VAL LYS LEU VAL ALA ASP ALA LYS HIS SEQRES 32 B 464 GLY GLU LEU LEU GLY GLY HIS LEU VAL GLY HIS ASP VAL SEQRES 33 B 464 ALA GLU LEU LEU PRO GLU LEU THR LEU ALA GLN ARG TRP SEQRES 34 B 464 ASP LEU THR ALA SER GLU LEU ALA ARG ASN VAL HIS THR SEQRES 35 B 464 HIS PRO THR MSE SER GLU ALA LEU GLN GLU CYS PHE HIS SEQRES 36 B 464 GLY LEU VAL GLY HIS MSE ILE ASN PHE MODRES 2A8X MSE A 1 MET SELENOMETHIONINE MODRES 2A8X MSE A 101 MET SELENOMETHIONINE MODRES 2A8X MSE A 184 MET SELENOMETHIONINE MODRES 2A8X MSE A 297 MET SELENOMETHIONINE MODRES 2A8X MSE A 344 MET SELENOMETHIONINE MODRES 2A8X MSE A 446 MET SELENOMETHIONINE MODRES 2A8X MSE A 461 MET SELENOMETHIONINE MODRES 2A8X MSE B 1 MET SELENOMETHIONINE MODRES 2A8X MSE B 101 MET SELENOMETHIONINE MODRES 2A8X MSE B 184 MET SELENOMETHIONINE MODRES 2A8X MSE B 297 MET SELENOMETHIONINE MODRES 2A8X MSE B 344 MET SELENOMETHIONINE MODRES 2A8X MSE B 446 MET SELENOMETHIONINE MODRES 2A8X MSE B 461 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 101 8 HET MSE A 184 8 HET MSE A 297 8 HET MSE A 344 8 HET MSE A 446 8 HET MSE A 461 8 HET MSE B 1 8 HET MSE B 101 8 HET MSE B 184 8 HET MSE B 297 8 HET MSE B 344 8 HET MSE B 446 8 HET MSE B 461 8 HET FAD A 480 53 HET MPD A 590 8 HET FAD B 580 53 HETNAM MSE SELENOMETHIONINE HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 3 FAD 2(C27 H33 N9 O15 P2) FORMUL 4 MPD C6 H14 O2 FORMUL 6 HOH *333(H2 O) HELIX 1 1 GLY A 12 LEU A 25 1 14 HELIX 2 2 GLY A 38 GLY A 45 1 8 HELIX 3 3 GLY A 45 ALA A 66 1 22 HELIX 4 4 ASP A 78 ASN A 104 1 27 HELIX 5 5 THR A 160 LEU A 166 1 7 HELIX 6 6 GLY A 180 TYR A 193 1 14 HELIX 7 7 ASP A 211 GLY A 226 1 16 HELIX 8 8 GLY A 277 GLY A 282 1 6 HELIX 9 9 GLY A 308 GLY A 312 5 5 HELIX 10 10 LEU A 316 GLY A 333 1 18 HELIX 11 11 ASP A 341 LEU A 345 5 5 HELIX 12 12 THR A 361 GLU A 368 1 8 HELIX 13 13 ASN A 382 GLY A 389 1 8 HELIX 14 14 ASP A 415 GLU A 418 5 4 HELIX 15 15 LEU A 419 TRP A 429 1 11 HELIX 16 16 THR A 432 ALA A 437 1 6 HELIX 17 17 SER A 447 GLY A 459 1 13 HELIX 18 18 GLY B 12 LEU B 25 1 14 HELIX 19 19 GLY B 38 GLY B 45 1 8 HELIX 20 20 GLY B 45 ASP B 65 1 21 HELIX 21 21 ALA B 66 PHE B 69 5 4 HELIX 22 22 ASP B 78 ASN B 104 1 27 HELIX 23 23 THR B 160 LEU B 166 1 7 HELIX 24 24 GLY B 180 TYR B 193 1 14 HELIX 25 25 ASP B 211 GLY B 226 1 16 HELIX 26 26 GLY B 277 GLY B 282 1 6 HELIX 27 27 GLY B 308 GLY B 312 5 5 HELIX 28 28 LEU B 316 GLY B 333 1 18 HELIX 29 29 ASP B 341 LEU B 345 5 5 HELIX 30 30 THR B 361 GLY B 369 1 9 HELIX 31 31 ASN B 382 GLY B 389 1 8 HELIX 32 32 ASP B 415 GLU B 418 5 4 HELIX 33 33 LEU B 419 TRP B 429 1 11 HELIX 34 34 THR B 432 ARG B 438 1 7 HELIX 35 35 SER B 447 GLY B 459 1 13 SHEET 1 A 6 THR A 107 ILE A 109 0 SHEET 2 A 6 THR A 29 VAL A 32 1 N ILE A 31 O ILE A 109 SHEET 3 A 6 THR A 2 LEU A 9 1 N VAL A 8 O VAL A 32 SHEET 4 A 6 GLU A 131 ILE A 140 1 O ILE A 139 N LEU A 9 SHEET 5 A 6 THR A 120 LEU A 125 -1 N VAL A 123 O GLU A 131 SHEET 6 A 6 GLY A 111 PHE A 115 -1 N THR A 114 O LEU A 122 SHEET 1 B 5 THR A 107 ILE A 109 0 SHEET 2 B 5 THR A 29 VAL A 32 1 N ILE A 31 O ILE A 109 SHEET 3 B 5 THR A 2 LEU A 9 1 N VAL A 8 O VAL A 32 SHEET 4 B 5 GLU A 131 ILE A 140 1 O ILE A 139 N LEU A 9 SHEET 5 B 5 ILE A 304 ALA A 306 1 O TYR A 305 N ILE A 140 SHEET 1 C 2 ILE A 71 GLY A 73 0 SHEET 2 C 2 VAL B 75 PHE B 77 -1 O THR B 76 N SER A 72 SHEET 1 D 2 THR A 76 PHE A 77 0 SHEET 2 D 2 ILE B 71 SER B 72 -1 O SER B 72 N THR A 76 SHEET 1 E 2 SER A 144 THR A 146 0 SHEET 2 E 2 PHE A 269 PRO A 271 -1 O ALA A 270 N SER A 145 SHEET 1 F 5 VAL A 158 VAL A 159 0 SHEET 2 F 5 LYS A 262 GLN A 265 1 O GLN A 265 N VAL A 159 SHEET 3 F 5 SER A 173 ALA A 177 1 N ALA A 177 O LEU A 264 SHEET 4 F 5 ASP A 196 VAL A 200 1 O THR A 198 N ILE A 176 SHEET 5 F 5 THR A 228 LEU A 230 1 O THR A 228 N ILE A 199 SHEET 1 G 3 LYS A 234 ASP A 240 0 SHEET 2 G 3 VAL A 245 THR A 250 -1 O THR A 246 N ALA A 239 SHEET 3 G 3 ALA A 255 ALA A 260 -1 O LEU A 258 N VAL A 247 SHEET 1 H 5 ARG A 347 THR A 349 0 SHEET 2 H 5 ASN A 354 GLY A 359 -1 O VAL A 355 N THR A 349 SHEET 3 H 5 GLU A 405 GLY A 413 -1 O LEU A 411 N ALA A 356 SHEET 4 H 5 PHE A 394 ASP A 400 -1 N LYS A 396 O HIS A 410 SHEET 5 H 5 VAL A 372 PRO A 378 -1 N VAL A 373 O ALA A 399 SHEET 1 I 7 ILE B 304 ALA B 306 0 SHEET 2 I 7 GLU B 131 ILE B 140 1 N ILE B 140 O TYR B 305 SHEET 3 I 7 THR B 120 LEU B 125 -1 N VAL B 123 O GLU B 131 SHEET 4 I 7 THR B 107 ASP B 117 -1 N TYR B 112 O ASP B 124 SHEET 5 I 7 THR B 29 GLU B 33 1 N ILE B 31 O THR B 107 SHEET 6 I 7 THR B 2 LEU B 9 1 N VAL B 8 O VAL B 32 SHEET 7 I 7 GLU B 131 ILE B 140 1 O ILE B 139 N LEU B 9 SHEET 1 J 2 SER B 144 ARG B 147 0 SHEET 2 J 2 GLY B 268 PRO B 271 -1 O ALA B 270 N SER B 145 SHEET 1 K 5 VAL B 158 VAL B 159 0 SHEET 2 K 5 VAL B 263 GLN B 265 1 O GLN B 265 N VAL B 159 SHEET 3 K 5 SER B 173 ALA B 177 1 N ALA B 177 O LEU B 264 SHEET 4 K 5 ASP B 196 VAL B 200 1 O VAL B 200 N ILE B 176 SHEET 5 K 5 THR B 228 LEU B 230 1 O THR B 228 N ILE B 199 SHEET 1 L 3 LYS B 234 ASP B 240 0 SHEET 2 L 3 VAL B 245 LYS B 251 -1 O THR B 248 N GLU B 236 SHEET 3 L 3 VAL B 254 ALA B 260 -1 O ALA B 260 N VAL B 245 SHEET 1 M 5 ARG B 347 THR B 349 0 SHEET 2 M 5 ASN B 354 GLY B 359 -1 O VAL B 355 N THR B 349 SHEET 3 M 5 GLU B 405 GLY B 413 -1 O LEU B 411 N ALA B 356 SHEET 4 M 5 PHE B 394 ASP B 400 -1 N VAL B 398 O LEU B 407 SHEET 5 M 5 VAL B 372 PRO B 378 -1 N VAL B 373 O ALA B 399 SSBOND 1 CYS A 41 CYS A 46 1555 1555 2.05 SSBOND 2 CYS B 41 CYS B 46 1555 1555 2.05 LINK C MSE A 1 N THR A 2 1555 1555 1.33 LINK C LEU A 100 N MSE A 101 1555 1555 1.33 LINK C MSE A 101 N LYS A 102 1555 1555 1.33 LINK C GLY A 183 N MSE A 184 1555 1555 1.33 LINK C MSE A 184 N GLU A 185 1555 1555 1.33 LINK C TYR A 296 N MSE A 297 1555 1555 1.33 LINK C MSE A 297 N ARG A 298 1555 1555 1.33 LINK C ARG A 343 N MSE A 344 1555 1555 1.33 LINK C MSE A 344 N LEU A 345 1555 1555 1.33 LINK C THR A 445 N MSE A 446 1555 1555 1.33 LINK C MSE A 446 N SER A 447 1555 1555 1.33 LINK C HIS A 460 N MSE A 461 1555 1555 1.33 LINK C MSE A 461 N ILE A 462 1555 1555 1.33 LINK C MSE B 1 N THR B 2 1555 1555 1.33 LINK C LEU B 100 N MSE B 101 1555 1555 1.33 LINK C MSE B 101 N LYS B 102 1555 1555 1.33 LINK C GLY B 183 N MSE B 184 1555 1555 1.33 LINK C MSE B 184 N GLU B 185 1555 1555 1.33 LINK C TYR B 296 N MSE B 297 1555 1555 1.33 LINK C MSE B 297 N ARG B 298 1555 1555 1.33 LINK C ARG B 343 N MSE B 344 1555 1555 1.33 LINK C MSE B 344 N LEU B 345 1555 1555 1.33 LINK C THR B 445 N MSE B 446 1555 1555 1.33 LINK C MSE B 446 N SER B 447 1555 1555 1.33 LINK C HIS B 460 N MSE B 461 1555 1555 1.33 LINK C MSE B 461 N ILE B 462 1555 1555 1.33 CISPEP 1 GLN A 352 PRO A 353 0 -0.77 CISPEP 2 HIS A 443 PRO A 444 0 0.26 CISPEP 3 GLN B 352 PRO B 353 0 -0.15 CISPEP 4 HIS B 443 PRO B 444 0 -0.25 SITE 1 AC1 37 LEU A 9 GLY A 10 GLY A 12 PRO A 13 SITE 2 AC1 37 GLY A 14 VAL A 32 GLU A 33 PRO A 34 SITE 3 AC1 37 TYR A 36 GLY A 39 VAL A 40 CYS A 41 SITE 4 AC1 37 GLY A 45 CYS A 46 LYS A 50 TYR A 112 SITE 5 AC1 37 GLY A 113 ALA A 141 THR A 142 GLY A 143 SITE 6 AC1 37 TYR A 161 ILE A 182 TYR A 276 GLY A 308 SITE 7 AC1 37 ASP A 309 GLN A 315 LEU A 316 ALA A 317 SITE 8 AC1 37 HIS A 318 HOH A 591 HOH A 594 HOH A 599 SITE 9 AC1 37 HOH A 609 HOH A 658 HOH A 729 HIS B 443 SITE 10 AC1 37 PRO B 444 SITE 1 AC2 38 HIS A 443 PRO A 444 LEU B 9 GLY B 10 SITE 2 AC2 38 GLY B 12 PRO B 13 GLY B 14 VAL B 32 SITE 3 AC2 38 GLU B 33 PRO B 34 TYR B 36 GLY B 39 SITE 4 AC2 38 VAL B 40 CYS B 41 GLY B 45 CYS B 46 SITE 5 AC2 38 LYS B 50 TYR B 112 GLY B 113 ALA B 141 SITE 6 AC2 38 THR B 142 GLY B 143 TYR B 161 ILE B 182 SITE 7 AC2 38 TYR B 276 GLY B 308 ASP B 309 GLN B 315 SITE 8 AC2 38 LEU B 316 ALA B 317 HIS B 318 PHE B 350 SITE 9 AC2 38 HOH B 583 HOH B 604 HOH B 630 HOH B 635 SITE 10 AC2 38 HOH B 657 HOH B 702 SITE 1 AC3 6 TYR A 16 ARG A 93 GLY A 96 LEU A 100 SITE 2 AC3 6 ALA B 381 ASN B 463 CRYST1 83.582 96.677 122.889 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011964 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010344 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008137 0.00000 HETATM 1 N MSE A 1 -30.375 11.923 -4.443 1.00 65.22 N HETATM 2 CA MSE A 1 -30.059 10.485 -4.687 1.00 64.95 C HETATM 3 C MSE A 1 -28.730 10.107 -4.029 1.00 61.75 C HETATM 4 O MSE A 1 -27.733 9.902 -4.724 1.00 62.41 O HETATM 5 CB MSE A 1 -29.964 10.210 -6.191 1.00 68.51 C HETATM 6 CG MSE A 1 -30.006 8.726 -6.532 1.00 74.43 C HETATM 7 SE MSE A 1 -29.037 8.218 -8.134 1.00 83.25 SE HETATM 8 CE MSE A 1 -27.666 7.124 -7.299 1.00 79.08 C