HEADER IMMUNE SYSTEM 20-JUL-05 2ADI TITLE CRYSTAL STRUCTURE OF MONOCLONAL ANTI-CD4 ANTIBODY Q425 IN COMPLEX WITH TITLE 2 BARIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: Q425 FAB LIGHT CHAIN; COMPND 3 CHAIN: A; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: Q425 FAB HEAVY CHAIN; COMPND 6 CHAIN: B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 OTHER_DETAILS: HYBRIDOMA; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 8 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 9 ORGANISM_TAXID: 10090; SOURCE 10 OTHER_DETAILS: HYBRIDOMA KEYWDS ANTI-CD4, INTERFACIAL METAL, ANTIBODY RECOGNITION, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR T.ZHOU,D.H.HAMER,W.A.HENDRICKSON,Q.J.SATTENTAU,P.D.KWONG REVDAT 7 30-OCT-24 2ADI 1 REMARK REVDAT 6 23-AUG-23 2ADI 1 REMARK LINK REVDAT 5 22-MAY-19 2ADI 1 REMARK REVDAT 4 11-OCT-17 2ADI 1 REMARK REVDAT 3 24-FEB-09 2ADI 1 VERSN REVDAT 2 18-OCT-05 2ADI 1 JRNL REVDAT 1 20-SEP-05 2ADI 0 JRNL AUTH T.ZHOU,D.H.HAMER,W.A.HENDRICKSON,Q.J.SATTENTAU,P.D.KWONG JRNL TITL INTERFACIAL METAL AND ANTIBODY RECOGNITION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 102 14575 2005 JRNL REFN ISSN 0027-8424 JRNL PMID 16195378 JRNL DOI 10.1073/PNAS.0507267102 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 9.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 5893044.070 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 12855 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 658 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.010 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.97 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1757 REMARK 3 BIN R VALUE (WORKING SET) : 0.3730 REMARK 3 BIN FREE R VALUE : 0.3880 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 84 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.042 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3268 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 30 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.09000 REMARK 3 B22 (A**2) : -0.09000 REMARK 3 B33 (A**2) : 0.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM SIGMAA (A) : 0.76 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.45 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.92 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 26.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.910 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.380 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.470 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.730 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.830 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.25 REMARK 3 BSOL : 16.09 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : BA.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : BA.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2ADI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JUL-05. REMARK 100 THE DEPOSITION ID IS D_1000033767. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JAN-94 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : XUONG-HAMLIN MULTIWIRE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XUONG-HAMLIN (DETECTOR SYSTEM) REMARK 200 DATA SCALING SOFTWARE : CCP4 (AGROVATA, ROTAVATA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12858 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 10.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.13000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 2ADG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000, SODIUM ACETATE, BARIUM, PH REMARK 280 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.15000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 48.60000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 48.60000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 82.72500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 48.60000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 48.60000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 27.57500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 48.60000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.60000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 82.72500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 48.60000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.60000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 27.57500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 55.15000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: HETERODIMER OF HEAVY AND LIGHT CHAIN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 212 REMARK 465 GLU A 213 REMARK 465 CYS A 214 REMARK 465 SER B 128 REMARK 465 ALA B 129 REMARK 465 ALA B 130 REMARK 465 GLN B 131 REMARK 465 THR B 132 REMARK 465 ASN B 133 REMARK 465 ASP B 214 REMARK 465 CYS B 215 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 126 C - N - CA ANGL. DEV. = 10.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 30 -93.32 67.99 REMARK 500 ASP A 31 32.55 -154.22 REMARK 500 THR A 69 -14.34 -143.47 REMARK 500 VAL A 83 98.57 -67.81 REMARK 500 ASP A 110 155.15 -44.61 REMARK 500 PRO A 120 151.17 -39.66 REMARK 500 SER A 127 -2.05 -57.32 REMARK 500 TYR A 140 140.18 -172.70 REMARK 500 ARG A 155 129.87 -177.54 REMARK 500 SER A 171 19.07 58.27 REMARK 500 LEU A 181 143.31 174.37 REMARK 500 ARG A 188 48.18 -83.09 REMARK 500 ASN A 190 -54.94 -133.03 REMARK 500 THR A 202 -96.00 -81.45 REMARK 500 THR B 28 92.19 -68.99 REMARK 500 SER B 30 37.53 -80.78 REMARK 500 GLU B 85 5.19 -64.26 REMARK 500 ALA B 88 171.94 172.07 REMARK 500 ASN B 99 -64.34 -125.72 REMARK 500 TRP B 100 140.63 -171.82 REMARK 500 ASN B 100A -155.11 -163.35 REMARK 500 TYR B 100B -177.48 -69.59 REMARK 500 ALA B 114 142.42 -38.24 REMARK 500 THR B 117 118.77 -176.02 REMARK 500 PRO B 126 -86.30 -27.58 REMARK 500 PHE B 146 142.25 -177.14 REMARK 500 SER B 172 -69.65 162.94 REMARK 500 ASP B 173 31.58 -166.80 REMARK 500 THR B 187 12.98 -68.70 REMARK 500 SER B 203 50.44 35.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BA A2000 BA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 32 OD1 REMARK 620 2 GLU A 50 OE1 63.2 REMARK 620 3 GLU A 50 OE2 56.0 36.6 REMARK 620 4 SER A 91 O 94.6 75.7 111.8 REMARK 620 5 HOH A2001 O 92.0 63.1 39.2 129.3 REMARK 620 6 HOH A2010 O 133.1 140.2 170.6 67.7 133.3 REMARK 620 7 HOH A2013 O 74.9 134.6 125.8 91.9 138.1 63.4 REMARK 620 8 ASN B 100A OD1 128.0 69.9 73.2 94.4 45.5 97.4 155.4 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BA A 2000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS A 700 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ADG RELATED DB: PDB REMARK 900 RELATED ID: 2ADJ RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE THE SEQUENCE OF FAB PROTEIN IS NOT AVAILABLE AT GENBANK REMARK 999 OR SWS SEQUENCE DATABASE AT THE TIME OF PROCESSING. DBREF 2ADI A 1 214 PDB 2ADI 2ADI 1 214 DBREF 2ADI B 1 215 PDB 2ADI 2ADI 1 215 SEQRES 1 A 214 GLU THR THR VAL THR GLN SER PRO ALA SER LEU SER VAL SEQRES 2 A 214 ALA ILE GLY GLU LYS VAL THR ILE ARG CYS ILE THR SER SEQRES 3 A 214 THR ASP ILE ASP ASP ASP MET ASN TRP TYR GLN GLN LYS SEQRES 4 A 214 PRO GLY GLU PRO PRO LYS PHE PHE ILE SER GLU GLY ASN SEQRES 5 A 214 THR LEU ARG PRO GLY VAL PRO SER ARG PHE SER SER SER SEQRES 6 A 214 GLY TYR GLY THR ASP PHE VAL PHE THR ILE GLU ASN MET SEQRES 7 A 214 LEU SER GLU ASP VAL ALA ASP TYR TYR CYS LEU GLN SER SEQRES 8 A 214 ASP THR LEU PRO LEU THR PHE GLY SER GLY THR LYS LEU SEQRES 9 A 214 GLU ILE LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE SEQRES 10 A 214 PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SEQRES 11 A 214 SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP SEQRES 12 A 214 ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN SEQRES 13 A 214 ASN GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS SEQRES 14 A 214 ASP SER THR TYR SER MET SER SER THR LEU THR LEU THR SEQRES 15 A 214 LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU SEQRES 16 A 214 ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER SEQRES 17 A 214 PHE ASN ARG ASN GLU CYS SEQRES 1 B 222 GLU VAL GLN LEU VAL GLU SER GLY GLY ASP LEU VAL LYS SEQRES 2 B 222 PRO GLY GLY SER LEU LYS LEU SER CYS ALA ALA SER GLY SEQRES 3 B 222 PHE THR PHE SER SER TYR GLY MET SER TRP VAL ARG GLN SEQRES 4 B 222 THR PRO ASP LYS GLY LEU GLU TRP VAL ALA THR ILE SER SEQRES 5 B 222 SER GLY GLY SER TYR THR TYR TYR PRO ASP ASN VAL LYS SEQRES 6 B 222 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 B 222 LEU TYR LEU GLN MET SER SER LEU LYS SER GLU ASP THR SEQRES 8 B 222 ALA MET TYR TYR CYS ALA ARG HIS GLU ASP GLY ASN TRP SEQRES 9 B 222 ASN TYR PHE ASP TYR TRP GLY GLN GLY THR THR LEU THR SEQRES 10 B 222 VAL SER SER ALA LYS THR THR PRO PRO SER VAL TYR PRO SEQRES 11 B 222 LEU ALA PRO GLY SER ALA ALA GLN THR ASN SER MET VAL SEQRES 12 B 222 THR LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO SEQRES 13 B 222 VAL THR VAL THR TRP ASN SER GLY SER LEU SER SER GLY SEQRES 14 B 222 VAL HIS THR PHE PRO ALA VAL LEU GLN SER ASP LEU TYR SEQRES 15 B 222 THR LEU SER SER SER VAL THR VAL PRO SER SER THR TRP SEQRES 16 B 222 PRO SER GLU THR VAL THR CYS ASN VAL ALA HIS PRO ALA SEQRES 17 B 222 SER SER THR LYS VAL ASP LYS LYS ILE VAL PRO ARG ASP SEQRES 18 B 222 CYS HET BA A2000 1 HET TRS A 700 8 HETNAM BA BARIUM ION HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN TRS TRIS BUFFER FORMUL 3 BA BA 2+ FORMUL 4 TRS C4 H12 N O3 1+ FORMUL 5 HOH *30(H2 O) HELIX 1 1 LEU A 79 VAL A 83 5 5 HELIX 2 2 SER A 121 SER A 127 1 7 HELIX 3 3 LYS A 183 ARG A 188 1 6 HELIX 4 4 THR B 28 TYR B 32 5 5 HELIX 5 5 LYS B 83 THR B 87 5 5 HELIX 6 6 SER B 156 SER B 158 5 3 HELIX 7 7 PRO B 200 SER B 203 5 4 SHEET 1 A 4 VAL A 4 SER A 7 0 SHEET 2 A 4 VAL A 19 THR A 25 -1 O ILE A 24 N THR A 5 SHEET 3 A 4 ASP A 70 ILE A 75 -1 O PHE A 73 N ILE A 21 SHEET 4 A 4 PHE A 62 TYR A 67 -1 N SER A 65 O VAL A 72 SHEET 1 B 6 SER A 10 VAL A 13 0 SHEET 2 B 6 THR A 102 ILE A 106 1 O LYS A 103 N LEU A 11 SHEET 3 B 6 ASP A 85 GLN A 90 -1 N TYR A 86 O THR A 102 SHEET 4 B 6 MET A 33 GLN A 38 -1 N ASN A 34 O LEU A 89 SHEET 5 B 6 LYS A 45 SER A 49 -1 O LYS A 45 N GLN A 37 SHEET 6 B 6 THR A 53 LEU A 54 -1 O THR A 53 N SER A 49 SHEET 1 C 4 SER A 10 VAL A 13 0 SHEET 2 C 4 THR A 102 ILE A 106 1 O LYS A 103 N LEU A 11 SHEET 3 C 4 ASP A 85 GLN A 90 -1 N TYR A 86 O THR A 102 SHEET 4 C 4 THR A 97 PHE A 98 -1 O THR A 97 N GLN A 90 SHEET 1 D 4 THR A 114 PHE A 118 0 SHEET 2 D 4 GLY A 129 PHE A 139 -1 O PHE A 135 N SER A 116 SHEET 3 D 4 TYR A 173 THR A 182 -1 O TYR A 173 N PHE A 139 SHEET 4 D 4 VAL A 159 TRP A 163 -1 N SER A 162 O SER A 176 SHEET 1 E 3 ILE A 144 ILE A 150 0 SHEET 2 E 3 TYR A 192 HIS A 198 -1 O THR A 197 N ASN A 145 SHEET 3 E 3 ILE A 205 PHE A 209 -1 O ILE A 205 N ALA A 196 SHEET 1 F 4 GLN B 3 SER B 7 0 SHEET 2 F 4 SER B 17 SER B 25 -1 O SER B 21 N SER B 7 SHEET 3 F 4 THR B 78 SER B 82B-1 O MET B 82A N LEU B 18 SHEET 4 F 4 PHE B 68 ASP B 73 -1 N ASP B 73 O THR B 78 SHEET 1 G 6 LEU B 11 VAL B 12 0 SHEET 2 G 6 THR B 107 VAL B 111 1 O THR B 110 N VAL B 12 SHEET 3 G 6 ALA B 88 HIS B 95 -1 N TYR B 90 O THR B 107 SHEET 4 G 6 MET B 34 THR B 40 -1 N SER B 35 O ALA B 93 SHEET 5 G 6 GLY B 44 ILE B 51 -1 O GLU B 46 N ARG B 38 SHEET 6 G 6 THR B 58 TYR B 59 -1 O TYR B 59 N THR B 50 SHEET 1 H 4 LEU B 11 VAL B 12 0 SHEET 2 H 4 THR B 107 VAL B 111 1 O THR B 110 N VAL B 12 SHEET 3 H 4 ALA B 88 HIS B 95 -1 N TYR B 90 O THR B 107 SHEET 4 H 4 PHE B 100C TRP B 103 -1 O TYR B 102 N ARG B 94 SHEET 1 I 4 SER B 120 LEU B 124 0 SHEET 2 I 4 THR B 137 TYR B 145 -1 O GLY B 139 N LEU B 124 SHEET 3 I 4 TYR B 175 THR B 182 -1 O VAL B 181 N LEU B 138 SHEET 4 I 4 HIS B 164 LEU B 170 -1 N HIS B 164 O SER B 180 SHEET 1 J 3 THR B 151 TRP B 154 0 SHEET 2 J 3 THR B 194 HIS B 199 -1 O ASN B 196 N THR B 153 SHEET 3 J 3 THR B 204 LYS B 209 -1 O THR B 204 N HIS B 199 SSBOND 1 CYS A 23 CYS A 88 1555 1555 2.03 SSBOND 2 CYS A 134 CYS A 194 1555 1555 2.03 SSBOND 3 CYS B 22 CYS B 92 1555 1555 2.02 SSBOND 4 CYS B 140 CYS B 195 1555 1555 2.03 LINK OD1 ASP A 32 BA BA A2000 1555 1555 3.38 LINK OE1 GLU A 50 BA BA A2000 1555 1555 2.91 LINK OE2 GLU A 50 BA BA A2000 1555 1555 3.68 LINK O SER A 91 BA BA A2000 1555 1555 2.95 LINK BA BA A2000 O HOH A2001 1555 1555 2.82 LINK BA BA A2000 O HOH A2010 1555 1555 2.64 LINK BA BA A2000 O HOH A2013 1555 1555 3.23 LINK BA BA A2000 OD1 ASN B 100A 1555 1555 3.40 CISPEP 1 SER A 7 PRO A 8 0 -0.25 CISPEP 2 LEU A 94 PRO A 95 0 -0.01 CISPEP 3 TYR A 140 PRO A 141 0 0.27 CISPEP 4 PHE B 146 PRO B 147 0 0.14 CISPEP 5 GLU B 148 PRO B 149 0 -0.28 CISPEP 6 TRP B 188 PRO B 189 0 -0.17 SITE 1 AC1 6 ASP A 32 GLU A 50 SER A 91 HOH A2001 SITE 2 AC1 6 HOH A2010 ASN B 100A SITE 1 AC2 4 ASP A 28 ASP A 30 ASP A 92 THR A 93 CRYST1 97.200 97.200 110.300 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010288 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010288 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009066 0.00000