data_2ANN # _entry.id 2ANN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2ANN pdb_00002ann 10.2210/pdb2ann/pdb NDB PR0172 ? ? RCSB RCSB034103 ? ? WWPDB D_1000034103 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-10-24 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-11-02 5 'Structure model' 1 4 2017-10-11 6 'Structure model' 1 5 2021-02-03 7 'Structure model' 1 6 2021-10-20 8 'Structure model' 1 7 2023-08-23 9 'Structure model' 1 8 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 5 'Structure model' 'Refinement description' 6 6 'Structure model' 'Database references' 7 6 'Structure model' 'Derived calculations' 8 6 'Structure model' 'Structure summary' 9 7 'Structure model' 'Database references' 10 8 'Structure model' 'Data collection' 11 8 'Structure model' 'Refinement description' 12 9 'Structure model' 'Database references' 13 9 'Structure model' 'Source and taxonomy' 14 9 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' software 2 6 'Structure model' audit_author 3 6 'Structure model' citation_author 4 6 'Structure model' pdbx_struct_conn_angle 5 6 'Structure model' struct_conn 6 6 'Structure model' struct_ref_seq_dif 7 6 'Structure model' struct_site 8 7 'Structure model' database_2 9 7 'Structure model' struct_ref_seq_dif 10 8 'Structure model' chem_comp_atom 11 8 'Structure model' chem_comp_bond 12 8 'Structure model' pdbx_initial_refinement_model 13 9 'Structure model' entity 14 9 'Structure model' entity_name_com 15 9 'Structure model' entity_src_gen 16 9 'Structure model' pdbx_entity_src_syn 17 9 'Structure model' struct_ref 18 9 'Structure model' struct_ref_seq 19 9 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_audit_author.identifier_ORCID' 2 6 'Structure model' '_citation_author.identifier_ORCID' 3 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 6 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 10 6 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 11 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 6 'Structure model' '_pdbx_struct_conn_angle.value' 18 6 'Structure model' '_struct_conn.pdbx_dist_value' 19 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 29 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 30 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 31 6 'Structure model' '_struct_ref_seq_dif.details' 32 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 33 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 34 6 'Structure model' '_struct_site.pdbx_auth_seq_id' 35 7 'Structure model' '_database_2.pdbx_DOI' 36 7 'Structure model' '_database_2.pdbx_database_accession' 37 7 'Structure model' '_struct_ref_seq_dif.details' 38 9 'Structure model' '_entity.pdbx_description' 39 9 'Structure model' '_entity.pdbx_mutation' 40 9 'Structure model' '_entity_name_com.name' 41 9 'Structure model' '_entity_src_gen.gene_src_common_name' 42 9 'Structure model' '_entity_src_gen.pdbx_beg_seq_num' 43 9 'Structure model' '_entity_src_gen.pdbx_end_seq_num' 44 9 'Structure model' '_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id' 45 9 'Structure model' '_entity_src_gen.pdbx_gene_src_scientific_name' 46 9 'Structure model' '_entity_src_gen.pdbx_seq_type' 47 9 'Structure model' '_struct_ref.db_code' 48 9 'Structure model' '_struct_ref.db_name' 49 9 'Structure model' '_struct_ref.entity_id' 50 9 'Structure model' '_struct_ref.pdbx_align_begin' 51 9 'Structure model' '_struct_ref.pdbx_db_accession' 52 9 'Structure model' '_struct_ref.pdbx_seq_one_letter_code' 53 9 'Structure model' '_struct_ref_seq.db_align_beg' 54 9 'Structure model' '_struct_ref_seq.db_align_end' 55 9 'Structure model' '_struct_ref_seq.pdbx_auth_seq_align_beg' 56 9 'Structure model' '_struct_ref_seq.pdbx_auth_seq_align_end' 57 9 'Structure model' '_struct_ref_seq.pdbx_db_accession' 58 9 'Structure model' '_struct_ref_seq.pdbx_strand_id' 59 9 'Structure model' '_struct_ref_seq.seq_align_beg' 60 9 'Structure model' '_struct_ref_seq.seq_align_end' # _pdbx_database_status.entry_id 2ANN _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2005-08-11 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2ANR _pdbx_database_related.details 'Crystal structure (II) of KH1/KH2 domain tandem with 25 nt RNA hairpin.' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Malinina, L.' 1 ? 'Teplova, M.' 2 ? 'Musunuru, K.' 3 ? 'Teplov, A.' 4 ? 'Darnell, J.C.' 5 ? 'Burley, S.K.' 6 0000-0002-2487-9713 'Darnell, R.B.' 7 ? 'Patel, D.J.' 8 ? # _citation.id primary _citation.title 'Protein-RNA and protein-protein recognition by dual KH1/2 domains of the neuronal splicing factor Nova-1.' _citation.journal_abbrev Structure _citation.journal_volume 19 _citation.page_first 930 _citation.page_last 944 _citation.year 2011 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21742260 _citation.pdbx_database_id_DOI 10.1016/j.str.2011.05.002 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Teplova, M.' 1 ? primary 'Malinina, L.' 2 ? primary 'Darnell, J.C.' 3 ? primary 'Song, J.' 4 ? primary 'Lu, M.' 5 ? primary 'Abagyan, R.' 6 ? primary 'Musunuru, K.' 7 ? primary 'Teplov, A.' 8 ? primary 'Burley, S.K.' 9 0000-0002-2487-9713 primary 'Darnell, R.B.' 10 ? primary 'Patel, D.J.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(*CP*GP*CP*GP*CP*GP*GP*AP*UP*CP*AP*GP*UP*CP*AP*CP*CP*CP*AP*AP*GP*CP*GP*CP*G)-3'" 8026.867 1 ? ? ? ? 2 polymer man 'RNA-binding protein Nova-1' 19189.047 1 ? E218N 'KH1/KH2 domains' ? 3 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 5 water nat water 18.015 77 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'Neuro-oncological ventral antigen 1,Ventral neuron-specific protein 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no CGCGCGGAUCAGUCACCCAAGCGCG CGCGCGGAUCAGUCACCCAAGCGCG B ? 2 'polypeptide(L)' no no ;PLGSQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMP QNVAKTEPVSILQPQTTVNPDRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQNRVVTVSGEPE QNRKAVELIIQKIQEDPQ ; ;PLGSQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMP QNVAKTEPVSILQPQTTVNPDRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQNRVVTVSGEPE QNRKAVELIIQKIQEDPQ ; A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'POTASSIUM ION' K 4 'MAGNESIUM ION' MG 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 G n 1 3 C n 1 4 G n 1 5 C n 1 6 G n 1 7 G n 1 8 A n 1 9 U n 1 10 C n 1 11 A n 1 12 G n 1 13 U n 1 14 C n 1 15 A n 1 16 C n 1 17 C n 1 18 C n 1 19 A n 1 20 A n 1 21 G n 1 22 C n 1 23 G n 1 24 C n 1 25 G n 2 1 PRO n 2 2 LEU n 2 3 GLY n 2 4 SER n 2 5 GLN n 2 6 TYR n 2 7 PHE n 2 8 LEU n 2 9 LYS n 2 10 VAL n 2 11 LEU n 2 12 ILE n 2 13 PRO n 2 14 SER n 2 15 TYR n 2 16 ALA n 2 17 ALA n 2 18 GLY n 2 19 SER n 2 20 ILE n 2 21 ILE n 2 22 GLY n 2 23 LYS n 2 24 GLY n 2 25 GLY n 2 26 GLN n 2 27 THR n 2 28 ILE n 2 29 VAL n 2 30 GLN n 2 31 LEU n 2 32 GLN n 2 33 LYS n 2 34 GLU n 2 35 THR n 2 36 GLY n 2 37 ALA n 2 38 THR n 2 39 ILE n 2 40 LYS n 2 41 LEU n 2 42 SER n 2 43 LYS n 2 44 SER n 2 45 LYS n 2 46 ASP n 2 47 PHE n 2 48 TYR n 2 49 PRO n 2 50 GLY n 2 51 THR n 2 52 THR n 2 53 GLU n 2 54 ARG n 2 55 VAL n 2 56 CYS n 2 57 LEU n 2 58 ILE n 2 59 GLN n 2 60 GLY n 2 61 THR n 2 62 ILE n 2 63 GLU n 2 64 ALA n 2 65 LEU n 2 66 ASN n 2 67 ALA n 2 68 VAL n 2 69 HIS n 2 70 GLY n 2 71 PHE n 2 72 ILE n 2 73 ALA n 2 74 GLU n 2 75 LYS n 2 76 ILE n 2 77 ARG n 2 78 GLU n 2 79 MET n 2 80 PRO n 2 81 GLN n 2 82 ASN n 2 83 VAL n 2 84 ALA n 2 85 LYS n 2 86 THR n 2 87 GLU n 2 88 PRO n 2 89 VAL n 2 90 SER n 2 91 ILE n 2 92 LEU n 2 93 GLN n 2 94 PRO n 2 95 GLN n 2 96 THR n 2 97 THR n 2 98 VAL n 2 99 ASN n 2 100 PRO n 2 101 ASP n 2 102 ARG n 2 103 ALA n 2 104 ASN n 2 105 GLN n 2 106 VAL n 2 107 LYS n 2 108 ILE n 2 109 ILE n 2 110 VAL n 2 111 PRO n 2 112 ASN n 2 113 SER n 2 114 THR n 2 115 ALA n 2 116 GLY n 2 117 LEU n 2 118 ILE n 2 119 ILE n 2 120 GLY n 2 121 LYS n 2 122 GLY n 2 123 GLY n 2 124 ALA n 2 125 THR n 2 126 VAL n 2 127 LYS n 2 128 ALA n 2 129 ILE n 2 130 MET n 2 131 GLU n 2 132 GLN n 2 133 SER n 2 134 GLY n 2 135 ALA n 2 136 TRP n 2 137 VAL n 2 138 GLN n 2 139 LEU n 2 140 SER n 2 141 GLN n 2 142 LYS n 2 143 PRO n 2 144 ASP n 2 145 GLY n 2 146 ILE n 2 147 ASN n 2 148 LEU n 2 149 GLN n 2 150 ASN n 2 151 ARG n 2 152 VAL n 2 153 VAL n 2 154 THR n 2 155 VAL n 2 156 SER n 2 157 GLY n 2 158 GLU n 2 159 PRO n 2 160 GLU n 2 161 GLN n 2 162 ASN n 2 163 ARG n 2 164 LYS n 2 165 ALA n 2 166 VAL n 2 167 GLU n 2 168 LEU n 2 169 ILE n 2 170 ILE n 2 171 GLN n 2 172 LYS n 2 173 ILE n 2 174 GLN n 2 175 GLU n 2 176 ASP n 2 177 PRO n 2 178 GLN n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 178 _entity_src_gen.gene_src_common_name Mouse _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene Nova1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 25 _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 1 ? ? ? B . n A 1 2 G 2 2 ? ? ? B . n A 1 3 C 3 3 3 C C B . n A 1 4 G 4 4 4 G G B . n A 1 5 C 5 5 5 C C B . n A 1 6 G 6 6 6 G G B . n A 1 7 G 7 7 7 G G B . n A 1 8 A 8 8 8 A A B . n A 1 9 U 9 9 9 U U B . n A 1 10 C 10 10 10 C C B . n A 1 11 A 11 11 11 A A B . n A 1 12 G 12 12 12 G G B . n A 1 13 U 13 13 13 U U B . n A 1 14 C 14 14 14 C C B . n A 1 15 A 15 15 15 A A B . n A 1 16 C 16 16 16 C C B . n A 1 17 C 17 17 17 C C B . n A 1 18 C 18 18 18 C C B . n A 1 19 A 19 19 19 A A B . n A 1 20 A 20 20 20 A A B . n A 1 21 G 21 21 21 G G B . n A 1 22 C 22 22 22 C C B . n A 1 23 G 23 23 23 G G B . n A 1 24 C 24 24 24 C C B . n A 1 25 G 25 25 25 G G B . n B 2 1 PRO 1 1 ? ? ? A . n B 2 2 LEU 2 2 ? ? ? A . n B 2 3 GLY 3 3 3 GLY GLY A . n B 2 4 SER 4 4 4 SER SER A . n B 2 5 GLN 5 5 5 GLN GLN A . n B 2 6 TYR 6 6 6 TYR TYR A . n B 2 7 PHE 7 7 7 PHE PHE A . n B 2 8 LEU 8 8 8 LEU LEU A . n B 2 9 LYS 9 9 9 LYS LYS A . n B 2 10 VAL 10 10 10 VAL VAL A . n B 2 11 LEU 11 11 11 LEU LEU A . n B 2 12 ILE 12 12 12 ILE ILE A . n B 2 13 PRO 13 13 13 PRO PRO A . n B 2 14 SER 14 14 14 SER SER A . n B 2 15 TYR 15 15 15 TYR TYR A . n B 2 16 ALA 16 16 16 ALA ALA A . n B 2 17 ALA 17 17 17 ALA ALA A . n B 2 18 GLY 18 18 18 GLY GLY A . n B 2 19 SER 19 19 19 SER SER A . n B 2 20 ILE 20 20 20 ILE ILE A . n B 2 21 ILE 21 21 21 ILE ILE A . n B 2 22 GLY 22 22 22 GLY GLY A . n B 2 23 LYS 23 23 23 LYS LYS A . n B 2 24 GLY 24 24 24 GLY GLY A . n B 2 25 GLY 25 25 25 GLY GLY A . n B 2 26 GLN 26 26 26 GLN GLN A . n B 2 27 THR 27 27 27 THR THR A . n B 2 28 ILE 28 28 28 ILE ILE A . n B 2 29 VAL 29 29 29 VAL VAL A . n B 2 30 GLN 30 30 30 GLN GLN A . n B 2 31 LEU 31 31 31 LEU LEU A . n B 2 32 GLN 32 32 32 GLN GLN A . n B 2 33 LYS 33 33 33 LYS LYS A . n B 2 34 GLU 34 34 34 GLU GLU A . n B 2 35 THR 35 35 35 THR THR A . n B 2 36 GLY 36 36 36 GLY GLY A . n B 2 37 ALA 37 37 37 ALA ALA A . n B 2 38 THR 38 38 38 THR THR A . n B 2 39 ILE 39 39 39 ILE ILE A . n B 2 40 LYS 40 40 40 LYS LYS A . n B 2 41 LEU 41 41 41 LEU LEU A . n B 2 42 SER 42 42 42 SER SER A . n B 2 43 LYS 43 43 43 LYS LYS A . n B 2 44 SER 44 44 44 SER SER A . n B 2 45 LYS 45 45 45 LYS LYS A . n B 2 46 ASP 46 46 46 ASP ASP A . n B 2 47 PHE 47 47 47 PHE PHE A . n B 2 48 TYR 48 48 48 TYR TYR A . n B 2 49 PRO 49 49 49 PRO PRO A . n B 2 50 GLY 50 50 50 GLY GLY A . n B 2 51 THR 51 51 51 THR THR A . n B 2 52 THR 52 52 52 THR THR A . n B 2 53 GLU 53 53 53 GLU GLU A . n B 2 54 ARG 54 54 54 ARG ARG A . n B 2 55 VAL 55 55 55 VAL VAL A . n B 2 56 CYS 56 56 56 CYS CYS A . n B 2 57 LEU 57 57 57 LEU LEU A . n B 2 58 ILE 58 58 58 ILE ILE A . n B 2 59 GLN 59 59 59 GLN GLN A . n B 2 60 GLY 60 60 60 GLY GLY A . n B 2 61 THR 61 61 61 THR THR A . n B 2 62 ILE 62 62 62 ILE ILE A . n B 2 63 GLU 63 63 63 GLU GLU A . n B 2 64 ALA 64 64 64 ALA ALA A . n B 2 65 LEU 65 65 65 LEU LEU A . n B 2 66 ASN 66 66 66 ASN ASN A . n B 2 67 ALA 67 67 67 ALA ALA A . n B 2 68 VAL 68 68 68 VAL VAL A . n B 2 69 HIS 69 69 69 HIS HIS A . n B 2 70 GLY 70 70 70 GLY GLY A . n B 2 71 PHE 71 71 71 PHE PHE A . n B 2 72 ILE 72 72 72 ILE ILE A . n B 2 73 ALA 73 73 73 ALA ALA A . n B 2 74 GLU 74 74 74 GLU GLU A . n B 2 75 LYS 75 75 75 LYS LYS A . n B 2 76 ILE 76 76 76 ILE ILE A . n B 2 77 ARG 77 77 77 ARG ARG A . n B 2 78 GLU 78 78 78 GLU GLU A . n B 2 79 MET 79 79 79 MET MET A . n B 2 80 PRO 80 80 80 PRO PRO A . n B 2 81 GLN 81 81 ? ? ? A . n B 2 82 ASN 82 82 ? ? ? A . n B 2 83 VAL 83 83 ? ? ? A . n B 2 84 ALA 84 84 ? ? ? A . n B 2 85 LYS 85 85 ? ? ? A . n B 2 86 THR 86 86 ? ? ? A . n B 2 87 GLU 87 87 ? ? ? A . n B 2 88 PRO 88 88 ? ? ? A . n B 2 89 VAL 89 89 ? ? ? A . n B 2 90 SER 90 90 ? ? ? A . n B 2 91 ILE 91 91 ? ? ? A . n B 2 92 LEU 92 92 ? ? ? A . n B 2 93 GLN 93 93 ? ? ? A . n B 2 94 PRO 94 94 ? ? ? A . n B 2 95 GLN 95 95 ? ? ? A . n B 2 96 THR 96 96 ? ? ? A . n B 2 97 THR 97 97 ? ? ? A . n B 2 98 VAL 98 98 ? ? ? A . n B 2 99 ASN 99 99 ? ? ? A . n B 2 100 PRO 100 100 100 PRO PRO A . n B 2 101 ASP 101 101 101 ASP ASP A . n B 2 102 ARG 102 102 102 ARG ARG A . n B 2 103 ALA 103 103 103 ALA ALA A . n B 2 104 ASN 104 104 104 ASN ASN A . n B 2 105 GLN 105 105 105 GLN GLN A . n B 2 106 VAL 106 106 106 VAL VAL A . n B 2 107 LYS 107 107 107 LYS LYS A . n B 2 108 ILE 108 108 108 ILE ILE A . n B 2 109 ILE 109 109 109 ILE ILE A . n B 2 110 VAL 110 110 110 VAL VAL A . n B 2 111 PRO 111 111 111 PRO PRO A . n B 2 112 ASN 112 112 112 ASN ASN A . n B 2 113 SER 113 113 113 SER SER A . n B 2 114 THR 114 114 114 THR THR A . n B 2 115 ALA 115 115 115 ALA ALA A . n B 2 116 GLY 116 116 116 GLY GLY A . n B 2 117 LEU 117 117 117 LEU LEU A . n B 2 118 ILE 118 118 118 ILE ILE A . n B 2 119 ILE 119 119 119 ILE ILE A . n B 2 120 GLY 120 120 120 GLY GLY A . n B 2 121 LYS 121 121 121 LYS LYS A . n B 2 122 GLY 122 122 122 GLY GLY A . n B 2 123 GLY 123 123 123 GLY GLY A . n B 2 124 ALA 124 124 124 ALA ALA A . n B 2 125 THR 125 125 125 THR THR A . n B 2 126 VAL 126 126 126 VAL VAL A . n B 2 127 LYS 127 127 127 LYS LYS A . n B 2 128 ALA 128 128 128 ALA ALA A . n B 2 129 ILE 129 129 129 ILE ILE A . n B 2 130 MET 130 130 130 MET MET A . n B 2 131 GLU 131 131 131 GLU GLU A . n B 2 132 GLN 132 132 132 GLN GLN A . n B 2 133 SER 133 133 133 SER SER A . n B 2 134 GLY 134 134 134 GLY GLY A . n B 2 135 ALA 135 135 135 ALA ALA A . n B 2 136 TRP 136 136 136 TRP TRP A . n B 2 137 VAL 137 137 137 VAL VAL A . n B 2 138 GLN 138 138 138 GLN GLN A . n B 2 139 LEU 139 139 139 LEU LEU A . n B 2 140 SER 140 140 140 SER SER A . n B 2 141 GLN 141 141 ? ? ? A . n B 2 142 LYS 142 142 ? ? ? A . n B 2 143 PRO 143 143 ? ? ? A . n B 2 144 ASP 144 144 ? ? ? A . n B 2 145 GLY 145 145 ? ? ? A . n B 2 146 ILE 146 146 ? ? ? A . n B 2 147 ASN 147 147 ? ? ? A . n B 2 148 LEU 148 148 ? ? ? A . n B 2 149 GLN 149 149 149 GLN GLN A . n B 2 150 ASN 150 150 150 ASN ASN A . n B 2 151 ARG 151 151 151 ARG ARG A . n B 2 152 VAL 152 152 152 VAL VAL A . n B 2 153 VAL 153 153 153 VAL VAL A . n B 2 154 THR 154 154 154 THR THR A . n B 2 155 VAL 155 155 155 VAL VAL A . n B 2 156 SER 156 156 156 SER SER A . n B 2 157 GLY 157 157 157 GLY GLY A . n B 2 158 GLU 158 158 158 GLU GLU A . n B 2 159 PRO 159 159 159 PRO PRO A . n B 2 160 GLU 160 160 160 GLU GLU A . n B 2 161 GLN 161 161 161 GLN GLN A . n B 2 162 ASN 162 162 162 ASN ASN A . n B 2 163 ARG 163 163 163 ARG ARG A . n B 2 164 LYS 164 164 164 LYS LYS A . n B 2 165 ALA 165 165 165 ALA ALA A . n B 2 166 VAL 166 166 166 VAL VAL A . n B 2 167 GLU 167 167 167 GLU GLU A . n B 2 168 LEU 168 168 168 LEU LEU A . n B 2 169 ILE 169 169 169 ILE ILE A . n B 2 170 ILE 170 170 170 ILE ILE A . n B 2 171 GLN 171 171 171 GLN GLN A . n B 2 172 LYS 172 172 172 LYS LYS A . n B 2 173 ILE 173 173 173 ILE ILE A . n B 2 174 GLN 174 174 174 GLN GLN A . n B 2 175 GLU 175 175 175 GLU GLU A . n B 2 176 ASP 176 176 176 ASP ASP A . n B 2 177 PRO 177 177 177 PRO PRO A . n B 2 178 GLN 178 178 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 K 1 301 301 K K B . D 4 MG 1 302 302 MG MG B . E 4 MG 1 303 303 MG MG B . F 5 HOH 1 304 304 HOH HOH B . F 5 HOH 2 305 305 HOH HOH B . F 5 HOH 3 306 306 HOH HOH B . F 5 HOH 4 307 307 HOH HOH B . F 5 HOH 5 308 308 HOH HOH B . F 5 HOH 6 309 309 HOH HOH B . F 5 HOH 7 310 310 HOH HOH B . F 5 HOH 8 311 311 HOH HOH B . F 5 HOH 9 312 312 HOH HOH B . F 5 HOH 10 313 313 HOH HOH B . F 5 HOH 11 314 314 HOH HOH B . F 5 HOH 12 315 315 HOH HOH B . F 5 HOH 13 316 316 HOH HOH B . F 5 HOH 14 317 317 HOH HOH B . F 5 HOH 15 318 318 HOH HOH B . F 5 HOH 16 319 319 HOH HOH B . F 5 HOH 17 320 320 HOH HOH B . F 5 HOH 18 321 321 HOH HOH B . F 5 HOH 19 322 322 HOH HOH B . F 5 HOH 20 323 323 HOH HOH B . F 5 HOH 21 324 324 HOH HOH B . F 5 HOH 22 326 326 HOH HOH B . F 5 HOH 23 327 327 HOH HOH B . F 5 HOH 24 328 328 HOH HOH B . F 5 HOH 25 329 329 HOH HOH B . F 5 HOH 26 330 330 HOH HOH B . F 5 HOH 27 331 331 HOH HOH B . F 5 HOH 28 332 332 HOH HOH B . F 5 HOH 29 333 333 HOH HOH B . F 5 HOH 30 334 334 HOH HOH B . F 5 HOH 31 335 335 HOH HOH B . F 5 HOH 32 336 336 HOH HOH B . F 5 HOH 33 337 337 HOH HOH B . F 5 HOH 34 338 338 HOH HOH B . F 5 HOH 35 339 339 HOH HOH B . F 5 HOH 36 340 340 HOH HOH B . F 5 HOH 37 341 341 HOH HOH B . F 5 HOH 38 342 342 HOH HOH B . F 5 HOH 39 343 343 HOH HOH B . F 5 HOH 40 344 344 HOH HOH B . F 5 HOH 41 345 345 HOH HOH B . F 5 HOH 42 346 346 HOH HOH B . F 5 HOH 43 347 347 HOH HOH B . F 5 HOH 44 349 349 HOH HOH B . F 5 HOH 45 350 350 HOH HOH B . F 5 HOH 46 404 404 HOH HOH B . F 5 HOH 47 406 406 HOH HOH B . F 5 HOH 48 407 407 HOH HOH B . F 5 HOH 49 408 408 HOH HOH B . G 5 HOH 1 325 325 HOH HOH A . G 5 HOH 2 348 348 HOH HOH A . G 5 HOH 3 351 351 HOH HOH A . G 5 HOH 4 352 352 HOH HOH A . G 5 HOH 5 353 353 HOH HOH A . G 5 HOH 6 354 354 HOH HOH A . G 5 HOH 7 355 355 HOH HOH A . G 5 HOH 8 356 356 HOH HOH A . G 5 HOH 9 357 357 HOH HOH A . G 5 HOH 10 358 358 HOH HOH A . G 5 HOH 11 359 359 HOH HOH A . G 5 HOH 12 360 360 HOH HOH A . G 5 HOH 13 361 361 HOH HOH A . G 5 HOH 14 362 362 HOH HOH A . G 5 HOH 15 363 363 HOH HOH A . G 5 HOH 16 364 364 HOH HOH A . G 5 HOH 17 365 365 HOH HOH A . G 5 HOH 18 366 366 HOH HOH A . G 5 HOH 19 367 367 HOH HOH A . G 5 HOH 20 368 368 HOH HOH A . G 5 HOH 21 369 369 HOH HOH A . G 5 HOH 22 370 370 HOH HOH A . G 5 HOH 23 371 371 HOH HOH A . G 5 HOH 24 372 372 HOH HOH A . G 5 HOH 25 401 401 HOH HOH A . G 5 HOH 26 402 402 HOH HOH A . G 5 HOH 27 405 405 HOH HOH A . G 5 HOH 28 409 409 HOH HOH A . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 3 PDB_EXTRACT 1.700 'May. 30, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 SBC-Collect . ? ? ? ? 'data collection' ? ? ? 5 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 6 AMoRE . ? ? ? ? phasing ? ? ? 7 # _cell.length_a 155.304 _cell.length_b 37.147 _cell.length_c 34.825 _cell.angle_alpha 90.00 _cell.angle_beta 94.42 _cell.angle_gamma 90.00 _cell.entry_id 2ANN _cell.pdbx_unique_axis ? _cell.Z_PDB 4 # _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.entry_id 2ANN _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 5 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.entry_id 2ANN _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.22 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 44.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details 'PEG 4000, isopropanole, sodium citrate, potassium chloride, magnesium chloride, pH 5.6, VAPOR DIFFUSION, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 'PEG 4000' ? ? ? 1 2 1 isopropanole ? ? ? 1 3 1 'sodium citrate' ? ? ? 1 4 1 'potassium chloride' ? ? ? 1 5 1 'magnesium chloride' ? ? ? 1 6 1 H2O ? ? ? 1 7 2 'PEG 4000' ? ? ? 1 8 2 'sodium citrate' ? ? ? 1 9 2 'potassium chloride' ? ? ? 1 10 2 'magnesium chloride' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type APS-1 _diffrn_detector.pdbx_collection_date 2002-11-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0080 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0080 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID # _reflns.entry_id 2ANN _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 2.30 _reflns.number_obs 9118 _reflns.percent_possible_obs 99.700 _reflns.pdbx_Rmerge_I_obs 0.068 _reflns.pdbx_chi_squared 1.118 _reflns.pdbx_redundancy 3.5 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_Rsym_value ? _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.number_all ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_low 2.38 _reflns_shell.d_res_high 2.30 _reflns_shell.number_measured_obs 873 _reflns_shell.percent_possible_obs 97.900 _reflns_shell.Rmerge_I_obs 0.444 _reflns_shell.pdbx_chi_squared 1.486 _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_obs ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.percent_possible_all 97.9 _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_d_res_high 2.300 _refine.ls_d_res_low 20.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.770 _refine.ls_number_reflns_obs 8981 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all 0.196 _refine.ls_R_factor_R_work 0.193 _refine.ls_R_factor_R_free 0.249 _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 430 _refine.B_iso_mean 27.912 _refine.aniso_B[1][1] -0.330 _refine.aniso_B[2][2] 2.020 _refine.aniso_B[3][3] -1.870 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -1.130 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.correlation_coeff_Fo_to_Fc_free 0.923 _refine.pdbx_overall_ESU_R 0.438 _refine.pdbx_overall_ESU_R_Free 0.258 _refine.overall_SU_ML 0.168 _refine.overall_SU_B 6.888 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.entry_id 2ANN _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 9010 _refine.ls_R_factor_obs 0.196 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'Nova-2 KH3 domain from PDB ENTRY 1EC6, and idealised 5 bp A-RNA' _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1118 _refine_hist.pdbx_number_atoms_nucleic_acid 491 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 77 _refine_hist.number_atoms_total 1689 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 20.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1679 0.011 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2375 1.335 2.016 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 145 5.644 5.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 272 0.083 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1048 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 754 0.218 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 92 0.163 0.200 ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 6 0.270 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 53 0.195 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 10 0.253 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 729 0.592 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1176 1.129 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 950 1.728 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 1199 2.617 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.300 _refine_ls_shell.d_res_low 2.359 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.number_reflns_R_work 599 _refine_ls_shell.R_factor_R_work 0.304 _refine_ls_shell.R_factor_R_free 0.469 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 30 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2ANN _struct.title 'Crystal structure (I) of Nova-1 KH1/KH2 domain tandem with 25 nt RNA hairpin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2ANN _struct_keywords.pdbx_keywords 'RNA-binding protein/RNA' _struct_keywords.text 'PROTEIN-RNA COMPLEX, RNA-binding protein-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 2ANN 2ANN ? 1 ? 1 2 UNP NOVA1_MOUSE Q9JKN6 ? 2 ;QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVA KTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLS QKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQ ; 0 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2ANN B 1 ? 25 ? 2ANN 1 ? 25 ? 1 25 2 2 2ANN A 5 ? 178 ? Q9JKN6 49 ? 246 ? 5 178 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 2 2ANN PRO A 1 ? UNP Q9JKN6 ? ? 'expression tag' 1 1 2 2ANN LEU A 2 ? UNP Q9JKN6 ? ? 'expression tag' 2 2 2 2ANN GLY A 3 ? UNP Q9JKN6 ? ? 'expression tag' 3 3 2 2ANN SER A 4 ? UNP Q9JKN6 ? ? 'expression tag' 4 4 2 2ANN ? A ? ? UNP Q9JKN6 ARG 146 deletion ? 5 2 2ANN ? A ? ? UNP Q9JKN6 ILE 147 deletion ? 6 2 2ANN ? A ? ? UNP Q9JKN6 LYS 148 deletion ? 7 2 2ANN ? A ? ? UNP Q9JKN6 GLN 149 deletion ? 8 2 2ANN ? A ? ? UNP Q9JKN6 THR 150 deletion ? 9 2 2ANN ? A ? ? UNP Q9JKN6 LEU 151 deletion ? 10 2 2ANN ? A ? ? UNP Q9JKN6 PRO 152 deletion ? 11 2 2ANN ? A ? ? UNP Q9JKN6 SER 153 deletion ? 12 2 2ANN ? A ? ? UNP Q9JKN6 SER 154 deletion ? 13 2 2ANN ? A ? ? UNP Q9JKN6 PRO 155 deletion ? 14 2 2ANN ? A ? ? UNP Q9JKN6 THR 156 deletion ? 15 2 2ANN ? A ? ? UNP Q9JKN6 THR 157 deletion ? 16 2 2ANN ? A ? ? UNP Q9JKN6 THR 158 deletion ? 17 2 2ANN ? A ? ? UNP Q9JKN6 LYS 159 deletion ? 18 2 2ANN ? A ? ? UNP Q9JKN6 SER 160 deletion ? 19 2 2ANN ? A ? ? UNP Q9JKN6 SER 161 deletion ? 20 2 2ANN ? A ? ? UNP Q9JKN6 PRO 162 deletion ? 21 2 2ANN ? A ? ? UNP Q9JKN6 SER 163 deletion ? 22 2 2ANN ? A ? ? UNP Q9JKN6 ASP 164 deletion ? 23 2 2ANN ? A ? ? UNP Q9JKN6 PRO 165 deletion ? 24 2 2ANN ? A ? ? UNP Q9JKN6 MET 166 deletion ? 25 2 2ANN ? A ? ? UNP Q9JKN6 THR 167 deletion ? 26 2 2ANN ? A ? ? UNP Q9JKN6 THR 168 deletion ? 27 2 2ANN ? A ? ? UNP Q9JKN6 SER 169 deletion ? 28 2 2ANN ASN A 150 ? UNP Q9JKN6 GLU 218 'engineered mutation' 150 29 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER B 14 ? GLY B 22 ? SER A 14 GLY A 22 1 ? 9 HELX_P HELX_P2 2 GLY B 25 ? GLY B 36 ? GLY A 25 GLY A 36 1 ? 12 HELX_P HELX_P3 3 THR B 61 ? ARG B 77 ? THR A 61 ARG A 77 1 ? 17 HELX_P HELX_P4 4 PRO B 100 ? ALA B 103 ? PRO A 100 ALA A 103 5 ? 4 HELX_P HELX_P5 5 ASN B 112 ? GLY B 120 ? ASN A 112 GLY A 120 1 ? 9 HELX_P HELX_P6 6 GLY B 123 ? GLY B 134 ? GLY A 123 GLY A 134 1 ? 12 HELX_P HELX_P7 7 GLU B 158 ? ASP B 176 ? GLU A 158 ASP A 176 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 6 O6 ? ? ? 1_555 C K . K ? ? B G 6 B K 301 1_555 ? ? ? ? ? ? ? 2.453 ? ? metalc2 metalc ? ? A G 6 O6 ? ? ? 1_555 E MG . MG ? ? B G 6 B MG 303 1_555 ? ? ? ? ? ? ? 2.442 ? ? metalc3 metalc ? ? A G 7 O6 ? ? ? 1_555 C K . K ? ? B G 7 B K 301 1_555 ? ? ? ? ? ? ? 2.642 ? ? metalc4 metalc ? ? A G 7 O6 ? ? ? 1_555 D MG . MG ? ? B G 7 B MG 302 1_555 ? ? ? ? ? ? ? 2.537 ? ? metalc5 metalc ? ? C K . K ? ? ? 1_555 D MG . MG ? ? B K 301 B MG 302 1_555 ? ? ? ? ? ? ? 3.113 ? ? metalc6 metalc ? ? C K . K ? ? ? 1_555 E MG . MG ? ? B K 301 B MG 303 1_555 ? ? ? ? ? ? ? 3.661 ? ? metalc7 metalc ? ? C K . K ? ? ? 1_555 F HOH . O ? ? B K 301 B HOH 304 1_555 ? ? ? ? ? ? ? 2.784 ? ? metalc8 metalc ? ? C K . K ? ? ? 1_555 F HOH . O ? ? B K 301 B HOH 306 1_555 ? ? ? ? ? ? ? 2.373 ? ? metalc9 metalc ? ? C K . K ? ? ? 1_555 F HOH . O ? ? B K 301 B HOH 307 1_555 ? ? ? ? ? ? ? 2.573 ? ? metalc10 metalc ? ? C K . K ? ? ? 1_555 F HOH . O ? ? B K 301 B HOH 308 1_555 ? ? ? ? ? ? ? 3.105 ? ? metalc11 metalc ? ? C K . K ? ? ? 1_555 F HOH . O ? ? B K 301 B HOH 314 1_555 ? ? ? ? ? ? ? 2.508 ? ? metalc12 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? B MG 302 B HOH 305 1_555 ? ? ? ? ? ? ? 2.530 ? ? metalc13 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? B MG 302 B HOH 306 1_555 ? ? ? ? ? ? ? 2.779 ? ? metalc14 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? B MG 302 B HOH 307 1_555 ? ? ? ? ? ? ? 2.486 ? ? metalc15 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? B MG 302 B HOH 309 1_555 ? ? ? ? ? ? ? 2.610 ? ? metalc16 metalc ? ? E MG . MG ? ? ? 1_555 F HOH . O ? ? B MG 303 B HOH 310 1_555 ? ? ? ? ? ? ? 2.162 ? ? metalc17 metalc ? ? E MG . MG ? ? ? 1_555 F HOH . O ? ? B MG 303 B HOH 311 1_555 ? ? ? ? ? ? ? 2.672 ? ? metalc18 metalc ? ? E MG . MG ? ? ? 1_555 F HOH . O ? ? B MG 303 B HOH 312 1_555 ? ? ? ? ? ? ? 2.389 ? ? metalc19 metalc ? ? E MG . MG ? ? ? 1_555 F HOH . O ? ? B MG 303 B HOH 313 1_555 ? ? ? ? ? ? ? 2.332 ? ? metalc20 metalc ? ? E MG . MG ? ? ? 1_555 F HOH . O ? ? B MG 303 B HOH 314 1_555 ? ? ? ? ? ? ? 2.090 ? ? hydrog1 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 23 N1 ? ? B C 3 B G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 23 O6 ? ? B C 3 B G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 23 N2 ? ? B C 3 B G 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 22 N3 ? ? B G 4 B C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 22 O2 ? ? B G 4 B C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 22 N4 ? ? B G 4 B C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 21 N1 ? ? B C 5 B G 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 21 O6 ? ? B C 5 B G 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 21 N2 ? ? B C 5 B G 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 6 N2 ? ? ? 1_555 A A 20 N7 ? ? B G 6 B A 20 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog11 hydrog ? ? A G 6 N3 ? ? ? 1_555 A A 20 N6 ? ? B G 6 B A 20 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog12 hydrog ? ? A G 7 N2 ? ? ? 1_555 A A 19 N7 ? ? B G 7 B A 19 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog13 hydrog ? ? A G 7 N3 ? ? ? 1_555 A A 19 N6 ? ? B G 7 B A 19 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog14 hydrog ? ? A A 8 N6 ? ? ? 1_555 A C 18 O2 ? ? B A 8 B C 18 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A G 6 ? B G 6 ? 1_555 K ? C K . ? B K 301 ? 1_555 O6 ? A G 7 ? B G 7 ? 1_555 76.3 ? 2 O6 ? A G 6 ? B G 6 ? 1_555 K ? C K . ? B K 301 ? 1_555 MG ? D MG . ? B MG 302 ? 1_555 118.6 ? 3 O6 ? A G 7 ? B G 7 ? 1_555 K ? C K . ? B K 301 ? 1_555 MG ? D MG . ? B MG 302 ? 1_555 51.5 ? 4 O6 ? A G 6 ? B G 6 ? 1_555 K ? C K . ? B K 301 ? 1_555 MG ? E MG . ? B MG 303 ? 1_555 41.5 ? 5 O6 ? A G 7 ? B G 7 ? 1_555 K ? C K . ? B K 301 ? 1_555 MG ? E MG . ? B MG 303 ? 1_555 104.7 ? 6 MG ? D MG . ? B MG 302 ? 1_555 K ? C K . ? B K 301 ? 1_555 MG ? E MG . ? B MG 303 ? 1_555 155.9 ? 7 O6 ? A G 6 ? B G 6 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 304 ? 1_555 90.3 ? 8 O6 ? A G 7 ? B G 7 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 304 ? 1_555 151.2 ? 9 MG ? D MG . ? B MG 302 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 304 ? 1_555 119.1 ? 10 MG ? E MG . ? B MG 303 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 304 ? 1_555 79.5 ? 11 O6 ? A G 6 ? B G 6 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 306 ? 1_555 161.8 ? 12 O6 ? A G 7 ? B G 7 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 306 ? 1_555 91.0 ? 13 MG ? D MG . ? B MG 302 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 306 ? 1_555 59.1 ? 14 MG ? E MG . ? B MG 303 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 306 ? 1_555 134.0 ? 15 O ? F HOH . ? B HOH 304 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 306 ? 1_555 106.7 ? 16 O6 ? A G 6 ? B G 6 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 307 ? 1_555 94.1 ? 17 O6 ? A G 7 ? B G 7 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 307 ? 1_555 78.7 ? 18 MG ? D MG . ? B MG 302 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 307 ? 1_555 50.8 ? 19 MG ? E MG . ? B MG 303 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 307 ? 1_555 129.0 ? 20 O ? F HOH . ? B HOH 304 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 307 ? 1_555 76.9 ? 21 O ? F HOH . ? B HOH 306 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 307 ? 1_555 96.2 ? 22 O6 ? A G 6 ? B G 6 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 308 ? 1_555 84.5 ? 23 O6 ? A G 7 ? B G 7 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 308 ? 1_555 60.0 ? 24 MG ? D MG . ? B MG 302 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 308 ? 1_555 93.4 ? 25 MG ? E MG . ? B MG 303 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 308 ? 1_555 73.7 ? 26 O ? F HOH . ? B HOH 304 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 308 ? 1_555 144.9 ? 27 O ? F HOH . ? B HOH 306 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 308 ? 1_555 77.8 ? 28 O ? F HOH . ? B HOH 307 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 308 ? 1_555 137.9 ? 29 O6 ? A G 6 ? B G 6 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 314 ? 1_555 74.8 ? 30 O6 ? A G 7 ? B G 7 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 314 ? 1_555 121.8 ? 31 MG ? D MG . ? B MG 302 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 314 ? 1_555 156.7 ? 32 MG ? E MG . ? B MG 303 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 314 ? 1_555 33.4 ? 33 O ? F HOH . ? B HOH 304 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 314 ? 1_555 77.3 ? 34 O ? F HOH . ? B HOH 306 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 314 ? 1_555 101.9 ? 35 O ? F HOH . ? B HOH 307 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 314 ? 1_555 151.9 ? 36 O ? F HOH . ? B HOH 308 ? 1_555 K ? C K . ? B K 301 ? 1_555 O ? F HOH . ? B HOH 314 ? 1_555 67.8 ? 37 O6 ? A G 6 ? B G 6 ? 1_555 MG ? E MG . ? B MG 303 ? 1_555 O ? F HOH . ? B HOH 310 ? 1_555 97.3 ? 38 O6 ? A G 6 ? B G 6 ? 1_555 MG ? E MG . ? B MG 303 ? 1_555 O ? F HOH . ? B HOH 311 ? 1_555 96.2 ? 39 O ? F HOH . ? B HOH 310 ? 1_555 MG ? E MG . ? B MG 303 ? 1_555 O ? F HOH . ? B HOH 311 ? 1_555 86.4 ? 40 O6 ? A G 6 ? B G 6 ? 1_555 MG ? E MG . ? B MG 303 ? 1_555 O ? F HOH . ? B HOH 312 ? 1_555 157.7 ? 41 O ? F HOH . ? B HOH 310 ? 1_555 MG ? E MG . ? B MG 303 ? 1_555 O ? F HOH . ? B HOH 312 ? 1_555 92.4 ? 42 O ? F HOH . ? B HOH 311 ? 1_555 MG ? E MG . ? B MG 303 ? 1_555 O ? F HOH . ? B HOH 312 ? 1_555 104.4 ? 43 O6 ? A G 6 ? B G 6 ? 1_555 MG ? E MG . ? B MG 303 ? 1_555 O ? F HOH . ? B HOH 313 ? 1_555 79.7 ? 44 O ? F HOH . ? B HOH 310 ? 1_555 MG ? E MG . ? B MG 303 ? 1_555 O ? F HOH . ? B HOH 313 ? 1_555 177.1 ? 45 O ? F HOH . ? B HOH 311 ? 1_555 MG ? E MG . ? B MG 303 ? 1_555 O ? F HOH . ? B HOH 313 ? 1_555 93.6 ? 46 O ? F HOH . ? B HOH 312 ? 1_555 MG ? E MG . ? B MG 303 ? 1_555 O ? F HOH . ? B HOH 313 ? 1_555 90.4 ? 47 O6 ? A G 6 ? B G 6 ? 1_555 MG ? E MG . ? B MG 303 ? 1_555 O ? F HOH . ? B HOH 314 ? 1_555 83.0 ? 48 O ? F HOH . ? B HOH 310 ? 1_555 MG ? E MG . ? B MG 303 ? 1_555 O ? F HOH . ? B HOH 314 ? 1_555 96.6 ? 49 O ? F HOH . ? B HOH 311 ? 1_555 MG ? E MG . ? B MG 303 ? 1_555 O ? F HOH . ? B HOH 314 ? 1_555 176.9 ? 50 O ? F HOH . ? B HOH 312 ? 1_555 MG ? E MG . ? B MG 303 ? 1_555 O ? F HOH . ? B HOH 314 ? 1_555 76.0 ? 51 O ? F HOH . ? B HOH 313 ? 1_555 MG ? E MG . ? B MG 303 ? 1_555 O ? F HOH . ? B HOH 314 ? 1_555 83.4 ? 52 O6 ? A G 7 ? B G 7 ? 1_555 MG ? D MG . ? B MG 302 ? 1_555 O ? F HOH . ? B HOH 305 ? 1_555 86.9 ? 53 O6 ? A G 7 ? B G 7 ? 1_555 MG ? D MG . ? B MG 302 ? 1_555 O ? F HOH . ? B HOH 306 ? 1_555 84.6 ? 54 O ? F HOH . ? B HOH 305 ? 1_555 MG ? D MG . ? B MG 302 ? 1_555 O ? F HOH . ? B HOH 306 ? 1_555 171.4 ? 55 O6 ? A G 7 ? B G 7 ? 1_555 MG ? D MG . ? B MG 302 ? 1_555 O ? F HOH . ? B HOH 307 ? 1_555 82.4 ? 56 O ? F HOH . ? B HOH 305 ? 1_555 MG ? D MG . ? B MG 302 ? 1_555 O ? F HOH . ? B HOH 307 ? 1_555 89.0 ? 57 O ? F HOH . ? B HOH 306 ? 1_555 MG ? D MG . ? B MG 302 ? 1_555 O ? F HOH . ? B HOH 307 ? 1_555 88.6 ? 58 O6 ? A G 7 ? B G 7 ? 1_555 MG ? D MG . ? B MG 302 ? 1_555 O ? F HOH . ? B HOH 309 ? 1_555 171.3 ? 59 O ? F HOH . ? B HOH 305 ? 1_555 MG ? D MG . ? B MG 302 ? 1_555 O ? F HOH . ? B HOH 309 ? 1_555 96.1 ? 60 O ? F HOH . ? B HOH 306 ? 1_555 MG ? D MG . ? B MG 302 ? 1_555 O ? F HOH . ? B HOH 309 ? 1_555 92.4 ? 61 O ? F HOH . ? B HOH 307 ? 1_555 MG ? D MG . ? B MG 302 ? 1_555 O ? F HOH . ? B HOH 309 ? 1_555 105.8 ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR B 38 ? LEU B 41 ? THR A 38 LEU A 41 A 2 GLU B 53 ? GLY B 60 ? GLU A 53 GLY A 60 A 3 TYR B 6 ? PRO B 13 ? TYR A 6 PRO A 13 A 4 GLN B 105 ? PRO B 111 ? GLN A 105 PRO A 111 A 5 ASN B 150 ? SER B 156 ? ASN A 150 SER A 156 A 6 TRP B 136 ? LEU B 139 ? TRP A 136 LEU A 139 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS B 40 ? N LYS A 40 O LEU B 57 ? O LEU A 57 A 2 3 O ILE B 58 ? O ILE A 58 N LEU B 8 ? N LEU A 8 A 3 4 N LYS B 9 ? N LYS A 9 O ILE B 109 ? O ILE A 109 A 4 5 N ILE B 108 ? N ILE A 108 O VAL B 153 ? O VAL A 153 A 5 6 O THR B 154 ? O THR A 154 N GLN B 138 ? N GLN A 138 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B K 301 ? 8 'BINDING SITE FOR RESIDUE K B 301' AC2 Software B MG 302 ? 6 'BINDING SITE FOR RESIDUE MG B 302' AC3 Software B MG 303 ? 7 'BINDING SITE FOR RESIDUE MG B 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 G A 6 ? G B 6 . ? 1_555 ? 2 AC1 8 G A 7 ? G B 7 . ? 1_555 ? 3 AC1 8 MG D . ? MG B 302 . ? 1_555 ? 4 AC1 8 MG E . ? MG B 303 . ? 1_555 ? 5 AC1 8 HOH F . ? HOH B 304 . ? 1_555 ? 6 AC1 8 HOH F . ? HOH B 306 . ? 1_555 ? 7 AC1 8 HOH F . ? HOH B 307 . ? 1_555 ? 8 AC1 8 HOH F . ? HOH B 314 . ? 1_555 ? 9 AC2 6 G A 7 ? G B 7 . ? 1_555 ? 10 AC2 6 K C . ? K B 301 . ? 1_555 ? 11 AC2 6 HOH F . ? HOH B 305 . ? 1_555 ? 12 AC2 6 HOH F . ? HOH B 306 . ? 1_555 ? 13 AC2 6 HOH F . ? HOH B 307 . ? 1_555 ? 14 AC2 6 HOH F . ? HOH B 309 . ? 1_555 ? 15 AC3 7 G A 6 ? G B 6 . ? 1_555 ? 16 AC3 7 K C . ? K B 301 . ? 1_555 ? 17 AC3 7 HOH F . ? HOH B 310 . ? 1_555 ? 18 AC3 7 HOH F . ? HOH B 311 . ? 1_555 ? 19 AC3 7 HOH F . ? HOH B 312 . ? 1_555 ? 20 AC3 7 HOH F . ? HOH B 313 . ? 1_555 ? 21 AC3 7 HOH F . ? HOH B 314 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 49 ? ? -36.82 124.37 2 1 LYS A 121 ? ? -31.47 107.85 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 62.0320 5.3460 10.2140 0.0759 0.0429 0.1816 0.0553 -0.0367 -0.0202 3.7032 2.9855 1.6594 1.0573 0.9695 -0.2187 -0.1391 0.0406 0.0985 0.1042 0.0662 -0.3522 0.3497 -0.0705 0.1171 'X-RAY DIFFRACTION' 2 ? refined 46.3800 -16.4000 -0.0170 0.0385 0.0868 0.0792 0.0145 0.0550 0.0129 0.5587 1.6797 4.8446 0.3464 1.5291 1.3311 0.0791 0.0539 -0.1330 0.0011 -0.0073 0.0001 -0.0603 0.0346 -0.0928 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 B 3 B 177 ALL A 3 A 177 'X-RAY DIFFRACTION' ? 2 2 A 3 A 25 ALL B 3 B 25 'X-RAY DIFFRACTION' ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B C 1 ? A C 1 2 1 Y 1 B G 2 ? A G 2 3 1 Y 1 A PRO 1 ? B PRO 1 4 1 Y 1 A LEU 2 ? B LEU 2 5 1 Y 1 A GLN 81 ? B GLN 81 6 1 Y 1 A ASN 82 ? B ASN 82 7 1 Y 1 A VAL 83 ? B VAL 83 8 1 Y 1 A ALA 84 ? B ALA 84 9 1 Y 1 A LYS 85 ? B LYS 85 10 1 Y 1 A THR 86 ? B THR 86 11 1 Y 1 A GLU 87 ? B GLU 87 12 1 Y 1 A PRO 88 ? B PRO 88 13 1 Y 1 A VAL 89 ? B VAL 89 14 1 Y 1 A SER 90 ? B SER 90 15 1 Y 1 A ILE 91 ? B ILE 91 16 1 Y 1 A LEU 92 ? B LEU 92 17 1 Y 1 A GLN 93 ? B GLN 93 18 1 Y 1 A PRO 94 ? B PRO 94 19 1 Y 1 A GLN 95 ? B GLN 95 20 1 Y 1 A THR 96 ? B THR 96 21 1 Y 1 A THR 97 ? B THR 97 22 1 Y 1 A VAL 98 ? B VAL 98 23 1 Y 1 A ASN 99 ? B ASN 99 24 1 Y 1 A GLN 141 ? B GLN 141 25 1 Y 1 A LYS 142 ? B LYS 142 26 1 Y 1 A PRO 143 ? B PRO 143 27 1 Y 1 A ASP 144 ? B ASP 144 28 1 Y 1 A GLY 145 ? B GLY 145 29 1 Y 1 A ILE 146 ? B ILE 146 30 1 Y 1 A ASN 147 ? B ASN 147 31 1 Y 1 A LEU 148 ? B LEU 148 32 1 Y 1 A GLN 178 ? B GLN 178 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 HOH O O N N 268 HOH H1 H N N 269 HOH H2 H N N 270 ILE N N N N 271 ILE CA C N S 272 ILE C C N N 273 ILE O O N N 274 ILE CB C N S 275 ILE CG1 C N N 276 ILE CG2 C N N 277 ILE CD1 C N N 278 ILE OXT O N N 279 ILE H H N N 280 ILE H2 H N N 281 ILE HA H N N 282 ILE HB H N N 283 ILE HG12 H N N 284 ILE HG13 H N N 285 ILE HG21 H N N 286 ILE HG22 H N N 287 ILE HG23 H N N 288 ILE HD11 H N N 289 ILE HD12 H N N 290 ILE HD13 H N N 291 ILE HXT H N N 292 K K K N N 293 LEU N N N N 294 LEU CA C N S 295 LEU C C N N 296 LEU O O N N 297 LEU CB C N N 298 LEU CG C N N 299 LEU CD1 C N N 300 LEU CD2 C N N 301 LEU OXT O N N 302 LEU H H N N 303 LEU H2 H N N 304 LEU HA H N N 305 LEU HB2 H N N 306 LEU HB3 H N N 307 LEU HG H N N 308 LEU HD11 H N N 309 LEU HD12 H N N 310 LEU HD13 H N N 311 LEU HD21 H N N 312 LEU HD22 H N N 313 LEU HD23 H N N 314 LEU HXT H N N 315 LYS N N N N 316 LYS CA C N S 317 LYS C C N N 318 LYS O O N N 319 LYS CB C N N 320 LYS CG C N N 321 LYS CD C N N 322 LYS CE C N N 323 LYS NZ N N N 324 LYS OXT O N N 325 LYS H H N N 326 LYS H2 H N N 327 LYS HA H N N 328 LYS HB2 H N N 329 LYS HB3 H N N 330 LYS HG2 H N N 331 LYS HG3 H N N 332 LYS HD2 H N N 333 LYS HD3 H N N 334 LYS HE2 H N N 335 LYS HE3 H N N 336 LYS HZ1 H N N 337 LYS HZ2 H N N 338 LYS HZ3 H N N 339 LYS HXT H N N 340 MET N N N N 341 MET CA C N S 342 MET C C N N 343 MET O O N N 344 MET CB C N N 345 MET CG C N N 346 MET SD S N N 347 MET CE C N N 348 MET OXT O N N 349 MET H H N N 350 MET H2 H N N 351 MET HA H N N 352 MET HB2 H N N 353 MET HB3 H N N 354 MET HG2 H N N 355 MET HG3 H N N 356 MET HE1 H N N 357 MET HE2 H N N 358 MET HE3 H N N 359 MET HXT H N N 360 MG MG MG N N 361 PHE N N N N 362 PHE CA C N S 363 PHE C C N N 364 PHE O O N N 365 PHE CB C N N 366 PHE CG C Y N 367 PHE CD1 C Y N 368 PHE CD2 C Y N 369 PHE CE1 C Y N 370 PHE CE2 C Y N 371 PHE CZ C Y N 372 PHE OXT O N N 373 PHE H H N N 374 PHE H2 H N N 375 PHE HA H N N 376 PHE HB2 H N N 377 PHE HB3 H N N 378 PHE HD1 H N N 379 PHE HD2 H N N 380 PHE HE1 H N N 381 PHE HE2 H N N 382 PHE HZ H N N 383 PHE HXT H N N 384 PRO N N N N 385 PRO CA C N S 386 PRO C C N N 387 PRO O O N N 388 PRO CB C N N 389 PRO CG C N N 390 PRO CD C N N 391 PRO OXT O N N 392 PRO H H N N 393 PRO HA H N N 394 PRO HB2 H N N 395 PRO HB3 H N N 396 PRO HG2 H N N 397 PRO HG3 H N N 398 PRO HD2 H N N 399 PRO HD3 H N N 400 PRO HXT H N N 401 SER N N N N 402 SER CA C N S 403 SER C C N N 404 SER O O N N 405 SER CB C N N 406 SER OG O N N 407 SER OXT O N N 408 SER H H N N 409 SER H2 H N N 410 SER HA H N N 411 SER HB2 H N N 412 SER HB3 H N N 413 SER HG H N N 414 SER HXT H N N 415 THR N N N N 416 THR CA C N S 417 THR C C N N 418 THR O O N N 419 THR CB C N R 420 THR OG1 O N N 421 THR CG2 C N N 422 THR OXT O N N 423 THR H H N N 424 THR H2 H N N 425 THR HA H N N 426 THR HB H N N 427 THR HG1 H N N 428 THR HG21 H N N 429 THR HG22 H N N 430 THR HG23 H N N 431 THR HXT H N N 432 TRP N N N N 433 TRP CA C N S 434 TRP C C N N 435 TRP O O N N 436 TRP CB C N N 437 TRP CG C Y N 438 TRP CD1 C Y N 439 TRP CD2 C Y N 440 TRP NE1 N Y N 441 TRP CE2 C Y N 442 TRP CE3 C Y N 443 TRP CZ2 C Y N 444 TRP CZ3 C Y N 445 TRP CH2 C Y N 446 TRP OXT O N N 447 TRP H H N N 448 TRP H2 H N N 449 TRP HA H N N 450 TRP HB2 H N N 451 TRP HB3 H N N 452 TRP HD1 H N N 453 TRP HE1 H N N 454 TRP HE3 H N N 455 TRP HZ2 H N N 456 TRP HZ3 H N N 457 TRP HH2 H N N 458 TRP HXT H N N 459 TYR N N N N 460 TYR CA C N S 461 TYR C C N N 462 TYR O O N N 463 TYR CB C N N 464 TYR CG C Y N 465 TYR CD1 C Y N 466 TYR CD2 C Y N 467 TYR CE1 C Y N 468 TYR CE2 C Y N 469 TYR CZ C Y N 470 TYR OH O N N 471 TYR OXT O N N 472 TYR H H N N 473 TYR H2 H N N 474 TYR HA H N N 475 TYR HB2 H N N 476 TYR HB3 H N N 477 TYR HD1 H N N 478 TYR HD2 H N N 479 TYR HE1 H N N 480 TYR HE2 H N N 481 TYR HH H N N 482 TYR HXT H N N 483 U OP3 O N N 484 U P P N N 485 U OP1 O N N 486 U OP2 O N N 487 U "O5'" O N N 488 U "C5'" C N N 489 U "C4'" C N R 490 U "O4'" O N N 491 U "C3'" C N S 492 U "O3'" O N N 493 U "C2'" C N R 494 U "O2'" O N N 495 U "C1'" C N R 496 U N1 N N N 497 U C2 C N N 498 U O2 O N N 499 U N3 N N N 500 U C4 C N N 501 U O4 O N N 502 U C5 C N N 503 U C6 C N N 504 U HOP3 H N N 505 U HOP2 H N N 506 U "H5'" H N N 507 U "H5''" H N N 508 U "H4'" H N N 509 U "H3'" H N N 510 U "HO3'" H N N 511 U "H2'" H N N 512 U "HO2'" H N N 513 U "H1'" H N N 514 U H3 H N N 515 U H5 H N N 516 U H6 H N N 517 VAL N N N N 518 VAL CA C N S 519 VAL C C N N 520 VAL O O N N 521 VAL CB C N N 522 VAL CG1 C N N 523 VAL CG2 C N N 524 VAL OXT O N N 525 VAL H H N N 526 VAL H2 H N N 527 VAL HA H N N 528 VAL HB H N N 529 VAL HG11 H N N 530 VAL HG12 H N N 531 VAL HG13 H N N 532 VAL HG21 H N N 533 VAL HG22 H N N 534 VAL HG23 H N N 535 VAL HXT H N N 536 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 HOH O H1 sing N N 265 HOH O H2 sing N N 266 ILE N CA sing N N 267 ILE N H sing N N 268 ILE N H2 sing N N 269 ILE CA C sing N N 270 ILE CA CB sing N N 271 ILE CA HA sing N N 272 ILE C O doub N N 273 ILE C OXT sing N N 274 ILE CB CG1 sing N N 275 ILE CB CG2 sing N N 276 ILE CB HB sing N N 277 ILE CG1 CD1 sing N N 278 ILE CG1 HG12 sing N N 279 ILE CG1 HG13 sing N N 280 ILE CG2 HG21 sing N N 281 ILE CG2 HG22 sing N N 282 ILE CG2 HG23 sing N N 283 ILE CD1 HD11 sing N N 284 ILE CD1 HD12 sing N N 285 ILE CD1 HD13 sing N N 286 ILE OXT HXT sing N N 287 LEU N CA sing N N 288 LEU N H sing N N 289 LEU N H2 sing N N 290 LEU CA C sing N N 291 LEU CA CB sing N N 292 LEU CA HA sing N N 293 LEU C O doub N N 294 LEU C OXT sing N N 295 LEU CB CG sing N N 296 LEU CB HB2 sing N N 297 LEU CB HB3 sing N N 298 LEU CG CD1 sing N N 299 LEU CG CD2 sing N N 300 LEU CG HG sing N N 301 LEU CD1 HD11 sing N N 302 LEU CD1 HD12 sing N N 303 LEU CD1 HD13 sing N N 304 LEU CD2 HD21 sing N N 305 LEU CD2 HD22 sing N N 306 LEU CD2 HD23 sing N N 307 LEU OXT HXT sing N N 308 LYS N CA sing N N 309 LYS N H sing N N 310 LYS N H2 sing N N 311 LYS CA C sing N N 312 LYS CA CB sing N N 313 LYS CA HA sing N N 314 LYS C O doub N N 315 LYS C OXT sing N N 316 LYS CB CG sing N N 317 LYS CB HB2 sing N N 318 LYS CB HB3 sing N N 319 LYS CG CD sing N N 320 LYS CG HG2 sing N N 321 LYS CG HG3 sing N N 322 LYS CD CE sing N N 323 LYS CD HD2 sing N N 324 LYS CD HD3 sing N N 325 LYS CE NZ sing N N 326 LYS CE HE2 sing N N 327 LYS CE HE3 sing N N 328 LYS NZ HZ1 sing N N 329 LYS NZ HZ2 sing N N 330 LYS NZ HZ3 sing N N 331 LYS OXT HXT sing N N 332 MET N CA sing N N 333 MET N H sing N N 334 MET N H2 sing N N 335 MET CA C sing N N 336 MET CA CB sing N N 337 MET CA HA sing N N 338 MET C O doub N N 339 MET C OXT sing N N 340 MET CB CG sing N N 341 MET CB HB2 sing N N 342 MET CB HB3 sing N N 343 MET CG SD sing N N 344 MET CG HG2 sing N N 345 MET CG HG3 sing N N 346 MET SD CE sing N N 347 MET CE HE1 sing N N 348 MET CE HE2 sing N N 349 MET CE HE3 sing N N 350 MET OXT HXT sing N N 351 PHE N CA sing N N 352 PHE N H sing N N 353 PHE N H2 sing N N 354 PHE CA C sing N N 355 PHE CA CB sing N N 356 PHE CA HA sing N N 357 PHE C O doub N N 358 PHE C OXT sing N N 359 PHE CB CG sing N N 360 PHE CB HB2 sing N N 361 PHE CB HB3 sing N N 362 PHE CG CD1 doub Y N 363 PHE CG CD2 sing Y N 364 PHE CD1 CE1 sing Y N 365 PHE CD1 HD1 sing N N 366 PHE CD2 CE2 doub Y N 367 PHE CD2 HD2 sing N N 368 PHE CE1 CZ doub Y N 369 PHE CE1 HE1 sing N N 370 PHE CE2 CZ sing Y N 371 PHE CE2 HE2 sing N N 372 PHE CZ HZ sing N N 373 PHE OXT HXT sing N N 374 PRO N CA sing N N 375 PRO N CD sing N N 376 PRO N H sing N N 377 PRO CA C sing N N 378 PRO CA CB sing N N 379 PRO CA HA sing N N 380 PRO C O doub N N 381 PRO C OXT sing N N 382 PRO CB CG sing N N 383 PRO CB HB2 sing N N 384 PRO CB HB3 sing N N 385 PRO CG CD sing N N 386 PRO CG HG2 sing N N 387 PRO CG HG3 sing N N 388 PRO CD HD2 sing N N 389 PRO CD HD3 sing N N 390 PRO OXT HXT sing N N 391 SER N CA sing N N 392 SER N H sing N N 393 SER N H2 sing N N 394 SER CA C sing N N 395 SER CA CB sing N N 396 SER CA HA sing N N 397 SER C O doub N N 398 SER C OXT sing N N 399 SER CB OG sing N N 400 SER CB HB2 sing N N 401 SER CB HB3 sing N N 402 SER OG HG sing N N 403 SER OXT HXT sing N N 404 THR N CA sing N N 405 THR N H sing N N 406 THR N H2 sing N N 407 THR CA C sing N N 408 THR CA CB sing N N 409 THR CA HA sing N N 410 THR C O doub N N 411 THR C OXT sing N N 412 THR CB OG1 sing N N 413 THR CB CG2 sing N N 414 THR CB HB sing N N 415 THR OG1 HG1 sing N N 416 THR CG2 HG21 sing N N 417 THR CG2 HG22 sing N N 418 THR CG2 HG23 sing N N 419 THR OXT HXT sing N N 420 TRP N CA sing N N 421 TRP N H sing N N 422 TRP N H2 sing N N 423 TRP CA C sing N N 424 TRP CA CB sing N N 425 TRP CA HA sing N N 426 TRP C O doub N N 427 TRP C OXT sing N N 428 TRP CB CG sing N N 429 TRP CB HB2 sing N N 430 TRP CB HB3 sing N N 431 TRP CG CD1 doub Y N 432 TRP CG CD2 sing Y N 433 TRP CD1 NE1 sing Y N 434 TRP CD1 HD1 sing N N 435 TRP CD2 CE2 doub Y N 436 TRP CD2 CE3 sing Y N 437 TRP NE1 CE2 sing Y N 438 TRP NE1 HE1 sing N N 439 TRP CE2 CZ2 sing Y N 440 TRP CE3 CZ3 doub Y N 441 TRP CE3 HE3 sing N N 442 TRP CZ2 CH2 doub Y N 443 TRP CZ2 HZ2 sing N N 444 TRP CZ3 CH2 sing Y N 445 TRP CZ3 HZ3 sing N N 446 TRP CH2 HH2 sing N N 447 TRP OXT HXT sing N N 448 TYR N CA sing N N 449 TYR N H sing N N 450 TYR N H2 sing N N 451 TYR CA C sing N N 452 TYR CA CB sing N N 453 TYR CA HA sing N N 454 TYR C O doub N N 455 TYR C OXT sing N N 456 TYR CB CG sing N N 457 TYR CB HB2 sing N N 458 TYR CB HB3 sing N N 459 TYR CG CD1 doub Y N 460 TYR CG CD2 sing Y N 461 TYR CD1 CE1 sing Y N 462 TYR CD1 HD1 sing N N 463 TYR CD2 CE2 doub Y N 464 TYR CD2 HD2 sing N N 465 TYR CE1 CZ doub Y N 466 TYR CE1 HE1 sing N N 467 TYR CE2 CZ sing Y N 468 TYR CE2 HE2 sing N N 469 TYR CZ OH sing N N 470 TYR OH HH sing N N 471 TYR OXT HXT sing N N 472 U OP3 P sing N N 473 U OP3 HOP3 sing N N 474 U P OP1 doub N N 475 U P OP2 sing N N 476 U P "O5'" sing N N 477 U OP2 HOP2 sing N N 478 U "O5'" "C5'" sing N N 479 U "C5'" "C4'" sing N N 480 U "C5'" "H5'" sing N N 481 U "C5'" "H5''" sing N N 482 U "C4'" "O4'" sing N N 483 U "C4'" "C3'" sing N N 484 U "C4'" "H4'" sing N N 485 U "O4'" "C1'" sing N N 486 U "C3'" "O3'" sing N N 487 U "C3'" "C2'" sing N N 488 U "C3'" "H3'" sing N N 489 U "O3'" "HO3'" sing N N 490 U "C2'" "O2'" sing N N 491 U "C2'" "C1'" sing N N 492 U "C2'" "H2'" sing N N 493 U "O2'" "HO2'" sing N N 494 U "C1'" N1 sing N N 495 U "C1'" "H1'" sing N N 496 U N1 C2 sing N N 497 U N1 C6 sing N N 498 U C2 O2 doub N N 499 U C2 N3 sing N N 500 U N3 C4 sing N N 501 U N3 H3 sing N N 502 U C4 O4 doub N N 503 U C4 C5 sing N N 504 U C5 C6 doub N N 505 U C5 H5 sing N N 506 U C6 H6 sing N N 507 VAL N CA sing N N 508 VAL N H sing N N 509 VAL N H2 sing N N 510 VAL CA C sing N N 511 VAL CA CB sing N N 512 VAL CA HA sing N N 513 VAL C O doub N N 514 VAL C OXT sing N N 515 VAL CB CG1 sing N N 516 VAL CB CG2 sing N N 517 VAL CB HB sing N N 518 VAL CG1 HG11 sing N N 519 VAL CG1 HG12 sing N N 520 VAL CG1 HG13 sing N N 521 VAL CG2 HG21 sing N N 522 VAL CG2 HG22 sing N N 523 VAL CG2 HG23 sing N N 524 VAL OXT HXT sing N N 525 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2ANN 'double helix' 2ANN 'a-form double helix' 2ANN 'hairpin loop' 2ANN 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 3 1_555 A G 23 1_555 0.213 -0.236 -0.016 8.454 -11.782 0.623 1 B_C3:G23_B B 3 ? B 23 ? 19 1 1 A G 4 1_555 A C 22 1_555 -0.211 -0.232 -0.059 -1.856 -8.409 1.384 2 B_G4:C22_B B 4 ? B 22 ? 19 1 1 A C 5 1_555 A G 21 1_555 0.439 -0.128 -0.110 -0.159 -14.956 1.670 3 B_C5:G21_B B 5 ? B 21 ? 19 1 1 A G 6 1_555 A A 20 1_555 6.851 -4.101 0.026 -2.898 -12.159 -5.893 4 B_G6:A20_B B 6 ? B 20 ? 11 10 1 A G 7 1_555 A A 19 1_555 6.398 -4.660 0.902 14.957 12.543 4.342 5 B_G7:A19_B B 7 ? B 19 ? 11 9 1 A A 8 1_555 A C 18 1_555 -4.183 -1.060 -1.986 -41.833 -18.111 -38.347 6 B_A8:C18_B B 8 ? B 18 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 3 1_555 A G 23 1_555 A G 4 1_555 A C 22 1_555 -0.891 -2.363 3.490 -4.646 8.287 26.494 -6.779 0.762 2.753 17.386 9.747 28.117 1 BB_C3G4:C22G23_BB B 3 ? B 23 ? B 4 ? B 22 ? 1 A G 4 1_555 A C 22 1_555 A C 5 1_555 A G 21 1_555 -0.191 -1.497 3.241 -0.230 6.483 34.485 -3.408 0.284 2.921 10.817 0.383 35.071 2 BB_G4C5:G21C22_BB B 4 ? B 22 ? B 5 ? B 21 ? 1 A C 5 1_555 A G 21 1_555 A G 6 1_555 A A 20 1_555 -0.369 -0.767 3.588 2.796 8.170 60.724 -1.171 0.505 3.451 8.038 -2.751 61.277 3 BB_C5G6:A20G21_BB B 5 ? B 21 ? B 6 ? B 20 ? 1 A G 6 1_555 A A 20 1_555 A G 7 1_555 A A 19 1_555 0.815 -1.171 3.037 5.171 7.267 31.977 -3.163 -0.636 2.805 12.882 -9.165 33.166 4 BB_G6G7:A19A20_BB B 6 ? B 20 ? B 7 ? B 19 ? 1 A G 7 1_555 A A 19 1_555 A A 8 1_555 A C 18 1_555 -3.470 -1.733 4.581 5.222 6.454 3.701 -21.201 30.206 -1.356 51.321 -41.519 9.089 5 BB_G7A8:C18A19_BB B 7 ? B 19 ? B 8 ? B 18 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1EC6 _pdbx_initial_refinement_model.details 'Nova-2 KH3 domain from PDB ENTRY 1EC6, and idealised 5 bp A-RNA' # _atom_sites.entry_id 2ANN _atom_sites.fract_transf_matrix[1][1] 0.00644 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00050 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.02692 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.02880 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K MG N O P S # loop_