HEADER HYDROLASE 11-AUG-05 2ANX TITLE CRYSTAL STRUCTURE OF BACTERIOPHAGE P22 LYSOZYME MUTANT L87M COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LYSIS PROTEIN, MURAMIDASE, ENDOLYSIN; COMPND 5 EC: 3.2.1.17; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE P22; SOURCE 3 ORGANISM_TAXID: 10754; SOURCE 4 GENE: 19; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PHAGE LYSOZYME, SM-SAD, ATOMIC RESOLUTION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.H.MOOERS,B.W.MATTHEWS REVDAT 5 14-FEB-24 2ANX 1 REMARK REVDAT 4 20-OCT-21 2ANX 1 REMARK SEQADV LINK REVDAT 3 11-OCT-17 2ANX 1 REMARK REVDAT 2 24-FEB-09 2ANX 1 VERSN REVDAT 1 07-FEB-06 2ANX 0 JRNL AUTH B.H.MOOERS,B.W.MATTHEWS JRNL TITL EXTENSION TO 2268 ATOMS OF DIRECT METHODS IN THE AB INITIO JRNL TITL 2 DETERMINATION OF THE UNKNOWN STRUCTURE OF BACTERIOPHAGE P22 JRNL TITL 3 LYSOZYME. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 62 165 2006 JRNL REFN ISSN 0907-4449 JRNL PMID 16421448 JRNL DOI 10.1107/S0907444905037212 REMARK 2 REMARK 2 RESOLUTION. 1.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.117 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.150 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 2895 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 144532 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.113 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.146 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 2681 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 133 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2265 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 568 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : NULL REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : NULL REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : NULL REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : NULL REMARK 3 NUMBER OF RESTRAINTS : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.020 REMARK 3 ANGLE DISTANCES (A) : 0.035 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : NULL REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.083 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.091 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.078 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : 0.006 REMARK 3 SIMILAR ADP COMPONENTS (A**2) : 0.053 REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : 0.094 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: BABINET REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH & HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2ANX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-SEP-05. REMARK 100 THE DEPOSITION ID IS D_1000034111. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : CRYSTAL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 144532 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.040 REMARK 200 RESOLUTION RANGE LOW (A) : 42.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 42.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.22200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCD, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, PH 7.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277K, PH 7.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 67.00650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.20750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 67.00650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 25.20750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 SM SM A2802 LIES ON A SPECIAL POSITION. REMARK 375 HOH B4575 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 21 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 62 I IOD B 2818 1.93 REMARK 500 OD1 ASP B 69 O HOH B 3150 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY A 38 CA GLY A 38 C 0.886 REMARK 500 GLU B 68 CD GLU B 68 OE2 -0.078 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 1 CG - SD - CE ANGL. DEV. = -10.7 DEGREES REMARK 500 MET A 2 CG - SD - CE ANGL. DEV. = -11.8 DEGREES REMARK 500 ARG A 14 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 14 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 19 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG A 27 CD - NE - CZ ANGL. DEV. = 9.1 DEGREES REMARK 500 ARG A 27 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 GLY A 38 C - N - CA ANGL. DEV. = -24.4 DEGREES REMARK 500 GLY A 38 N - CA - C ANGL. DEV. = -18.9 DEGREES REMARK 500 GLY A 38 CA - C - O ANGL. DEV. = -26.9 DEGREES REMARK 500 GLY A 38 CA - C - N ANGL. DEV. = -21.4 DEGREES REMARK 500 GLY A 38 O - C - N ANGL. DEV. = 46.6 DEGREES REMARK 500 LYS A 39 C - N - CA ANGL. DEV. = 28.4 DEGREES REMARK 500 ARG A 76 CD - NE - CZ ANGL. DEV. = 13.1 DEGREES REMARK 500 ARG A 76 CD - NE - CZ ANGL. DEV. = 11.4 DEGREES REMARK 500 ARG A 76 NE - CZ - NH2 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 76 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 106 CD - NE - CZ ANGL. DEV. = 14.7 DEGREES REMARK 500 ARG A 106 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 138 CD - NE - CZ ANGL. DEV. = 46.7 DEGREES REMARK 500 ARG A 138 CD - NE - CZ ANGL. DEV. = 14.7 DEGREES REMARK 500 ARG A 138 NH1 - CZ - NH2 ANGL. DEV. = -8.8 DEGREES REMARK 500 ARG A 138 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 138 NE - CZ - NH2 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG B 11 CD - NE - CZ ANGL. DEV. = 49.5 DEGREES REMARK 500 ARG B 11 NH1 - CZ - NH2 ANGL. DEV. = -8.7 DEGREES REMARK 500 ARG B 11 NE - CZ - NH1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG B 11 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 14 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG B 14 NE - CZ - NH2 ANGL. DEV. = -6.2 DEGREES REMARK 500 ARG B 27 NE - CZ - NH1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG B 27 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 ARG B 76 CD - NE - CZ ANGL. DEV. = 9.8 DEGREES REMARK 500 ARG B 76 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG B 76 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 MET B 87 CA - CB - CG ANGL. DEV. = 11.1 DEGREES REMARK 500 MET B 87 CG - SD - CE ANGL. DEV. = -9.8 DEGREES REMARK 500 ARG B 106 CD - NE - CZ ANGL. DEV. = 16.5 DEGREES REMARK 500 LYS B 125 CD - CE - NZ ANGL. DEV. = 15.2 DEGREES REMARK 500 ARG B 138 CD - NE - CZ ANGL. DEV. = 8.7 DEGREES REMARK 500 ARG B 138 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 34 79.07 -113.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SM A2802 SM REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 54 OE1 REMARK 620 2 GLU A 54 OE1 152.9 REMARK 620 3 GLU A 58 OE1 83.2 119.5 REMARK 620 4 GLU A 58 OE1 119.5 83.2 74.1 REMARK 620 5 HOH A4209 O 80.5 79.8 103.6 158.8 REMARK 620 6 HOH A4209 O 79.8 80.5 158.8 103.6 86.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SM B2801 SM REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 62 OE2 REMARK 620 2 GLN A 65 OE1 107.5 REMARK 620 3 HOH A3604 O 79.5 72.6 REMARK 620 4 GLN B 65 OE1 156.3 82.3 83.2 REMARK 620 5 HOH B3152 O 129.7 71.8 139.5 73.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SM B2803 SM REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 129 OD1 REMARK 620 2 ASP A 131 OD1 76.2 REMARK 620 3 ASP B 129 OD1 86.2 128.1 REMARK 620 4 ASP B 131 OD1 128.8 150.8 74.2 REMARK 620 5 HOH B3132 O 99.0 82.3 149.3 79.2 REMARK 620 6 HOH B3321 O 151.3 77.3 101.8 79.8 88.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SM B 2801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SM A 2802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SM B 2803 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 2811 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B 2812 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 2813 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B 2814 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 2815 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B 2816 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 2817 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B 2818 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 2831 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ANV RELATED DB: PDB DBREF 2ANX A 1 146 UNP P09963 LYS_BPP22 1 146 DBREF 2ANX B 1 146 UNP P09963 LYS_BPP22 1 146 SEQADV 2ANX MET A 87 UNP P09963 LEU 87 ENGINEERED MUTATION SEQADV 2ANX MET B 87 UNP P09963 LEU 87 ENGINEERED MUTATION SEQRES 1 A 146 MET MET GLN ILE SER SER ASN GLY ILE THR ARG LEU LYS SEQRES 2 A 146 ARG GLU GLU GLY GLU ARG LEU LYS ALA TYR SER ASP SER SEQRES 3 A 146 ARG GLY ILE PRO THR ILE GLY VAL GLY HIS THR GLY LYS SEQRES 4 A 146 VAL ASP GLY ASN SER VAL ALA SER GLY MET THR ILE THR SEQRES 5 A 146 ALA GLU LYS SER SER GLU LEU LEU LYS GLU ASP LEU GLN SEQRES 6 A 146 TRP VAL GLU ASP ALA ILE SER SER LEU VAL ARG VAL PRO SEQRES 7 A 146 LEU ASN GLN ASN GLN TYR ASP ALA MET CYS SER LEU ILE SEQRES 8 A 146 PHE ASN ILE GLY LYS SER ALA PHE ALA GLY SER THR VAL SEQRES 9 A 146 LEU ARG GLN LEU ASN LEU LYS ASN TYR GLN ALA ALA ALA SEQRES 10 A 146 ASP ALA PHE LEU LEU TRP LYS LYS ALA GLY LYS ASP PRO SEQRES 11 A 146 ASP ILE LEU LEU PRO ARG ARG ARG ARG GLU ARG ALA LEU SEQRES 12 A 146 PHE LEU SER SEQRES 1 B 146 MET MET GLN ILE SER SER ASN GLY ILE THR ARG LEU LYS SEQRES 2 B 146 ARG GLU GLU GLY GLU ARG LEU LYS ALA TYR SER ASP SER SEQRES 3 B 146 ARG GLY ILE PRO THR ILE GLY VAL GLY HIS THR GLY LYS SEQRES 4 B 146 VAL ASP GLY ASN SER VAL ALA SER GLY MET THR ILE THR SEQRES 5 B 146 ALA GLU LYS SER SER GLU LEU LEU LYS GLU ASP LEU GLN SEQRES 6 B 146 TRP VAL GLU ASP ALA ILE SER SER LEU VAL ARG VAL PRO SEQRES 7 B 146 LEU ASN GLN ASN GLN TYR ASP ALA MET CYS SER LEU ILE SEQRES 8 B 146 PHE ASN ILE GLY LYS SER ALA PHE ALA GLY SER THR VAL SEQRES 9 B 146 LEU ARG GLN LEU ASN LEU LYS ASN TYR GLN ALA ALA ALA SEQRES 10 B 146 ASP ALA PHE LEU LEU TRP LYS LYS ALA GLY LYS ASP PRO SEQRES 11 B 146 ASP ILE LEU LEU PRO ARG ARG ARG ARG GLU ARG ALA LEU SEQRES 12 B 146 PHE LEU SER HET SO4 A2201 5 HET SO4 A2202 5 HET SO4 A2203 5 HET SM A2802 1 HET IOD A2811 1 HET IOD A2813 1 HET IOD A2815 1 HET IOD A2817 1 HET MG A2831 1 HET SO4 B2204 5 HET SO4 B2205 5 HET SO4 B2206 5 HET SM B2801 1 HET SM B2803 1 HET IOD B2812 1 HET IOD B2814 1 HET IOD B2816 1 HET IOD B2818 2 HETNAM SO4 SULFATE ION HETNAM SM SAMARIUM (III) ION HETNAM IOD IODIDE ION HETNAM MG MAGNESIUM ION FORMUL 3 SO4 6(O4 S 2-) FORMUL 6 SM 3(SM 3+) FORMUL 7 IOD 8(I 1-) FORMUL 11 MG MG 2+ FORMUL 21 HOH *568(H2 O) HELIX 1 1 SER A 5 GLY A 17 1 13 HELIX 2 2 THR A 52 LEU A 64 1 13 HELIX 3 3 LEU A 64 VAL A 75 1 12 HELIX 4 4 ASN A 80 GLY A 95 1 16 HELIX 5 5 GLY A 95 GLY A 101 1 7 HELIX 6 6 SER A 102 LEU A 110 1 9 HELIX 7 7 ASN A 112 PHE A 120 1 9 HELIX 8 8 LEU A 121 TRP A 123 5 3 HELIX 9 9 LEU A 133 SER A 146 1 14 HELIX 10 10 SER B 5 GLY B 17 1 13 HELIX 11 11 THR B 52 LEU B 64 1 13 HELIX 12 12 LEU B 64 VAL B 75 1 12 HELIX 13 13 ASN B 80 GLY B 95 1 16 HELIX 14 14 GLY B 95 GLY B 101 1 7 HELIX 15 15 SER B 102 LEU B 110 1 9 HELIX 16 16 ASN B 112 PHE B 120 1 9 HELIX 17 17 LEU B 121 TRP B 123 5 3 HELIX 18 18 LEU B 133 SER B 146 1 14 SHEET 1 A 2 ARG A 19 SER A 24 0 SHEET 2 A 2 PRO A 30 GLY A 33 -1 O GLY A 33 N ARG A 19 SHEET 1 B 2 ARG B 19 SER B 24 0 SHEET 2 B 2 PRO B 30 GLY B 33 -1 O THR B 31 N TYR B 23 LINK OE1 GLU A 54 SM SM A2802 1555 1555 2.38 LINK OE1 GLU A 54 SM SM A2802 2656 1555 2.38 LINK OE1 GLU A 58 SM SM A2802 1555 1555 2.29 LINK OE1 GLU A 58 SM SM A2802 2656 1555 2.29 LINK OE2 GLU A 62 SM SM B2801 2656 1555 2.44 LINK OE1 GLN A 65 SM SM B2801 2656 1555 2.22 LINK OD2 ASP A 69 MG MG A2831 1555 1555 1.91 LINK OD1 ASP A 129 SM SM B2803 4546 1555 2.32 LINK OD1 ASP A 131 SM SM B2803 4546 1555 2.17 LINK SM SM A2802 O HOH A4209 1555 1555 2.28 LINK SM SM A2802 O HOH A4209 1555 2656 2.28 LINK O HOH A3604 SM SM B2801 2656 1555 2.38 LINK OE1 GLN B 65 SM SM B2801 1555 1555 2.19 LINK OD1 ASP B 129 SM SM B2803 1555 1555 2.31 LINK OD1 ASP B 131 SM SM B2803 1555 1555 2.19 LINK SM SM B2801 O HOH B3152 1555 1555 2.34 LINK SM SM B2803 O HOH B3132 1555 1555 2.30 LINK SM SM B2803 O HOH B3321 1555 1555 2.27 SITE 1 AC1 9 PRO A 135 ARG A 139 HOH A2954 HOH A2989 SITE 2 AC1 9 HOH A3061 HOH A3401 HOH A3733 HOH A4104 SITE 3 AC1 9 HOH B4673 SITE 1 AC2 9 THR A 50 LYS A 111 TYR A 113 GLN A 114 SITE 2 AC2 9 HOH A2935 HOH A3104 HOH A3142 HOH A3537 SITE 3 AC2 9 HOH A3681 SITE 1 AC3 6 ARG A 19 LEU A 20 LYS A 21 HOH A3089 SITE 2 AC3 6 HOH A3101 HOH A4585 SITE 1 AC4 7 PRO B 135 ARG B 139 HOH B2963 HOH B3119 SITE 2 AC4 7 HOH B3274 HOH B4161 HOH B4703 SITE 1 AC5 8 ARG A 11 HOH A3025 THR B 52 LYS B 55 SITE 2 AC5 8 HOH B2978 HOH B3155 HOH B3518 HOH B3609 SITE 1 AC6 6 ARG A 27 TYR B 23 ASP B 25 SER B 26 SITE 2 AC6 6 HOH B3026 HOH B3073 SITE 1 AC7 8 GLU A 62 GLN A 65 HOH A3604 GLN B 65 SITE 2 AC7 8 HOH B3150 HOH B3151 HOH B3152 HOH B3726 SITE 1 AC8 3 GLU A 54 GLU A 58 HOH A4209 SITE 1 AC9 6 ASP A 129 ASP A 131 ASP B 129 ASP B 131 SITE 2 AC9 6 HOH B3132 HOH B3321 SITE 1 BC1 2 LYS A 61 HOH A3084 SITE 1 BC2 2 SER B 6 LYS B 61 SITE 1 BC3 3 MET A 1 THR A 10 HOH B3041 SITE 1 BC4 2 SER B 24 SER B 47 SITE 1 BC5 3 HOH A3055 HOH A3223 HOH B3609 SITE 1 BC6 2 LYS A 111 LYS B 111 SITE 1 BC7 1 HOH A3681 SITE 1 BC8 5 HIS B 36 LYS B 39 GLU B 62 HOH B2910 SITE 2 BC8 5 HOH B3294 SITE 1 BC9 1 ASP A 69 CRYST1 134.013 50.415 46.587 90.00 103.80 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007462 0.000000 0.001833 0.00000 SCALE2 0.000000 0.019835 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022103 0.00000