data_2AOD # _entry.id 2AOD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2AOD pdb_00002aod 10.2210/pdb2aod/pdb RCSB RCSB034127 ? ? WWPDB D_1000034127 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-01-17 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2013-02-27 5 'Structure model' 1 4 2017-10-11 6 'Structure model' 1 5 2023-08-23 7 'Structure model' 1 6 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other 9 5 'Structure model' Advisory 10 5 'Structure model' 'Refinement description' 11 6 'Structure model' Advisory 12 6 'Structure model' 'Data collection' 13 6 'Structure model' 'Database references' 14 6 'Structure model' 'Derived calculations' 15 6 'Structure model' 'Refinement description' 16 7 'Structure model' 'Source and taxonomy' 17 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' pdbx_unobs_or_zero_occ_atoms 2 5 'Structure model' software 3 6 'Structure model' chem_comp_atom 4 6 'Structure model' chem_comp_bond 5 6 'Structure model' database_2 6 6 'Structure model' pdbx_initial_refinement_model 7 6 'Structure model' pdbx_unobs_or_zero_occ_atoms 8 6 'Structure model' struct_conn 9 6 'Structure model' struct_ref_seq_dif 10 6 'Structure model' struct_site 11 7 'Structure model' entity 12 7 'Structure model' pdbx_entity_src_syn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_software.classification' 2 5 'Structure model' '_software.name' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' 5 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 6 'Structure model' '_struct_ref_seq_dif.details' 7 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 6 'Structure model' '_struct_site.pdbx_auth_seq_id' 10 7 'Structure model' '_entity.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2AOD _pdbx_database_status.recvd_initial_deposition_date 2005-08-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1FGC . unspecified PDB 2AOC . unspecified PDB 2AOE . unspecified PDB 2AOF . unspecified PDB 2AOG . unspecified PDB 2AOH . unspecified PDB 2AOI . unspecified PDB 2AOJ . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tie, Y.' 1 'Boross, P.I.' 2 'Wang, Y.F.' 3 'Gaddis, L.' 4 'Liu, F.' 5 'Chen, X.' 6 'Tozser, J.' 7 'Harrison, R.W.' 8 'Weber, I.T.' 9 # _citation.id primary _citation.title ;Molecular basis for substrate recognition and drug resistance from 1.1 to 1.6 angstroms resolution crystal structures of HIV-1 protease mutants with substrate analogs. ; _citation.journal_abbrev 'Febs J.' _citation.journal_volume 272 _citation.page_first 5265 _citation.page_last 5277 _citation.year 2005 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1742-464X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16218957 _citation.pdbx_database_id_DOI 10.1111/j.1742-4658.2005.04923.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tie, Y.' 1 ? primary 'Boross, P.I.' 2 ? primary 'Wang, Y.F.' 3 ? primary 'Gaddis, L.' 4 ? primary 'Liu, F.' 5 ? primary 'Chen, X.' 6 ? primary 'Tozser, J.' 7 ? primary 'Harrison, R.W.' 8 ? primary 'Weber, I.T.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HIV-1 PROTEASE' 10740.677 2 3.4.23.16 'Q7K, L33I, L63I, C67A, C95A' ? ? 2 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 1 ? ? ? 'THIS SEQUENCE WAS CHEMICALLY SYNTHESIZED AND IS ANALOGOUS TO THE P2-NC PROCESSING SITE IN HIV-1.' 3 non-polymer syn 'UNKNOWN ATOM OR ION' ? 1 ? ? ? ? 4 non-polymer syn 'N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide' 770.983 1 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 6 water nat water 18.015 199 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name RETROPEPSIN # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGIGGFIKVRQYDQIIIEIAGHKAIGTVLVGPT PVNIIGRNLLTQIGATLNF ; _entity_poly.pdbx_seq_one_letter_code_can ;PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGIGGFIKVRQYDQIIIEIAGHKAIGTVLVGPT PVNIIGRNLLTQIGATLNF ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'DIMETHYL SULFOXIDE' DMS 3 'UNKNOWN ATOM OR ION' UNX 4 'N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide' 2NC 5 GLYCEROL GOL 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 GLN n 1 3 ILE n 1 4 THR n 1 5 LEU n 1 6 TRP n 1 7 LYS n 1 8 ARG n 1 9 PRO n 1 10 LEU n 1 11 VAL n 1 12 THR n 1 13 ILE n 1 14 LYS n 1 15 ILE n 1 16 GLY n 1 17 GLY n 1 18 GLN n 1 19 LEU n 1 20 LYS n 1 21 GLU n 1 22 ALA n 1 23 LEU n 1 24 LEU n 1 25 ASP n 1 26 THR n 1 27 GLY n 1 28 ALA n 1 29 ASP n 1 30 ASP n 1 31 THR n 1 32 VAL n 1 33 ILE n 1 34 GLU n 1 35 GLU n 1 36 MET n 1 37 SER n 1 38 LEU n 1 39 PRO n 1 40 GLY n 1 41 ARG n 1 42 TRP n 1 43 LYS n 1 44 PRO n 1 45 LYS n 1 46 MET n 1 47 ILE n 1 48 GLY n 1 49 GLY n 1 50 ILE n 1 51 GLY n 1 52 GLY n 1 53 PHE n 1 54 ILE n 1 55 LYS n 1 56 VAL n 1 57 ARG n 1 58 GLN n 1 59 TYR n 1 60 ASP n 1 61 GLN n 1 62 ILE n 1 63 ILE n 1 64 ILE n 1 65 GLU n 1 66 ILE n 1 67 ALA n 1 68 GLY n 1 69 HIS n 1 70 LYS n 1 71 ALA n 1 72 ILE n 1 73 GLY n 1 74 THR n 1 75 VAL n 1 76 LEU n 1 77 VAL n 1 78 GLY n 1 79 PRO n 1 80 THR n 1 81 PRO n 1 82 VAL n 1 83 ASN n 1 84 ILE n 1 85 ILE n 1 86 GLY n 1 87 ARG n 1 88 ASN n 1 89 LEU n 1 90 LEU n 1 91 THR n 1 92 GLN n 1 93 ILE n 1 94 GLY n 1 95 ALA n 1 96 THR n 1 97 LEU n 1 98 ASN n 1 99 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Lentivirus _entity_src_gen.pdbx_gene_src_gene POL _entity_src_gen.gene_src_species 'Human immunodeficiency virus 1' _entity_src_gen.gene_src_strain 'BH5 isolate' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus type 1 (BH5 ISOLATE)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11682 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET11A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2NC peptide-like . 'N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide' p2/NC 'C35 H68 N11 O8 1' 770.983 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 TRP 6 6 6 TRP TRP A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 MET 36 36 36 MET MET A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 TRP 42 42 42 TRP TRP A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 MET 46 46 46 MET MET A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 HIS 69 69 69 HIS HIS A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 PHE 99 99 99 PHE PHE A . n B 1 1 PRO 1 101 101 PRO PRO B . n B 1 2 GLN 2 102 102 GLN GLN B . n B 1 3 ILE 3 103 103 ILE ILE B . n B 1 4 THR 4 104 104 THR THR B . n B 1 5 LEU 5 105 105 LEU LEU B . n B 1 6 TRP 6 106 106 TRP TRP B . n B 1 7 LYS 7 107 107 LYS LYS B . n B 1 8 ARG 8 108 108 ARG ARG B . n B 1 9 PRO 9 109 109 PRO PRO B . n B 1 10 LEU 10 110 110 LEU LEU B . n B 1 11 VAL 11 111 111 VAL VAL B . n B 1 12 THR 12 112 112 THR THR B . n B 1 13 ILE 13 113 113 ILE ILE B . n B 1 14 LYS 14 114 114 LYS LYS B . n B 1 15 ILE 15 115 115 ILE ILE B . n B 1 16 GLY 16 116 116 GLY GLY B . n B 1 17 GLY 17 117 117 GLY GLY B . n B 1 18 GLN 18 118 118 GLN GLN B . n B 1 19 LEU 19 119 119 LEU LEU B . n B 1 20 LYS 20 120 120 LYS LYS B . n B 1 21 GLU 21 121 121 GLU GLU B . n B 1 22 ALA 22 122 122 ALA ALA B . n B 1 23 LEU 23 123 123 LEU LEU B . n B 1 24 LEU 24 124 124 LEU LEU B . n B 1 25 ASP 25 125 125 ASP ASP B . n B 1 26 THR 26 126 126 THR THR B . n B 1 27 GLY 27 127 127 GLY GLY B . n B 1 28 ALA 28 128 128 ALA ALA B . n B 1 29 ASP 29 129 129 ASP ASP B . n B 1 30 ASP 30 130 130 ASP ASP B . n B 1 31 THR 31 131 131 THR THR B . n B 1 32 VAL 32 132 132 VAL VAL B . n B 1 33 ILE 33 133 133 ILE ILE B . n B 1 34 GLU 34 134 134 GLU GLU B . n B 1 35 GLU 35 135 135 GLU GLU B . n B 1 36 MET 36 136 136 MET MET B . n B 1 37 SER 37 137 137 SER SER B . n B 1 38 LEU 38 138 138 LEU LEU B . n B 1 39 PRO 39 139 139 PRO PRO B . n B 1 40 GLY 40 140 140 GLY GLY B . n B 1 41 ARG 41 141 141 ARG ARG B . n B 1 42 TRP 42 142 142 TRP TRP B . n B 1 43 LYS 43 143 143 LYS LYS B . n B 1 44 PRO 44 144 144 PRO PRO B . n B 1 45 LYS 45 145 145 LYS LYS B . n B 1 46 MET 46 146 146 MET MET B . n B 1 47 ILE 47 147 147 ILE ILE B . n B 1 48 GLY 48 148 148 GLY GLY B . n B 1 49 GLY 49 149 149 GLY GLY B . n B 1 50 ILE 50 150 150 ILE ILE B . n B 1 51 GLY 51 151 151 GLY GLY B . n B 1 52 GLY 52 152 152 GLY GLY B . n B 1 53 PHE 53 153 153 PHE PHE B . n B 1 54 ILE 54 154 154 ILE ILE B . n B 1 55 LYS 55 155 155 LYS LYS B . n B 1 56 VAL 56 156 156 VAL VAL B . n B 1 57 ARG 57 157 157 ARG ARG B . n B 1 58 GLN 58 158 158 GLN GLN B . n B 1 59 TYR 59 159 159 TYR TYR B . n B 1 60 ASP 60 160 160 ASP ASP B . n B 1 61 GLN 61 161 161 GLN GLN B . n B 1 62 ILE 62 162 162 ILE ILE B . n B 1 63 ILE 63 163 163 ILE ILE B . n B 1 64 ILE 64 164 164 ILE ILE B . n B 1 65 GLU 65 165 165 GLU GLU B . n B 1 66 ILE 66 166 166 ILE ILE B . n B 1 67 ALA 67 167 167 ALA ALA B . n B 1 68 GLY 68 168 168 GLY GLY B . n B 1 69 HIS 69 169 169 HIS HIS B . n B 1 70 LYS 70 170 170 LYS LYS B . n B 1 71 ALA 71 171 171 ALA ALA B . n B 1 72 ILE 72 172 172 ILE ILE B . n B 1 73 GLY 73 173 173 GLY GLY B . n B 1 74 THR 74 174 174 THR THR B . n B 1 75 VAL 75 175 175 VAL VAL B . n B 1 76 LEU 76 176 176 LEU LEU B . n B 1 77 VAL 77 177 177 VAL VAL B . n B 1 78 GLY 78 178 178 GLY GLY B . n B 1 79 PRO 79 179 179 PRO PRO B . n B 1 80 THR 80 180 180 THR THR B . n B 1 81 PRO 81 181 181 PRO PRO B . n B 1 82 VAL 82 182 182 VAL VAL B . n B 1 83 ASN 83 183 183 ASN ASN B . n B 1 84 ILE 84 184 184 ILE ILE B . n B 1 85 ILE 85 185 185 ILE ILE B . n B 1 86 GLY 86 186 186 GLY GLY B . n B 1 87 ARG 87 187 187 ARG ARG B . n B 1 88 ASN 88 188 188 ASN ASN B . n B 1 89 LEU 89 189 189 LEU LEU B . n B 1 90 LEU 90 190 190 LEU LEU B . n B 1 91 THR 91 191 191 THR THR B . n B 1 92 GLN 92 192 192 GLN GLN B . n B 1 93 ILE 93 193 193 ILE ILE B . n B 1 94 GLY 94 194 194 GLY GLY B . n B 1 95 ALA 95 195 195 ALA ALA B . n B 1 96 THR 96 196 196 THR THR B . n B 1 97 LEU 97 197 197 LEU LEU B . n B 1 98 ASN 98 198 198 ASN ASN B . n B 1 99 PHE 99 199 199 PHE PHE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DMS 1 905 905 DMS DMS A . D 3 UNX 1 407 401 UNX UNX A . E 4 2NC 1 400 400 2NC ACE B . F 5 GOL 1 801 801 GOL GOL B . G 5 GOL 1 802 802 GOL GOL B . H 5 GOL 1 803 803 GOL GOL B . I 6 HOH 1 1001 1001 HOH HOH A . I 6 HOH 2 1006 1006 HOH HOH A . I 6 HOH 3 1010 1010 HOH HOH A . I 6 HOH 4 1012 1012 HOH HOH A . I 6 HOH 5 1013 1013 HOH HOH A . I 6 HOH 6 1015 1015 HOH HOH A . I 6 HOH 7 1016 1016 HOH HOH A . I 6 HOH 8 1017 1017 HOH HOH A . I 6 HOH 9 1021 1021 HOH HOH A . I 6 HOH 10 1022 1022 HOH HOH A . I 6 HOH 11 1023 1023 HOH HOH A . I 6 HOH 12 1030 1030 HOH HOH A . I 6 HOH 13 1032 1032 HOH HOH A . I 6 HOH 14 1035 1035 HOH HOH A . I 6 HOH 15 1036 1036 HOH HOH A . I 6 HOH 16 1042 1042 HOH HOH A . I 6 HOH 17 1047 1047 HOH HOH A . I 6 HOH 18 1048 1048 HOH HOH A . I 6 HOH 19 1050 1050 HOH HOH A . I 6 HOH 20 1051 1051 HOH HOH A . I 6 HOH 21 1052 1052 HOH HOH A . I 6 HOH 22 1053 1053 HOH HOH A . I 6 HOH 23 1056 1056 HOH HOH A . I 6 HOH 24 1057 1057 HOH HOH A . I 6 HOH 25 1058 1058 HOH HOH A . I 6 HOH 26 1060 1060 HOH HOH A . I 6 HOH 27 1061 1061 HOH HOH A . I 6 HOH 28 1062 1062 HOH HOH A . I 6 HOH 29 1064 1064 HOH HOH A . I 6 HOH 30 1065 1065 HOH HOH A . I 6 HOH 31 1067 1067 HOH HOH A . I 6 HOH 32 1068 1068 HOH HOH A . I 6 HOH 33 1069 1069 HOH HOH A . I 6 HOH 34 1070 1070 HOH HOH A . I 6 HOH 35 1071 1071 HOH HOH A . I 6 HOH 36 1078 1078 HOH HOH A . I 6 HOH 37 1080 1080 HOH HOH A . I 6 HOH 38 1083 1083 HOH HOH A . I 6 HOH 39 1086 1086 HOH HOH A . I 6 HOH 40 1088 1088 HOH HOH A . I 6 HOH 41 1089 1089 HOH HOH A . I 6 HOH 42 1094 1094 HOH HOH A . I 6 HOH 43 1096 1096 HOH HOH A . I 6 HOH 44 1098 1098 HOH HOH A . I 6 HOH 45 1100 1100 HOH HOH A . I 6 HOH 46 1102 1102 HOH HOH A . I 6 HOH 47 1105 1105 HOH HOH A . I 6 HOH 48 1108 1108 HOH HOH A . I 6 HOH 49 1109 1109 HOH HOH A . I 6 HOH 50 1110 1110 HOH HOH A . I 6 HOH 51 1113 1113 HOH HOH A . I 6 HOH 52 1114 1114 HOH HOH A . I 6 HOH 53 1120 1120 HOH HOH A . I 6 HOH 54 1123 1123 HOH HOH A . I 6 HOH 55 1124 1124 HOH HOH A . I 6 HOH 56 1130 1130 HOH HOH A . I 6 HOH 57 1132 1132 HOH HOH A . I 6 HOH 58 1136 1136 HOH HOH A . I 6 HOH 59 1138 1138 HOH HOH A . I 6 HOH 60 1139 1139 HOH HOH A . I 6 HOH 61 1140 1140 HOH HOH A . I 6 HOH 62 1141 1141 HOH HOH A . I 6 HOH 63 1142 1142 HOH HOH A . I 6 HOH 64 1143 1143 HOH HOH A . I 6 HOH 65 1147 1147 HOH HOH A . I 6 HOH 66 1150 1150 HOH HOH A . I 6 HOH 67 1151 1151 HOH HOH A . I 6 HOH 68 1152 1152 HOH HOH A . I 6 HOH 69 1155 1155 HOH HOH A . I 6 HOH 70 1158 1158 HOH HOH A . I 6 HOH 71 1159 1159 HOH HOH A . I 6 HOH 72 1160 1160 HOH HOH A . I 6 HOH 73 1161 1161 HOH HOH A . I 6 HOH 74 1162 1162 HOH HOH A . I 6 HOH 75 1163 1163 HOH HOH A . I 6 HOH 76 1164 1164 HOH HOH A . I 6 HOH 77 1167 1167 HOH HOH A . I 6 HOH 78 1169 1169 HOH HOH A . I 6 HOH 79 1174 1174 HOH HOH A . I 6 HOH 80 1177 1177 HOH HOH A . I 6 HOH 81 1178 1178 HOH HOH A . I 6 HOH 82 1179 1179 HOH HOH A . I 6 HOH 83 1181 1181 HOH HOH A . I 6 HOH 84 1183 1183 HOH HOH A . I 6 HOH 85 1184 1184 HOH HOH A . I 6 HOH 86 1185 1185 HOH HOH A . I 6 HOH 87 1186 1186 HOH HOH A . I 6 HOH 88 1190 1190 HOH HOH A . I 6 HOH 89 1191 1191 HOH HOH A . I 6 HOH 90 1192 1192 HOH HOH A . I 6 HOH 91 1193 1193 HOH HOH A . I 6 HOH 92 1194 1194 HOH HOH A . I 6 HOH 93 1195 1195 HOH HOH A . I 6 HOH 94 1199 1199 HOH HOH A . J 6 HOH 1 1002 1002 HOH HOH B . J 6 HOH 2 1003 1003 HOH HOH B . J 6 HOH 3 1004 1004 HOH HOH B . J 6 HOH 4 1005 1005 HOH HOH B . J 6 HOH 5 1007 1007 HOH HOH B . J 6 HOH 6 1008 1008 HOH HOH B . J 6 HOH 7 1009 1009 HOH HOH B . J 6 HOH 8 1011 1011 HOH HOH B . J 6 HOH 9 1014 1014 HOH HOH B . J 6 HOH 10 1018 1018 HOH HOH B . J 6 HOH 11 1019 1019 HOH HOH B . J 6 HOH 12 1020 1020 HOH HOH B . J 6 HOH 13 1024 1024 HOH HOH B . J 6 HOH 14 1025 1025 HOH HOH B . J 6 HOH 15 1026 1026 HOH HOH B . J 6 HOH 16 1027 1027 HOH HOH B . J 6 HOH 17 1028 1028 HOH HOH B . J 6 HOH 18 1029 1029 HOH HOH B . J 6 HOH 19 1031 1031 HOH HOH B . J 6 HOH 20 1033 1033 HOH HOH B . J 6 HOH 21 1034 1034 HOH HOH B . J 6 HOH 22 1037 1037 HOH HOH B . J 6 HOH 23 1038 1038 HOH HOH B . J 6 HOH 24 1039 1039 HOH HOH B . J 6 HOH 25 1040 1040 HOH HOH B . J 6 HOH 26 1041 1041 HOH HOH B . J 6 HOH 27 1043 1043 HOH HOH B . J 6 HOH 28 1044 1044 HOH HOH B . J 6 HOH 29 1045 1045 HOH HOH B . J 6 HOH 30 1046 1046 HOH HOH B . J 6 HOH 31 1049 1049 HOH HOH B . J 6 HOH 32 1054 1054 HOH HOH B . J 6 HOH 33 1055 1055 HOH HOH B . J 6 HOH 34 1059 1059 HOH HOH B . J 6 HOH 35 1063 1063 HOH HOH B . J 6 HOH 36 1066 1066 HOH HOH B . J 6 HOH 37 1072 1072 HOH HOH B . J 6 HOH 38 1073 1073 HOH HOH B . J 6 HOH 39 1074 1074 HOH HOH B . J 6 HOH 40 1075 1075 HOH HOH B . J 6 HOH 41 1076 1076 HOH HOH B . J 6 HOH 42 1077 1077 HOH HOH B . J 6 HOH 43 1079 1079 HOH HOH B . J 6 HOH 44 1081 1081 HOH HOH B . J 6 HOH 45 1082 1082 HOH HOH B . J 6 HOH 46 1084 1084 HOH HOH B . J 6 HOH 47 1085 1085 HOH HOH B . J 6 HOH 48 1087 1087 HOH HOH B . J 6 HOH 49 1090 1090 HOH HOH B . J 6 HOH 50 1091 1091 HOH HOH B . J 6 HOH 51 1092 1092 HOH HOH B . J 6 HOH 52 1093 1093 HOH HOH B . J 6 HOH 53 1095 1095 HOH HOH B . J 6 HOH 54 1097 1097 HOH HOH B . J 6 HOH 55 1099 1099 HOH HOH B . J 6 HOH 56 1101 1101 HOH HOH B . J 6 HOH 57 1103 1103 HOH HOH B . J 6 HOH 58 1104 1104 HOH HOH B . J 6 HOH 59 1106 1106 HOH HOH B . J 6 HOH 60 1107 1107 HOH HOH B . J 6 HOH 61 1111 1111 HOH HOH B . J 6 HOH 62 1112 1112 HOH HOH B . J 6 HOH 63 1115 1115 HOH HOH B . J 6 HOH 64 1116 1116 HOH HOH B . J 6 HOH 65 1117 1117 HOH HOH B . J 6 HOH 66 1118 1118 HOH HOH B . J 6 HOH 67 1119 1119 HOH HOH B . J 6 HOH 68 1121 1121 HOH HOH B . J 6 HOH 69 1122 1122 HOH HOH B . J 6 HOH 70 1125 1125 HOH HOH B . J 6 HOH 71 1126 1126 HOH HOH B . J 6 HOH 72 1127 1127 HOH HOH B . J 6 HOH 73 1128 1128 HOH HOH B . J 6 HOH 74 1129 1129 HOH HOH B . J 6 HOH 75 1131 1131 HOH HOH B . J 6 HOH 76 1133 1133 HOH HOH B . J 6 HOH 77 1134 1134 HOH HOH B . J 6 HOH 78 1135 1135 HOH HOH B . J 6 HOH 79 1137 1137 HOH HOH B . J 6 HOH 80 1144 1144 HOH HOH B . J 6 HOH 81 1145 1145 HOH HOH B . J 6 HOH 82 1146 1146 HOH HOH B . J 6 HOH 83 1148 1148 HOH HOH B . J 6 HOH 84 1149 1149 HOH HOH B . J 6 HOH 85 1153 1153 HOH HOH B . J 6 HOH 86 1154 1154 HOH HOH B . J 6 HOH 87 1156 1156 HOH HOH B . J 6 HOH 88 1157 1157 HOH HOH B . J 6 HOH 89 1165 1165 HOH HOH B . J 6 HOH 90 1166 1166 HOH HOH B . J 6 HOH 91 1168 1168 HOH HOH B . J 6 HOH 92 1170 1170 HOH HOH B . J 6 HOH 93 1171 1171 HOH HOH B . J 6 HOH 94 1172 1172 HOH HOH B . J 6 HOH 95 1173 1173 HOH HOH B . J 6 HOH 96 1175 1175 HOH HOH B . J 6 HOH 97 1176 1176 HOH HOH B . J 6 HOH 98 1180 1180 HOH HOH B . J 6 HOH 99 1182 1182 HOH HOH B . J 6 HOH 100 1187 1187 HOH HOH B . J 6 HOH 101 1188 1188 HOH HOH B . J 6 HOH 102 1189 1189 HOH HOH B . J 6 HOH 103 1196 1196 HOH HOH B . J 6 HOH 104 1197 1197 HOH HOH B . J 6 HOH 105 1198 1198 HOH HOH B . # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag N _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 0 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id DMS _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 905 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id C1 _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id C _pdbx_unobs_or_zero_occ_atoms.label_comp_id DMS _pdbx_unobs_or_zero_occ_atoms.label_seq_id ? _pdbx_unobs_or_zero_occ_atoms.label_atom_id C1 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 HKL-2000 'data reduction' . ? 3 SHELX 'model building' . ? 4 SHELXL-97 refinement . ? 5 HKL-2000 'data scaling' . ? 6 SHELX phasing . ? 7 # _cell.entry_id 2AOD _cell.length_a 57.996 _cell.length_b 85.780 _cell.length_c 46.532 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2AOD _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 2AOD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.6 _exptl_crystal.density_percent_sol 52.7 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.4 _exptl_crystal_grow.pdbx_details 'AMMONIUM SULFATE 17%, CITRATE PHOSPHATE BUFFER PH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2003-10-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI 220 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.99997 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength 0.99997 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2AOD _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.40 _reflns.number_obs 46637 _reflns.number_all ? _reflns.percent_possible_obs 95.5 _reflns.pdbx_Rmerge_I_obs 0.101 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.40 _reflns_shell.d_res_low 1.45 _reflns_shell.percent_possible_all 66.6 _reflns_shell.Rmerge_I_obs 0.456 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.06 _reflns_shell.pdbx_redundancy 2.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2AOD _refine.ls_number_reflns_obs 35279 _refine.ls_number_reflns_all 44291 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 1.40 _refine.ls_percent_reflns_obs 95.6 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all 0.1566 _refine.ls_R_factor_R_work 0.1544 _refine.ls_R_factor_R_free 0.1964 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 2210 _refine.ls_number_parameters 16976 _refine.ls_number_restraints 21445 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details ? _refine.pdbx_starting_model 'PDB Entry 2AOC' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2AOD _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 23 _refine_analyze.occupancy_sum_hydrogen 1663.00 _refine_analyze.occupancy_sum_non_hydrogen 1765.03 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1512 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 77 _refine_hist.number_atoms_solvent 199 _refine_hist.number_atoms_total 1788 _refine_hist.d_res_high 1.40 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.029 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0295 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.060 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.063 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.048 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.003 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.034 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.085 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 2AOD _pdbx_refine.R_factor_all_no_cutoff 0.1566 _pdbx_refine.R_factor_obs_no_cutoff 0.1544 _pdbx_refine.free_R_factor_no_cutoff 0.1964 _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5.0 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 2210 _pdbx_refine.R_factor_all_4sig_cutoff 0.1333 _pdbx_refine.R_factor_obs_4sig_cutoff 0.1311 _pdbx_refine.free_R_factor_4sig_cutoff 0.1735 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5.0 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 1771 _pdbx_refine.number_reflns_obs_4sig_cutoff 35279 _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _database_PDB_matrix.entry_id 2AOD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _struct.entry_id 2AOD _struct.title 'Crystal structure analysis of HIV-1 protease with a substrate analog P2-NC' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2AOD _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'HIV-1 PROTEASE, MUTANT, DIMER, SUBSTRATE ANALOG, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 6 ? J N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POL_HV1B5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; _struct_ref.pdbx_align_begin 69 _struct_ref.pdbx_db_accession P04587 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2AOD A 1 ? 99 ? P04587 69 ? 167 ? 1 99 2 1 2AOD B 1 ? 99 ? P04587 69 ? 167 ? 101 199 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2AOD LYS A 7 ? UNP P04587 GLN 75 'engineered mutation' 7 1 1 2AOD ILE A 33 ? UNP P04587 LEU 101 'engineered mutation' 33 2 1 2AOD ILE A 63 ? UNP P04587 LEU 131 'engineered mutation' 63 3 1 2AOD ALA A 67 ? UNP P04587 CYS 135 'engineered mutation' 67 4 1 2AOD ALA A 95 ? UNP P04587 CYS 163 'engineered mutation' 95 5 2 2AOD LYS B 7 ? UNP P04587 GLN 75 'engineered mutation' 107 6 2 2AOD ILE B 33 ? UNP P04587 LEU 101 'engineered mutation' 133 7 2 2AOD ILE B 63 ? UNP P04587 LEU 131 'engineered mutation' 163 8 2 2AOD ALA B 67 ? UNP P04587 CYS 135 'engineered mutation' 167 9 2 2AOD ALA B 95 ? UNP P04587 CYS 163 'engineered mutation' 195 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6150 ? 1 MORE -35 ? 1 'SSA (A^2)' 9360 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 86 ? THR A 91 ? GLY A 86 THR A 91 1 ? 6 HELX_P HELX_P2 2 GLY B 86 ? THR B 91 ? GLY B 186 THR B 191 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id D _struct_conn.ptnr1_label_comp_id UNX _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_label_atom_id UNK _struct_conn.pdbx_ptnr1_label_alt_id A _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id E _struct_conn.ptnr2_label_comp_id 2NC _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id OG1 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id UNX _struct_conn.ptnr1_auth_seq_id 407 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id 2NC _struct_conn.ptnr2_auth_seq_id 400 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.417 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 8 ? C ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? anti-parallel C 5 6 ? parallel C 6 7 ? anti-parallel C 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 2 ? ILE A 3 ? GLN A 2 ILE A 3 A 2 THR B 96 ? ASN B 98 ? THR B 196 ASN B 198 A 3 THR A 96 ? ASN A 98 ? THR A 96 ASN A 98 A 4 GLN B 2 ? ILE B 3 ? GLN B 102 ILE B 103 B 1 LYS A 43 ? GLY A 49 ? LYS A 43 GLY A 49 B 2 GLY A 52 ? ILE A 66 ? GLY A 52 ILE A 66 B 3 HIS A 69 ? VAL A 77 ? HIS A 69 VAL A 77 B 4 VAL A 32 ? ILE A 33 ? VAL A 32 ILE A 33 B 5 ILE A 84 ? ILE A 85 ? ILE A 84 ILE A 85 B 6 GLN A 18 ? LEU A 24 ? GLN A 18 LEU A 24 B 7 LEU A 10 ? ILE A 15 ? LEU A 10 ILE A 15 B 8 GLY A 52 ? ILE A 66 ? GLY A 52 ILE A 66 C 1 LYS B 43 ? GLY B 49 ? LYS B 143 GLY B 149 C 2 GLY B 52 ? ILE B 66 ? GLY B 152 ILE B 166 C 3 HIS B 69 ? VAL B 77 ? HIS B 169 VAL B 177 C 4 VAL B 32 ? ILE B 33 ? VAL B 132 ILE B 133 C 5 ILE B 84 ? ILE B 85 ? ILE B 184 ILE B 185 C 6 GLN B 18 ? LEU B 24 ? GLN B 118 LEU B 124 C 7 LEU B 10 ? ILE B 15 ? LEU B 110 ILE B 115 C 8 GLY B 52 ? ILE B 66 ? GLY B 152 ILE B 166 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 3 ? N ILE A 3 O LEU B 97 ? O LEU B 197 A 2 3 O ASN B 98 ? O ASN B 198 N THR A 96 ? N THR A 96 A 3 4 N LEU A 97 ? N LEU A 97 O ILE B 3 ? O ILE B 103 B 1 2 N LYS A 43 ? N LYS A 43 O GLN A 58 ? O GLN A 58 B 2 3 N ILE A 62 ? N ILE A 62 O GLY A 73 ? O GLY A 73 B 3 4 O LEU A 76 ? O LEU A 76 N ILE A 33 ? N ILE A 33 B 4 5 N VAL A 32 ? N VAL A 32 O ILE A 84 ? O ILE A 84 B 5 6 O ILE A 85 ? O ILE A 85 N LEU A 23 ? N LEU A 23 B 6 7 O LYS A 20 ? O LYS A 20 N ILE A 13 ? N ILE A 13 B 7 8 N LYS A 14 ? N LYS A 14 O GLU A 65 ? O GLU A 65 C 1 2 N LYS B 43 ? N LYS B 143 O GLN B 58 ? O GLN B 158 C 2 3 N ILE B 66 ? N ILE B 166 O HIS B 69 ? O HIS B 169 C 3 4 O LEU B 76 ? O LEU B 176 N ILE B 33 ? N ILE B 133 C 4 5 N VAL B 32 ? N VAL B 132 O ILE B 84 ? O ILE B 184 C 5 6 O ILE B 85 ? O ILE B 185 N LEU B 23 ? N LEU B 123 C 6 7 O LYS B 20 ? O LYS B 120 N ILE B 13 ? N ILE B 113 C 7 8 N LYS B 14 ? N LYS B 114 O GLU B 65 ? O GLU B 165 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B 2NC 400 ? 30 'BINDING SITE FOR RESIDUE 2NC B 400' AC2 Software A DMS 905 ? 6 'BINDING SITE FOR RESIDUE DMS A 905' AC3 Software B GOL 801 ? 9 'BINDING SITE FOR RESIDUE GOL B 801' AC4 Software B GOL 802 ? 6 'BINDING SITE FOR RESIDUE GOL B 802' AC5 Software B GOL 803 ? 6 'BINDING SITE FOR RESIDUE GOL B 803' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 30 ARG A 8 ? ARG A 8 . ? 1_555 ? 2 AC1 30 ASP A 25 ? ASP A 25 . ? 1_555 ? 3 AC1 30 GLY A 27 ? GLY A 27 . ? 1_555 ? 4 AC1 30 ALA A 28 ? ALA A 28 . ? 1_555 ? 5 AC1 30 ASP A 29 ? ASP A 29 . ? 1_555 ? 6 AC1 30 GLY A 48 ? GLY A 48 . ? 1_555 ? 7 AC1 30 GLY A 49 ? GLY A 49 . ? 1_555 ? 8 AC1 30 ILE A 50 ? ILE A 50 . ? 1_555 ? 9 AC1 30 VAL A 82 ? VAL A 82 . ? 1_555 ? 10 AC1 30 HOH I . ? HOH A 1185 . ? 1_555 ? 11 AC1 30 ARG B 8 ? ARG B 108 . ? 1_555 ? 12 AC1 30 ASP B 25 ? ASP B 125 . ? 1_555 ? 13 AC1 30 GLY B 27 ? GLY B 127 . ? 1_555 ? 14 AC1 30 ALA B 28 ? ALA B 128 . ? 1_555 ? 15 AC1 30 ASP B 29 ? ASP B 129 . ? 1_555 ? 16 AC1 30 ASP B 30 ? ASP B 130 . ? 1_555 ? 17 AC1 30 ILE B 47 ? ILE B 147 . ? 1_555 ? 18 AC1 30 GLY B 48 ? GLY B 148 . ? 1_555 ? 19 AC1 30 GLY B 49 ? GLY B 149 . ? 1_555 ? 20 AC1 30 PRO B 81 ? PRO B 181 . ? 1_555 ? 21 AC1 30 VAL B 82 ? VAL B 182 . ? 1_555 ? 22 AC1 30 HOH J . ? HOH B 1004 . ? 1_555 ? 23 AC1 30 HOH J . ? HOH B 1014 . ? 1_555 ? 24 AC1 30 HOH J . ? HOH B 1025 . ? 1_555 ? 25 AC1 30 HOH J . ? HOH B 1027 . ? 1_555 ? 26 AC1 30 HOH J . ? HOH B 1041 . ? 4_556 ? 27 AC1 30 HOH J . ? HOH B 1043 . ? 1_555 ? 28 AC1 30 HOH J . ? HOH B 1087 . ? 1_555 ? 29 AC1 30 HOH J . ? HOH B 1154 . ? 1_555 ? 30 AC1 30 HOH J . ? HOH B 1168 . ? 1_555 ? 31 AC2 6 ARG A 87 ? ARG A 87 . ? 1_555 ? 32 AC2 6 ASN A 88 ? ASN A 88 . ? 1_555 ? 33 AC2 6 THR A 91 ? THR A 91 . ? 1_555 ? 34 AC2 6 LEU B 5 ? LEU B 105 . ? 1_555 ? 35 AC2 6 TRP B 6 ? TRP B 106 . ? 1_555 ? 36 AC2 6 ARG B 41 ? ARG B 141 . ? 3_556 ? 37 AC3 9 GLN A 18 ? GLN A 18 . ? 1_556 ? 38 AC3 9 MET A 36 ? MET A 36 . ? 1_556 ? 39 AC3 9 SER A 37 ? SER A 37 . ? 1_556 ? 40 AC3 9 THR B 12 ? THR B 112 . ? 1_555 ? 41 AC3 9 ILE B 13 ? ILE B 113 . ? 1_555 ? 42 AC3 9 LYS B 14 ? LYS B 114 . ? 1_555 ? 43 AC3 9 GLU B 65 ? GLU B 165 . ? 1_555 ? 44 AC3 9 ALA B 67 ? ALA B 167 . ? 1_555 ? 45 AC3 9 GLY B 68 ? GLY B 168 . ? 1_555 ? 46 AC4 6 LYS A 45 ? LYS A 45 . ? 4_456 ? 47 AC4 6 MET A 46 ? MET A 46 . ? 4_456 ? 48 AC4 6 PHE A 53 ? PHE A 53 . ? 4_456 ? 49 AC4 6 HOH J . ? HOH B 1003 . ? 1_555 ? 50 AC4 6 HOH J . ? HOH B 1011 . ? 1_555 ? 51 AC4 6 HOH J . ? HOH B 1041 . ? 1_555 ? 52 AC5 6 GLU B 35 ? GLU B 135 . ? 1_555 ? 53 AC5 6 LYS B 55 ? LYS B 155 . ? 1_555 ? 54 AC5 6 ARG B 57 ? ARG B 157 . ? 1_555 ? 55 AC5 6 VAL B 77 ? VAL B 177 . ? 1_555 ? 56 AC5 6 GLY B 78 ? GLY B 178 . ? 1_555 ? 57 AC5 6 HOH J . ? HOH B 1133 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE1 _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 165 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 B _pdbx_validate_close_contact.auth_atom_id_2 O2 _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 GOL _pdbx_validate_close_contact.auth_seq_id_2 801 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.90 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 41 ? B CZ A ARG 41 ? B NH1 A ARG 41 ? B 123.54 120.30 3.24 0.50 N 2 1 NE A ARG 41 ? B CZ A ARG 41 ? B NH2 A ARG 41 ? B 116.53 120.30 -3.77 0.50 N 3 1 CD A ARG 57 ? A NE A ARG 57 ? A CZ A ARG 57 ? A 136.52 123.60 12.92 1.40 N 4 1 NE A ARG 87 ? ? CZ A ARG 87 ? ? NH1 A ARG 87 ? ? 123.49 120.30 3.19 0.50 N 5 1 CD B ARG 108 ? A NE B ARG 108 ? A CZ B ARG 108 ? A 135.72 123.60 12.12 1.40 N 6 1 NE B ARG 108 ? A CZ B ARG 108 ? A NH1 B ARG 108 ? A 124.24 120.30 3.94 0.50 N 7 1 NE B ARG 141 ? ? CZ B ARG 141 ? ? NH1 B ARG 141 ? ? 124.48 120.30 4.18 0.50 N # _pdbx_molecule_features.prd_id PRD_000398 _pdbx_molecule_features.name 'N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000398 _pdbx_molecule.asym_id E # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 1158 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id I _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_entry_details.entry_id 2AOD _pdbx_entry_details.sequence_details ? _pdbx_entry_details.nonpolymer_details ;ACCORDING TO THE AUTHORS THE ATOM MARKED AS UNX IN THE COORDINATES IS AN IMPURITY OBSERVED IN THE ELECTRON DENSITY MAP AND IS MODELED WITH PARTIAL OCCUPANCY. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2NC C C N N 1 2NC O O N N 2 2NC CH3 C N N 3 2NC N N N N 4 2NC CA C N S 5 2NC C1 C N N 6 2NC O1 O N N 7 2NC CB C N R 8 2NC OG1 O N N 9 2NC CG2 C N N 10 2NC N1 N N N 11 2NC CA1 C N S 12 2NC C2 C N N 13 2NC O2 O N N 14 2NC CB1 C N S 15 2NC CG1 C N N 16 2NC CG21 C N N 17 2NC CD1 C N N 18 2NC N2 N N N 19 2NC CA2 C N S 20 2NC C3 C N N 21 2NC CB2 C N N 22 2NC CG C N N 23 2NC CD C N N 24 2NC CE C N N 25 2NC N3 N N N 26 2NC CA3 C N S 27 2NC C4 C N N 28 2NC O3 O N N 29 2NC CB3 C N N 30 2NC CG3 C N N 31 2NC CD2 C N N 32 2NC CE1 C N N 33 2NC N4 N N N 34 2NC CA4 C N S 35 2NC C5 C N N 36 2NC O4 O N N 37 2NC CB4 C N N 38 2NC CG4 C N N 39 2NC CD3 C N N 40 2NC OE1 O N N 41 2NC NE2 N N N 42 2NC N5 N N N 43 2NC CA5 C N S 44 2NC C6 C N N 45 2NC O5 O N N 46 2NC CB5 C N N 47 2NC CG5 C N N 48 2NC CD4 C N N 49 2NC NE N N N 50 2NC CZ C N N 51 2NC NH1 N N N 52 2NC NH2 N N N 53 2NC N6 N N N 54 2NC H1 H N N 55 2NC H2 H N N 56 2NC H3 H N N 57 2NC H H N N 58 2NC HA H N N 59 2NC HB H N N 60 2NC HG1 H N N 61 2NC HG21 H N N 62 2NC HG22 H N N 63 2NC HG23 H N N 64 2NC H4 H N N 65 2NC HA1 H N N 66 2NC HB1 H N N 67 2NC HG12 H N N 68 2NC HG13 H N N 69 2NC HG24 H N N 70 2NC HG25 H N N 71 2NC HG26 H N N 72 2NC HD11 H N N 73 2NC HD12 H N N 74 2NC HD13 H N N 75 2NC H5 H N N 76 2NC HA2 H N N 77 2NC HC31 H N N 78 2NC HC32 H N N 79 2NC HB2 H N N 80 2NC HB3 H N N 81 2NC HG2 H N N 82 2NC HG3 H N N 83 2NC HD2 H N N 84 2NC HD3 H N N 85 2NC HE1 H N N 86 2NC HE2 H N N 87 2NC HE3 H N N 88 2NC H6 H N N 89 2NC HA3 H N N 90 2NC HB21 H N N 91 2NC HB31 H N N 92 2NC HG27 H N N 93 2NC HG31 H N N 94 2NC HD21 H N N 95 2NC HD31 H N N 96 2NC HE11 H N N 97 2NC HE21 H N N 98 2NC HE31 H N N 99 2NC H7 H N N 100 2NC HA4 H N N 101 2NC HB22 H N N 102 2NC HB32 H N N 103 2NC HG28 H N N 104 2NC HG32 H N N 105 2NC HE22 H N N 106 2NC HE23 H N N 107 2NC H8 H N N 108 2NC HA5 H N N 109 2NC HB23 H N N 110 2NC HB33 H N N 111 2NC HG29 H N N 112 2NC HG33 H N N 113 2NC HD22 H N N 114 2NC HD32 H N N 115 2NC HE H N N 116 2NC HH11 H N N 117 2NC HH12 H N N 118 2NC HH21 H N N 119 2NC HH22 H N N 120 2NC HN1 H N N 121 2NC HN2 H N N 122 ALA N N N N 123 ALA CA C N S 124 ALA C C N N 125 ALA O O N N 126 ALA CB C N N 127 ALA OXT O N N 128 ALA H H N N 129 ALA H2 H N N 130 ALA HA H N N 131 ALA HB1 H N N 132 ALA HB2 H N N 133 ALA HB3 H N N 134 ALA HXT H N N 135 ARG N N N N 136 ARG CA C N S 137 ARG C C N N 138 ARG O O N N 139 ARG CB C N N 140 ARG CG C N N 141 ARG CD C N N 142 ARG NE N N N 143 ARG CZ C N N 144 ARG NH1 N N N 145 ARG NH2 N N N 146 ARG OXT O N N 147 ARG H H N N 148 ARG H2 H N N 149 ARG HA H N N 150 ARG HB2 H N N 151 ARG HB3 H N N 152 ARG HG2 H N N 153 ARG HG3 H N N 154 ARG HD2 H N N 155 ARG HD3 H N N 156 ARG HE H N N 157 ARG HH11 H N N 158 ARG HH12 H N N 159 ARG HH21 H N N 160 ARG HH22 H N N 161 ARG HXT H N N 162 ASN N N N N 163 ASN CA C N S 164 ASN C C N N 165 ASN O O N N 166 ASN CB C N N 167 ASN CG C N N 168 ASN OD1 O N N 169 ASN ND2 N N N 170 ASN OXT O N N 171 ASN H H N N 172 ASN H2 H N N 173 ASN HA H N N 174 ASN HB2 H N N 175 ASN HB3 H N N 176 ASN HD21 H N N 177 ASN HD22 H N N 178 ASN HXT H N N 179 ASP N N N N 180 ASP CA C N S 181 ASP C C N N 182 ASP O O N N 183 ASP CB C N N 184 ASP CG C N N 185 ASP OD1 O N N 186 ASP OD2 O N N 187 ASP OXT O N N 188 ASP H H N N 189 ASP H2 H N N 190 ASP HA H N N 191 ASP HB2 H N N 192 ASP HB3 H N N 193 ASP HD2 H N N 194 ASP HXT H N N 195 CYS N N N N 196 CYS CA C N R 197 CYS C C N N 198 CYS O O N N 199 CYS CB C N N 200 CYS SG S N N 201 CYS OXT O N N 202 CYS H H N N 203 CYS H2 H N N 204 CYS HA H N N 205 CYS HB2 H N N 206 CYS HB3 H N N 207 CYS HG H N N 208 CYS HXT H N N 209 DMS S S N N 210 DMS O O N N 211 DMS C1 C N N 212 DMS C2 C N N 213 DMS H11 H N N 214 DMS H12 H N N 215 DMS H13 H N N 216 DMS H21 H N N 217 DMS H22 H N N 218 DMS H23 H N N 219 GLN N N N N 220 GLN CA C N S 221 GLN C C N N 222 GLN O O N N 223 GLN CB C N N 224 GLN CG C N N 225 GLN CD C N N 226 GLN OE1 O N N 227 GLN NE2 N N N 228 GLN OXT O N N 229 GLN H H N N 230 GLN H2 H N N 231 GLN HA H N N 232 GLN HB2 H N N 233 GLN HB3 H N N 234 GLN HG2 H N N 235 GLN HG3 H N N 236 GLN HE21 H N N 237 GLN HE22 H N N 238 GLN HXT H N N 239 GLU N N N N 240 GLU CA C N S 241 GLU C C N N 242 GLU O O N N 243 GLU CB C N N 244 GLU CG C N N 245 GLU CD C N N 246 GLU OE1 O N N 247 GLU OE2 O N N 248 GLU OXT O N N 249 GLU H H N N 250 GLU H2 H N N 251 GLU HA H N N 252 GLU HB2 H N N 253 GLU HB3 H N N 254 GLU HG2 H N N 255 GLU HG3 H N N 256 GLU HE2 H N N 257 GLU HXT H N N 258 GLY N N N N 259 GLY CA C N N 260 GLY C C N N 261 GLY O O N N 262 GLY OXT O N N 263 GLY H H N N 264 GLY H2 H N N 265 GLY HA2 H N N 266 GLY HA3 H N N 267 GLY HXT H N N 268 GOL C1 C N N 269 GOL O1 O N N 270 GOL C2 C N N 271 GOL O2 O N N 272 GOL C3 C N N 273 GOL O3 O N N 274 GOL H11 H N N 275 GOL H12 H N N 276 GOL HO1 H N N 277 GOL H2 H N N 278 GOL HO2 H N N 279 GOL H31 H N N 280 GOL H32 H N N 281 GOL HO3 H N N 282 HIS N N N N 283 HIS CA C N S 284 HIS C C N N 285 HIS O O N N 286 HIS CB C N N 287 HIS CG C Y N 288 HIS ND1 N Y N 289 HIS CD2 C Y N 290 HIS CE1 C Y N 291 HIS NE2 N Y N 292 HIS OXT O N N 293 HIS H H N N 294 HIS H2 H N N 295 HIS HA H N N 296 HIS HB2 H N N 297 HIS HB3 H N N 298 HIS HD1 H N N 299 HIS HD2 H N N 300 HIS HE1 H N N 301 HIS HE2 H N N 302 HIS HXT H N N 303 HOH O O N N 304 HOH H1 H N N 305 HOH H2 H N N 306 ILE N N N N 307 ILE CA C N S 308 ILE C C N N 309 ILE O O N N 310 ILE CB C N S 311 ILE CG1 C N N 312 ILE CG2 C N N 313 ILE CD1 C N N 314 ILE OXT O N N 315 ILE H H N N 316 ILE H2 H N N 317 ILE HA H N N 318 ILE HB H N N 319 ILE HG12 H N N 320 ILE HG13 H N N 321 ILE HG21 H N N 322 ILE HG22 H N N 323 ILE HG23 H N N 324 ILE HD11 H N N 325 ILE HD12 H N N 326 ILE HD13 H N N 327 ILE HXT H N N 328 LEU N N N N 329 LEU CA C N S 330 LEU C C N N 331 LEU O O N N 332 LEU CB C N N 333 LEU CG C N N 334 LEU CD1 C N N 335 LEU CD2 C N N 336 LEU OXT O N N 337 LEU H H N N 338 LEU H2 H N N 339 LEU HA H N N 340 LEU HB2 H N N 341 LEU HB3 H N N 342 LEU HG H N N 343 LEU HD11 H N N 344 LEU HD12 H N N 345 LEU HD13 H N N 346 LEU HD21 H N N 347 LEU HD22 H N N 348 LEU HD23 H N N 349 LEU HXT H N N 350 LYS N N N N 351 LYS CA C N S 352 LYS C C N N 353 LYS O O N N 354 LYS CB C N N 355 LYS CG C N N 356 LYS CD C N N 357 LYS CE C N N 358 LYS NZ N N N 359 LYS OXT O N N 360 LYS H H N N 361 LYS H2 H N N 362 LYS HA H N N 363 LYS HB2 H N N 364 LYS HB3 H N N 365 LYS HG2 H N N 366 LYS HG3 H N N 367 LYS HD2 H N N 368 LYS HD3 H N N 369 LYS HE2 H N N 370 LYS HE3 H N N 371 LYS HZ1 H N N 372 LYS HZ2 H N N 373 LYS HZ3 H N N 374 LYS HXT H N N 375 MET N N N N 376 MET CA C N S 377 MET C C N N 378 MET O O N N 379 MET CB C N N 380 MET CG C N N 381 MET SD S N N 382 MET CE C N N 383 MET OXT O N N 384 MET H H N N 385 MET H2 H N N 386 MET HA H N N 387 MET HB2 H N N 388 MET HB3 H N N 389 MET HG2 H N N 390 MET HG3 H N N 391 MET HE1 H N N 392 MET HE2 H N N 393 MET HE3 H N N 394 MET HXT H N N 395 PHE N N N N 396 PHE CA C N S 397 PHE C C N N 398 PHE O O N N 399 PHE CB C N N 400 PHE CG C Y N 401 PHE CD1 C Y N 402 PHE CD2 C Y N 403 PHE CE1 C Y N 404 PHE CE2 C Y N 405 PHE CZ C Y N 406 PHE OXT O N N 407 PHE H H N N 408 PHE H2 H N N 409 PHE HA H N N 410 PHE HB2 H N N 411 PHE HB3 H N N 412 PHE HD1 H N N 413 PHE HD2 H N N 414 PHE HE1 H N N 415 PHE HE2 H N N 416 PHE HZ H N N 417 PHE HXT H N N 418 PRO N N N N 419 PRO CA C N S 420 PRO C C N N 421 PRO O O N N 422 PRO CB C N N 423 PRO CG C N N 424 PRO CD C N N 425 PRO OXT O N N 426 PRO H H N N 427 PRO HA H N N 428 PRO HB2 H N N 429 PRO HB3 H N N 430 PRO HG2 H N N 431 PRO HG3 H N N 432 PRO HD2 H N N 433 PRO HD3 H N N 434 PRO HXT H N N 435 SER N N N N 436 SER CA C N S 437 SER C C N N 438 SER O O N N 439 SER CB C N N 440 SER OG O N N 441 SER OXT O N N 442 SER H H N N 443 SER H2 H N N 444 SER HA H N N 445 SER HB2 H N N 446 SER HB3 H N N 447 SER HG H N N 448 SER HXT H N N 449 THR N N N N 450 THR CA C N S 451 THR C C N N 452 THR O O N N 453 THR CB C N R 454 THR OG1 O N N 455 THR CG2 C N N 456 THR OXT O N N 457 THR H H N N 458 THR H2 H N N 459 THR HA H N N 460 THR HB H N N 461 THR HG1 H N N 462 THR HG21 H N N 463 THR HG22 H N N 464 THR HG23 H N N 465 THR HXT H N N 466 TRP N N N N 467 TRP CA C N S 468 TRP C C N N 469 TRP O O N N 470 TRP CB C N N 471 TRP CG C Y N 472 TRP CD1 C Y N 473 TRP CD2 C Y N 474 TRP NE1 N Y N 475 TRP CE2 C Y N 476 TRP CE3 C Y N 477 TRP CZ2 C Y N 478 TRP CZ3 C Y N 479 TRP CH2 C Y N 480 TRP OXT O N N 481 TRP H H N N 482 TRP H2 H N N 483 TRP HA H N N 484 TRP HB2 H N N 485 TRP HB3 H N N 486 TRP HD1 H N N 487 TRP HE1 H N N 488 TRP HE3 H N N 489 TRP HZ2 H N N 490 TRP HZ3 H N N 491 TRP HH2 H N N 492 TRP HXT H N N 493 TYR N N N N 494 TYR CA C N S 495 TYR C C N N 496 TYR O O N N 497 TYR CB C N N 498 TYR CG C Y N 499 TYR CD1 C Y N 500 TYR CD2 C Y N 501 TYR CE1 C Y N 502 TYR CE2 C Y N 503 TYR CZ C Y N 504 TYR OH O N N 505 TYR OXT O N N 506 TYR H H N N 507 TYR H2 H N N 508 TYR HA H N N 509 TYR HB2 H N N 510 TYR HB3 H N N 511 TYR HD1 H N N 512 TYR HD2 H N N 513 TYR HE1 H N N 514 TYR HE2 H N N 515 TYR HH H N N 516 TYR HXT H N N 517 VAL N N N N 518 VAL CA C N S 519 VAL C C N N 520 VAL O O N N 521 VAL CB C N N 522 VAL CG1 C N N 523 VAL CG2 C N N 524 VAL OXT O N N 525 VAL H H N N 526 VAL H2 H N N 527 VAL HA H N N 528 VAL HB H N N 529 VAL HG11 H N N 530 VAL HG12 H N N 531 VAL HG13 H N N 532 VAL HG21 H N N 533 VAL HG22 H N N 534 VAL HG23 H N N 535 VAL HXT H N N 536 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2NC C O doub N N 1 2NC C CH3 sing N N 2 2NC CH3 H1 sing N N 3 2NC CH3 H2 sing N N 4 2NC CH3 H3 sing N N 5 2NC N CA sing N N 6 2NC N H sing N N 7 2NC CA C1 sing N N 8 2NC CA CB sing N N 9 2NC CA HA sing N N 10 2NC C1 O1 doub N N 11 2NC CB OG1 sing N N 12 2NC CB CG2 sing N N 13 2NC CB HB sing N N 14 2NC OG1 HG1 sing N N 15 2NC CG2 HG21 sing N N 16 2NC CG2 HG22 sing N N 17 2NC CG2 HG23 sing N N 18 2NC N1 CA1 sing N N 19 2NC N1 H4 sing N N 20 2NC CA1 C2 sing N N 21 2NC CA1 CB1 sing N N 22 2NC CA1 HA1 sing N N 23 2NC C2 O2 doub N N 24 2NC CB1 CG1 sing N N 25 2NC CB1 CG21 sing N N 26 2NC CB1 HB1 sing N N 27 2NC CG1 CD1 sing N N 28 2NC CG1 HG12 sing N N 29 2NC CG1 HG13 sing N N 30 2NC CG21 HG24 sing N N 31 2NC CG21 HG25 sing N N 32 2NC CG21 HG26 sing N N 33 2NC CD1 HD11 sing N N 34 2NC CD1 HD12 sing N N 35 2NC CD1 HD13 sing N N 36 2NC N2 CA2 sing N N 37 2NC N2 H5 sing N N 38 2NC CA2 C3 sing N N 39 2NC CA2 CB2 sing N N 40 2NC CA2 HA2 sing N N 41 2NC CB2 CG sing N N 42 2NC CB2 HB2 sing N N 43 2NC CB2 HB3 sing N N 44 2NC CG CD sing N N 45 2NC CG HG2 sing N N 46 2NC CG HG3 sing N N 47 2NC CD CE sing N N 48 2NC CD HD2 sing N N 49 2NC CD HD3 sing N N 50 2NC CE HE1 sing N N 51 2NC CE HE2 sing N N 52 2NC CE HE3 sing N N 53 2NC N3 CA3 sing N N 54 2NC N3 H6 sing N N 55 2NC CA3 C4 sing N N 56 2NC CA3 CB3 sing N N 57 2NC CA3 HA3 sing N N 58 2NC C4 O3 doub N N 59 2NC CB3 CG3 sing N N 60 2NC CB3 HB21 sing N N 61 2NC CB3 HB31 sing N N 62 2NC CG3 CD2 sing N N 63 2NC CG3 HG27 sing N N 64 2NC CG3 HG31 sing N N 65 2NC CD2 CE1 sing N N 66 2NC CD2 HD21 sing N N 67 2NC CD2 HD31 sing N N 68 2NC CE1 HE11 sing N N 69 2NC CE1 HE21 sing N N 70 2NC CE1 HE31 sing N N 71 2NC N4 CA4 sing N N 72 2NC N4 H7 sing N N 73 2NC CA4 C5 sing N N 74 2NC CA4 CB4 sing N N 75 2NC CA4 HA4 sing N N 76 2NC C5 O4 doub N N 77 2NC CB4 CG4 sing N N 78 2NC CB4 HB22 sing N N 79 2NC CB4 HB32 sing N N 80 2NC CG4 CD3 sing N N 81 2NC CG4 HG28 sing N N 82 2NC CG4 HG32 sing N N 83 2NC CD3 OE1 doub N N 84 2NC CD3 NE2 sing N N 85 2NC NE2 HE22 sing N N 86 2NC NE2 HE23 sing N N 87 2NC N5 CA5 sing N N 88 2NC N5 H8 sing N N 89 2NC CA5 C6 sing N N 90 2NC CA5 CB5 sing N N 91 2NC CA5 HA5 sing N N 92 2NC C6 O5 doub N N 93 2NC CB5 CG5 sing N N 94 2NC CB5 HB23 sing N N 95 2NC CB5 HB33 sing N N 96 2NC CG5 CD4 sing N N 97 2NC CG5 HG29 sing N N 98 2NC CG5 HG33 sing N N 99 2NC CD4 NE sing N N 100 2NC CD4 HD22 sing N N 101 2NC CD4 HD32 sing N N 102 2NC NE CZ sing N N 103 2NC NE HE sing N N 104 2NC CZ NH1 sing N N 105 2NC CZ NH2 doub N N 106 2NC NH1 HH11 sing N N 107 2NC NH1 HH12 sing N N 108 2NC NH2 HH21 sing N N 109 2NC NH2 HH22 sing N N 110 2NC N6 HN1 sing N N 111 2NC N6 HN2 sing N N 112 2NC C N sing N N 113 2NC C1 N1 sing N N 114 2NC C2 N2 sing N N 115 2NC C3 N3 sing N N 116 2NC C4 N4 sing N N 117 2NC C5 N5 sing N N 118 2NC C3 HC31 sing N N 119 2NC C3 HC32 sing N N 120 2NC C6 N6 sing N N 121 ALA N CA sing N N 122 ALA N H sing N N 123 ALA N H2 sing N N 124 ALA CA C sing N N 125 ALA CA CB sing N N 126 ALA CA HA sing N N 127 ALA C O doub N N 128 ALA C OXT sing N N 129 ALA CB HB1 sing N N 130 ALA CB HB2 sing N N 131 ALA CB HB3 sing N N 132 ALA OXT HXT sing N N 133 ARG N CA sing N N 134 ARG N H sing N N 135 ARG N H2 sing N N 136 ARG CA C sing N N 137 ARG CA CB sing N N 138 ARG CA HA sing N N 139 ARG C O doub N N 140 ARG C OXT sing N N 141 ARG CB CG sing N N 142 ARG CB HB2 sing N N 143 ARG CB HB3 sing N N 144 ARG CG CD sing N N 145 ARG CG HG2 sing N N 146 ARG CG HG3 sing N N 147 ARG CD NE sing N N 148 ARG CD HD2 sing N N 149 ARG CD HD3 sing N N 150 ARG NE CZ sing N N 151 ARG NE HE sing N N 152 ARG CZ NH1 sing N N 153 ARG CZ NH2 doub N N 154 ARG NH1 HH11 sing N N 155 ARG NH1 HH12 sing N N 156 ARG NH2 HH21 sing N N 157 ARG NH2 HH22 sing N N 158 ARG OXT HXT sing N N 159 ASN N CA sing N N 160 ASN N H sing N N 161 ASN N H2 sing N N 162 ASN CA C sing N N 163 ASN CA CB sing N N 164 ASN CA HA sing N N 165 ASN C O doub N N 166 ASN C OXT sing N N 167 ASN CB CG sing N N 168 ASN CB HB2 sing N N 169 ASN CB HB3 sing N N 170 ASN CG OD1 doub N N 171 ASN CG ND2 sing N N 172 ASN ND2 HD21 sing N N 173 ASN ND2 HD22 sing N N 174 ASN OXT HXT sing N N 175 ASP N CA sing N N 176 ASP N H sing N N 177 ASP N H2 sing N N 178 ASP CA C sing N N 179 ASP CA CB sing N N 180 ASP CA HA sing N N 181 ASP C O doub N N 182 ASP C OXT sing N N 183 ASP CB CG sing N N 184 ASP CB HB2 sing N N 185 ASP CB HB3 sing N N 186 ASP CG OD1 doub N N 187 ASP CG OD2 sing N N 188 ASP OD2 HD2 sing N N 189 ASP OXT HXT sing N N 190 CYS N CA sing N N 191 CYS N H sing N N 192 CYS N H2 sing N N 193 CYS CA C sing N N 194 CYS CA CB sing N N 195 CYS CA HA sing N N 196 CYS C O doub N N 197 CYS C OXT sing N N 198 CYS CB SG sing N N 199 CYS CB HB2 sing N N 200 CYS CB HB3 sing N N 201 CYS SG HG sing N N 202 CYS OXT HXT sing N N 203 DMS S O doub N N 204 DMS S C1 sing N N 205 DMS S C2 sing N N 206 DMS C1 H11 sing N N 207 DMS C1 H12 sing N N 208 DMS C1 H13 sing N N 209 DMS C2 H21 sing N N 210 DMS C2 H22 sing N N 211 DMS C2 H23 sing N N 212 GLN N CA sing N N 213 GLN N H sing N N 214 GLN N H2 sing N N 215 GLN CA C sing N N 216 GLN CA CB sing N N 217 GLN CA HA sing N N 218 GLN C O doub N N 219 GLN C OXT sing N N 220 GLN CB CG sing N N 221 GLN CB HB2 sing N N 222 GLN CB HB3 sing N N 223 GLN CG CD sing N N 224 GLN CG HG2 sing N N 225 GLN CG HG3 sing N N 226 GLN CD OE1 doub N N 227 GLN CD NE2 sing N N 228 GLN NE2 HE21 sing N N 229 GLN NE2 HE22 sing N N 230 GLN OXT HXT sing N N 231 GLU N CA sing N N 232 GLU N H sing N N 233 GLU N H2 sing N N 234 GLU CA C sing N N 235 GLU CA CB sing N N 236 GLU CA HA sing N N 237 GLU C O doub N N 238 GLU C OXT sing N N 239 GLU CB CG sing N N 240 GLU CB HB2 sing N N 241 GLU CB HB3 sing N N 242 GLU CG CD sing N N 243 GLU CG HG2 sing N N 244 GLU CG HG3 sing N N 245 GLU CD OE1 doub N N 246 GLU CD OE2 sing N N 247 GLU OE2 HE2 sing N N 248 GLU OXT HXT sing N N 249 GLY N CA sing N N 250 GLY N H sing N N 251 GLY N H2 sing N N 252 GLY CA C sing N N 253 GLY CA HA2 sing N N 254 GLY CA HA3 sing N N 255 GLY C O doub N N 256 GLY C OXT sing N N 257 GLY OXT HXT sing N N 258 GOL C1 O1 sing N N 259 GOL C1 C2 sing N N 260 GOL C1 H11 sing N N 261 GOL C1 H12 sing N N 262 GOL O1 HO1 sing N N 263 GOL C2 O2 sing N N 264 GOL C2 C3 sing N N 265 GOL C2 H2 sing N N 266 GOL O2 HO2 sing N N 267 GOL C3 O3 sing N N 268 GOL C3 H31 sing N N 269 GOL C3 H32 sing N N 270 GOL O3 HO3 sing N N 271 HIS N CA sing N N 272 HIS N H sing N N 273 HIS N H2 sing N N 274 HIS CA C sing N N 275 HIS CA CB sing N N 276 HIS CA HA sing N N 277 HIS C O doub N N 278 HIS C OXT sing N N 279 HIS CB CG sing N N 280 HIS CB HB2 sing N N 281 HIS CB HB3 sing N N 282 HIS CG ND1 sing Y N 283 HIS CG CD2 doub Y N 284 HIS ND1 CE1 doub Y N 285 HIS ND1 HD1 sing N N 286 HIS CD2 NE2 sing Y N 287 HIS CD2 HD2 sing N N 288 HIS CE1 NE2 sing Y N 289 HIS CE1 HE1 sing N N 290 HIS NE2 HE2 sing N N 291 HIS OXT HXT sing N N 292 HOH O H1 sing N N 293 HOH O H2 sing N N 294 ILE N CA sing N N 295 ILE N H sing N N 296 ILE N H2 sing N N 297 ILE CA C sing N N 298 ILE CA CB sing N N 299 ILE CA HA sing N N 300 ILE C O doub N N 301 ILE C OXT sing N N 302 ILE CB CG1 sing N N 303 ILE CB CG2 sing N N 304 ILE CB HB sing N N 305 ILE CG1 CD1 sing N N 306 ILE CG1 HG12 sing N N 307 ILE CG1 HG13 sing N N 308 ILE CG2 HG21 sing N N 309 ILE CG2 HG22 sing N N 310 ILE CG2 HG23 sing N N 311 ILE CD1 HD11 sing N N 312 ILE CD1 HD12 sing N N 313 ILE CD1 HD13 sing N N 314 ILE OXT HXT sing N N 315 LEU N CA sing N N 316 LEU N H sing N N 317 LEU N H2 sing N N 318 LEU CA C sing N N 319 LEU CA CB sing N N 320 LEU CA HA sing N N 321 LEU C O doub N N 322 LEU C OXT sing N N 323 LEU CB CG sing N N 324 LEU CB HB2 sing N N 325 LEU CB HB3 sing N N 326 LEU CG CD1 sing N N 327 LEU CG CD2 sing N N 328 LEU CG HG sing N N 329 LEU CD1 HD11 sing N N 330 LEU CD1 HD12 sing N N 331 LEU CD1 HD13 sing N N 332 LEU CD2 HD21 sing N N 333 LEU CD2 HD22 sing N N 334 LEU CD2 HD23 sing N N 335 LEU OXT HXT sing N N 336 LYS N CA sing N N 337 LYS N H sing N N 338 LYS N H2 sing N N 339 LYS CA C sing N N 340 LYS CA CB sing N N 341 LYS CA HA sing N N 342 LYS C O doub N N 343 LYS C OXT sing N N 344 LYS CB CG sing N N 345 LYS CB HB2 sing N N 346 LYS CB HB3 sing N N 347 LYS CG CD sing N N 348 LYS CG HG2 sing N N 349 LYS CG HG3 sing N N 350 LYS CD CE sing N N 351 LYS CD HD2 sing N N 352 LYS CD HD3 sing N N 353 LYS CE NZ sing N N 354 LYS CE HE2 sing N N 355 LYS CE HE3 sing N N 356 LYS NZ HZ1 sing N N 357 LYS NZ HZ2 sing N N 358 LYS NZ HZ3 sing N N 359 LYS OXT HXT sing N N 360 MET N CA sing N N 361 MET N H sing N N 362 MET N H2 sing N N 363 MET CA C sing N N 364 MET CA CB sing N N 365 MET CA HA sing N N 366 MET C O doub N N 367 MET C OXT sing N N 368 MET CB CG sing N N 369 MET CB HB2 sing N N 370 MET CB HB3 sing N N 371 MET CG SD sing N N 372 MET CG HG2 sing N N 373 MET CG HG3 sing N N 374 MET SD CE sing N N 375 MET CE HE1 sing N N 376 MET CE HE2 sing N N 377 MET CE HE3 sing N N 378 MET OXT HXT sing N N 379 PHE N CA sing N N 380 PHE N H sing N N 381 PHE N H2 sing N N 382 PHE CA C sing N N 383 PHE CA CB sing N N 384 PHE CA HA sing N N 385 PHE C O doub N N 386 PHE C OXT sing N N 387 PHE CB CG sing N N 388 PHE CB HB2 sing N N 389 PHE CB HB3 sing N N 390 PHE CG CD1 doub Y N 391 PHE CG CD2 sing Y N 392 PHE CD1 CE1 sing Y N 393 PHE CD1 HD1 sing N N 394 PHE CD2 CE2 doub Y N 395 PHE CD2 HD2 sing N N 396 PHE CE1 CZ doub Y N 397 PHE CE1 HE1 sing N N 398 PHE CE2 CZ sing Y N 399 PHE CE2 HE2 sing N N 400 PHE CZ HZ sing N N 401 PHE OXT HXT sing N N 402 PRO N CA sing N N 403 PRO N CD sing N N 404 PRO N H sing N N 405 PRO CA C sing N N 406 PRO CA CB sing N N 407 PRO CA HA sing N N 408 PRO C O doub N N 409 PRO C OXT sing N N 410 PRO CB CG sing N N 411 PRO CB HB2 sing N N 412 PRO CB HB3 sing N N 413 PRO CG CD sing N N 414 PRO CG HG2 sing N N 415 PRO CG HG3 sing N N 416 PRO CD HD2 sing N N 417 PRO CD HD3 sing N N 418 PRO OXT HXT sing N N 419 SER N CA sing N N 420 SER N H sing N N 421 SER N H2 sing N N 422 SER CA C sing N N 423 SER CA CB sing N N 424 SER CA HA sing N N 425 SER C O doub N N 426 SER C OXT sing N N 427 SER CB OG sing N N 428 SER CB HB2 sing N N 429 SER CB HB3 sing N N 430 SER OG HG sing N N 431 SER OXT HXT sing N N 432 THR N CA sing N N 433 THR N H sing N N 434 THR N H2 sing N N 435 THR CA C sing N N 436 THR CA CB sing N N 437 THR CA HA sing N N 438 THR C O doub N N 439 THR C OXT sing N N 440 THR CB OG1 sing N N 441 THR CB CG2 sing N N 442 THR CB HB sing N N 443 THR OG1 HG1 sing N N 444 THR CG2 HG21 sing N N 445 THR CG2 HG22 sing N N 446 THR CG2 HG23 sing N N 447 THR OXT HXT sing N N 448 TRP N CA sing N N 449 TRP N H sing N N 450 TRP N H2 sing N N 451 TRP CA C sing N N 452 TRP CA CB sing N N 453 TRP CA HA sing N N 454 TRP C O doub N N 455 TRP C OXT sing N N 456 TRP CB CG sing N N 457 TRP CB HB2 sing N N 458 TRP CB HB3 sing N N 459 TRP CG CD1 doub Y N 460 TRP CG CD2 sing Y N 461 TRP CD1 NE1 sing Y N 462 TRP CD1 HD1 sing N N 463 TRP CD2 CE2 doub Y N 464 TRP CD2 CE3 sing Y N 465 TRP NE1 CE2 sing Y N 466 TRP NE1 HE1 sing N N 467 TRP CE2 CZ2 sing Y N 468 TRP CE3 CZ3 doub Y N 469 TRP CE3 HE3 sing N N 470 TRP CZ2 CH2 doub Y N 471 TRP CZ2 HZ2 sing N N 472 TRP CZ3 CH2 sing Y N 473 TRP CZ3 HZ3 sing N N 474 TRP CH2 HH2 sing N N 475 TRP OXT HXT sing N N 476 TYR N CA sing N N 477 TYR N H sing N N 478 TYR N H2 sing N N 479 TYR CA C sing N N 480 TYR CA CB sing N N 481 TYR CA HA sing N N 482 TYR C O doub N N 483 TYR C OXT sing N N 484 TYR CB CG sing N N 485 TYR CB HB2 sing N N 486 TYR CB HB3 sing N N 487 TYR CG CD1 doub Y N 488 TYR CG CD2 sing Y N 489 TYR CD1 CE1 sing Y N 490 TYR CD1 HD1 sing N N 491 TYR CD2 CE2 doub Y N 492 TYR CD2 HD2 sing N N 493 TYR CE1 CZ doub Y N 494 TYR CE1 HE1 sing N N 495 TYR CE2 CZ sing Y N 496 TYR CE2 HE2 sing N N 497 TYR CZ OH sing N N 498 TYR OH HH sing N N 499 TYR OXT HXT sing N N 500 VAL N CA sing N N 501 VAL N H sing N N 502 VAL N H2 sing N N 503 VAL CA C sing N N 504 VAL CA CB sing N N 505 VAL CA HA sing N N 506 VAL C O doub N N 507 VAL C OXT sing N N 508 VAL CB CG1 sing N N 509 VAL CB CG2 sing N N 510 VAL CB HB sing N N 511 VAL CG1 HG11 sing N N 512 VAL CG1 HG12 sing N N 513 VAL CG1 HG13 sing N N 514 VAL CG2 HG21 sing N N 515 VAL CG2 HG22 sing N N 516 VAL CG2 HG23 sing N N 517 VAL OXT HXT sing N N 518 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2AOC _pdbx_initial_refinement_model.details 'PDB Entry 2AOC' # _atom_sites.entry_id 2AOD _atom_sites.fract_transf_matrix[1][1] 0.017243 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011658 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021491 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S X # loop_