HEADER HYDROLASE INHIBITOR/PEPTIDE 21-AUG-05 2ARQ TITLE HUMAN PLASMINOGEN ACTIVATOR INHIBITOR-2.[LOOP (66-98) DELETION MUTANT] TITLE 2 COMPLEXED WITH PEPTIDE N-ACETYL-TEAAAGDGGVMTGR-OH COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLASMINOGEN ACTIVATOR INHIBITOR-2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PAI-2, PLACENTAL PLASMINOGEN ACTIVATOR INHIBITOR, MONOCYTE COMPND 5 ARG-SERPIN, UROKINASE INHIBITOR; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 14-MER FROM PLASMINOGEN ACTIVATOR INHIBITOR-2; COMPND 9 CHAIN: P; COMPND 10 SYNONYM: PAI-2, PLACENTAL PLASMINOGEN ACTIVATOR INHIBITOR, MONOCYTE COMPND 11 ARG-SERPIN, UROKINASE INHIBITOR; COMPND 12 ENGINEERED: YES; COMPND 13 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SERPIN, PEPTIDE BINDING, INHIBITOR, HYDROLASE INHIBITOR-PEPTIDE KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.A.DI GIUSTO,A.P.SUTHERLAND,L.JANKOVA,S.J.HARROP,P.M.CURMI,G.C.KING REVDAT 5 25-OCT-23 2ARQ 1 REMARK REVDAT 4 10-NOV-21 2ARQ 1 REMARK SEQADV LINK REVDAT 3 13-JUL-11 2ARQ 1 VERSN REVDAT 2 24-FEB-09 2ARQ 1 VERSN REVDAT 1 11-JUL-06 2ARQ 0 JRNL AUTH D.A.DI GIUSTO,A.P.SUTHERLAND,L.JANKOVA,S.J.HARROP,P.M.CURMI, JRNL AUTH 2 G.C.KING JRNL TITL PLASMINOGEN ACTIVATOR INHIBITOR-2 IS HIGHLY TOLERANT TO P8 JRNL TITL 2 RESIDUE SUBSTITUTION--IMPLICATIONS FOR SERPIN MECHANISTIC JRNL TITL 3 MODEL AND PREDICTION OF NSSNP ACTIVITIES JRNL REF J.MOL.BIOL. V. 353 1069 2005 JRNL REFN ISSN 0022-2836 JRNL PMID 16214170 JRNL DOI 10.1016/J.JMB.2005.09.008 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 32455 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1061 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2371 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.48 REMARK 3 BIN R VALUE (WORKING SET) : 0.2580 REMARK 3 BIN FREE R VALUE SET COUNT : 72 REMARK 3 BIN FREE R VALUE : 0.3740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2969 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 345 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.33000 REMARK 3 B22 (A**2) : -1.28000 REMARK 3 B33 (A**2) : 1.62000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.145 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.151 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.107 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.491 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3056 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2744 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4121 ; 1.708 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6411 ; 0.875 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 378 ; 6.328 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 141 ;35.475 ;24.397 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 550 ;13.019 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;22.532 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 448 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3378 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 626 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 583 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2692 ; 0.192 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1420 ; 0.179 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1773 ; 0.088 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 250 ; 0.181 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 8 ; 0.137 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 52 ; 0.305 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 19 ; 0.141 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2414 ; 1.524 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 766 ; 0.323 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3015 ; 1.844 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1383 ; 2.888 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1102 ; 3.999 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2ARQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-AUG-05. REMARK 100 THE DEPOSITION ID IS D_1000034234. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-OCT-99 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : ENRAF-NONIUS FR571 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAC SCIENCE DIP-2030 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33539 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 14.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : 0.06900 REMARK 200 FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.41700 REMARK 200 R SYM FOR SHELL (I) : 0.41700 REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1JRR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8K, PH 7.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 46.28100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.06300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 46.28100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.06300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 VAL A 96 REMARK 465 GLY A 97 REMARK 465 ALA A 98 REMARK 465 ALA A 99 REMARK 465 ALA A 100 REMARK 465 ASN A 217 REMARK 465 GLY A 218 REMARK 465 GLU A 271 REMARK 465 ILE A 272 REMARK 465 THR A 367 REMARK 465 GLU A 368 REMARK 465 ALA A 369 REMARK 465 ALA A 370 REMARK 465 ALA A 371 REMARK 465 GLY A 372 REMARK 465 THR A 373 REMARK 465 GLY A 374 REMARK 465 GLY A 375 REMARK 465 VAL A 376 REMARK 465 MET A 377 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 101 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 290 O HOH A 750 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 391 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 25 -30.71 -132.78 REMARK 500 GLU A 152 63.85 37.27 REMARK 500 ASP A 157 76.13 -109.04 REMARK 500 LYS A 215 93.31 -66.96 REMARK 500 ASP A 261 44.87 -95.44 REMARK 500 SER A 276 -120.65 -104.48 REMARK 500 LYS A 297 -155.04 -90.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACE P 344 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN P OF 14-MER FROM REMARK 800 PLASMINOGEN ACTIVATOR INHIBITOR-2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1JRR RELATED DB: PDB REMARK 900 HUMAN PLASMINOGEN ACTIVATOR INHIBITOR-2.[LOOP (66-98) DELETION REMARK 900 MUTANT] COMPLEXED WITH PEPTIDE MIMICKING THE REACTIVE CENTER LOOP REMARK 900 RELATED ID: 2ARR RELATED DB: PDB REMARK 900 THE SAME PROTEIN, MUTATION T8M AT 1.55 A DBREF 2ARQ A 1 415 UNP P05120 PAI2_HUMAN 1 415 DBREF 2ARQ P 345 358 UNP P05120 PAI2_HUMAN 366 380 SEQADV 2ARQ SER A 56 UNP P05120 LYS 56 CONFLICT SEQADV 2ARQ A UNP P05120 ASN 66 DELETION SEQADV 2ARQ A UNP P05120 ALA 67 DELETION SEQADV 2ARQ A UNP P05120 VAL 68 DELETION SEQADV 2ARQ A UNP P05120 THR 69 DELETION SEQADV 2ARQ A UNP P05120 PRO 70 DELETION SEQADV 2ARQ A UNP P05120 MET 71 DELETION SEQADV 2ARQ A UNP P05120 THR 72 DELETION SEQADV 2ARQ A UNP P05120 PRO 73 DELETION SEQADV 2ARQ A UNP P05120 GLU 74 DELETION SEQADV 2ARQ A UNP P05120 ASN 75 DELETION SEQADV 2ARQ A UNP P05120 PHE 76 DELETION SEQADV 2ARQ A UNP P05120 THR 77 DELETION SEQADV 2ARQ A UNP P05120 SER 78 DELETION SEQADV 2ARQ A UNP P05120 CYS 79 DELETION SEQADV 2ARQ A UNP P05120 GLY 80 DELETION SEQADV 2ARQ A UNP P05120 PHE 81 DELETION SEQADV 2ARQ A UNP P05120 MET 82 DELETION SEQADV 2ARQ A UNP P05120 GLN 83 DELETION SEQADV 2ARQ A UNP P05120 GLN 84 DELETION SEQADV 2ARQ A UNP P05120 ILE 85 DELETION SEQADV 2ARQ A UNP P05120 GLN 86 DELETION SEQADV 2ARQ A UNP P05120 LYS 87 DELETION SEQADV 2ARQ A UNP P05120 GLY 88 DELETION SEQADV 2ARQ A UNP P05120 SER 89 DELETION SEQADV 2ARQ A UNP P05120 TYR 90 DELETION SEQADV 2ARQ A UNP P05120 PRO 91 DELETION SEQADV 2ARQ A UNP P05120 ASP 92 DELETION SEQADV 2ARQ A UNP P05120 ALA 93 DELETION SEQADV 2ARQ A UNP P05120 ILE 94 DELETION SEQADV 2ARQ A UNP P05120 LEU 95 DELETION SEQADV 2ARQ A UNP P05120 GLN 96 DELETION SEQADV 2ARQ A UNP P05120 ALA 97 DELETION SEQADV 2ARQ A UNP P05120 GLN 98 DELETION SEQADV 2ARQ PHE A 220 UNP P05120 TYR 220 CONFLICT SEQADV 2ARQ ASP P 351 UNP P05120 THR 373 ENGINEERED MUTATION SEQRES 1 A 382 MET GLU ASP LEU CYS VAL ALA ASN THR LEU PHE ALA LEU SEQRES 2 A 382 ASN LEU PHE LYS HIS LEU ALA LYS ALA SER PRO THR GLN SEQRES 3 A 382 ASN LEU PHE LEU SER PRO TRP SER ILE SER SER THR MET SEQRES 4 A 382 ALA MET VAL TYR MET GLY SER ARG GLY SER THR GLU ASP SEQRES 5 A 382 GLN MET ALA SER VAL LEU GLN PHE ASN GLU VAL GLY ALA SEQRES 6 A 382 ALA ALA ASP LYS ILE HIS SER SER PHE ARG SER LEU SER SEQRES 7 A 382 SER ALA ILE ASN ALA SER THR GLY ASN TYR LEU LEU GLU SEQRES 8 A 382 SER VAL ASN LYS LEU PHE GLY GLU LYS SER ALA SER PHE SEQRES 9 A 382 ARG GLU GLU TYR ILE ARG LEU CYS GLN LYS TYR TYR SER SEQRES 10 A 382 SER GLU PRO GLN ALA VAL ASP PHE LEU GLU CYS ALA GLU SEQRES 11 A 382 GLU ALA ARG LYS LYS ILE ASN SER TRP VAL LYS THR GLN SEQRES 12 A 382 THR LYS GLY LYS ILE PRO ASN LEU LEU PRO GLU GLY SER SEQRES 13 A 382 VAL ASP GLY ASP THR ARG MET VAL LEU VAL ASN ALA VAL SEQRES 14 A 382 TYR PHE LYS GLY LYS TRP LYS THR PRO PHE GLU LYS LYS SEQRES 15 A 382 LEU ASN GLY LEU PHE PRO PHE ARG VAL ASN SER ALA GLN SEQRES 16 A 382 ARG THR PRO VAL GLN MET MET TYR LEU ARG GLU LYS LEU SEQRES 17 A 382 ASN ILE GLY TYR ILE GLU ASP LEU LYS ALA GLN ILE LEU SEQRES 18 A 382 GLU LEU PRO TYR ALA GLY ASP VAL SER MET PHE LEU LEU SEQRES 19 A 382 LEU PRO ASP GLU ILE ALA ASP VAL SER THR GLY LEU GLU SEQRES 20 A 382 LEU LEU GLU SER GLU ILE THR TYR ASP LYS LEU ASN LYS SEQRES 21 A 382 TRP THR SER LYS ASP LYS MET ALA GLU ASP GLU VAL GLU SEQRES 22 A 382 VAL TYR ILE PRO GLN PHE LYS LEU GLU GLU HIS TYR GLU SEQRES 23 A 382 LEU ARG SER ILE LEU ARG SER MET GLY MET GLU ASP ALA SEQRES 24 A 382 PHE ASN LYS GLY ARG ALA ASN PHE SER GLY MET SER GLU SEQRES 25 A 382 ARG ASN ASP LEU PHE LEU SER GLU VAL PHE HIS GLN ALA SEQRES 26 A 382 MET VAL ASP VAL ASN GLU GLU GLY THR GLU ALA ALA ALA SEQRES 27 A 382 GLY THR GLY GLY VAL MET THR GLY ARG THR GLY HIS GLY SEQRES 28 A 382 GLY PRO GLN PHE VAL ALA ASP HIS PRO PHE LEU PHE LEU SEQRES 29 A 382 ILE MET HIS LYS ILE THR ASN CYS ILE LEU PHE PHE GLY SEQRES 30 A 382 ARG PHE SER SER PRO SEQRES 1 P 15 ACE THR GLU ALA ALA ALA GLY ASP GLY GLY VAL MET THR SEQRES 2 P 15 GLY ARG HET ACE P 344 3 HETNAM ACE ACETYL GROUP FORMUL 2 ACE C2 H4 O FORMUL 3 HOH *345(H2 O) HELIX 1 1 CYS A 5 SER A 23 1 19 HELIX 2 2 SER A 31 SER A 46 1 16 HELIX 3 3 ARG A 47 LEU A 58 1 12 HELIX 4 4 LYS A 102 ALA A 116 1 15 HELIX 5 5 ARG A 138 SER A 150 1 13 HELIX 6 6 ASP A 157 THR A 177 1 21 HELIX 7 7 GLU A 247 LEU A 249 5 3 HELIX 8 8 LEU A 279 ILE A 286 1 8 HELIX 9 9 THR A 287 SER A 296 1 10 HELIX 10 10 LEU A 320 GLY A 328 1 9 HELIX 11 11 GLU A 330 ASN A 334 5 5 SHEET 1 A 7 LEU A 28 LEU A 30 0 SHEET 2 A 7 CYS A 405 PHE A 412 -1 O ARG A 411 N LEU A 28 SHEET 3 A 7 PHE A 394 HIS A 400 -1 N HIS A 400 O CYS A 405 SHEET 4 A 7 VAL A 262 PRO A 269 -1 N SER A 263 O MET A 399 SHEET 5 A 7 ALA A 251 PRO A 257 -1 N LEU A 256 O MET A 264 SHEET 6 A 7 MET A 234 ILE A 246 -1 N ILE A 246 O ALA A 251 SHEET 7 A 7 GLU A 213 LYS A 214 -1 N GLU A 213 O TYR A 236 SHEET 1 B 8 LEU A 28 LEU A 30 0 SHEET 2 B 8 CYS A 405 PHE A 412 -1 O ARG A 411 N LEU A 28 SHEET 3 B 8 PHE A 394 HIS A 400 -1 N HIS A 400 O CYS A 405 SHEET 4 B 8 VAL A 262 PRO A 269 -1 N SER A 263 O MET A 399 SHEET 5 B 8 ALA A 251 PRO A 257 -1 N LEU A 256 O MET A 264 SHEET 6 B 8 MET A 234 ILE A 246 -1 N ILE A 246 O ALA A 251 SHEET 7 B 8 ALA A 301 PRO A 310 -1 O VAL A 305 N GLU A 239 SHEET 8 B 8 GLN A 387 VAL A 389 1 O PHE A 388 N TYR A 308 SHEET 1 C 6 GLN A 154 VAL A 156 0 SHEET 2 C 6 LEU A 122 GLU A 132 1 N GLY A 131 O GLN A 154 SHEET 3 C 6 THR A 194 GLY A 206 -1 O VAL A 199 N LYS A 128 SHEET 4 C 6 THR P 345 GLY P 357 -1 O MET P 355 N MET A 196 SHEET 5 C 6 LEU A 349 VAL A 362 -1 N SER A 352 O VAL P 354 SHEET 6 C 6 PHE A 312 GLU A 319 -1 N PHE A 312 O VAL A 362 SHEET 1 D 2 PHE A 220 ASN A 225 0 SHEET 2 D 2 GLN A 228 VAL A 232 -1 O VAL A 232 N PHE A 220 SSBOND 1 CYS A 5 CYS A 405 1555 1555 1.95 LINK C ACE P 344 N THR P 345 1555 1555 1.33 SITE 1 AC1 6 GLY A 206 TRP A 208 VAL A 362 ASN A 363 SITE 2 AC1 6 GLU A 365 THR P 345 SITE 1 AC2 49 SER A 31 SER A 34 ILE A 35 THR A 38 SITE 2 AC2 49 LYS A 180 ILE A 181 LEU A 184 SER A 189 SITE 3 AC2 49 ASP A 193 THR A 194 ARG A 195 MET A 196 SITE 4 AC2 49 VAL A 197 LEU A 198 VAL A 199 ASN A 200 SITE 5 AC2 49 ALA A 201 VAL A 202 TYR A 203 PHE A 204 SITE 6 AC2 49 LYS A 205 GLY A 206 TRP A 208 TYR A 258 SITE 7 AC2 49 LYS A 335 ALA A 338 PHE A 340 ASN A 347 SITE 8 AC2 49 ASP A 348 LEU A 349 PHE A 350 LEU A 351 SITE 9 AC2 49 SER A 352 GLU A 353 VAL A 354 PHE A 355 SITE 10 AC2 49 HIS A 356 GLN A 357 ALA A 358 MET A 359 SITE 11 AC2 49 VAL A 360 ASP A 361 HOH A 439 HOH A 546 SITE 12 AC2 49 HOH P 136 HOH P 188 HOH P 246 HOH P 275 SITE 13 AC2 49 ACE P 344 CRYST1 92.562 104.126 41.438 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010804 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009604 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024132 0.00000