HEADER SIGNALING PROTEIN 26-AUG-05 2ATV TITLE THE CRYSTAL STRUCTURE OF HUMAN RERG IN THE GDP BOUND STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS-LIKE ESTROGEN-REGULATED GROWTH INHIBITOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RERG; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RERG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL-21(DE3)R3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS RERG, GDP/GTP BINDING, GTP HYDROLYSIS, STRUCTURAL GENOMICS, KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM, SGC, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.P.TURNBULL,E.SALAH,G.SCHOCH,J.ELKINS,N.BURGESS,O.GILEADI,F.VON AUTHOR 2 DELFT,J.WEIGELT,A.EDWARDS,C.ARROWSMITH,M.SUNDSTROM,D.DOYLE, AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 5 23-AUG-23 2ATV 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 2ATV 1 VERSN REVDAT 3 05-MAY-10 2ATV 1 AUTHOR JRNL REVDAT 2 24-FEB-09 2ATV 1 VERSN REVDAT 1 18-OCT-05 2ATV 0 JRNL AUTH A.P.TURNBULL,E.SALAH,G.SCHOCH,J.ELKINS,N.BURGESS,O.GILEADI, JRNL AUTH 2 F.VON DELFT,J.WEIGELT,A.EDWARDS,C.ARROWSMITH,M.SUNDSTROM, JRNL AUTH 3 D.DOYLE JRNL TITL THE CRYSTAL STRUCTURE OF HUMAN RERG IN THE GDP BOUND STATE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.07 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 24500 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1326 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1775 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2700 REMARK 3 BIN FREE R VALUE SET COUNT : 98 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1308 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 93 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.82000 REMARK 3 B22 (A**2) : 0.82000 REMARK 3 B33 (A**2) : -1.64000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.109 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.109 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.074 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.538 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1370 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1261 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1859 ; 1.380 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2907 ; 0.782 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 171 ; 5.428 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 60 ;41.332 ;23.167 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 238 ;13.929 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;16.169 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 212 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1511 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 291 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 239 ; 0.206 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1244 ; 0.181 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 680 ; 0.176 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 849 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 77 ; 0.151 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 8 ; 0.151 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 42 ; 0.253 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.160 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 894 ; 3.476 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 349 ; 0.853 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1345 ; 4.357 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 595 ; 6.617 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 512 ; 9.147 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 10 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 15 REMARK 3 RESIDUE RANGE : A 16 A 29 REMARK 3 RESIDUE RANGE : A 30 A 38 REMARK 3 RESIDUE RANGE : A 39 A 57 REMARK 3 RESIDUE RANGE : A 58 A 72 REMARK 3 RESIDUE RANGE : A 73 A 88 REMARK 3 RESIDUE RANGE : A 89 A 99 REMARK 3 RESIDUE RANGE : A 100 A 121 REMARK 3 RESIDUE RANGE : A 122 A 159 REMARK 3 RESIDUE RANGE : A 160 A 172 REMARK 3 ORIGIN FOR THE GROUP (A): 12.6510 31.6820 8.0930 REMARK 3 T TENSOR REMARK 3 T11: -0.0876 T22: -0.1150 REMARK 3 T33: -0.1020 T12: 0.0228 REMARK 3 T13: -0.0129 T23: -0.0223 REMARK 3 L TENSOR REMARK 3 L11: 1.7472 L22: 1.8530 REMARK 3 L33: 2.0526 L12: 0.0280 REMARK 3 L13: 0.0315 L23: 0.8827 REMARK 3 S TENSOR REMARK 3 S11: -0.0067 S12: -0.1433 S13: 0.1389 REMARK 3 S21: -0.0968 S22: -0.0101 S23: 0.0702 REMARK 3 S31: 0.0171 S32: 0.0944 S33: 0.0168 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2ATV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-AUG-05. REMARK 100 THE DEPOSITION ID IS D_1000034304. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-AUG-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25918 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1GUA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, AMMONIUM ACETATE, BIS TRIS REMARK 280 BUFFER , PH 4.9, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.93800 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.20250 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.20250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 26.96900 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.20250 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.20250 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 80.90700 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.20250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.20250 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 26.96900 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.20250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.20250 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 80.90700 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 53.93800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 438 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 486 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 3 REMARK 465 SER A 4 REMARK 465 VAL A 173 REMARK 465 GLN A 174 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 8 CE NZ REMARK 470 ARG A 44 NE CZ NH1 NH2 REMARK 470 ASP A 51 CG OD1 OD2 REMARK 470 GLU A 52 CD OE1 OE2 REMARK 470 ASP A 66 CB CG OD1 OD2 REMARK 470 GLN A 69 CD OE1 NE2 REMARK 470 GLU A 71 CG CD OE1 OE2 REMARK 470 GLU A 104 CD OE1 OE2 REMARK 470 LYS A 109 CD CE NZ REMARK 470 GLU A 131 CD OE1 OE2 REMARK 470 GLU A 153 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 25 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 25 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 50 -117.66 57.17 REMARK 500 ALA A 62 -77.61 -119.21 REMARK 500 LYS A 119 33.83 71.59 REMARK 500 LEU A 122 43.78 -96.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 175 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 20 OG REMARK 620 2 GDP A 415 O3B 93.6 REMARK 620 3 HOH A 416 O 91.7 174.5 REMARK 620 4 HOH A 417 O 90.9 91.5 86.8 REMARK 620 5 HOH A 500 O 83.1 93.9 88.4 172.2 REMARK 620 6 HOH A 501 O 173.5 88.3 86.6 95.2 90.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 175 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 415 DBREF 2ATV A 1 174 UNP Q96A58 RERG_HUMAN 1 174 SEQADV 2ATV MET A -21 UNP Q96A58 CLONING ARTIFACT SEQADV 2ATV HIS A -20 UNP Q96A58 EXPRESSION TAG SEQADV 2ATV HIS A -19 UNP Q96A58 EXPRESSION TAG SEQADV 2ATV HIS A -18 UNP Q96A58 EXPRESSION TAG SEQADV 2ATV HIS A -17 UNP Q96A58 EXPRESSION TAG SEQADV 2ATV HIS A -16 UNP Q96A58 EXPRESSION TAG SEQADV 2ATV HIS A -15 UNP Q96A58 EXPRESSION TAG SEQADV 2ATV SER A -14 UNP Q96A58 CLONING ARTIFACT SEQADV 2ATV SER A -13 UNP Q96A58 CLONING ARTIFACT SEQADV 2ATV GLY A -12 UNP Q96A58 CLONING ARTIFACT SEQADV 2ATV VAL A -11 UNP Q96A58 CLONING ARTIFACT SEQADV 2ATV ASP A -10 UNP Q96A58 CLONING ARTIFACT SEQADV 2ATV LEU A -9 UNP Q96A58 CLONING ARTIFACT SEQADV 2ATV GLY A -8 UNP Q96A58 CLONING ARTIFACT SEQADV 2ATV THR A -7 UNP Q96A58 CLONING ARTIFACT SEQADV 2ATV GLU A -6 UNP Q96A58 CLONING ARTIFACT SEQADV 2ATV ASN A -5 UNP Q96A58 CLONING ARTIFACT SEQADV 2ATV LEU A -4 UNP Q96A58 CLONING ARTIFACT SEQADV 2ATV TYR A -3 UNP Q96A58 CLONING ARTIFACT SEQADV 2ATV PHE A -2 UNP Q96A58 CLONING ARTIFACT SEQADV 2ATV GLN A -1 UNP Q96A58 CLONING ARTIFACT SEQADV 2ATV SER A 0 UNP Q96A58 CLONING ARTIFACT SEQRES 1 A 196 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 196 GLY THR GLU ASN LEU TYR PHE GLN SER MET ALA LYS SER SEQRES 3 A 196 ALA GLU VAL LYS LEU ALA ILE PHE GLY ARG ALA GLY VAL SEQRES 4 A 196 GLY LYS SER ALA LEU VAL VAL ARG PHE LEU THR LYS ARG SEQRES 5 A 196 PHE ILE TRP GLU TYR ASP PRO THR LEU GLU SER THR TYR SEQRES 6 A 196 ARG HIS GLN ALA THR ILE ASP ASP GLU VAL VAL SER MET SEQRES 7 A 196 GLU ILE LEU ASP THR ALA GLY GLN GLU ASP THR ILE GLN SEQRES 8 A 196 ARG GLU GLY HIS MET ARG TRP GLY GLU GLY PHE VAL LEU SEQRES 9 A 196 VAL TYR ASP ILE THR ASP ARG GLY SER PHE GLU GLU VAL SEQRES 10 A 196 LEU PRO LEU LYS ASN ILE LEU ASP GLU ILE LYS LYS PRO SEQRES 11 A 196 LYS ASN VAL THR LEU ILE LEU VAL GLY ASN LYS ALA ASP SEQRES 12 A 196 LEU ASP HIS SER ARG GLN VAL SER THR GLU GLU GLY GLU SEQRES 13 A 196 LYS LEU ALA THR GLU LEU ALA CYS ALA PHE TYR GLU CYS SEQRES 14 A 196 SER ALA CYS THR GLY GLU GLY ASN ILE THR GLU ILE PHE SEQRES 15 A 196 TYR GLU LEU CYS ARG GLU VAL ARG ARG ARG ARG MET VAL SEQRES 16 A 196 GLN HET MG A 175 1 HET GDP A 415 28 HETNAM MG MAGNESIUM ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE FORMUL 2 MG MG 2+ FORMUL 3 GDP C10 H15 N5 O11 P2 FORMUL 4 HOH *93(H2 O) HELIX 1 1 GLY A 18 LYS A 29 1 12 HELIX 2 2 THR A 67 GLY A 77 1 11 HELIX 3 3 ASP A 88 GLU A 94 1 7 HELIX 4 4 GLU A 94 LYS A 107 1 14 HELIX 5 5 LYS A 119 ARG A 126 5 8 HELIX 6 6 SER A 129 ALA A 141 1 13 HELIX 7 7 ASN A 155 MET A 172 1 18 SHEET 1 A 6 SER A 41 ILE A 49 0 SHEET 2 A 6 GLU A 52 ASP A 60 -1 O VAL A 54 N ALA A 47 SHEET 3 A 6 VAL A 7 PHE A 12 1 N LEU A 9 O LEU A 59 SHEET 4 A 6 GLY A 79 ASP A 85 1 O VAL A 81 N PHE A 12 SHEET 5 A 6 LEU A 113 ASN A 118 1 O ASN A 118 N TYR A 84 SHEET 6 A 6 ALA A 143 GLU A 146 1 O TYR A 145 N GLY A 117 LINK OG SER A 20 MG MG A 175 1555 1555 2.10 LINK MG MG A 175 O3B GDP A 415 1555 1555 2.04 LINK MG MG A 175 O HOH A 416 1555 1555 2.14 LINK MG MG A 175 O HOH A 417 1555 1555 2.10 LINK MG MG A 175 O HOH A 500 1555 1555 2.02 LINK MG MG A 175 O HOH A 501 1555 1555 2.13 CISPEP 1 LYS A 107 PRO A 108 0 3.93 SITE 1 AC1 6 SER A 20 GDP A 415 HOH A 416 HOH A 417 SITE 2 AC1 6 HOH A 500 HOH A 501 SITE 1 AC2 23 GLY A 16 VAL A 17 GLY A 18 LYS A 19 SITE 2 AC2 23 SER A 20 ALA A 21 PHE A 31 GLU A 34 SITE 3 AC2 23 ASN A 118 LYS A 119 ASP A 121 LEU A 122 SITE 4 AC2 23 SER A 148 ALA A 149 CYS A 150 MG A 175 SITE 5 AC2 23 HOH A 417 HOH A 447 HOH A 464 HOH A 496 SITE 6 AC2 23 HOH A 500 HOH A 501 HOH A 506 CRYST1 76.405 76.405 107.876 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013088 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013088 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009270 0.00000