HEADER TRANSFERASE/DNA 26-AUG-05 2AU0 TITLE UNMODIFIED PREINSERTION BINARY COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3'; COMPND 3 CHAIN: D, H; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: PRIMER STRAND (DIDEOXY-TERMINATED AT 3'-END); COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: 5'-D(*CP*TP*AP*AP*CP*G*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP* COMPND 8 C)-3'; COMPND 9 CHAIN: E, J; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: TEMPLATE STRAND; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DPO4 POLYMERASE IV; COMPND 14 CHAIN: A, B; COMPND 15 SYNONYM: POL IV; COMPND 16 EC: 2.7.7.7; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 SYNTHETIC: YES; SOURCE 5 MOL_ID: 3; SOURCE 6 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; SOURCE 7 ORGANISM_TAXID: 2287; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-RIL (STRATAGENE); SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PET-28A KEYWDS DNA POLYMERASE, Y-FAMILY, LESION BYPASS, BINARY COMPLEX, TRANSFERASE- KEYWDS 2 DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR O.RECHKOBLIT,L.MALININA,Y.CHENG,V.KURYAVYI,S.BROYDE,N.E.GEACINTOV, AUTHOR 2 D.J.PATEL REVDAT 5 23-AUG-23 2AU0 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 2AU0 1 VERSN REVDAT 3 24-FEB-09 2AU0 1 VERSN REVDAT 2 17-JAN-06 2AU0 1 JRNL REVDAT 1 10-JAN-06 2AU0 0 JRNL AUTH O.RECHKOBLIT,L.MALININA,Y.CHENG,V.KURYAVYI,S.BROYDE, JRNL AUTH 2 N.E.GEACINTOV,D.J.PATEL JRNL TITL STEPWISE TRANSLOCATION OF DPO4 POLYMERASE DURING ERROR-FREE JRNL TITL 2 BYPASS OF AN OXOG LESION JRNL REF PLOS BIOL. V. 4 1 2006 JRNL REFN ISSN 1544-9173 JRNL PMID 16379496 JRNL DOI 10.1371/JOURNAL.PBIO.0040011 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 23377 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.271 REMARK 3 R VALUE (WORKING SET) : 0.269 REMARK 3 FREE R VALUE : 0.310 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1194 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1708 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2820 REMARK 3 BIN FREE R VALUE SET COUNT : 71 REMARK 3 BIN FREE R VALUE : 0.3530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5478 REMARK 3 NUCLEIC ACID ATOMS : 1052 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 118 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.14000 REMARK 3 B22 (A**2) : -1.00000 REMARK 3 B33 (A**2) : 0.55000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.455 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.362 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 32.762 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.887 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.861 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6737 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 5884 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9276 ; 1.494 ; 2.189 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13784 ; 0.861 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 680 ; 7.780 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 242 ;40.205 ;23.636 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1120 ;20.918 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;16.937 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1056 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6540 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1098 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1919 ; 0.234 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 6887 ; 0.186 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3085 ; 0.199 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): 3981 ; 0.088 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 417 ; 0.305 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): 12 ; 0.149 ; 0.500 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.338 ; 0.500 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 54 ; 0.182 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 120 ; 0.180 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.316 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3557 ; 0.355 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1382 ; 0.059 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5518 ; 0.610 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3988 ; 0.748 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3758 ; 1.204 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 341 REMARK 3 ORIGIN FOR THE GROUP (A): 5.3120 0.7610 4.3970 REMARK 3 T TENSOR REMARK 3 T11: 0.0329 T22: 0.0465 REMARK 3 T33: -0.0114 T12: 0.0103 REMARK 3 T13: 0.0720 T23: 0.0158 REMARK 3 L TENSOR REMARK 3 L11: 1.3663 L22: 0.3433 REMARK 3 L33: 0.6847 L12: 0.3795 REMARK 3 L13: 0.8363 L23: 0.0429 REMARK 3 S TENSOR REMARK 3 S11: 0.0139 S12: -0.0051 S13: -0.0497 REMARK 3 S21: 0.0259 S22: 0.0190 S23: -0.0002 REMARK 3 S31: -0.1011 S32: -0.0325 S33: -0.0329 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1001 B 1341 REMARK 3 ORIGIN FOR THE GROUP (A): 2.7190 143.5150 27.7770 REMARK 3 T TENSOR REMARK 3 T11: 0.0164 T22: 0.0707 REMARK 3 T33: 0.0237 T12: 0.0341 REMARK 3 T13: 0.0630 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 0.1695 L22: 0.2609 REMARK 3 L33: 1.3625 L12: 0.1846 REMARK 3 L13: 0.3698 L23: 0.2213 REMARK 3 S TENSOR REMARK 3 S11: 0.0420 S12: -0.0095 S13: -0.1066 REMARK 3 S21: -0.0292 S22: 0.0003 S23: -0.0278 REMARK 3 S31: -0.0718 S32: 0.0127 S33: -0.0422 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 801 D 813 REMARK 3 RESIDUE RANGE : E 907 E 919 REMARK 3 RESIDUE RANGE : A 415 A 415 REMARK 3 ORIGIN FOR THE GROUP (A): 15.5220 10.4580 14.4160 REMARK 3 T TENSOR REMARK 3 T11: 0.1781 T22: 0.1115 REMARK 3 T33: 0.1318 T12: -0.0785 REMARK 3 T13: 0.0097 T23: 0.0293 REMARK 3 L TENSOR REMARK 3 L11: 3.6559 L22: 0.5368 REMARK 3 L33: 2.6298 L12: 0.9909 REMARK 3 L13: 2.6339 L23: 1.1571 REMARK 3 S TENSOR REMARK 3 S11: -0.0706 S12: -0.2147 S13: -0.2082 REMARK 3 S21: -0.1829 S22: 0.1691 S23: -0.2066 REMARK 3 S31: -0.6099 S32: -0.2867 S33: -0.0985 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : H 1801 H 1813 REMARK 3 RESIDUE RANGE : J 1907 J 1919 REMARK 3 RESIDUE RANGE : H 1415 H 1415 REMARK 3 RESIDUE RANGE : J 1416 J 1416 REMARK 3 ORIGIN FOR THE GROUP (A): -4.1790 133.7100 15.1280 REMARK 3 T TENSOR REMARK 3 T11: 0.1402 T22: 0.1249 REMARK 3 T33: 0.1435 T12: 0.0713 REMARK 3 T13: 0.0547 T23: -0.0844 REMARK 3 L TENSOR REMARK 3 L11: 0.6711 L22: 1.4508 REMARK 3 L33: 4.5809 L12: -0.3147 REMARK 3 L13: 1.7312 L23: -0.4243 REMARK 3 S TENSOR REMARK 3 S11: 0.4040 S12: -0.3675 S13: -0.4433 REMARK 3 S21: 0.1977 S22: 0.1606 S23: -0.1817 REMARK 3 S31: 0.3954 S32: -0.1536 S33: -0.5647 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2AU0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-SEP-05. REMARK 100 THE DEPOSITION ID IS D_1000034309. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAR-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54180 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27449 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.63500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: OXOG-MODIFIED PREINSERTION BINARY COMPLEX; PDB ID REMARK 200 CODE 2ASJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, HEPES-SODIUM, CALCIUM REMARK 280 ACETATE, PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 90.48100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, J, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DC E 901 REMARK 465 DT E 902 REMARK 465 DA E 903 REMARK 465 DA E 904 REMARK 465 DC E 905 REMARK 465 DG E 906 REMARK 465 DC J 1901 REMARK 465 DT J 1902 REMARK 465 DA J 1903 REMARK 465 DA J 1904 REMARK 465 DC J 1905 REMARK 465 DG J 1906 REMARK 465 GLY A -7 REMARK 465 SER A -6 REMARK 465 HIS A -5 REMARK 465 MET A -4 REMARK 465 GLY A -3 REMARK 465 GLY A -2 REMARK 465 GLY A -1 REMARK 465 GLY A 0 REMARK 465 GLU A 342 REMARK 465 ALA A 343 REMARK 465 ILE A 344 REMARK 465 GLY A 345 REMARK 465 LEU A 346 REMARK 465 ASP A 347 REMARK 465 LYS A 348 REMARK 465 PHE A 349 REMARK 465 PHE A 350 REMARK 465 ASP A 351 REMARK 465 THR A 352 REMARK 465 GLY B -7 REMARK 465 SER B -6 REMARK 465 HIS B -5 REMARK 465 MET B -4 REMARK 465 GLY B -3 REMARK 465 GLY B -2 REMARK 465 GLY B -1 REMARK 465 GLY B 0 REMARK 465 GLU B 1342 REMARK 465 ALA B 1343 REMARK 465 ILE B 1344 REMARK 465 GLY B 1345 REMARK 465 LEU B 1346 REMARK 465 ASP B 1347 REMARK 465 LYS B 1348 REMARK 465 PHE B 1349 REMARK 465 PHE B 1350 REMARK 465 ASP B 1351 REMARK 465 THR B 1352 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DC E 907 P OP1 OP2 REMARK 470 DC J1907 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH H 1507 O HOH H 1510 1.88 REMARK 500 OG1 THR A 141 O LYS A 159 1.99 REMARK 500 O HOH B 2 O HOH B 85 2.03 REMARK 500 O HOH D 28 O HOH D 66 2.03 REMARK 500 NZ LYS A 262 O HOH A 522 2.07 REMARK 500 O GLU B 1079 O HOH B 93 2.08 REMARK 500 O HOH A 518 O HOH A 536 2.12 REMARK 500 OE1 GLU B 1017 NZ LYS B 1024 2.13 REMARK 500 O HOH A 524 O HOH A 527 2.13 REMARK 500 O MET B 1216 O HOH B 3 2.14 REMARK 500 NZ LYS B 1129 OD1 ASN B 1161 2.15 REMARK 500 N2 DG H 1802 N3 DC J 1918 2.17 REMARK 500 O GLY B 1198 ND2 ASN B 1200 2.17 REMARK 500 OE2 GLU B 1016 OH TYR B 1081 2.17 REMARK 500 OD2 ASP A 326 N ARG A 328 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC J1910 O3' DC J1910 C3' -0.067 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT D 803 C3' - C2' - C1' ANGL. DEV. = -5.0 DEGREES REMARK 500 DT D 803 O4' - C1' - N1 ANGL. DEV. = 6.1 DEGREES REMARK 500 DG D 805 O4' - C1' - N9 ANGL. DEV. = 4.0 DEGREES REMARK 500 DG D 806 O4' - C1' - N9 ANGL. DEV. = 6.8 DEGREES REMARK 500 DT D 808 O4' - C1' - N1 ANGL. DEV. = 3.9 DEGREES REMARK 500 DT D 811 C6 - C5 - C7 ANGL. DEV. = -5.3 DEGREES REMARK 500 DA D 812 O4' - C4' - C3' ANGL. DEV. = -3.9 DEGREES REMARK 500 DC E 907 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DT E 908 O4' - C1' - C2' ANGL. DEV. = -4.8 DEGREES REMARK 500 DT E 908 O4' - C1' - N1 ANGL. DEV. = 4.1 DEGREES REMARK 500 DC E 911 O4' - C1' - N1 ANGL. DEV. = 4.7 DEGREES REMARK 500 DA E 912 O4' - C1' - N9 ANGL. DEV. = 3.4 DEGREES REMARK 500 DT E 913 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 DA E 916 O4' - C1' - N9 ANGL. DEV. = 4.2 DEGREES REMARK 500 DA E 917 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DC E 918 O4' - C1' - C2' ANGL. DEV. = -5.8 DEGREES REMARK 500 DC E 918 O4' - C1' - N1 ANGL. DEV. = 10.7 DEGREES REMARK 500 DT H1803 O5' - C5' - C4' ANGL. DEV. = -5.0 DEGREES REMARK 500 DT H1803 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DT H1804 O4' - C1' - C2' ANGL. DEV. = -5.0 DEGREES REMARK 500 DT H1804 O4' - C1' - N1 ANGL. DEV. = 3.9 DEGREES REMARK 500 DG H1805 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 DG H1806 C3' - C2' - C1' ANGL. DEV. = -5.5 DEGREES REMARK 500 DG H1806 O4' - C1' - N9 ANGL. DEV. = 4.1 DEGREES REMARK 500 DT H1808 C3' - C2' - C1' ANGL. DEV. = -6.1 DEGREES REMARK 500 DT H1808 O4' - C1' - C2' ANGL. DEV. = -5.2 DEGREES REMARK 500 DT H1808 O4' - C1' - N1 ANGL. DEV. = 4.7 DEGREES REMARK 500 DG H1809 O4' - C1' - N9 ANGL. DEV. = 3.1 DEGREES REMARK 500 DG H1810 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DT H1811 O4' - C4' - C3' ANGL. DEV. = -3.3 DEGREES REMARK 500 DT H1811 C3' - C2' - C1' ANGL. DEV. = -5.5 DEGREES REMARK 500 DA H1812 C4' - C3' - C2' ANGL. DEV. = -4.4 DEGREES REMARK 500 DA H1812 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DC J1911 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DA J1912 O4' - C1' - N9 ANGL. DEV. = 7.7 DEGREES REMARK 500 DC J1914 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DC J1915 O4' - C1' - N1 ANGL. DEV. = 7.6 DEGREES REMARK 500 DC J1915 C3' - O3' - P ANGL. DEV. = 7.8 DEGREES REMARK 500 DA J1916 C1' - O4' - C4' ANGL. DEV. = -7.0 DEGREES REMARK 500 DA J1916 O4' - C1' - N9 ANGL. DEV. = 9.2 DEGREES REMARK 500 DC J1918 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 10 49.34 30.87 REMARK 500 ASN A 20 79.57 -113.85 REMARK 500 PRO A 21 12.69 -69.10 REMARK 500 SER A 34 -72.97 59.93 REMARK 500 ARG A 36 -160.17 -75.26 REMARK 500 GLU A 38 79.14 34.18 REMARK 500 ASP A 39 174.63 64.28 REMARK 500 SER A 40 147.37 140.88 REMARK 500 ARG A 51 13.10 -68.57 REMARK 500 PRO A 60 127.28 -36.75 REMARK 500 ALA A 71 166.20 -45.65 REMARK 500 PRO A 75 -162.38 -65.18 REMARK 500 GLU A 94 -46.24 -29.08 REMARK 500 SER A 96 126.81 -179.45 REMARK 500 GLU A 97 53.53 -102.73 REMARK 500 LYS A 98 47.06 -147.14 REMARK 500 ALA A 102 -114.74 -116.48 REMARK 500 ASP A 105 51.74 -109.30 REMARK 500 GLU A 106 149.53 -176.51 REMARK 500 ASP A 110 76.09 -102.20 REMARK 500 SER A 112 2.55 -54.74 REMARK 500 LYS A 114 45.26 -104.27 REMARK 500 SER A 145 -139.52 -164.44 REMARK 500 MET A 157 -83.01 -67.31 REMARK 500 ASN A 161 74.07 38.11 REMARK 500 ASP A 167 -164.90 -59.10 REMARK 500 ASP A 182 21.91 -79.74 REMARK 500 LEU A 197 32.97 -81.44 REMARK 500 ASN A 200 -80.57 -113.09 REMARK 500 THR A 205 2.16 -69.78 REMARK 500 SER A 207 50.87 -98.35 REMARK 500 LEU A 213 -56.84 -171.72 REMARK 500 MET A 216 -55.26 179.38 REMARK 500 GLU A 219 -75.14 -67.87 REMARK 500 ALA A 220 -58.88 -25.65 REMARK 500 ASP A 231 -7.21 95.95 REMARK 500 GLU A 232 37.11 -80.80 REMARK 500 ASN A 234 49.14 -144.18 REMARK 500 LYS A 243 -62.60 -93.44 REMARK 500 ARG A 247 96.58 -170.92 REMARK 500 ARG A 253 -154.25 -175.38 REMARK 500 ASN A 257 110.77 -167.14 REMARK 500 LEU A 276 -40.48 166.77 REMARK 500 ASP A 277 102.69 30.41 REMARK 500 LYS A 278 -40.36 70.84 REMARK 500 GLU A 291 -71.36 -13.45 REMARK 500 ASP A 292 -137.85 -84.62 REMARK 500 GLU A 325 -56.23 -161.57 REMARK 500 ARG A 332 146.13 -176.56 REMARK 500 LYS A 339 88.20 54.94 REMARK 500 REMARK 500 THIS ENTRY HAS 81 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 235 PRO A 236 -148.89 REMARK 500 ILE B 1099 GLU B 1100 149.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 415 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH D 501 O REMARK 620 2 DDG D 813 OP2 60.9 REMARK 620 3 DDG D 813 OP1 109.1 50.2 REMARK 620 4 ASP A 7 OD2 86.8 145.5 164.0 REMARK 620 5 ASP A 105 OD1 106.5 100.4 74.3 99.9 REMARK 620 6 GLU A 106 OE2 132.7 102.6 80.1 90.5 120.5 REMARK 620 7 HOH A 502 O 50.5 104.9 135.0 54.5 75.5 144.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA H1415 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH H1504 O REMARK 620 2 DDG H1813 OP1 57.7 REMARK 620 3 GLU B1106 OE2 109.1 68.2 REMARK 620 4 HOH B1502 O 61.4 81.5 68.9 REMARK 620 5 HOH B1503 O 138.5 87.1 71.3 140.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA J1416 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH H1506 O REMARK 620 2 HOH H1507 O 65.5 REMARK 620 3 HOH H1509 O 67.6 66.5 REMARK 620 4 HOH H1510 O 58.2 36.3 96.9 REMARK 620 5 HOH J1505 O 176.8 111.4 110.8 119.8 REMARK 620 6 HOH J1508 O 63.0 123.9 74.5 119.0 119.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 415 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA H 1415 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA J 1416 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ASD RELATED DB: PDB REMARK 900 OXOG-MODIFIED INSERTION TERNARY COMPLEX REMARK 900 RELATED ID: 2ASJ RELATED DB: PDB REMARK 900 OXOG-MODIFIED PREINSERTION BINARY COMPLEX REMARK 900 RELATED ID: 2ASL RELATED DB: PDB REMARK 900 OXOG-MODIFIED POSTINSERTION BINARY COMPLEX REMARK 900 RELATED ID: 2ATL RELATED DB: PDB REMARK 900 UNMODIFIED INSERTION TERNARY COMPLEX DBREF 2AU0 A 2 352 UNP Q97W02 DPO42_SULSO 2 352 DBREF 2AU0 B 1002 1352 UNP Q97W02 DPO42_SULSO 2 352 DBREF 2AU0 D 801 813 PDB 2AU0 2AU0 801 813 DBREF 2AU0 E 901 919 PDB 2AU0 2AU0 901 919 DBREF 2AU0 H 1801 1813 PDB 2AU0 2AU0 1801 1813 DBREF 2AU0 J 1901 1919 PDB 2AU0 2AU0 1901 1919 SEQADV 2AU0 GLY A -7 UNP Q97W02 CLONING ARTIFACT SEQADV 2AU0 SER A -6 UNP Q97W02 CLONING ARTIFACT SEQADV 2AU0 HIS A -5 UNP Q97W02 CLONING ARTIFACT SEQADV 2AU0 MET A -4 UNP Q97W02 CLONING ARTIFACT SEQADV 2AU0 GLY A -3 UNP Q97W02 CLONING ARTIFACT SEQADV 2AU0 GLY A -2 UNP Q97W02 CLONING ARTIFACT SEQADV 2AU0 GLY A -1 UNP Q97W02 CLONING ARTIFACT SEQADV 2AU0 GLY A 0 UNP Q97W02 CLONING ARTIFACT SEQADV 2AU0 GLY A 1 UNP Q97W02 CLONING ARTIFACT SEQADV 2AU0 GLY B -7 UNP Q97W02 CLONING ARTIFACT SEQADV 2AU0 SER B -6 UNP Q97W02 CLONING ARTIFACT SEQADV 2AU0 HIS B -5 UNP Q97W02 CLONING ARTIFACT SEQADV 2AU0 MET B -4 UNP Q97W02 CLONING ARTIFACT SEQADV 2AU0 GLY B -3 UNP Q97W02 CLONING ARTIFACT SEQADV 2AU0 GLY B -2 UNP Q97W02 CLONING ARTIFACT SEQADV 2AU0 GLY B -1 UNP Q97W02 CLONING ARTIFACT SEQADV 2AU0 GLY B 0 UNP Q97W02 CLONING ARTIFACT SEQADV 2AU0 GLY B 1001 UNP Q97W02 CLONING ARTIFACT SEQRES 1 D 13 DG DG DT DT DG DG DA DT DG DG DT DA DDG SEQRES 1 E 19 DC DT DA DA DC DG DC DT DA DC DC DA DT SEQRES 2 E 19 DC DC DA DA DC DC SEQRES 1 H 13 DG DG DT DT DG DG DA DT DG DG DT DA DDG SEQRES 1 J 19 DC DT DA DA DC DG DC DT DA DC DC DA DT SEQRES 2 J 19 DC DC DA DA DC DC SEQRES 1 A 360 GLY SER HIS MET GLY GLY GLY GLY GLY ILE VAL LEU PHE SEQRES 2 A 360 VAL ASP PHE ASP TYR PHE TYR ALA GLN VAL GLU GLU VAL SEQRES 3 A 360 LEU ASN PRO SER LEU LYS GLY LYS PRO VAL VAL VAL CYS SEQRES 4 A 360 VAL PHE SER GLY ARG PHE GLU ASP SER GLY ALA VAL ALA SEQRES 5 A 360 THR ALA ASN TYR GLU ALA ARG LYS PHE GLY VAL LYS ALA SEQRES 6 A 360 GLY ILE PRO ILE VAL GLU ALA LYS LYS ILE LEU PRO ASN SEQRES 7 A 360 ALA VAL TYR LEU PRO MET ARG LYS GLU VAL TYR GLN GLN SEQRES 8 A 360 VAL SER SER ARG ILE MET ASN LEU LEU ARG GLU TYR SER SEQRES 9 A 360 GLU LYS ILE GLU ILE ALA SER ILE ASP GLU ALA TYR LEU SEQRES 10 A 360 ASP ILE SER ASP LYS VAL ARG ASP TYR ARG GLU ALA TYR SEQRES 11 A 360 ASN LEU GLY LEU GLU ILE LYS ASN LYS ILE LEU GLU LYS SEQRES 12 A 360 GLU LYS ILE THR VAL THR VAL GLY ILE SER LYS ASN LYS SEQRES 13 A 360 VAL PHE ALA LYS ILE ALA ALA ASP MET ALA LYS PRO ASN SEQRES 14 A 360 GLY ILE LYS VAL ILE ASP ASP GLU GLU VAL LYS ARG LEU SEQRES 15 A 360 ILE ARG GLU LEU ASP ILE ALA ASP VAL PRO GLY ILE GLY SEQRES 16 A 360 ASN ILE THR ALA GLU LYS LEU LYS LYS LEU GLY ILE ASN SEQRES 17 A 360 LYS LEU VAL ASP THR LEU SER ILE GLU PHE ASP LYS LEU SEQRES 18 A 360 LYS GLY MET ILE GLY GLU ALA LYS ALA LYS TYR LEU ILE SEQRES 19 A 360 SER LEU ALA ARG ASP GLU TYR ASN GLU PRO ILE ARG THR SEQRES 20 A 360 ARG VAL ARG LYS SER ILE GLY ARG ILE VAL THR MET LYS SEQRES 21 A 360 ARG ASN SER ARG ASN LEU GLU GLU ILE LYS PRO TYR LEU SEQRES 22 A 360 PHE ARG ALA ILE GLU GLU SER TYR TYR LYS LEU ASP LYS SEQRES 23 A 360 ARG ILE PRO LYS ALA ILE HIS VAL VAL ALA VAL THR GLU SEQRES 24 A 360 ASP LEU ASP ILE VAL SER ARG GLY ARG THR PHE PRO HIS SEQRES 25 A 360 GLY ILE SER LYS GLU THR ALA TYR SER GLU SER VAL LYS SEQRES 26 A 360 LEU LEU GLN LYS ILE LEU GLU GLU ASP GLU ARG LYS ILE SEQRES 27 A 360 ARG ARG ILE GLY VAL ARG PHE SER LYS PHE ILE GLU ALA SEQRES 28 A 360 ILE GLY LEU ASP LYS PHE PHE ASP THR SEQRES 1 B 360 GLY SER HIS MET GLY GLY GLY GLY GLY ILE VAL LEU PHE SEQRES 2 B 360 VAL ASP PHE ASP TYR PHE TYR ALA GLN VAL GLU GLU VAL SEQRES 3 B 360 LEU ASN PRO SER LEU LYS GLY LYS PRO VAL VAL VAL CYS SEQRES 4 B 360 VAL PHE SER GLY ARG PHE GLU ASP SER GLY ALA VAL ALA SEQRES 5 B 360 THR ALA ASN TYR GLU ALA ARG LYS PHE GLY VAL LYS ALA SEQRES 6 B 360 GLY ILE PRO ILE VAL GLU ALA LYS LYS ILE LEU PRO ASN SEQRES 7 B 360 ALA VAL TYR LEU PRO MET ARG LYS GLU VAL TYR GLN GLN SEQRES 8 B 360 VAL SER SER ARG ILE MET ASN LEU LEU ARG GLU TYR SER SEQRES 9 B 360 GLU LYS ILE GLU ILE ALA SER ILE ASP GLU ALA TYR LEU SEQRES 10 B 360 ASP ILE SER ASP LYS VAL ARG ASP TYR ARG GLU ALA TYR SEQRES 11 B 360 ASN LEU GLY LEU GLU ILE LYS ASN LYS ILE LEU GLU LYS SEQRES 12 B 360 GLU LYS ILE THR VAL THR VAL GLY ILE SER LYS ASN LYS SEQRES 13 B 360 VAL PHE ALA LYS ILE ALA ALA ASP MET ALA LYS PRO ASN SEQRES 14 B 360 GLY ILE LYS VAL ILE ASP ASP GLU GLU VAL LYS ARG LEU SEQRES 15 B 360 ILE ARG GLU LEU ASP ILE ALA ASP VAL PRO GLY ILE GLY SEQRES 16 B 360 ASN ILE THR ALA GLU LYS LEU LYS LYS LEU GLY ILE ASN SEQRES 17 B 360 LYS LEU VAL ASP THR LEU SER ILE GLU PHE ASP LYS LEU SEQRES 18 B 360 LYS GLY MET ILE GLY GLU ALA LYS ALA LYS TYR LEU ILE SEQRES 19 B 360 SER LEU ALA ARG ASP GLU TYR ASN GLU PRO ILE ARG THR SEQRES 20 B 360 ARG VAL ARG LYS SER ILE GLY ARG ILE VAL THR MET LYS SEQRES 21 B 360 ARG ASN SER ARG ASN LEU GLU GLU ILE LYS PRO TYR LEU SEQRES 22 B 360 PHE ARG ALA ILE GLU GLU SER TYR TYR LYS LEU ASP LYS SEQRES 23 B 360 ARG ILE PRO LYS ALA ILE HIS VAL VAL ALA VAL THR GLU SEQRES 24 B 360 ASP LEU ASP ILE VAL SER ARG GLY ARG THR PHE PRO HIS SEQRES 25 B 360 GLY ILE SER LYS GLU THR ALA TYR SER GLU SER VAL LYS SEQRES 26 B 360 LEU LEU GLN LYS ILE LEU GLU GLU ASP GLU ARG LYS ILE SEQRES 27 B 360 ARG ARG ILE GLY VAL ARG PHE SER LYS PHE ILE GLU ALA SEQRES 28 B 360 ILE GLY LEU ASP LYS PHE PHE ASP THR MODRES 2AU0 DDG D 813 DG MODRES 2AU0 DDG H 1813 DG HET DDG D 813 21 HET DDG H1813 21 HET CA H1415 1 HET CA J1416 1 HET CA A 415 1 HETNAM DDG 2',3'-DIDEOXY-GUANOSINE-5'-MONOPHOSPHATE HETNAM CA CALCIUM ION FORMUL 1 DDG 2(C10 H14 N5 O6 P) FORMUL 7 CA 3(CA 2+) FORMUL 10 HOH *118(H2 O) HELIX 1 1 TYR A 10 ASN A 20 1 11 HELIX 2 2 PRO A 60 LEU A 68 1 9 HELIX 3 3 ARG A 77 TYR A 95 1 19 HELIX 4 4 ASP A 117 LYS A 137 1 21 HELIX 5 5 ASN A 147 ALA A 158 1 12 HELIX 6 6 ASP A 167 LEU A 178 1 12 HELIX 7 7 GLY A 187 LEU A 197 1 11 HELIX 8 8 LEU A 202 SER A 207 5 6 HELIX 9 9 PHE A 210 GLY A 215 1 6 HELIX 10 10 GLY A 218 ASP A 231 1 14 HELIX 11 11 ASN A 257 LYS A 275 1 19 HELIX 12 12 SER A 307 LYS A 321 1 15 HELIX 13 13 TYR B 1010 ASN B 1020 1 11 HELIX 14 14 ASN B 1047 LYS B 1052 1 6 HELIX 15 15 PRO B 1060 LYS B 1066 1 7 HELIX 16 16 ARG B 1077 VAL B 1080 5 4 HELIX 17 17 TYR B 1081 ARG B 1093 1 13 HELIX 18 18 GLU B 1094 SER B 1096 5 3 HELIX 19 19 ASP B 1117 LYS B 1137 1 21 HELIX 20 20 ASN B 1147 ALA B 1158 1 12 HELIX 21 21 ARG B 1173 GLU B 1177 5 5 HELIX 22 22 ASN B 1188 LYS B 1196 1 9 HELIX 23 23 LYS B 1201 SER B 1207 5 7 HELIX 24 24 GLU B 1209 GLY B 1218 1 10 HELIX 25 25 GLY B 1218 ARG B 1230 1 13 HELIX 26 26 ILE B 1261 LYS B 1275 1 15 HELIX 27 27 SER B 1307 GLU B 1324 1 18 SHEET 1 A 5 GLU A 100 ILE A 101 0 SHEET 2 A 5 GLU A 106 LEU A 109 -1 O TYR A 108 N GLU A 100 SHEET 3 A 5 VAL A 3 ASP A 7 -1 N LEU A 4 O LEU A 109 SHEET 4 A 5 VAL A 142 SER A 145 -1 O GLY A 143 N PHE A 5 SHEET 5 A 5 ILE A 163 VAL A 165 1 O LYS A 164 N ILE A 144 SHEET 1 B 3 ALA A 42 ALA A 46 0 SHEET 2 B 3 VAL A 28 VAL A 32 -1 N VAL A 30 O ALA A 44 SHEET 3 B 3 VAL A 72 LEU A 74 1 O LEU A 74 N CYS A 31 SHEET 1 C 4 GLY A 246 VAL A 249 0 SHEET 2 C 4 ILE A 330 PHE A 340 -1 O ILE A 333 N VAL A 249 SHEET 3 C 4 PRO A 281 THR A 290 -1 N LYS A 282 O LYS A 339 SHEET 4 C 4 ARG A 298 THR A 301 -1 O ARG A 300 N ILE A 284 SHEET 1 D 5 ILE B1099 SER B1103 0 SHEET 2 D 5 GLU B1106 ASP B1110 -1 O TYR B1108 N GLU B1100 SHEET 3 D 5 VAL B1003 PHE B1008 -1 N LEU B1004 O LEU B1109 SHEET 4 D 5 VAL B1140 SER B1145 -1 O THR B1141 N ASP B1007 SHEET 5 D 5 ILE B1163 ILE B1166 1 O ILE B1166 N ILE B1144 SHEET 1 E 2 CYS B1031 PHE B1033 0 SHEET 2 E 2 GLY B1041 VAL B1043 -1 O ALA B1042 N VAL B1032 SHEET 1 F 4 SER B1244 THR B1250 0 SHEET 2 F 4 ILE B1330 PHE B1340 -1 O PHE B1337 N ILE B1245 SHEET 3 F 4 PRO B1281 THR B1290 -1 N HIS B1285 O ARG B1336 SHEET 4 F 4 ILE B1295 THR B1301 -1 O ARG B1298 N VAL B1286 LINK O3' DA D 812 P DDG D 813 1555 1555 1.59 LINK O3' DA H1812 P DDG H1813 1555 1555 1.63 LINK O HOH D 501 CA CA A 415 1555 1555 2.84 LINK OP2 DDG D 813 CA CA A 415 1555 1555 3.14 LINK OP1 DDG D 813 CA CA A 415 1555 1555 2.88 LINK CA CA H1415 O HOH H1504 1555 1555 3.21 LINK CA CA H1415 OP1 DDG H1813 1555 1555 2.33 LINK CA CA H1415 OE2 GLU B1106 1555 1555 2.50 LINK CA CA H1415 O HOH B1502 1555 1555 2.51 LINK CA CA H1415 O HOH B1503 1555 1555 2.79 LINK O HOH H1506 CA CA J1416 1555 1555 2.62 LINK O HOH H1507 CA CA J1416 1555 1555 2.42 LINK O HOH H1509 CA CA J1416 1555 1555 3.31 LINK O HOH H1510 CA CA J1416 1555 1555 3.17 LINK CA CA J1416 O HOH J1505 1555 1555 2.77 LINK CA CA J1416 O HOH J1508 1555 1555 2.08 LINK OD2 ASP A 7 CA CA A 415 1555 1555 3.11 LINK OD1 ASP A 105 CA CA A 415 1555 1555 2.66 LINK OE2 GLU A 106 CA CA A 415 1555 1555 2.61 LINK CA CA A 415 O HOH A 502 1555 1555 2.52 SITE 1 AC1 6 ASP A 7 ASP A 105 GLU A 106 HOH A 502 SITE 2 AC1 6 HOH D 501 DDG D 813 SITE 1 AC2 4 GLU B1106 HOH B1502 HOH B1503 DDG H1813 SITE 1 AC3 4 HOH H1506 HOH H1507 HOH J1505 HOH J1508 CRYST1 51.644 180.962 51.571 90.00 107.00 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019363 0.000000 0.005920 0.00000 SCALE2 0.000000 0.005526 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020277 0.00000