data_2AYV
#
_entry.id 2AYV
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.376
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 2AYV pdb_00002ayv 10.2210/pdb2ayv/pdb
RCSB RCSB034466 ? ?
WWPDB D_1000034466 ? ?
#
_pdbx_database_status.entry_id 2AYV
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.recvd_initial_deposition_date 2005-09-08
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.SG_entry Y
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Tempel, W.' 1
'Dong, A.' 2
'Zhao, Y.' 3
'Lew, J.' 4
'Alam, Z.' 5
'Melone, M.' 6
'Wasney, G.' 7
'Kozieradzki, I.' 8
'Vedadi, M.' 9
'Arrowsmith, C.' 10
'Sundstrom, M.' 11
'Weigelt, J.' 12
'Edwards, A.' 13
'Bochkarev, A.' 14
'Hui, R.' 15
'Amani, M.' 16
'Structural Genomics Consortium (SGC)' 17
#
_citation.id primary
_citation.title
'Genome-scale protein expression and structural biology of Plasmodium falciparum and related Apicomplexan organisms.'
_citation.journal_abbrev Mol.Biochem.Parasitol.
_citation.journal_volume 151
_citation.page_first 100
_citation.page_last 110
_citation.year 2007
_citation.journal_id_ASTM MBIPDP
_citation.country NE
_citation.journal_id_ISSN 0166-6851
_citation.journal_id_CSD 2085
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 17125854
_citation.pdbx_database_id_DOI 10.1016/j.molbiopara.2006.10.011
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Vedadi, M.' 1 ?
primary 'Lew, J.' 2 ?
primary 'Artz, J.' 3 ?
primary 'Amani, M.' 4 ?
primary 'Zhao, Y.' 5 ?
primary 'Dong, A.' 6 ?
primary 'Wasney, G.A.' 7 ?
primary 'Gao, M.' 8 ?
primary 'Hills, T.' 9 ?
primary 'Brokx, S.' 10 ?
primary 'Qiu, W.' 11 ?
primary 'Sharma, S.' 12 ?
primary 'Diassiti, A.' 13 ?
primary 'Alam, Z.' 14 ?
primary 'Melone, M.' 15 ?
primary 'Mulichak, A.' 16 ?
primary 'Wernimont, A.' 17 ?
primary 'Bray, J.' 18 ?
primary 'Loppnau, P.' 19 ?
primary 'Plotnikova, O.' 20 ?
primary 'Newberry, K.' 21 ?
primary 'Sundararajan, E.' 22 ?
primary 'Houston, S.' 23 ?
primary 'Walker, J.' 24 ?
primary 'Tempel, W.' 25 ?
primary 'Bochkarev, A.' 26 ?
primary 'Kozieradzki, I.' 27 ?
primary 'Edwards, A.' 28 ?
primary 'Arrowsmith, C.' 29 ?
primary 'Roos, D.' 30 ?
primary 'Kain, K.' 31 ?
primary 'Hui, R.' 32 ?
#
_cell.length_a 46.553
_cell.length_b 85.611
_cell.length_c 89.612
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.entry_id 2AYV
_cell.pdbx_unique_axis ?
_cell.Z_PDB 8
#
_symmetry.space_group_name_H-M 'I 2 2 2'
_symmetry.Int_Tables_number 23
_symmetry.entry_id 2AYV
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.space_group_name_Hall ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man 'ubiquitin-conjugating enzyme E2' 18815.109 1 6.3.2.19 ? ? ?
2 non-polymer syn 'UNKNOWN ATOM OR ION' ? 10 ? ? ? ?
3 water nat water 18.015 16 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code
;MGSSHHHHHHSSGRENLYFQGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDY
PFKPPKVNFTTKIYHPNINSQGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTARE
WSQKYA
;
_entity_poly.pdbx_seq_one_letter_code_can
;MGSSHHHHHHSSGRENLYFQGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDY
PFKPPKVNFTTKIYHPNINSQGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTARE
WSQKYA
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET n
1 2 GLY n
1 3 SER n
1 4 SER n
1 5 HIS n
1 6 HIS n
1 7 HIS n
1 8 HIS n
1 9 HIS n
1 10 HIS n
1 11 SER n
1 12 SER n
1 13 GLY n
1 14 ARG n
1 15 GLU n
1 16 ASN n
1 17 LEU n
1 18 TYR n
1 19 PHE n
1 20 GLN n
1 21 GLY n
1 22 ALA n
1 23 LEU n
1 24 LYS n
1 25 ARG n
1 26 ILE n
1 27 ASN n
1 28 LYS n
1 29 GLU n
1 30 LEU n
1 31 ASN n
1 32 ASP n
1 33 LEU n
1 34 SER n
1 35 LYS n
1 36 ASP n
1 37 PRO n
1 38 PRO n
1 39 THR n
1 40 ASN n
1 41 CYS n
1 42 SER n
1 43 ALA n
1 44 GLY n
1 45 PRO n
1 46 VAL n
1 47 GLY n
1 48 ASP n
1 49 ASP n
1 50 MET n
1 51 PHE n
1 52 HIS n
1 53 TRP n
1 54 GLN n
1 55 ALA n
1 56 THR n
1 57 ILE n
1 58 MET n
1 59 GLY n
1 60 PRO n
1 61 GLU n
1 62 ASP n
1 63 SER n
1 64 PRO n
1 65 TYR n
1 66 SER n
1 67 GLY n
1 68 GLY n
1 69 VAL n
1 70 PHE n
1 71 PHE n
1 72 LEU n
1 73 ASN n
1 74 ILE n
1 75 HIS n
1 76 PHE n
1 77 PRO n
1 78 SER n
1 79 ASP n
1 80 TYR n
1 81 PRO n
1 82 PHE n
1 83 LYS n
1 84 PRO n
1 85 PRO n
1 86 LYS n
1 87 VAL n
1 88 ASN n
1 89 PHE n
1 90 THR n
1 91 THR n
1 92 LYS n
1 93 ILE n
1 94 TYR n
1 95 HIS n
1 96 PRO n
1 97 ASN n
1 98 ILE n
1 99 ASN n
1 100 SER n
1 101 GLN n
1 102 GLY n
1 103 ALA n
1 104 ILE n
1 105 CYS n
1 106 LEU n
1 107 ASP n
1 108 ILE n
1 109 LEU n
1 110 LYS n
1 111 ASP n
1 112 GLN n
1 113 TRP n
1 114 SER n
1 115 PRO n
1 116 ALA n
1 117 LEU n
1 118 THR n
1 119 ILE n
1 120 SER n
1 121 LYS n
1 122 VAL n
1 123 LEU n
1 124 LEU n
1 125 SER n
1 126 ILE n
1 127 SER n
1 128 SER n
1 129 LEU n
1 130 LEU n
1 131 THR n
1 132 ASP n
1 133 PRO n
1 134 ASN n
1 135 PRO n
1 136 ASP n
1 137 ASP n
1 138 PRO n
1 139 LEU n
1 140 VAL n
1 141 PRO n
1 142 GLU n
1 143 ILE n
1 144 ALA n
1 145 HIS n
1 146 LEU n
1 147 TYR n
1 148 LYS n
1 149 SER n
1 150 ASP n
1 151 ARG n
1 152 MET n
1 153 ARG n
1 154 TYR n
1 155 ASP n
1 156 GLN n
1 157 THR n
1 158 ALA n
1 159 ARG n
1 160 GLU n
1 161 TRP n
1 162 SER n
1 163 GLN n
1 164 LYS n
1 165 TYR n
1 166 ALA n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type ?
_entity_src_gen.pdbx_beg_seq_num ?
_entity_src_gen.pdbx_end_seq_num ?
_entity_src_gen.gene_src_common_name ?
_entity_src_gen.gene_src_genus Toxoplasma
_entity_src_gen.pdbx_gene_src_gene ?
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Toxoplasma gondii'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5811
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562
_entity_src_gen.host_org_genus Escherichia
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain 'BL21 (DE3) CodonPlus-RIL'
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type plasmid
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name p15TvL
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
_struct_ref.id 1
_struct_ref.entity_id 1
_struct_ref.db_name PDB
_struct_ref.db_code 2AYV
_struct_ref.pdbx_db_accession 2AYV
_struct_ref.pdbx_db_isoform ?
_struct_ref.pdbx_seq_one_letter_code ?
_struct_ref.pdbx_align_begin ?
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 2AYV
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 166
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession 2AYV
_struct_ref_seq.db_align_beg -19
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 146
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg -19
_struct_ref_seq.pdbx_auth_seq_align_end 146
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ?
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
_exptl.crystals_number 1
_exptl.method 'X-RAY DIFFRACTION'
_exptl.entry_id 2AYV
#
_exptl_crystal.id 1
_exptl_crystal.density_percent_sol 53.7
_exptl_crystal.density_Matthews 2.7
_exptl_crystal.density_meas ?
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP'
_exptl_crystal_grow.pH 4.6
_exptl_crystal_grow.temp 291
_exptl_crystal_grow.pdbx_details
'3.5M sodium formate, 0.1M sodium acetate, pH 4.6, vapor diffusion, sitting drop, temperature 291K'
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pdbx_pH_range .
#
_diffrn.id 1
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector 'IMAGE PLATE'
_diffrn_detector.type 'RIGAKU RAXIS'
_diffrn_detector.pdbx_collection_date 2005-09-06
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.5418
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type 'RIGAKU FR-E'
_diffrn_source.pdbx_wavelength_list 1.5418
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
#
_reflns.entry_id 2AYV
_reflns.d_resolution_low 20.00
_reflns.d_resolution_high 2.00
_reflns.number_obs 12360
_reflns.percent_possible_obs 99.200
_reflns.pdbx_Rmerge_I_obs 0.038
_reflns.pdbx_chi_squared 1.021
_reflns.pdbx_redundancy 5.700
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_netI_over_sigmaI ?
_reflns.pdbx_Rsym_value ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.number_all ?
_reflns.B_iso_Wilson_estimate ?
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_ordinal 1
_reflns.pdbx_diffrn_id 1
#
loop_
_reflns_shell.d_res_low
_reflns_shell.d_res_high
_reflns_shell.number_measured_obs
_reflns_shell.percent_possible_obs
_reflns_shell.Rmerge_I_obs
_reflns_shell.pdbx_chi_squared
_reflns_shell.pdbx_redundancy
_reflns_shell.number_unique_obs
_reflns_shell.meanI_over_sigI_obs
_reflns_shell.pdbx_Rsym_value
_reflns_shell.percent_possible_all
_reflns_shell.number_unique_all
_reflns_shell.number_measured_all
_reflns_shell.pdbx_ordinal
_reflns_shell.pdbx_diffrn_id
2.15 2.00 2351 96.200 0.331 1.100 5.400 ? ? ? ? ? ? 1 1
2.37 2.15 2444 99.900 0.195 1.050 5.700 ? ? ? ? ? ? 2 1
2.71 2.37 2467 100.000 0.092 0.992 5.800 ? ? ? ? ? ? 3 1
3.42 2.71 2494 100.000 0.041 1.035 5.900 ? ? ? ? ? ? 4 1
20.00 3.42 2604 99.900 0.025 0.941 5.800 ? ? ? ? ? ? 5 1
#
_refine.details ?
_refine.B_iso_mean 20.822
_refine.aniso_B[1][1] 1.984
_refine.aniso_B[2][2] 0.390
_refine.aniso_B[3][3] -2.374
_refine.aniso_B[1][2] 0.000
_refine.aniso_B[1][3] 0.000
_refine.aniso_B[2][3] 0.000
_refine.solvent_model_details 'MASK BULK SOLVENT'
_refine.pdbx_solvent_vdw_probe_radii 1.200
_refine.pdbx_solvent_ion_probe_radii 0.800
_refine.pdbx_solvent_shrinkage_radii 0.800
_refine.ls_d_res_high 2.001
_refine.ls_d_res_low 20.000
_refine.ls_number_reflns_R_free 597
_refine.ls_number_reflns_obs 12359
_refine.ls_R_factor_R_work 0.2261
_refine.ls_R_factor_R_free 0.258
_refine.ls_R_factor_all 0.228
_refine.ls_wR_factor_R_work 0.260
_refine.ls_wR_factor_R_free 0.275
_refine.ls_percent_reflns_obs 99.333
_refine.ls_percent_reflns_R_free 4.830
_refine.correlation_coeff_Fo_to_Fc 0.952
_refine.correlation_coeff_Fo_to_Fc_free 0.929
_refine.pdbx_overall_ESU_R 0.187
_refine.pdbx_overall_ESU_R_Free 0.165
_refine.overall_SU_ML 0.167
_refine.overall_SU_B 12.897
_refine.entry_id 2AYV
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_ls_sigma_I ?
_refine.ls_number_reflns_all ?
_refine.ls_R_factor_obs ?
_refine.ls_redundancy_reflns_obs ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_starting_model 1X23
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_stereochemistry_target_values ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.pdbx_isotropic_thermal_model ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL'
_refine.pdbx_diffrn_id 1
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 1132
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 10
_refine_hist.number_atoms_solvent 16
_refine_hist.number_atoms_total 1158
_refine_hist.d_res_high 2.001
_refine_hist.d_res_low 20.000
#
loop_
_refine_ls_restr.type
_refine_ls_restr.number
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
r_bond_refined_d 1176 0.016 0.022 ? 'X-RAY DIFFRACTION' ?
r_angle_refined_deg 1614 1.408 1.952 ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_1_deg 147 6.150 5.000 ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_2_deg 51 35.319 24.706 ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_3_deg 163 14.402 15.000 ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_4_deg 3 8.024 15.000 ? 'X-RAY DIFFRACTION' ?
r_chiral_restr 174 0.091 0.200 ? 'X-RAY DIFFRACTION' ?
r_gen_planes_refined 932 0.006 0.020 ? 'X-RAY DIFFRACTION' ?
r_nbd_refined 528 0.181 0.200 ? 'X-RAY DIFFRACTION' ?
r_nbtor_refined 800 0.305 0.200 ? 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_refined 57 0.141 0.200 ? 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_refined 42 0.296 0.200 ? 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_refined 2 0.212 0.200 ? 'X-RAY DIFFRACTION' ?
r_mcbond_it 768 2.453 2.000 ? 'X-RAY DIFFRACTION' ?
r_mcangle_it 1216 3.303 3.000 ? 'X-RAY DIFFRACTION' ?
r_scbond_it 477 2.869 2.000 ? 'X-RAY DIFFRACTION' ?
r_scangle_it 398 3.666 3.000 ? 'X-RAY DIFFRACTION' ?
#
loop_
_refine_ls_shell.pdbx_total_number_of_bins_used
_refine_ls_shell.d_res_low
_refine_ls_shell.d_res_high
_refine_ls_shell.number_reflns_all
_refine_ls_shell.percent_reflns_obs
_refine_ls_shell.number_reflns_R_work
_refine_ls_shell.R_factor_R_work
_refine_ls_shell.number_reflns_R_free
_refine_ls_shell.R_factor_R_free
_refine_ls_shell.number_reflns_obs
_refine_ls_shell.R_factor_R_free_error
_refine_ls_shell.percent_reflns_R_free
_refine_ls_shell.redundancy_reflns_obs
_refine_ls_shell.pdbx_refine_id
_refine_ls_shell.R_factor_all
20 2.052 2.001 881 92.849 780 0.327 38 0.434 . . . . 'X-RAY DIFFRACTION' .
20 2.108 2.052 880 98.636 824 0.294 44 0.366 . . . . 'X-RAY DIFFRACTION' .
20 2.168 2.108 845 99.645 789 0.284 53 0.252 . . . . 'X-RAY DIFFRACTION' .
20 2.234 2.168 838 99.761 799 0.256 37 0.374 . . . . 'X-RAY DIFFRACTION' .
20 2.306 2.234 804 100.000 766 0.246 38 0.27 . . . . 'X-RAY DIFFRACTION' .
20 2.386 2.306 785 100.000 747 0.264 38 0.258 . . . . 'X-RAY DIFFRACTION' .
20 2.475 2.386 739 100.000 706 0.242 33 0.337 . . . . 'X-RAY DIFFRACTION' .
20 2.574 2.475 731 100.000 696 0.247 35 0.376 . . . . 'X-RAY DIFFRACTION' .
20 2.687 2.574 699 100.000 665 0.239 34 0.245 . . . . 'X-RAY DIFFRACTION' .
20 2.815 2.687 671 100.000 646 0.254 25 0.22 . . . . 'X-RAY DIFFRACTION' .
20 2.964 2.815 634 100.000 608 0.246 26 0.229 . . . . 'X-RAY DIFFRACTION' .
20 3.140 2.964 615 100.000 583 0.247 32 0.306 . . . . 'X-RAY DIFFRACTION' .
20 3.351 3.140 568 100.000 537 0.236 31 0.283 . . . . 'X-RAY DIFFRACTION' .
20 3.611 3.351 545 100.000 522 0.223 23 0.255 . . . . 'X-RAY DIFFRACTION' .
20 3.943 3.611 491 99.796 459 0.197 31 0.269 . . . . 'X-RAY DIFFRACTION' .
20 4.387 3.943 464 100.000 443 0.182 21 0.244 . . . . 'X-RAY DIFFRACTION' .
20 5.025 4.387 403 100.000 388 0.181 15 0.165 . . . . 'X-RAY DIFFRACTION' .
20 6.060 5.025 362 100.000 336 0.235 26 0.244 . . . . 'X-RAY DIFFRACTION' .
20 8.202 6.060 290 100.000 279 0.234 11 0.194 . . . . 'X-RAY DIFFRACTION' .
20 20.000 8.202 197 98.985 189 0.187 6 0.193 . . . . 'X-RAY DIFFRACTION' .
#
_struct.entry_id 2AYV
_struct.title 'Crystal structure of a putative ubiquitin-conjugating enzyme E2 from Toxoplasma gondii'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.text
'Structural Genomics, Structural Genomics Consortium, ubiquitin, ubiquitin-conjugating enzyme, SGC, LIGASE'
_struct_keywords.entry_id 2AYV
_struct_keywords.pdbx_keywords LIGASE
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 2 ?
D N N 2 ?
E N N 2 ?
F N N 2 ?
G N N 2 ?
H N N 2 ?
I N N 2 ?
J N N 2 ?
K N N 2 ?
L N N 3 ?
#
_struct_biol.id 1
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 1 GLY A 21 ? ASP A 36 ? GLY A 1 ASP A 16 1 ? 16
HELX_P HELX_P2 2 LEU A 106 ? LYS A 110 ? LEU A 86 LYS A 90 5 ? 5
HELX_P HELX_P3 3 THR A 118 ? ASP A 132 ? THR A 98 ASP A 112 1 ? 15
HELX_P HELX_P4 4 VAL A 140 ? ASP A 150 ? VAL A 120 ASP A 130 1 ? 11
HELX_P HELX_P5 5 ASP A 150 ? ALA A 166 ? ASP A 130 ALA A 146 1 ? 17
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
_struct_mon_prot_cis.pdbx_id 1
_struct_mon_prot_cis.label_comp_id TYR
_struct_mon_prot_cis.label_seq_id 80
_struct_mon_prot_cis.label_asym_id A
_struct_mon_prot_cis.label_alt_id .
_struct_mon_prot_cis.pdbx_PDB_ins_code ?
_struct_mon_prot_cis.auth_comp_id TYR
_struct_mon_prot_cis.auth_seq_id 60
_struct_mon_prot_cis.auth_asym_id A
_struct_mon_prot_cis.pdbx_label_comp_id_2 PRO
_struct_mon_prot_cis.pdbx_label_seq_id_2 81
_struct_mon_prot_cis.pdbx_label_asym_id_2 A
_struct_mon_prot_cis.pdbx_PDB_ins_code_2 ?
_struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO
_struct_mon_prot_cis.pdbx_auth_seq_id_2 61
_struct_mon_prot_cis.pdbx_auth_asym_id_2 A
_struct_mon_prot_cis.pdbx_PDB_model_num 1
_struct_mon_prot_cis.pdbx_omega_angle 4.77
#
_struct_sheet.id A
_struct_sheet.type ?
_struct_sheet.number_strands 4
_struct_sheet.details ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
A 2 3 ? anti-parallel
A 3 4 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 CYS A 41 ? PRO A 45 ? CYS A 21 PRO A 25
A 2 HIS A 52 ? MET A 58 ? HIS A 32 MET A 38
A 3 VAL A 69 ? HIS A 75 ? VAL A 49 HIS A 55
A 4 LYS A 86 ? PHE A 89 ? LYS A 66 PHE A 69
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 N SER A 42 ? N SER A 22 O THR A 56 ? O THR A 36
A 2 3 N ALA A 55 ? N ALA A 35 O LEU A 72 ? O LEU A 52
A 3 4 N ASN A 73 ? N ASN A 53 O ASN A 88 ? O ASN A 68
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A UNX 147 ? 2 'BINDING SITE FOR RESIDUE UNX A 147'
AC2 Software A UNX 148 ? 3 'BINDING SITE FOR RESIDUE UNX A 148'
AC3 Software A UNX 149 ? 3 'BINDING SITE FOR RESIDUE UNX A 149'
AC4 Software A UNX 150 ? 2 'BINDING SITE FOR RESIDUE UNX A 150'
AC5 Software A UNX 151 ? 1 'BINDING SITE FOR RESIDUE UNX A 151'
AC6 Software A UNX 152 ? 2 'BINDING SITE FOR RESIDUE UNX A 152'
AC7 Software A UNX 153 ? 3 'BINDING SITE FOR RESIDUE UNX A 153'
AC8 Software A UNX 154 ? 1 'BINDING SITE FOR RESIDUE UNX A 154'
AC9 Software A UNX 155 ? 1 'BINDING SITE FOR RESIDUE UNX A 155'
BC1 Software A UNX 156 ? 2 'BINDING SITE FOR RESIDUE UNX A 156'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 2 ILE A 93 ? ILE A 73 . ? 1_555 ?
2 AC1 2 ASN A 99 ? ASN A 79 . ? 1_555 ?
3 AC2 3 LEU A 106 ? LEU A 86 . ? 1_555 ?
4 AC2 3 ASP A 107 ? ASP A 87 . ? 1_555 ?
5 AC2 3 ILE A 108 ? ILE A 88 . ? 1_555 ?
6 AC3 3 GLN A 54 ? GLN A 34 . ? 8_566 ?
7 AC3 3 GLU A 61 ? GLU A 41 . ? 1_555 ?
8 AC3 3 UNX E . ? UNX A 150 . ? 1_555 ?
9 AC4 2 ASP A 62 ? ASP A 42 . ? 1_555 ?
10 AC4 2 UNX D . ? UNX A 149 . ? 1_555 ?
11 AC5 1 SER A 125 ? SER A 105 . ? 1_555 ?
12 AC6 2 ARG A 153 ? ARG A 133 . ? 1_555 ?
13 AC6 2 THR A 157 ? THR A 137 . ? 1_555 ?
14 AC7 3 GLU A 29 ? GLU A 9 . ? 1_555 ?
15 AC7 3 ILE A 119 ? ILE A 99 . ? 1_555 ?
16 AC7 3 SER A 120 ? SER A 100 . ? 1_555 ?
17 AC8 1 LEU A 139 ? LEU A 119 . ? 1_555 ?
18 AC9 1 ASP A 132 ? ASP A 112 . ? 1_555 ?
19 BC1 2 HIS A 75 ? HIS A 55 . ? 1_555 ?
20 BC1 2 LYS A 86 ? LYS A 66 . ? 1_555 ?
#
_atom_sites.entry_id 2AYV
_atom_sites.fract_transf_matrix[1][1] 0.02148
_atom_sites.fract_transf_matrix[1][2] 0.00000
_atom_sites.fract_transf_matrix[1][3] 0.00000
_atom_sites.fract_transf_matrix[2][1] 0.00000
_atom_sites.fract_transf_matrix[2][2] 0.01168
_atom_sites.fract_transf_matrix[2][3] 0.00000
_atom_sites.fract_transf_matrix[3][1] 0.00000
_atom_sites.fract_transf_matrix[3][2] 0.00000
_atom_sites.fract_transf_matrix[3][3] 0.01116
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
S
X
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 MET 1 -19 ? ? ? A . n
A 1 2 GLY 2 -18 ? ? ? A . n
A 1 3 SER 3 -17 ? ? ? A . n
A 1 4 SER 4 -16 ? ? ? A . n
A 1 5 HIS 5 -15 ? ? ? A . n
A 1 6 HIS 6 -14 ? ? ? A . n
A 1 7 HIS 7 -13 ? ? ? A . n
A 1 8 HIS 8 -12 ? ? ? A . n
A 1 9 HIS 9 -11 ? ? ? A . n
A 1 10 HIS 10 -10 ? ? ? A . n
A 1 11 SER 11 -9 ? ? ? A . n
A 1 12 SER 12 -8 ? ? ? A . n
A 1 13 GLY 13 -7 ? ? ? A . n
A 1 14 ARG 14 -6 ? ? ? A . n
A 1 15 GLU 15 -5 ? ? ? A . n
A 1 16 ASN 16 -4 ? ? ? A . n
A 1 17 LEU 17 -3 ? ? ? A . n
A 1 18 TYR 18 -2 ? ? ? A . n
A 1 19 PHE 19 -1 -1 PHE PHE A . n
A 1 20 GLN 20 0 0 GLN GLN A . n
A 1 21 GLY 21 1 1 GLY GLY A . n
A 1 22 ALA 22 2 2 ALA ALA A . n
A 1 23 LEU 23 3 3 LEU LEU A . n
A 1 24 LYS 24 4 4 LYS LYS A . n
A 1 25 ARG 25 5 5 ARG ARG A . n
A 1 26 ILE 26 6 6 ILE ILE A . n
A 1 27 ASN 27 7 7 ASN ASN A . n
A 1 28 LYS 28 8 8 LYS LYS A . n
A 1 29 GLU 29 9 9 GLU GLU A . n
A 1 30 LEU 30 10 10 LEU LEU A . n
A 1 31 ASN 31 11 11 ASN ASN A . n
A 1 32 ASP 32 12 12 ASP ASP A . n
A 1 33 LEU 33 13 13 LEU LEU A . n
A 1 34 SER 34 14 14 SER SER A . n
A 1 35 LYS 35 15 15 LYS LYS A . n
A 1 36 ASP 36 16 16 ASP ASP A . n
A 1 37 PRO 37 17 17 PRO PRO A . n
A 1 38 PRO 38 18 18 PRO PRO A . n
A 1 39 THR 39 19 19 THR THR A . n
A 1 40 ASN 40 20 20 ASN ASN A . n
A 1 41 CYS 41 21 21 CYS CYS A . n
A 1 42 SER 42 22 22 SER SER A . n
A 1 43 ALA 43 23 23 ALA ALA A . n
A 1 44 GLY 44 24 24 GLY GLY A . n
A 1 45 PRO 45 25 25 PRO PRO A . n
A 1 46 VAL 46 26 26 VAL VAL A . n
A 1 47 GLY 47 27 27 GLY GLY A . n
A 1 48 ASP 48 28 28 ASP ASP A . n
A 1 49 ASP 49 29 29 ASP ASP A . n
A 1 50 MET 50 30 30 MET MET A . n
A 1 51 PHE 51 31 31 PHE PHE A . n
A 1 52 HIS 52 32 32 HIS HIS A . n
A 1 53 TRP 53 33 33 TRP TRP A . n
A 1 54 GLN 54 34 34 GLN GLN A . n
A 1 55 ALA 55 35 35 ALA ALA A . n
A 1 56 THR 56 36 36 THR THR A . n
A 1 57 ILE 57 37 37 ILE ILE A . n
A 1 58 MET 58 38 38 MET MET A . n
A 1 59 GLY 59 39 39 GLY GLY A . n
A 1 60 PRO 60 40 40 PRO PRO A . n
A 1 61 GLU 61 41 41 GLU GLU A . n
A 1 62 ASP 62 42 42 ASP ASP A . n
A 1 63 SER 63 43 43 SER SER A . n
A 1 64 PRO 64 44 44 PRO PRO A . n
A 1 65 TYR 65 45 45 TYR TYR A . n
A 1 66 SER 66 46 46 SER SER A . n
A 1 67 GLY 67 47 47 GLY GLY A . n
A 1 68 GLY 68 48 48 GLY GLY A . n
A 1 69 VAL 69 49 49 VAL VAL A . n
A 1 70 PHE 70 50 50 PHE PHE A . n
A 1 71 PHE 71 51 51 PHE PHE A . n
A 1 72 LEU 72 52 52 LEU LEU A . n
A 1 73 ASN 73 53 53 ASN ASN A . n
A 1 74 ILE 74 54 54 ILE ILE A . n
A 1 75 HIS 75 55 55 HIS HIS A . n
A 1 76 PHE 76 56 56 PHE PHE A . n
A 1 77 PRO 77 57 57 PRO PRO A . n
A 1 78 SER 78 58 58 SER SER A . n
A 1 79 ASP 79 59 59 ASP ASP A . n
A 1 80 TYR 80 60 60 TYR TYR A . n
A 1 81 PRO 81 61 61 PRO PRO A . n
A 1 82 PHE 82 62 62 PHE PHE A . n
A 1 83 LYS 83 63 63 LYS LYS A . n
A 1 84 PRO 84 64 64 PRO PRO A . n
A 1 85 PRO 85 65 65 PRO PRO A . n
A 1 86 LYS 86 66 66 LYS LYS A . n
A 1 87 VAL 87 67 67 VAL VAL A . n
A 1 88 ASN 88 68 68 ASN ASN A . n
A 1 89 PHE 89 69 69 PHE PHE A . n
A 1 90 THR 90 70 70 THR THR A . n
A 1 91 THR 91 71 71 THR THR A . n
A 1 92 LYS 92 72 72 LYS LYS A . n
A 1 93 ILE 93 73 73 ILE ILE A . n
A 1 94 TYR 94 74 74 TYR TYR A . n
A 1 95 HIS 95 75 75 HIS HIS A . n
A 1 96 PRO 96 76 76 PRO PRO A . n
A 1 97 ASN 97 77 77 ASN ASN A . n
A 1 98 ILE 98 78 78 ILE ILE A . n
A 1 99 ASN 99 79 79 ASN ASN A . n
A 1 100 SER 100 80 80 SER SER A . n
A 1 101 GLN 101 81 81 GLN GLN A . n
A 1 102 GLY 102 82 82 GLY GLY A . n
A 1 103 ALA 103 83 83 ALA ALA A . n
A 1 104 ILE 104 84 84 ILE ILE A . n
A 1 105 CYS 105 85 85 CYS CYS A . n
A 1 106 LEU 106 86 86 LEU LEU A . n
A 1 107 ASP 107 87 87 ASP ASP A . n
A 1 108 ILE 108 88 88 ILE ILE A . n
A 1 109 LEU 109 89 89 LEU LEU A . n
A 1 110 LYS 110 90 90 LYS LYS A . n
A 1 111 ASP 111 91 91 ASP ASP A . n
A 1 112 GLN 112 92 92 GLN GLN A . n
A 1 113 TRP 113 93 93 TRP TRP A . n
A 1 114 SER 114 94 94 SER SER A . n
A 1 115 PRO 115 95 95 PRO PRO A . n
A 1 116 ALA 116 96 96 ALA ALA A . n
A 1 117 LEU 117 97 97 LEU LEU A . n
A 1 118 THR 118 98 98 THR THR A . n
A 1 119 ILE 119 99 99 ILE ILE A . n
A 1 120 SER 120 100 100 SER SER A . n
A 1 121 LYS 121 101 101 LYS LYS A . n
A 1 122 VAL 122 102 102 VAL VAL A . n
A 1 123 LEU 123 103 103 LEU LEU A . n
A 1 124 LEU 124 104 104 LEU LEU A . n
A 1 125 SER 125 105 105 SER SER A . n
A 1 126 ILE 126 106 106 ILE ILE A . n
A 1 127 SER 127 107 107 SER SER A . n
A 1 128 SER 128 108 108 SER SER A . n
A 1 129 LEU 129 109 109 LEU LEU A . n
A 1 130 LEU 130 110 110 LEU LEU A . n
A 1 131 THR 131 111 111 THR THR A . n
A 1 132 ASP 132 112 112 ASP ASP A . n
A 1 133 PRO 133 113 113 PRO PRO A . n
A 1 134 ASN 134 114 114 ASN ASN A . n
A 1 135 PRO 135 115 115 PRO PRO A . n
A 1 136 ASP 136 116 116 ASP ASP A . n
A 1 137 ASP 137 117 117 ASP ASP A . n
A 1 138 PRO 138 118 118 PRO PRO A . n
A 1 139 LEU 139 119 119 LEU LEU A . n
A 1 140 VAL 140 120 120 VAL VAL A . n
A 1 141 PRO 141 121 121 PRO PRO A . n
A 1 142 GLU 142 122 122 GLU GLU A . n
A 1 143 ILE 143 123 123 ILE ILE A . n
A 1 144 ALA 144 124 124 ALA ALA A . n
A 1 145 HIS 145 125 125 HIS HIS A . n
A 1 146 LEU 146 126 126 LEU LEU A . n
A 1 147 TYR 147 127 127 TYR TYR A . n
A 1 148 LYS 148 128 128 LYS LYS A . n
A 1 149 SER 149 129 129 SER SER A . n
A 1 150 ASP 150 130 130 ASP ASP A . n
A 1 151 ARG 151 131 131 ARG ARG A . n
A 1 152 MET 152 132 132 MET MET A . n
A 1 153 ARG 153 133 133 ARG ARG A . n
A 1 154 TYR 154 134 134 TYR TYR A . n
A 1 155 ASP 155 135 135 ASP ASP A . n
A 1 156 GLN 156 136 136 GLN GLN A . n
A 1 157 THR 157 137 137 THR THR A . n
A 1 158 ALA 158 138 138 ALA ALA A . n
A 1 159 ARG 159 139 139 ARG ARG A . n
A 1 160 GLU 160 140 140 GLU GLU A . n
A 1 161 TRP 161 141 141 TRP TRP A . n
A 1 162 SER 162 142 142 SER SER A . n
A 1 163 GLN 163 143 143 GLN GLN A . n
A 1 164 LYS 164 144 144 LYS LYS A . n
A 1 165 TYR 165 145 145 TYR TYR A . n
A 1 166 ALA 166 146 146 ALA ALA A . n
#
_pdbx_SG_project.id 1
_pdbx_SG_project.project_name ?
_pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium'
_pdbx_SG_project.initial_of_center SGC
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 UNX 1 147 21 UNX UNX A .
C 2 UNX 1 148 22 UNX UNX A .
D 2 UNX 1 149 23 UNX UNX A .
E 2 UNX 1 150 24 UNX UNX A .
F 2 UNX 1 151 25 UNX UNX A .
G 2 UNX 1 152 26 UNX UNX A .
H 2 UNX 1 153 27 UNX UNX A .
I 2 UNX 1 154 28 UNX UNX A .
J 2 UNX 1 155 29 UNX UNX A .
K 2 UNX 1 156 30 UNX UNX A .
L 3 HOH 1 157 1 HOH HOH A .
L 3 HOH 2 158 2 HOH HOH A .
L 3 HOH 3 159 3 HOH HOH A .
L 3 HOH 4 160 4 HOH HOH A .
L 3 HOH 5 161 5 HOH HOH A .
L 3 HOH 6 162 6 HOH HOH A .
L 3 HOH 7 163 7 HOH HOH A .
L 3 HOH 8 164 8 HOH HOH A .
L 3 HOH 9 165 9 HOH HOH A .
L 3 HOH 10 166 10 HOH HOH A .
L 3 HOH 11 167 11 HOH HOH A .
L 3 HOH 12 168 12 HOH HOH A .
L 3 HOH 13 169 13 HOH HOH A .
L 3 HOH 14 170 14 HOH HOH A .
L 3 HOH 15 171 15 HOH HOH A .
L 3 HOH 16 172 16 HOH HOH A .
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2005-09-20
2 'Structure model' 1 1 2008-05-01
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2017-10-11
5 'Structure model' 1 4 2023-08-23
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' Advisory
3 3 'Structure model' 'Version format compliance'
4 4 'Structure model' 'Refinement description'
5 5 'Structure model' 'Data collection'
6 5 'Structure model' 'Database references'
7 5 'Structure model' 'Derived calculations'
8 5 'Structure model' 'Refinement description'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' software
2 5 'Structure model' chem_comp_atom
3 5 'Structure model' chem_comp_bond
4 5 'Structure model' database_2
5 5 'Structure model' pdbx_initial_refinement_model
6 5 'Structure model' struct_site
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_software.classification'
2 4 'Structure model' '_software.contact_author'
3 4 'Structure model' '_software.contact_author_email'
4 4 'Structure model' '_software.date'
5 4 'Structure model' '_software.language'
6 4 'Structure model' '_software.location'
7 4 'Structure model' '_software.name'
8 4 'Structure model' '_software.type'
9 4 'Structure model' '_software.version'
10 5 'Structure model' '_database_2.pdbx_DOI'
11 5 'Structure model' '_database_2.pdbx_database_accession'
12 5 'Structure model' '_struct_site.pdbx_auth_asym_id'
13 5 'Structure model' '_struct_site.pdbx_auth_comp_id'
14 5 'Structure model' '_struct_site.pdbx_auth_seq_id'
#
_pdbx_refine_tls.id 1
_pdbx_refine_tls.details .
_pdbx_refine_tls.method refined
_pdbx_refine_tls.origin_x 21.7452
_pdbx_refine_tls.origin_y 69.7416
_pdbx_refine_tls.origin_z 76.6636
_pdbx_refine_tls.T[1][1] -0.1077
_pdbx_refine_tls.T[2][2] -0.1769
_pdbx_refine_tls.T[3][3] -0.1830
_pdbx_refine_tls.T[1][2] -0.1219
_pdbx_refine_tls.T[1][3] 0.0981
_pdbx_refine_tls.T[2][3] -0.1497
_pdbx_refine_tls.L[1][1] 4.1505
_pdbx_refine_tls.L[2][2] 4.1878
_pdbx_refine_tls.L[3][3] 5.2692
_pdbx_refine_tls.L[1][2] -2.1059
_pdbx_refine_tls.L[1][3] -2.2984
_pdbx_refine_tls.L[2][3] 4.0579
_pdbx_refine_tls.S[1][1] -0.4043
_pdbx_refine_tls.S[2][2] -0.3192
_pdbx_refine_tls.S[3][3] 0.7234
_pdbx_refine_tls.S[1][2] 0.4837
_pdbx_refine_tls.S[1][3] -0.5425
_pdbx_refine_tls.S[2][3] 0.6788
_pdbx_refine_tls.S[2][1] 0.1864
_pdbx_refine_tls.S[3][1] 0.3349
_pdbx_refine_tls.S[3][2] -0.7749
_pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_pdbx_refine_tls_group.id 1
_pdbx_refine_tls_group.refine_tls_id 1
_pdbx_refine_tls_group.beg_label_asym_id A
_pdbx_refine_tls_group.beg_label_seq_id 19
_pdbx_refine_tls_group.end_label_asym_id A
_pdbx_refine_tls_group.end_label_seq_id 166
_pdbx_refine_tls_group.selection ALL
_pdbx_refine_tls_group.beg_auth_asym_id A
_pdbx_refine_tls_group.beg_auth_seq_id -1
_pdbx_refine_tls_group.end_auth_asym_id A
_pdbx_refine_tls_group.end_auth_seq_id 146
_pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION'
_pdbx_refine_tls_group.selection_details ?
#
_pdbx_phasing_MR.entry_id 2AYV
_pdbx_phasing_MR.method_rotation ?
_pdbx_phasing_MR.method_translation ?
_pdbx_phasing_MR.model_details ?
_pdbx_phasing_MR.R_factor 0.450
_pdbx_phasing_MR.R_rigid_body ?
_pdbx_phasing_MR.correlation_coeff_Fo_to_Fc 0.578
_pdbx_phasing_MR.correlation_coeff_Io_to_Ic ?
_pdbx_phasing_MR.d_res_high_rotation ?
_pdbx_phasing_MR.d_res_low_rotation ?
_pdbx_phasing_MR.d_res_high_translation 4.000
_pdbx_phasing_MR.d_res_low_translation 15.000
_pdbx_phasing_MR.packing ?
_pdbx_phasing_MR.reflns_percent_rotation ?
_pdbx_phasing_MR.reflns_percent_translation ?
_pdbx_phasing_MR.sigma_F_rotation ?
_pdbx_phasing_MR.sigma_F_translation ?
_pdbx_phasing_MR.sigma_I_rotation ?
_pdbx_phasing_MR.sigma_I_translation ?
#
_phasing.method mr
#
loop_
_software.name
_software.version
_software.date
_software.type
_software.contact_author
_software.contact_author_email
_software.classification
_software.location
_software.language
_software.citation_id
_software.pdbx_ordinal
DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction'
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1
SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling'
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2
EPMR 2.5 'Feb 2 2001' program 'Charles R' crk@agouron.com phasing
http://www.msg.ucsf.edu/local/programs/epmr/epmr.html ? ? 3
REFMAC refmac_5.2.0005 24/04/2001 program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement
http://www.ccp4.ac.uk/main.html Fortran ? 4
PDB_EXTRACT 1.700 'Jul. 11, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction'
http://pdb.rutgers.edu/software/ C++ ? 5
#
_pdbx_database_remark.id 42
_pdbx_database_remark.text
;MOLPROBITY STRUCTURE VALIDATION
PROGRAMS : MOLPROBITY (KING, REDUCE, AND PROBE)
AUTHORS : I.W.DAVIS,J.M.WORD
URL : HTTP://KINEMAGE.BIOCHEM.DUKE.EDU/MOLPROBITY/
AUTHORS : J.S.RICHARDSON,W.B.ARENDALL,D.C.RICHARDSON
REFERENCE : NEW TOOLS AND DATA FOR IMPROVING
: STRUCTURES, USING ALL-ATOM CONTACTS
: METHODS IN ENZYMOLOGY. 2003;374:385-412.
MOLPROBITY OUTPUT SCORES:
ALL-ATOM CLASHSCORE : 7.37 (7.62 B<40)
BAD ROTAMERS : 3.4% 4/119 (TARGET 0-1%)
RAMACHANDRAN OUTLIERS : 0.0% 0/146 (TARGET 0.2%)
RAMACHANDRAN FAVORED : 97.3% 142/146 (TARGET 98.0%)
;
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 ASP A 42 ? ? -86.72 47.65
2 1 LYS A 90 ? ? -127.22 -123.19
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 Y 1 A GLN 0 ? CG ? A GLN 20 CG
2 1 Y 1 A GLN 0 ? CD ? A GLN 20 CD
3 1 Y 1 A GLN 0 ? OE1 ? A GLN 20 OE1
4 1 Y 1 A GLN 0 ? NE2 ? A GLN 20 NE2
5 1 Y 1 A LEU 3 ? CG ? A LEU 23 CG
6 1 Y 1 A LEU 3 ? CD1 ? A LEU 23 CD1
7 1 Y 1 A LEU 3 ? CD2 ? A LEU 23 CD2
8 1 Y 1 A LYS 4 ? CG ? A LYS 24 CG
9 1 Y 1 A LYS 4 ? CD ? A LYS 24 CD
10 1 Y 1 A LYS 4 ? CE ? A LYS 24 CE
11 1 Y 1 A LYS 4 ? NZ ? A LYS 24 NZ
12 1 Y 1 A LYS 8 ? CD ? A LYS 28 CD
13 1 Y 1 A LYS 8 ? CE ? A LYS 28 CE
14 1 Y 1 A LYS 8 ? NZ ? A LYS 28 NZ
15 1 Y 1 A LEU 10 ? CG ? A LEU 30 CG
16 1 Y 1 A LEU 10 ? CD1 ? A LEU 30 CD1
17 1 Y 1 A LEU 10 ? CD2 ? A LEU 30 CD2
18 1 Y 1 A ASN 11 ? CG ? A ASN 31 CG
19 1 Y 1 A ASN 11 ? OD1 ? A ASN 31 OD1
20 1 Y 1 A ASN 11 ? ND2 ? A ASN 31 ND2
21 1 Y 1 A LEU 13 ? CD1 ? A LEU 33 CD1
22 1 Y 1 A LEU 13 ? CD2 ? A LEU 33 CD2
23 1 Y 1 A LYS 15 ? CD ? A LYS 35 CD
24 1 Y 1 A LYS 15 ? CE ? A LYS 35 CE
25 1 Y 1 A LYS 15 ? NZ ? A LYS 35 NZ
26 1 Y 1 A ASP 28 ? CG ? A ASP 48 CG
27 1 Y 1 A ASP 28 ? OD1 ? A ASP 48 OD1
28 1 Y 1 A ASP 28 ? OD2 ? A ASP 48 OD2
29 1 Y 1 A GLU 41 ? CD ? A GLU 61 CD
30 1 Y 1 A GLU 41 ? OE1 ? A GLU 61 OE1
31 1 Y 1 A GLU 41 ? OE2 ? A GLU 61 OE2
32 1 Y 1 A LYS 66 ? CD ? A LYS 86 CD
33 1 Y 1 A LYS 66 ? CE ? A LYS 86 CE
34 1 Y 1 A LYS 66 ? NZ ? A LYS 86 NZ
35 1 Y 1 A LYS 128 ? CD ? A LYS 148 CD
36 1 Y 1 A LYS 128 ? CE ? A LYS 148 CE
37 1 Y 1 A LYS 128 ? NZ ? A LYS 148 NZ
38 1 Y 1 A ARG 133 ? CG ? A ARG 153 CG
39 1 Y 1 A ARG 133 ? CD ? A ARG 153 CD
40 1 Y 1 A ARG 133 ? NE ? A ARG 153 NE
41 1 Y 1 A ARG 133 ? CZ ? A ARG 153 CZ
42 1 Y 1 A ARG 133 ? NH1 ? A ARG 153 NH1
43 1 Y 1 A ARG 133 ? NH2 ? A ARG 153 NH2
44 1 Y 1 A LYS 144 ? CG ? A LYS 164 CG
45 1 Y 1 A LYS 144 ? CD ? A LYS 164 CD
46 1 Y 1 A LYS 144 ? CE ? A LYS 164 CE
47 1 Y 1 A LYS 144 ? NZ ? A LYS 164 NZ
#
loop_
_pdbx_unobs_or_zero_occ_residues.id
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.polymer_flag
_pdbx_unobs_or_zero_occ_residues.occupancy_flag
_pdbx_unobs_or_zero_occ_residues.auth_asym_id
_pdbx_unobs_or_zero_occ_residues.auth_comp_id
_pdbx_unobs_or_zero_occ_residues.auth_seq_id
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code
_pdbx_unobs_or_zero_occ_residues.label_asym_id
_pdbx_unobs_or_zero_occ_residues.label_comp_id
_pdbx_unobs_or_zero_occ_residues.label_seq_id
1 1 Y 1 A MET -19 ? A MET 1
2 1 Y 1 A GLY -18 ? A GLY 2
3 1 Y 1 A SER -17 ? A SER 3
4 1 Y 1 A SER -16 ? A SER 4
5 1 Y 1 A HIS -15 ? A HIS 5
6 1 Y 1 A HIS -14 ? A HIS 6
7 1 Y 1 A HIS -13 ? A HIS 7
8 1 Y 1 A HIS -12 ? A HIS 8
9 1 Y 1 A HIS -11 ? A HIS 9
10 1 Y 1 A HIS -10 ? A HIS 10
11 1 Y 1 A SER -9 ? A SER 11
12 1 Y 1 A SER -8 ? A SER 12
13 1 Y 1 A GLY -7 ? A GLY 13
14 1 Y 1 A ARG -6 ? A ARG 14
15 1 Y 1 A GLU -5 ? A GLU 15
16 1 Y 1 A ASN -4 ? A ASN 16
17 1 Y 1 A LEU -3 ? A LEU 17
18 1 Y 1 A TYR -2 ? A TYR 18
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
ARG N N N N 14
ARG CA C N S 15
ARG C C N N 16
ARG O O N N 17
ARG CB C N N 18
ARG CG C N N 19
ARG CD C N N 20
ARG NE N N N 21
ARG CZ C N N 22
ARG NH1 N N N 23
ARG NH2 N N N 24
ARG OXT O N N 25
ARG H H N N 26
ARG H2 H N N 27
ARG HA H N N 28
ARG HB2 H N N 29
ARG HB3 H N N 30
ARG HG2 H N N 31
ARG HG3 H N N 32
ARG HD2 H N N 33
ARG HD3 H N N 34
ARG HE H N N 35
ARG HH11 H N N 36
ARG HH12 H N N 37
ARG HH21 H N N 38
ARG HH22 H N N 39
ARG HXT H N N 40
ASN N N N N 41
ASN CA C N S 42
ASN C C N N 43
ASN O O N N 44
ASN CB C N N 45
ASN CG C N N 46
ASN OD1 O N N 47
ASN ND2 N N N 48
ASN OXT O N N 49
ASN H H N N 50
ASN H2 H N N 51
ASN HA H N N 52
ASN HB2 H N N 53
ASN HB3 H N N 54
ASN HD21 H N N 55
ASN HD22 H N N 56
ASN HXT H N N 57
ASP N N N N 58
ASP CA C N S 59
ASP C C N N 60
ASP O O N N 61
ASP CB C N N 62
ASP CG C N N 63
ASP OD1 O N N 64
ASP OD2 O N N 65
ASP OXT O N N 66
ASP H H N N 67
ASP H2 H N N 68
ASP HA H N N 69
ASP HB2 H N N 70
ASP HB3 H N N 71
ASP HD2 H N N 72
ASP HXT H N N 73
CYS N N N N 74
CYS CA C N R 75
CYS C C N N 76
CYS O O N N 77
CYS CB C N N 78
CYS SG S N N 79
CYS OXT O N N 80
CYS H H N N 81
CYS H2 H N N 82
CYS HA H N N 83
CYS HB2 H N N 84
CYS HB3 H N N 85
CYS HG H N N 86
CYS HXT H N N 87
GLN N N N N 88
GLN CA C N S 89
GLN C C N N 90
GLN O O N N 91
GLN CB C N N 92
GLN CG C N N 93
GLN CD C N N 94
GLN OE1 O N N 95
GLN NE2 N N N 96
GLN OXT O N N 97
GLN H H N N 98
GLN H2 H N N 99
GLN HA H N N 100
GLN HB2 H N N 101
GLN HB3 H N N 102
GLN HG2 H N N 103
GLN HG3 H N N 104
GLN HE21 H N N 105
GLN HE22 H N N 106
GLN HXT H N N 107
GLU N N N N 108
GLU CA C N S 109
GLU C C N N 110
GLU O O N N 111
GLU CB C N N 112
GLU CG C N N 113
GLU CD C N N 114
GLU OE1 O N N 115
GLU OE2 O N N 116
GLU OXT O N N 117
GLU H H N N 118
GLU H2 H N N 119
GLU HA H N N 120
GLU HB2 H N N 121
GLU HB3 H N N 122
GLU HG2 H N N 123
GLU HG3 H N N 124
GLU HE2 H N N 125
GLU HXT H N N 126
GLY N N N N 127
GLY CA C N N 128
GLY C C N N 129
GLY O O N N 130
GLY OXT O N N 131
GLY H H N N 132
GLY H2 H N N 133
GLY HA2 H N N 134
GLY HA3 H N N 135
GLY HXT H N N 136
HIS N N N N 137
HIS CA C N S 138
HIS C C N N 139
HIS O O N N 140
HIS CB C N N 141
HIS CG C Y N 142
HIS ND1 N Y N 143
HIS CD2 C Y N 144
HIS CE1 C Y N 145
HIS NE2 N Y N 146
HIS OXT O N N 147
HIS H H N N 148
HIS H2 H N N 149
HIS HA H N N 150
HIS HB2 H N N 151
HIS HB3 H N N 152
HIS HD1 H N N 153
HIS HD2 H N N 154
HIS HE1 H N N 155
HIS HE2 H N N 156
HIS HXT H N N 157
HOH O O N N 158
HOH H1 H N N 159
HOH H2 H N N 160
ILE N N N N 161
ILE CA C N S 162
ILE C C N N 163
ILE O O N N 164
ILE CB C N S 165
ILE CG1 C N N 166
ILE CG2 C N N 167
ILE CD1 C N N 168
ILE OXT O N N 169
ILE H H N N 170
ILE H2 H N N 171
ILE HA H N N 172
ILE HB H N N 173
ILE HG12 H N N 174
ILE HG13 H N N 175
ILE HG21 H N N 176
ILE HG22 H N N 177
ILE HG23 H N N 178
ILE HD11 H N N 179
ILE HD12 H N N 180
ILE HD13 H N N 181
ILE HXT H N N 182
LEU N N N N 183
LEU CA C N S 184
LEU C C N N 185
LEU O O N N 186
LEU CB C N N 187
LEU CG C N N 188
LEU CD1 C N N 189
LEU CD2 C N N 190
LEU OXT O N N 191
LEU H H N N 192
LEU H2 H N N 193
LEU HA H N N 194
LEU HB2 H N N 195
LEU HB3 H N N 196
LEU HG H N N 197
LEU HD11 H N N 198
LEU HD12 H N N 199
LEU HD13 H N N 200
LEU HD21 H N N 201
LEU HD22 H N N 202
LEU HD23 H N N 203
LEU HXT H N N 204
LYS N N N N 205
LYS CA C N S 206
LYS C C N N 207
LYS O O N N 208
LYS CB C N N 209
LYS CG C N N 210
LYS CD C N N 211
LYS CE C N N 212
LYS NZ N N N 213
LYS OXT O N N 214
LYS H H N N 215
LYS H2 H N N 216
LYS HA H N N 217
LYS HB2 H N N 218
LYS HB3 H N N 219
LYS HG2 H N N 220
LYS HG3 H N N 221
LYS HD2 H N N 222
LYS HD3 H N N 223
LYS HE2 H N N 224
LYS HE3 H N N 225
LYS HZ1 H N N 226
LYS HZ2 H N N 227
LYS HZ3 H N N 228
LYS HXT H N N 229
MET N N N N 230
MET CA C N S 231
MET C C N N 232
MET O O N N 233
MET CB C N N 234
MET CG C N N 235
MET SD S N N 236
MET CE C N N 237
MET OXT O N N 238
MET H H N N 239
MET H2 H N N 240
MET HA H N N 241
MET HB2 H N N 242
MET HB3 H N N 243
MET HG2 H N N 244
MET HG3 H N N 245
MET HE1 H N N 246
MET HE2 H N N 247
MET HE3 H N N 248
MET HXT H N N 249
PHE N N N N 250
PHE CA C N S 251
PHE C C N N 252
PHE O O N N 253
PHE CB C N N 254
PHE CG C Y N 255
PHE CD1 C Y N 256
PHE CD2 C Y N 257
PHE CE1 C Y N 258
PHE CE2 C Y N 259
PHE CZ C Y N 260
PHE OXT O N N 261
PHE H H N N 262
PHE H2 H N N 263
PHE HA H N N 264
PHE HB2 H N N 265
PHE HB3 H N N 266
PHE HD1 H N N 267
PHE HD2 H N N 268
PHE HE1 H N N 269
PHE HE2 H N N 270
PHE HZ H N N 271
PHE HXT H N N 272
PRO N N N N 273
PRO CA C N S 274
PRO C C N N 275
PRO O O N N 276
PRO CB C N N 277
PRO CG C N N 278
PRO CD C N N 279
PRO OXT O N N 280
PRO H H N N 281
PRO HA H N N 282
PRO HB2 H N N 283
PRO HB3 H N N 284
PRO HG2 H N N 285
PRO HG3 H N N 286
PRO HD2 H N N 287
PRO HD3 H N N 288
PRO HXT H N N 289
SER N N N N 290
SER CA C N S 291
SER C C N N 292
SER O O N N 293
SER CB C N N 294
SER OG O N N 295
SER OXT O N N 296
SER H H N N 297
SER H2 H N N 298
SER HA H N N 299
SER HB2 H N N 300
SER HB3 H N N 301
SER HG H N N 302
SER HXT H N N 303
THR N N N N 304
THR CA C N S 305
THR C C N N 306
THR O O N N 307
THR CB C N R 308
THR OG1 O N N 309
THR CG2 C N N 310
THR OXT O N N 311
THR H H N N 312
THR H2 H N N 313
THR HA H N N 314
THR HB H N N 315
THR HG1 H N N 316
THR HG21 H N N 317
THR HG22 H N N 318
THR HG23 H N N 319
THR HXT H N N 320
TRP N N N N 321
TRP CA C N S 322
TRP C C N N 323
TRP O O N N 324
TRP CB C N N 325
TRP CG C Y N 326
TRP CD1 C Y N 327
TRP CD2 C Y N 328
TRP NE1 N Y N 329
TRP CE2 C Y N 330
TRP CE3 C Y N 331
TRP CZ2 C Y N 332
TRP CZ3 C Y N 333
TRP CH2 C Y N 334
TRP OXT O N N 335
TRP H H N N 336
TRP H2 H N N 337
TRP HA H N N 338
TRP HB2 H N N 339
TRP HB3 H N N 340
TRP HD1 H N N 341
TRP HE1 H N N 342
TRP HE3 H N N 343
TRP HZ2 H N N 344
TRP HZ3 H N N 345
TRP HH2 H N N 346
TRP HXT H N N 347
TYR N N N N 348
TYR CA C N S 349
TYR C C N N 350
TYR O O N N 351
TYR CB C N N 352
TYR CG C Y N 353
TYR CD1 C Y N 354
TYR CD2 C Y N 355
TYR CE1 C Y N 356
TYR CE2 C Y N 357
TYR CZ C Y N 358
TYR OH O N N 359
TYR OXT O N N 360
TYR H H N N 361
TYR H2 H N N 362
TYR HA H N N 363
TYR HB2 H N N 364
TYR HB3 H N N 365
TYR HD1 H N N 366
TYR HD2 H N N 367
TYR HE1 H N N 368
TYR HE2 H N N 369
TYR HH H N N 370
TYR HXT H N N 371
VAL N N N N 372
VAL CA C N S 373
VAL C C N N 374
VAL O O N N 375
VAL CB C N N 376
VAL CG1 C N N 377
VAL CG2 C N N 378
VAL OXT O N N 379
VAL H H N N 380
VAL H2 H N N 381
VAL HA H N N 382
VAL HB H N N 383
VAL HG11 H N N 384
VAL HG12 H N N 385
VAL HG13 H N N 386
VAL HG21 H N N 387
VAL HG22 H N N 388
VAL HG23 H N N 389
VAL HXT H N N 390
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
ARG N CA sing N N 13
ARG N H sing N N 14
ARG N H2 sing N N 15
ARG CA C sing N N 16
ARG CA CB sing N N 17
ARG CA HA sing N N 18
ARG C O doub N N 19
ARG C OXT sing N N 20
ARG CB CG sing N N 21
ARG CB HB2 sing N N 22
ARG CB HB3 sing N N 23
ARG CG CD sing N N 24
ARG CG HG2 sing N N 25
ARG CG HG3 sing N N 26
ARG CD NE sing N N 27
ARG CD HD2 sing N N 28
ARG CD HD3 sing N N 29
ARG NE CZ sing N N 30
ARG NE HE sing N N 31
ARG CZ NH1 sing N N 32
ARG CZ NH2 doub N N 33
ARG NH1 HH11 sing N N 34
ARG NH1 HH12 sing N N 35
ARG NH2 HH21 sing N N 36
ARG NH2 HH22 sing N N 37
ARG OXT HXT sing N N 38
ASN N CA sing N N 39
ASN N H sing N N 40
ASN N H2 sing N N 41
ASN CA C sing N N 42
ASN CA CB sing N N 43
ASN CA HA sing N N 44
ASN C O doub N N 45
ASN C OXT sing N N 46
ASN CB CG sing N N 47
ASN CB HB2 sing N N 48
ASN CB HB3 sing N N 49
ASN CG OD1 doub N N 50
ASN CG ND2 sing N N 51
ASN ND2 HD21 sing N N 52
ASN ND2 HD22 sing N N 53
ASN OXT HXT sing N N 54
ASP N CA sing N N 55
ASP N H sing N N 56
ASP N H2 sing N N 57
ASP CA C sing N N 58
ASP CA CB sing N N 59
ASP CA HA sing N N 60
ASP C O doub N N 61
ASP C OXT sing N N 62
ASP CB CG sing N N 63
ASP CB HB2 sing N N 64
ASP CB HB3 sing N N 65
ASP CG OD1 doub N N 66
ASP CG OD2 sing N N 67
ASP OD2 HD2 sing N N 68
ASP OXT HXT sing N N 69
CYS N CA sing N N 70
CYS N H sing N N 71
CYS N H2 sing N N 72
CYS CA C sing N N 73
CYS CA CB sing N N 74
CYS CA HA sing N N 75
CYS C O doub N N 76
CYS C OXT sing N N 77
CYS CB SG sing N N 78
CYS CB HB2 sing N N 79
CYS CB HB3 sing N N 80
CYS SG HG sing N N 81
CYS OXT HXT sing N N 82
GLN N CA sing N N 83
GLN N H sing N N 84
GLN N H2 sing N N 85
GLN CA C sing N N 86
GLN CA CB sing N N 87
GLN CA HA sing N N 88
GLN C O doub N N 89
GLN C OXT sing N N 90
GLN CB CG sing N N 91
GLN CB HB2 sing N N 92
GLN CB HB3 sing N N 93
GLN CG CD sing N N 94
GLN CG HG2 sing N N 95
GLN CG HG3 sing N N 96
GLN CD OE1 doub N N 97
GLN CD NE2 sing N N 98
GLN NE2 HE21 sing N N 99
GLN NE2 HE22 sing N N 100
GLN OXT HXT sing N N 101
GLU N CA sing N N 102
GLU N H sing N N 103
GLU N H2 sing N N 104
GLU CA C sing N N 105
GLU CA CB sing N N 106
GLU CA HA sing N N 107
GLU C O doub N N 108
GLU C OXT sing N N 109
GLU CB CG sing N N 110
GLU CB HB2 sing N N 111
GLU CB HB3 sing N N 112
GLU CG CD sing N N 113
GLU CG HG2 sing N N 114
GLU CG HG3 sing N N 115
GLU CD OE1 doub N N 116
GLU CD OE2 sing N N 117
GLU OE2 HE2 sing N N 118
GLU OXT HXT sing N N 119
GLY N CA sing N N 120
GLY N H sing N N 121
GLY N H2 sing N N 122
GLY CA C sing N N 123
GLY CA HA2 sing N N 124
GLY CA HA3 sing N N 125
GLY C O doub N N 126
GLY C OXT sing N N 127
GLY OXT HXT sing N N 128
HIS N CA sing N N 129
HIS N H sing N N 130
HIS N H2 sing N N 131
HIS CA C sing N N 132
HIS CA CB sing N N 133
HIS CA HA sing N N 134
HIS C O doub N N 135
HIS C OXT sing N N 136
HIS CB CG sing N N 137
HIS CB HB2 sing N N 138
HIS CB HB3 sing N N 139
HIS CG ND1 sing Y N 140
HIS CG CD2 doub Y N 141
HIS ND1 CE1 doub Y N 142
HIS ND1 HD1 sing N N 143
HIS CD2 NE2 sing Y N 144
HIS CD2 HD2 sing N N 145
HIS CE1 NE2 sing Y N 146
HIS CE1 HE1 sing N N 147
HIS NE2 HE2 sing N N 148
HIS OXT HXT sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
ILE N CA sing N N 152
ILE N H sing N N 153
ILE N H2 sing N N 154
ILE CA C sing N N 155
ILE CA CB sing N N 156
ILE CA HA sing N N 157
ILE C O doub N N 158
ILE C OXT sing N N 159
ILE CB CG1 sing N N 160
ILE CB CG2 sing N N 161
ILE CB HB sing N N 162
ILE CG1 CD1 sing N N 163
ILE CG1 HG12 sing N N 164
ILE CG1 HG13 sing N N 165
ILE CG2 HG21 sing N N 166
ILE CG2 HG22 sing N N 167
ILE CG2 HG23 sing N N 168
ILE CD1 HD11 sing N N 169
ILE CD1 HD12 sing N N 170
ILE CD1 HD13 sing N N 171
ILE OXT HXT sing N N 172
LEU N CA sing N N 173
LEU N H sing N N 174
LEU N H2 sing N N 175
LEU CA C sing N N 176
LEU CA CB sing N N 177
LEU CA HA sing N N 178
LEU C O doub N N 179
LEU C OXT sing N N 180
LEU CB CG sing N N 181
LEU CB HB2 sing N N 182
LEU CB HB3 sing N N 183
LEU CG CD1 sing N N 184
LEU CG CD2 sing N N 185
LEU CG HG sing N N 186
LEU CD1 HD11 sing N N 187
LEU CD1 HD12 sing N N 188
LEU CD1 HD13 sing N N 189
LEU CD2 HD21 sing N N 190
LEU CD2 HD22 sing N N 191
LEU CD2 HD23 sing N N 192
LEU OXT HXT sing N N 193
LYS N CA sing N N 194
LYS N H sing N N 195
LYS N H2 sing N N 196
LYS CA C sing N N 197
LYS CA CB sing N N 198
LYS CA HA sing N N 199
LYS C O doub N N 200
LYS C OXT sing N N 201
LYS CB CG sing N N 202
LYS CB HB2 sing N N 203
LYS CB HB3 sing N N 204
LYS CG CD sing N N 205
LYS CG HG2 sing N N 206
LYS CG HG3 sing N N 207
LYS CD CE sing N N 208
LYS CD HD2 sing N N 209
LYS CD HD3 sing N N 210
LYS CE NZ sing N N 211
LYS CE HE2 sing N N 212
LYS CE HE3 sing N N 213
LYS NZ HZ1 sing N N 214
LYS NZ HZ2 sing N N 215
LYS NZ HZ3 sing N N 216
LYS OXT HXT sing N N 217
MET N CA sing N N 218
MET N H sing N N 219
MET N H2 sing N N 220
MET CA C sing N N 221
MET CA CB sing N N 222
MET CA HA sing N N 223
MET C O doub N N 224
MET C OXT sing N N 225
MET CB CG sing N N 226
MET CB HB2 sing N N 227
MET CB HB3 sing N N 228
MET CG SD sing N N 229
MET CG HG2 sing N N 230
MET CG HG3 sing N N 231
MET SD CE sing N N 232
MET CE HE1 sing N N 233
MET CE HE2 sing N N 234
MET CE HE3 sing N N 235
MET OXT HXT sing N N 236
PHE N CA sing N N 237
PHE N H sing N N 238
PHE N H2 sing N N 239
PHE CA C sing N N 240
PHE CA CB sing N N 241
PHE CA HA sing N N 242
PHE C O doub N N 243
PHE C OXT sing N N 244
PHE CB CG sing N N 245
PHE CB HB2 sing N N 246
PHE CB HB3 sing N N 247
PHE CG CD1 doub Y N 248
PHE CG CD2 sing Y N 249
PHE CD1 CE1 sing Y N 250
PHE CD1 HD1 sing N N 251
PHE CD2 CE2 doub Y N 252
PHE CD2 HD2 sing N N 253
PHE CE1 CZ doub Y N 254
PHE CE1 HE1 sing N N 255
PHE CE2 CZ sing Y N 256
PHE CE2 HE2 sing N N 257
PHE CZ HZ sing N N 258
PHE OXT HXT sing N N 259
PRO N CA sing N N 260
PRO N CD sing N N 261
PRO N H sing N N 262
PRO CA C sing N N 263
PRO CA CB sing N N 264
PRO CA HA sing N N 265
PRO C O doub N N 266
PRO C OXT sing N N 267
PRO CB CG sing N N 268
PRO CB HB2 sing N N 269
PRO CB HB3 sing N N 270
PRO CG CD sing N N 271
PRO CG HG2 sing N N 272
PRO CG HG3 sing N N 273
PRO CD HD2 sing N N 274
PRO CD HD3 sing N N 275
PRO OXT HXT sing N N 276
SER N CA sing N N 277
SER N H sing N N 278
SER N H2 sing N N 279
SER CA C sing N N 280
SER CA CB sing N N 281
SER CA HA sing N N 282
SER C O doub N N 283
SER C OXT sing N N 284
SER CB OG sing N N 285
SER CB HB2 sing N N 286
SER CB HB3 sing N N 287
SER OG HG sing N N 288
SER OXT HXT sing N N 289
THR N CA sing N N 290
THR N H sing N N 291
THR N H2 sing N N 292
THR CA C sing N N 293
THR CA CB sing N N 294
THR CA HA sing N N 295
THR C O doub N N 296
THR C OXT sing N N 297
THR CB OG1 sing N N 298
THR CB CG2 sing N N 299
THR CB HB sing N N 300
THR OG1 HG1 sing N N 301
THR CG2 HG21 sing N N 302
THR CG2 HG22 sing N N 303
THR CG2 HG23 sing N N 304
THR OXT HXT sing N N 305
TRP N CA sing N N 306
TRP N H sing N N 307
TRP N H2 sing N N 308
TRP CA C sing N N 309
TRP CA CB sing N N 310
TRP CA HA sing N N 311
TRP C O doub N N 312
TRP C OXT sing N N 313
TRP CB CG sing N N 314
TRP CB HB2 sing N N 315
TRP CB HB3 sing N N 316
TRP CG CD1 doub Y N 317
TRP CG CD2 sing Y N 318
TRP CD1 NE1 sing Y N 319
TRP CD1 HD1 sing N N 320
TRP CD2 CE2 doub Y N 321
TRP CD2 CE3 sing Y N 322
TRP NE1 CE2 sing Y N 323
TRP NE1 HE1 sing N N 324
TRP CE2 CZ2 sing Y N 325
TRP CE3 CZ3 doub Y N 326
TRP CE3 HE3 sing N N 327
TRP CZ2 CH2 doub Y N 328
TRP CZ2 HZ2 sing N N 329
TRP CZ3 CH2 sing Y N 330
TRP CZ3 HZ3 sing N N 331
TRP CH2 HH2 sing N N 332
TRP OXT HXT sing N N 333
TYR N CA sing N N 334
TYR N H sing N N 335
TYR N H2 sing N N 336
TYR CA C sing N N 337
TYR CA CB sing N N 338
TYR CA HA sing N N 339
TYR C O doub N N 340
TYR C OXT sing N N 341
TYR CB CG sing N N 342
TYR CB HB2 sing N N 343
TYR CB HB3 sing N N 344
TYR CG CD1 doub Y N 345
TYR CG CD2 sing Y N 346
TYR CD1 CE1 sing Y N 347
TYR CD1 HD1 sing N N 348
TYR CD2 CE2 doub Y N 349
TYR CD2 HD2 sing N N 350
TYR CE1 CZ doub Y N 351
TYR CE1 HE1 sing N N 352
TYR CE2 CZ sing Y N 353
TYR CE2 HE2 sing N N 354
TYR CZ OH sing N N 355
TYR OH HH sing N N 356
TYR OXT HXT sing N N 357
VAL N CA sing N N 358
VAL N H sing N N 359
VAL N H2 sing N N 360
VAL CA C sing N N 361
VAL CA CB sing N N 362
VAL CA HA sing N N 363
VAL C O doub N N 364
VAL C OXT sing N N 365
VAL CB CG1 sing N N 366
VAL CB CG2 sing N N 367
VAL CB HB sing N N 368
VAL CG1 HG11 sing N N 369
VAL CG1 HG12 sing N N 370
VAL CG1 HG13 sing N N 371
VAL CG2 HG21 sing N N 372
VAL CG2 HG22 sing N N 373
VAL CG2 HG23 sing N N 374
VAL OXT HXT sing N N 375
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
2 'UNKNOWN ATOM OR ION' UNX
3 water HOH
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 1X23
_pdbx_initial_refinement_model.details ?
#