HEADER    APOPTOSIS                               16-SEP-05   2B1W              
TITLE     SOLUTION STRUCTURE OF THE NOD1 CASPASE ACTIVATING AND RECRUITMENT     
TITLE    2 DOMAIN                                                               
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: CASPASE RECRUITMENT DOMAIN PROTEIN 4;                      
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: CARD;                                                      
COMPND   5 SYNONYM: NOD1 PROTEIN;                                               
COMPND   6 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: CARD4;                                                         
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21 STAR (DE3);                           
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PETM-11                                   
KEYWDS    CARD4, SIX-HELIX BUNDLE, CASPASE RECRUITMENT DOMAIN, INFLAMMATION,    
KEYWDS   2 NF-KB, GREEK KEY, APOPTOSIS                                          
EXPDTA    SOLUTION NMR                                                          
NUMMDL    10                                                                    
AUTHOR    F.MANON,A.FAVIER,J.P.SIMORRE,S.CUSACK                                 
REVDAT   5   01-MAY-24 2B1W    1       REMARK                                   
REVDAT   4   26-FEB-20 2B1W    1       SEQADV                                   
REVDAT   3   05-OCT-11 2B1W    1       VERSN  JRNL   REMARK                     
REVDAT   2   24-FEB-09 2B1W    1       VERSN                                    
REVDAT   1   26-SEP-06 2B1W    0                                                
JRNL        AUTH   F.MANON,A.FAVIER,G.NUNEZ,J.P.SIMORRE,S.CUSACK                
JRNL        TITL   SOLUTION STRUCTURE OF NOD1 CARD AND MUTATIONAL ANALYSIS OF   
JRNL        TITL 2 ITS INTERACTION WITH THE CARD OF DOWNSTREAM KINASE RICK.     
JRNL        REF    J.MOL.BIOL.                   V. 365   160 2007              
JRNL        REFN                   ISSN 0022-2836                               
JRNL        PMID   17054981                                                     
JRNL        DOI    10.1016/J.JMB.2006.09.067                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : NMRPIPE 2.3, ARIA 2.0                                
REMARK   3   AUTHORS     : F.DELAGLIO, S.GRZESIEK, G.W.VUISTER, G.ZHU,          
REMARK   3                 J.PFEIFER, A.BAX (NMRPIPE), M.HABECK, W.RIEPING,     
REMARK   3                 J.P.LINGE, M.NILGES (ARIA)                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2B1W COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-SEP-05.                  
REMARK 100 THE DEPOSITION ID IS D_1000034572.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 303                                
REMARK 210  PH                             : 7                                  
REMARK 210  IONIC STRENGTH                 : 100MM NACL                         
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 1.4MM NOD1 CARD 15N, 13C; 25MM     
REMARK 210                                   PHOSPHATE BUFFER NA; 100MM NACL,   
REMARK 210                                   5MM DTT; 95% H2O, 5% D2O; 1.4MM    
REMARK 210                                   NOD1 CARD 15N; 25MM PHOSPHATE      
REMARK 210                                   BUFFER NA; 100MM NACL, 5MM DTT;    
REMARK 210                                   95% H2O, 5% D2O                    
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 3D_13C-SEPARATED_NOESY; 3D_15N     
REMARK 210                                   -SEPARATED_NOESY; 3D METHYL        
REMARK 210                                   SELECTED NOESY-HSQC                
REMARK 210  SPECTROMETER FIELD STRENGTH    : 800 MHZ; 600 MHZ                   
REMARK 210  SPECTROMETER MODEL             : INOVA                              
REMARK 210  SPECTROMETER MANUFACTURER      : VARIAN                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : VNMR 6.1C, CNS 1.1, ARIA 2.0,      
REMARK 210                                   NMRDRAW 2.3                        
REMARK 210   METHOD USED                   : SIMULATED ANNEALING, TORSION       
REMARK 210                                   ANGLE DYNAMICS, REFINEMENT IN      
REMARK 210                                   EXPLICIT WATER                     
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 1000                               
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 10                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LOWEST         
REMARK 210                                   ENERGY                             
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;                   
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                            
REMARK 465   MODELS 1-10                                                        
REMARK 465     RES C SSSEQI                                                     
REMARK 465     PRO A   111                                                      
REMARK 465     SER A   112                                                      
REMARK 465     LEU A   113                                                      
REMARK 465     LEU A   114                                                      
REMARK 465     THR A   115                                                      
REMARK 465     GLN A   116                                                      
REMARK 465     SER A   117                                                      
REMARK 465     LYS A   118                                                      
REMARK 465     VAL A   119                                                      
REMARK 465     VAL A   120                                                      
REMARK 465     VAL A   121                                                      
REMARK 465     ASN A   122                                                      
REMARK 465     THR A   123                                                      
REMARK 465     ASP A   124                                                      
REMARK 465     PRO A   125                                                      
REMARK 465     VAL A   126                                                      
REMARK 465     SER A   127                                                      
REMARK 465     ARG A   128                                                      
REMARK 465     TYR A   129                                                      
REMARK 465     THR A   130                                                      
REMARK 465     GLN A   131                                                      
REMARK 465     GLN A   132                                                      
REMARK 465     LEU A   133                                                      
REMARK 465     ARG A   134                                                      
REMARK 465     HIS A   135                                                      
REMARK 465     HIS A   136                                                      
REMARK 465     LEU A   137                                                      
REMARK 465     GLY A   138                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   HE1  PHE A    50     HZ2  LYS A    70              1.25            
REMARK 500   HG2  GLN A    91     HG2  GLN A    92              1.25            
REMARK 500  HG21  VAL A    75     H    GLY A    79              1.27            
REMARK 500   HB   VAL A    58     HD3  LYS A    67              1.32            
REMARK 500  HE21  GLN A    91    HE21  GLN A    92              1.35            
REMARK 500   O    PRO A    62     HG1  THR A    63              1.60            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 GLU A  15      -99.80     47.59                                   
REMARK 500  1 PRO A  18      -76.11    -89.85                                   
REMARK 500  1 ASN A  26       42.54   -100.87                                   
REMARK 500  1 ILE A  34      -70.76   -171.06                                   
REMARK 500  1 ARG A  35      -51.84   -123.79                                   
REMARK 500  1 ASN A  36      -48.85     70.37                                   
REMARK 500  1 TYR A  49      -15.03   -169.00                                   
REMARK 500  1 PHE A  50       43.74    -76.36                                   
REMARK 500  1 CYS A  61      -69.19   -108.21                                   
REMARK 500  1 THR A  63     -176.41     54.19                                   
REMARK 500  1 GLN A  76      -22.76     67.74                                   
REMARK 500  1 SER A  77      -72.24   -135.06                                   
REMARK 500  1 GLN A  92       91.56    157.28                                   
REMARK 500  2 ALA A  13      -69.76   -121.63                                   
REMARK 500  2 MET A  14       56.60   -151.89                                   
REMARK 500  2 SER A  16      -68.26   -141.07                                   
REMARK 500  2 HIS A  17       67.69   -152.95                                   
REMARK 500  2 ILE A  34      -52.97   -150.31                                   
REMARK 500  2 ARG A  35      -28.34    172.94                                   
REMARK 500  2 ASN A  36      -28.01     78.04                                   
REMARK 500  2 TYR A  49      -15.83   -175.95                                   
REMARK 500  2 PHE A  50       37.44    -75.30                                   
REMARK 500  2 THR A  63     -178.13     57.52                                   
REMARK 500  2 GLN A  76      -41.65     81.34                                   
REMARK 500  2 SER A  77      -44.53   -142.21                                   
REMARK 500  2 GLN A  92       78.57    163.16                                   
REMARK 500  3 MET A  14      -33.63     72.30                                   
REMARK 500  3 GLU A  15      -90.51     61.88                                   
REMARK 500  3 SER A  16       32.06   -152.16                                   
REMARK 500  3 HIS A  17       67.67     61.56                                   
REMARK 500  3 PRO A  18      -91.28    -76.60                                   
REMARK 500  3 ILE A  34      -66.66   -139.67                                   
REMARK 500  3 ARG A  35      -39.63   -137.20                                   
REMARK 500  3 ASN A  36      -46.67     71.66                                   
REMARK 500  3 TYR A  49      -20.10   -171.92                                   
REMARK 500  3 PHE A  50       27.66    -75.64                                   
REMARK 500  3 CYS A  61      -65.46   -105.54                                   
REMARK 500  3 THR A  63     -177.61     56.39                                   
REMARK 500  3 GLN A  76      -12.47     67.01                                   
REMARK 500  3 SER A  77      -68.78   -147.53                                   
REMARK 500  3 LYS A  78       47.47    -81.06                                   
REMARK 500  3 GLN A  92       89.61    160.05                                   
REMARK 500  3 PHE A 109      111.63     70.53                                   
REMARK 500  4 SER A  16      -83.96   -139.25                                   
REMARK 500  4 ILE A  34      -63.71   -149.26                                   
REMARK 500  4 ARG A  35      -25.57   -149.85                                   
REMARK 500  4 ASN A  36      -48.38     74.38                                   
REMARK 500  4 TYR A  49      -20.59   -169.80                                   
REMARK 500  4 CYS A  61      -63.45   -103.76                                   
REMARK 500  4 THR A  63      177.11     54.40                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     114 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 6843   RELATED DB: BMRB                                  
DBREF  2B1W A   15   138  UNP    Q9Y239   CARD4_HUMAN     15    138             
SEQADV 2B1W GLY A   12  UNP  Q9Y239              EXPRESSION TAG                 
SEQADV 2B1W ALA A   13  UNP  Q9Y239              EXPRESSION TAG                 
SEQADV 2B1W MET A   14  UNP  Q9Y239              EXPRESSION TAG                 
SEQRES   1 A  127  GLY ALA MET GLU SER HIS PRO HIS ILE GLN LEU LEU LYS          
SEQRES   2 A  127  SER ASN ARG GLU LEU LEU VAL THR HIS ILE ARG ASN THR          
SEQRES   3 A  127  GLN CYS LEU VAL ASP ASN LEU LEU LYS ASN ASP TYR PHE          
SEQRES   4 A  127  SER ALA GLU ASP ALA GLU ILE VAL CYS ALA CYS PRO THR          
SEQRES   5 A  127  GLN PRO ASP LYS VAL ARG LYS ILE LEU ASP LEU VAL GLN          
SEQRES   6 A  127  SER LYS GLY GLU GLU VAL SER GLU PHE PHE LEU TYR LEU          
SEQRES   7 A  127  LEU GLN GLN LEU ALA ASP ALA TYR VAL ASP LEU ARG PRO          
SEQRES   8 A  127  TRP LEU LEU GLU ILE GLY PHE SER PRO SER LEU LEU THR          
SEQRES   9 A  127  GLN SER LYS VAL VAL VAL ASN THR ASP PRO VAL SER ARG          
SEQRES  10 A  127  TYR THR GLN GLN LEU ARG HIS HIS LEU GLY                      
HELIX    1   1 PRO A   18  ASN A   26  1                                   9    
HELIX    2   2 ASN A   26  ILE A   34  1                                   9    
HELIX    3   3 THR A   37  ASP A   48  1                                  12    
HELIX    4   4 SER A   51  ALA A   60  1                                  10    
HELIX    5   5 PRO A   62  GLN A   76  1                                  15    
HELIX    6   6 SER A   77  GLN A   92  1                                  16    
HELIX    7   7 GLN A   92  GLY A  108  1                                  17    
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
MODEL        1